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Max Koppers

@maxkoppers.bsky.social
906 followers 725 following 10 posts

Axonal mRNA trafficking and local translation | Group leader FGA/CNCR/VU Amsterdam | father of two

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Reposted by Max Koppers
Matthew Taliaferro @jmtali.bsky.social · 11/06/2026
New paper! How do RNAs "know" where to go inside a cell? We dug into the sequence elements that route RNAs to the right place. It turns out that, in mammals, they're surprisingly massive (>200 nt), multipartite, and wonderfully complicated. 🧵
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Oliver Harschnitz @harschnitz.bsky.social · 02/05/2026
Come and join our team @humantechnopole.bsky.social! We are recruiting a Senior Technician. You will be part of a collaborative and diverse team working on human stem cell biology, precise genome-engineering, and virology. More info: careers.humantechnopole.it/job/Senior-T... Please share.
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Sarah Cohen @cohenlaboratory.bsky.social · 16/02/2026
Cells come in many shapes and sizes, with diverse physiological functions. But how do #organelles and their interaction networks remodel during #differentiation of stem cells into different cell types? Here’s what we discovered about neuronal differentiation: 1/13
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bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 27/01/2026
Active transport of tRNAs facilitates distributed protein synthesis www.biorxiv.org/content/10.64898/20…
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Nicolas Panayotis @npanayotis.bsky.social · 20/01/2026
Very happy to share our new paper in #ScienceSignaling revealing that importin β1 isn’t just important for nuclear transport or neuronal growth. We now show it is key for presynaptic plasticity in the hippocampus, local translation, and memory! www.science.org/doi/10.1126/...
science.org
Subcellular depletion of importin β1 impairs presynaptic local translation and spatial memory
Axonal localization of importin β1 is required for presynaptic functions that support spatial memory tasks.
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Angelika Harbauer @harbauerlab.bsky.social · 15/01/2026
New preprint from my lab!!! We took advantage of the MitoTag mouse line to study what mRNAs associate with mitochondria in axons in vivo, and we were in for a surprise! Other than our favorite Pink1, mainly cytoskeletal mRNAs hitch a ride and pave the way for axon growth. shorturl.at/rYe1U
shorturl.at
Mitochondrial hitch-hiking of Mapt mRNA maintains Tau levels in axons
Hitch-hiking of transcripts on organelles, including mitochondria, has emerged as a common pathway to transport mRNAs into the axon to enable their local translation. However, the extent of mitochondr...
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Max Koppers @maxkoppers.bsky.social · 04/01/2026
Dynamic subtype- and context-specific subcellular RNA regulation in growth cones of developing neurons in the cerebral cortex. rdcu.be/eXuwg
rdcu.be
Dynamic subtype- and context-specific subcellular RNA regulation in growth cones of developing neurons of the cerebral cortex
Nature Neuroscience - Distinct neuron subtypes compartmentalize specific functions by differentially localizing and translating specific RNAs. This work identifies dynamic subtype- and...
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Cell Biology J-Club @cellclub.bsky.social · 05/11/2025
Secretome translation shaped by lysosomes and lunapark-marked ER junctions www.nature.com/articles/s41...
nature.com
Secretome translation shaped by lysosomes and lunapark-marked ER junctions - Nature
Live-cell imaging of mRNA encoding secretome proteins and translated nascent peptide markers show that secretome translation occurs at endoplasmic reticulum junctions near lysosomes, requires lun...
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bioRxivpreprint @biorxivpreprint.bsky.social · 29/10/2025
Neuronal compartmentalization results in impoverished axonal mitochondria www.biorxiv.org/content/10.1101/202…
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Debby Silver @debbysilver.bsky.social · 10/10/2025
I am thrilled to share our latest story led by the incredibly talented Brooke D’Arcy and Camila Musso. We discover a rich world of local gene expression in radial glia, essential neural and glial precursors, and develop a new method for sub-cellular mRNA manipulation. www.biorxiv.org/content/10.1...
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John Ngo @johntngo.bsky.social · 22/09/2025
🚀 Our new paper is out @natmethods.nature.com! Kuffer & Marzilli engineered conditionally stable MS2 & PP7 coat proteins (dMCP & dPCP) that degrade unless bound to RNA, enabling ultra–low-background, single-mRNA imaging in live cells. 🔗 www.nature.com/articles/s41... 🧬 www.addgene.org/John_Ngo/
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Andreas Prokop @poppi62.bsky.social · 14/09/2025
Wow, this paper provides crucial understanding of local translation and processing of transmembrane proteins in axons, one of the big mysteries that have haunted the field for a long time!!!!!!!! Fantastic!!!!!!!! Nguyen et al., 2025, bioRxiv 2025.09.09.674816ff. -- doi.org/10.1101/2025...
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Julia Schaeffer | Axon regulation and regrowth lab @axonreg2lab.bsky.social · 11/09/2025
✨ Post-doc opportunity in axon biology, funded by #ATIP-Avenir! 👀 We are looking for an enthusiastic post-doc to join our team at @ibdm.bsky.social to explore translation dynamics in axon regrowth, using live imaging approaches. Apply at: emploi.cnrs.fr/Offres/CDD/U... Thank you for sharing! 👋 🙏
emploi.cnrs.fr
Portail Emploi CNRS - Offre d'emploi - Post-doctoral researcher in axon biology (M/F)
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Ha Nguyen @hanguyen07.bsky.social · 10/09/2025
Excited to share our preprint, now available online on BioRxiv! biorxiv.org/content/10.1.... We uncovered the coupling of translation and secretion machineries at the #axonalER to promote local delivery of axonal transmembrane proteins (TMPs) to the plasma membrane.
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Jingchuan Luo @jingchuanluo.bsky.social · 27/08/2025
I'm thrilled to share our work from @weissmanlab.bsky.social (www.sciencedirect.com/science/arti...). We developed LOCL-TL, an optogenetic approach for monitoring localized translation in mammalian cells. LOCL-TL revealed two distinct strategies for mitochondrially localized translation.
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Max Koppers @maxkoppers.bsky.social · 03/08/2025
www.pnas.org/doi/10.1073/...
pnas.org
Neuronal processes contain the essential components for the late steps of ribosome biogenesis | PNAS
Neurons rely on spatial and temporal control of protein synthesis to respond rapidly and locally to external stimuli, a process facilitated by the ...
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bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 02/08/2025
Cryo-EM structures of Egl-BicD-RNA complexes reveal how diverse mRNAs are selected for subcellular localization www.biorxiv.org/content/10.1101/202…
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Shane Herbert @shaneherbert.bsky.social · 01/08/2025
If you’ve ever wondered how cells tune positioning of organelles in response to cell shape change, and what happens when this goes wrong, please check out our new manuscript – mRNA trafficking controls cell-size-scaled organelle dynamics! www.nature.com/articles/s41...
nature.com
mRNA trafficking directs cell-size-scaling of mitochondria distribution and function - Nature Communications
How mitochondria positioning dynamically adapts to changes in cell shape is poorly understood. Here, Bradbury et al. show that cell-size-dependent trafficking of TRAK2 mRNA underpins the cell-size-sca...
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@NicoliLab @nicolilab.bsky.social · 26/07/2025
RNA can control cell migration by acting at focal adhesions www.lifescienceeditors.com/2025/06/24/r...
lifescienceeditors.com
RNA can control cell migration by acting at focal adhesions - Scientific editing and writing experts - Life Science Editors
Scientific editing and writing experts for manuscripts and grants
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Hana Polasek-Sedlackova @hanasedlackova.bsky.social · 23/07/2025
📢 For all HaloTag lovers💙💚💛❤️💜🩶 we are excited to share that our work, in which we developed a new biotin-HaloTag ligand, is now published in @jcb.org! Full link here: rupress.org/jcb/article-...
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Molecular Cell @cp-molcell.bsky.social · 10/07/2025
Online Now: FMRP drives mRNP targets into translationally silenced complexes Online now:
dlvr.it
FMRP drives mRNP targets into translationally silenced complexes
Translational repression by FMRP has been attributed primarily to ribosome stalling. We show that FMRP sequesters its target mRNAs from translation initiation. FMRP binds not only to the transcript body but also directly to cap-bound eIF4E and poly(A)-tail-bound PABPC1. Through binding these two proteins, FMRP protects its target mRNAs from translation and decay.
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Julia Schaeffer | Axon regulation and regrowth lab @axonreg2lab.bsky.social · 12/07/2025
Kicking off the lab BlueSky with this picture of a happy hairy growing #axon! Looking forward to connecting with science chats and to growing research ideas 🧠🔬✨
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Evelina Tutucci @anilevetu.bsky.social · 08/07/2025
Optogenetic storage and release of protein and mRNA in live cells and animals | Nature Communications share.google/gz8nYXZ3hUVh... #spatialbiology #imagingtools #fluorescencemicroscopy
share.google
Optogenetic storage and release of protein and mRNA in live cells and animals - Nature Communications
Spatiotemporal control of biomolecules is a key challenge in cell biology. Here, authors introduce RELISR, an optogenetic condensate system enabling reversible, light-dependent sequestration and relea...
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Dave Shechner @shechnerlab.bsky.social · 30/06/2025
Hello! Ever wonder what's "talking to" your favorite transcript, but were too scared to ask? In our review in @cp-cellreports.bsky.social, @mardakheh.bsky.social and I highlight new RNA-focused tools for discovering RNA interactions across organizational scales. Checkit! tinyurl.com/ydn6e3ac
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eLife @elife.bsky.social · 04/06/2025
Researchers have found that turning down a single gene, EMC10, can boost memory and brain function in mice with a genetic condition linked to #schizophrenia. The findings offer hope for future treatments for 22q11.2 deletion syndrome.
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Targeting 22q11.2 deletion syndrome
Gene-targeting molecules known as antisense oligonucleotides help improve cognitive function in mouse models of a severe chromosomal disorder.
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Max Koppers @maxkoppers.bsky.social · 01/06/2025
Neuronal potassium channel activity triggers initiation of mRNA translation through binding of translation regulators. www.science.org/doi/10.1126/...
science.org
Neuronal potassium channel activity triggers initiation of mRNA translation through binding of translation regulators
Activated Slack potassium channels bind translation regulators to stimulate translation of cortical β-actin mRNA.
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Max Koppers @maxkoppers.bsky.social · 22/05/2025
Programmable control of spatial transcriptome in live cells and neurons. www.nature.com/articles/s41...
nature.com
Programmable control of spatial transcriptome in live cells and neurons - Nature
CRISPR-TO, a system for programmable control of spatial localization of cellular RNAs, is presented and enables functional investigation of endogenous RNA localization in diverse living cells.
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Mike Fainzilber @mfainzilber.bsky.social · 16/05/2025
A 🧵 to walk those interested through this paper...
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Journal of Cell Biology @jcb.org · 12/05/2025
Murphy et al. @amsterdamumc.bsky.social show that MUNC13 is essential for dense core vesicle secretion, while RIM prevents MUNC13 degradation. Key membrane-binding domains of RIM & MUNC13 play differing roles, revealing distinct mechanisms from synaptic vesicle release. rupress.org/jcb/article/...
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brangwynnelab.bsky.social @brangwynnelab.bsky.social · 21/04/2025
What drives cytoplasmic mRNA organization? We created unbiased, genome-wide maps of mesoscale RNA-RNA spatial proximity, revealing impact of encoded protein function. Fantastic work from @lindsayabecker.bsky.social @sofiquinodoz.bsky.social @davidaknowles.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Genome-wide mapping of mesoscale neuronal RNA organization and condensation
Subcellular RNA organization can affect critical cellular functions. However, our understanding of RNA microenvironments, particularly biomolecular condensates, remains limited, largely due to a lack ...
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Eugenio F. Fornasiero @forna.bsky.social · 22/04/2025
Excited for our latest work! We developed nanobinders for the luminal domain of Synaptotagmin 1 (calcium sensor for synaptic vesicles). Thanks among others to @verstrekenlab.bsky.social @opazo.bsky.social @meunierlab.bsky.social @volkerhaucke-lab.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Nanobinders for Synaptotagmin 1 enable the analysis of synaptic vesicle dynamics in rodent and human models.
Synaptic neurotransmission is a critical hallmark of brain activity and one of the first processes to be affected in neural diseases. Monitoring this process, and in particular synaptic vesicle recycl...
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Tom Gillingwater @tomgillingwater.bsky.social · 15/04/2025
In getting too excited about the front cover, I forgot to link to the actual paper 🤦‍♂️ Here it is: Dynamic modulation of the motor neuron translatome during developmental synapse elimination | Science Signaling www.science.org/doi/10.1126/...
science.org
Dynamic modulation of the motor neuron translatome during developmental synapse elimination
Superfluous axons are removed from muscle fibers through temporal changes in mRNA translation.
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Evelina Tutucci @anilevetu.bsky.social · 12/04/2025
www.biorxiv.org/content/10.1...
biorxiv.org
Perturbing RNA localization for functional study in neurons
Spatial RNA organization plays a pivotal role in diverse cellular processes and diseases, but the functional implications of spatial RNA localization remain underexplored. We present CRISPR-mediated t...
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Olivier Duss @olivierduss.bsky.social · 12/04/2025
Ever wondered how several individual RBPs cooperate to repress translation? Lead by @marcopayr.bsky.social and in great collaboration with @hennig-lab.bsky.social, we simultaneously tracked the binding of several proteins to single mRNA molecules in real-time! www.biorxiv.org/content/10.1...
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Luke Lavis @rhodamine110.bsky.social · 01/04/2025
Honored to help enable two back-to-back papers in @natureneuro.bsky.social; first DELTA www.nature.com/articles/s41... with collaborators at @hhmijanelia.bsky.social and then EPSILON www.nature.com/articles/s41... with @adamezracohen.bsky.social; @dyerfulchymist.bsky.social is always in the mix!
nature.com
DELTA: a method for brain-wide measurement of synaptic protein turnover reveals localized plasticity during learning - Nature Neuroscience
Researchers developed DELTA, a method for brain-wide measurement of synaptic protein turnover with single-synapse resolution, providing a powerful tool to localize and study mechanisms underlying syna...
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Iain Cheeseman @iaincheeseman.bsky.social · 28/03/2025
It's out! www.biorxiv.org/content/10.1...
biorxiv.org
Alternative start codon selection shapes mitochondrial function during evolution, homeostasis, and disease
Mitochondrial endosymbiosis was a pivotal event in eukaryotic evolution, requiring core proteins to adapt to function both within the mitochondria and in the host cell. Here, we systematically profile...
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Ryan Flynn @raflynn5.bsky.social · 26/03/2025
A nearly 9 year effort to design and implement new CLIP-based technologies to define multimeric protein assemblies on RNA. Enables ‘watching’ of RNP assemblies inside living cells Special congrats to Luca Ducoli, Brian Zarnegar, and Paul Khavari @nature.com www.nature.com/articles/s41...
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Amélie Freal @ameliefreal.bsky.social · 24/03/2025
We are recruiting!! If you are looking for a post-doc (ephys, slice imaging) or a PhD position (molecular neuroscience), are interested in Axon Initial Segment plasticity and want to join a nice team in a great environment, have a look! And, that's us 👇
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David Kuster @rnadavid.bsky.social · 23/03/2025
ANXA11 biomolecular condensates facilitate protein-lipid phase coupling on lysosomal membranes! Annexin A11 tethers RNP granules to membranes in a Ca2+ dependent manner. @abelljonny.bsky.social, @michael-e-ward.bsky.social, et al. www.nature.com/articles/s41...
nature.com
ANXA11 biomolecular condensates facilitate protein-lipid phase coupling on lysosomal membranes - Nature Communications
Nixon-Abell et al. show that ANXA11 condensation on lysosomal membranes causes a coupled phase transition of the underlying lipids and mechanical stiffening of the overall ensemble involved in RNP gra...
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Cell Biology J-Club @cellclub.bsky.social · 15/03/2025
Axonal RNA localization is essential for long-term memory www.nature.com/articles/s41...
nature.com
Axonal RNA localization is essential for long-term memory - Nature Communications
Axonal transcriptomes have been characterized, but their regulation and role in neuronal circuits remain unclear. Here authors uncover activity-dependent RNA localization in axons important for memory...
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RyanLab_TCD @ryanlab.bsky.social · 15/03/2025
Whoa - are a significant proportion of sporadic ALS/motor neuron disease cases a mitochondrial DNA disease?! #mitochondria www.nature.com/articles/s41...
nature.com
Mitochondrial respiratory complex IV deficiency recapitulates amyotrophic lateral sclerosis - Nature Neuroscience
Cheng et al. identify a mitochondrial complex IV (CIV) deficiency in the brains of patients with sporadic amyotrophic lateral sclerosis (ALS). They demonstrate that defects in mitochondrial CIV induce...
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Max Koppers @maxkoppers.bsky.social · 13/03/2025
The first review paper from our lab is out!! @viviennebauer.bsky.social discussed the rapidly emerging knowledge on (the interplay between multiple) organelles and neuronal mRNA localization. Hope you enjoy the read! www.sciencedirect.com/science/arti...
sciencedirect.com
Multi-organelle-mediated mRNA localization in neurons and links to disease
Brain function requires precise spatiotemporal regulation of the neuronal proteome. To allow adaptation of the proteome in distal outposts of neurons,…
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Pabi Sahoo @sahoolab.bsky.social · 28/02/2025
Our CNS regeneration work has now been published in @PNAS. It was a huge undertaking in collaboration with @Twiss @Benowitz @WardLab_Emory @KristyWelshhans @Marktuszynski @jenniferDulin @ArthurEnglish @JohnHolule labs. Thank you all, and @MerkinPnnrCtr, for funding. www.pnas.org/doi/10.1073/...
pnas.org
Disruption of G3BP1 granules promotes mammalian CNS and PNS axon regeneration | PNAS
Depletion or inhibition of core stress granule proteins, G3BP1 in mammals and TIAR-2 in Caenorhabditis elegans, increases the growth of spontaneous...
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Kurianlab @kurianlab.bsky.social · 07/03/2025
www.science.org/doi/10.1126/... Tour de force by Barna Lab
science.org
A subcellular map of translational machinery composition and regulation at the single-molecule level
Millions of ribosomes are packed within mammalian cells, yet we lack tools to visualize them in toto and characterize their subcellular composition. In this study, we present ribosome expansion micros...
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Mike Fainzilber @mfainzilber.bsky.social · 03/03/2025
New preprint from Roz Segal’s group on specialization in local axonal translation www.biorxiv.org/content/10.1...
biorxiv.org
Profiling local translatomes and RNA binding proteins of somatosensory neurons reveals specializations of individual axons
Individual neurons have one or more axons that often extend long distances and traverse multiple microenvironments. However, it is not known how the composition of individual axons is established or l...
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Matthew Taliaferro @jmtali.bsky.social · 03/03/2025
Excited to share our latest work! We asked if and how TDP-43 regulates RNA transport in neurons and if this is misregulated in ALS. We found that it works to keep RNAs *out* of neurites, and that loss of TDP-43 activity results in specific RNAs aberrantly accumulating there.
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Matthew Taliaferro @jmtali.bsky.social · 28/02/2025
Save the date for the next edition of this wonderful meeting. We look forward to seeing you in Portugal!!
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lchei.bsky.social @lchei.bsky.social · 27/02/2025
www.nature.com/articles/s41... POTATOMap is officially out today! (Even tho it says 2024Dec30… yeah long story😂) Thank you to all the authors and everyone involved! I hope we have provided something useful and maybe leave a little (just a little) impact in your research.
nature.com
Spatiotemporal proteomics reveals the biosynthetic lysosomal membrane protein interactome in neurons - Nature Communications
It is unclear how new lysosomal proteins are properly delivered in polarized neurons. Here, the authors developed a method combining the synchronization of protein release from the endoplasmic reticul...
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Max Koppers @maxkoppers.bsky.social · 26/02/2025
So cool! rdcu.be/eboxL
rdcu.be
Single-molecule live-cell RNA imaging with CRISPR–Csm
Nature Biotechnology - Single-molecule live-cell fluorescence in situ hybridization uses an RNA-targeting CRISPR–Csm complex to image and track endogenous RNAs.
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