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@NicoliLab

@nicolilab.bsky.social
776 followers 82 following 41 posts

RNA, Cell Biology, Zebrafish, Development Lovers

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Reposted by @NicoliLab
Rui Benedito @ruibenedito.bsky.social · 02/10/2026
Great GRC on Vascular Biology and Resilience !
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Reposted by @NicoliLab
Robert Arkowitz @robertarkowitz.bsky.social · 01/10/2026
www.biorxiv.org/content/10.6...
biorxiv.org
Declining ribosome function limits oocyte longevity
Protein synthesis declines with age across many tissues, but whether this decline actively contributes to physiological aging remains unclear. Oocytes may be particularly vulnerable because they rely ...
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Reposted by @NicoliLab
@NicoliLab @nicolilab.bsky.social · 09/09/2026
Did you know that vascular cells are remarkably resilient- constantly face and adapt to environmental perturbations! By learning how vascular cells build resilience, we may uncover new strategies to treat vascular disease! Excited to discuss new ideas at next #VCBGRC2027 JOIN US!! ❤️ #Resilience
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Reposted by @NicoliLab
Cell Biology J-Club @cellclub.bsky.social · 29/09/2026
Quantification of lipid sorting during clathrin-mediated endocytosis www.nature.com/articles/s41...
nature.com
Quantification of lipid sorting during clathrin-mediated endocytosis - Nature Cell Biology
Lennartz et al. evaluate lipid enrichment in clathrin-coated pits and observe that the differential lipid partitioning into clathrin-coated pits is largely driven by the lipid asymmetry of the plasma ...
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Reposted by @NicoliLab
@NicoliLab @nicolilab.bsky.social · 25/09/2026
GRC on Vascular Resilience- Registration is NOW OPEN! 🎉 We have available slots for abstract submissions to both the GRC and GRS, making this a great opportunity for trainees and junior faculty to share your groundbreaking research!! Come JOIN us- GRC on Vascular Resilience, Ventura, CA! 🌞🧬🫀
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Reposted by @NicoliLab
Robert Arkowitz @robertarkowitz.bsky.social · 27/09/2026
www.nature.com/articles/s41...
nature.com
Halting translation by the letter with sequence-selective small molecules - Nature Chemical Biology
Small-molecule modulators of protein synthesis are invaluable tools for dissecting the translation apparatus. This Review summarizes the mechanisms of molecules that disrupt translation in an amino ac...
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@NicoliLab @nicolilab.bsky.social · 25/09/2026
GRC on Vascular Resilience- Registration is NOW OPEN! 🎉 We have available slots for abstract submissions to both the GRC and GRS, making this a great opportunity for trainees and junior faculty to share your groundbreaking research!! Come JOIN us- GRC on Vascular Resilience, Ventura, CA! 🌞🧬🫀
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Reposted by @NicoliLab
Cell Press @cellpress.bsky.social · 21/09/2026
Save the date for @CellPressEvents Functional RNAs and join researchers from around the world to explore the latest advances in RNA biology, regulation, technology, and therapeutics. 📅 October 25–27, 2027 📍 Geneva, Switzerland 🔗 dlvr.it/TVZp9w #CPSRNAS2027
Save the date for Cell Press Symposia: Functional RNAs
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Reposted by @NicoliLab
Pablo J. Sáez @pjsaez.bsky.social · 18/09/2026
#Mechanobiology rules! Today, it's not only Chile's independence day🇨🇱😋 ...but also Sara Wickström @sarawickstrom.bsky.social is getting the Körber Prize 👏🏽👏🏽👏🏽 for being a "curiosity's junkie" 😂 Of note, Kate photobombing is top @katemiro.bsky.social @focalplane.bsky.social @koerber-ip.bsky.social
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Kurianlab @kurianlab.bsky.social · 10/09/2026
Wow
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Reposted by @NicoliLab
Kurianlab @kurianlab.bsky.social · 11/09/2026
www.biorxiv.org/content/10.6... check this from @osman-lab.bsky.social !
biorxiv.org
RNA-dependent association of the pyruvate dehydrogenase complex with mtDNA-containing assemblies supports mitochondrial translation
Mitochondrial DNA (mtDNA) encodes core subunits of the oxidative phosphorylation machinery, and its expression is spatially organized, with the genome packaged into nucleoids around which transcriptio...
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Reposted by @NicoliLab
Kate Cavanaugh @katecavanaugh.bsky.social · 10/09/2026
Absolutely ecstatic to share that WE GOT THE COVER!!! 🥹🎉 Seeing this on NCB's cover feels surreal. So much time, science, and teamwork went into this project, and I couldn’t be more excited to see it celebrated like this. A very, very happy day for this really really old and grown embryo 🐭🧫💥
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Reposted by @NicoliLab
Stefan Luschnig @luschnig.bsky.social · 09/09/2026
Interested in combining #Drosophila genetics, advanced imaging, and modeling to study inter-organ transport and epithelial dynamics? Apply now for #PhD position @uni-muenster.de, integrated in @sfb1348.bsky.social Graduate School. Learn more tinyurl.com/5n86bmsf and tinyurl.com/ypx74a5d
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@NicoliLab @nicolilab.bsky.social · 09/09/2026
Did you know that vascular cells are remarkably resilient- constantly face and adapt to environmental perturbations! By learning how vascular cells build resilience, we may uncover new strategies to treat vascular disease! Excited to discuss new ideas at next #VCBGRC2027 JOIN US!! ❤️ #Resilience
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Reposted by @NicoliLab
Nature Cell Biology @natcellbio.nature.com · 07/09/2026
☕ @anhhle2702.bsky.social @mayorlab.bsky.social & co show that in Xenopus embryos, local ectodermal tissue flows provide a directional cue that polarizes and guides embryonic myeloid cells migration via cell-on-cell interactions. www.nature.com/articles/s41...
nature.com
Tissue flow acts as a guidance cue for immune cell polarization and directional migration - Nature Cell Biology
Le et al. show that in Xenopus embryos, local ectodermal tissue flows provide a directional cue that polarizes and guides embryonic myeloid cells migration via cell-on-cell interactions.
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Reposted by @NicoliLab
Kurianlab @kurianlab.bsky.social · 06/09/2026
www.biorxiv.org/content/10.6... Check this
biorxiv.org
Declines in mRNA synthesis set the rate of organismal aging
The abundance of mRNA sets a ceiling on a cell’s capacity to produce protein and carry out its functions. Here, we describe a pathological decline in absolute mRNA abundance that occurs in most cell t...
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Reposted by @NicoliLab
Nature @nature.com · 04/09/2026
Nature research paper: Rewiring the ribosome to translate proteins encoded in its own RNA go.nature.com/46DfIc4
go.nature.com
Rewiring the ribosome to translate proteins encoded in its own RNA - Nature
Bacterial ribosomes can synthesize proteins encoded within their own RNA.
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Reposted by @NicoliLab
Robert Arkowitz @robertarkowitz.bsky.social · 05/09/2026
rupress.org/jcb/article/...
rupress.org
Spatiotemporal regulation of DNA repair proteins between Golgi and nucleus maintains genome stability
The Golgi is a well-established cytoplasmic hub, yet its coordination with the nucleus remains poorly understood. Systematic analysis of Golgi–nuclear prot
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Reposted by @NicoliLab
Nature Cell Biology @natcellbio.nature.com · 31/08/2026
☕This Review highlights advanced imaging methods and available biosensors that can be used to elucidate the composition and dynamics of membrane contact sites. 👉https://rdcu.be/4uDgJ3upkD1a www.nature.com/articles/s41...
nature.com
Advanced imaging of membrane contact sites - Nature Cell Biology
The detailed study of membrane contact sites is challenging owing to their small size and highly dynamic nature. This Review highlights advanced imaging methods and available biosensors that can be us...
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International Zebrafish Society @izfs.bsky.social · 31/08/2026
NEW Job Listing: Assistant Professor of Developmental Biology! Work for the University of California, San Diego in La Jolla, CA. For more information, view the job on our website here: izfs.org/jobboard/ame... #JobListing #AssistantProfessor #DevelopmentalBiology #UCSanDiego
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Nature @nature.com · 30/08/2026
Dolly Parton was an advocate for vaccines, public health, literacy and marginalized communities go.nature.com/4gwB0wA
go.nature.com
Dolly Parton dies aged 80 – researchers celebrate her contributions to science
Nature - The country singer was an advocate for vaccines, public health, literacy and marginalized communities.
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myosinactncrazy.bsky.social @myosinactncrazy.bsky.social · 30/08/2026
Microscale matrix defects suppress tension-dependent protrusions and stall collective cell migration: Cell Reports www.cell.com/cell-reports...
cell.com
Microscale matrix defects suppress tension-dependent protrusions and stall collective cell migration
Zmuda et al. show that microscale defects on soft collagen-IV stall epithelial migration via filopodial sensing and intercellular communication of cytoskeletal disruption. Stiffer matrices, switching ...
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Reposted by @NicoliLab
Robert Arkowitz @robertarkowitz.bsky.social · 30/08/2026
A transient RNP compartment boosts translation and growth of mammalian oocytes | Science Advances www.science.org/doi/10.1126/...
science.org
A transient RNP compartment boosts translation and growth of mammalian oocytes
Mammalian oocytes undergo an extended growth phase, during which transcription gradually declines. To sustain meiotic divisions and early embryonic development, growing oocytes must accumulate materna...
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Rubén Marín-Juez @rmarinjuez.bsky.social · 27/08/2026
🚨Thrilled to share our latest work is out!🚨 Ever wondered how epicardial activation regulates the immune response during cardiac regeneration? Yes? Check it out. No? Check it out anyway. 😉 Huge congrats to @gurrr.bsky.social and @gulsumkayman.bsky.social ! 🔗 link.springer.com/article/10.1...
link.springer.com
Sulf1 regulates inflammation via modulation of TGF-β dependent epicardial activation - EMBO Reports
Unlike adult humans, zebrafish can regenerate their hearts after injury. After cardiac injury, the epicardium is rapidly activated to contribute both signaling factors and progenitor cells that are es...
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@NicoliLab @nicolilab.bsky.social · 13/08/2026
What do we actually do in the Nicoli Lab? Here’s a glimpse into our science, our questions, and the people behind the work 🧬❤️🐟🩸 www.youtube.com/watch?v=CPmi...
youtube.com
The Endothelium, RNA, & Resilience - The Nicoli Lab at Yale School of Medicine
YouTube video by Yale Medicine
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Reposted by @NicoliLab
Laura Bianchi @laurafbianchi.bsky.social · 27/08/2026
Ever wondered how epithelial cells clear apoptotic cells while maintaining tissue cohesion?🍝🔗 Check our new paper in which we show that E-cadherin plays a dual role in regulating basal cortex dynamics upon phagocytosis while maintaining connected tissue organization www.nature.com/articles/s41...
nature.com
De novo E-cadherin/catenin complex formation controls basal epithelial mechanics and force transmission for apoptotic cell clearance - Nature Communications
Epithelial cells remodel their shape during phagocytosis while preserving tissue cohesion. Here, authors show that the E-cadherin/catenin adhesion complex is repurposed at phagocytic contacts, where i...
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Reposted by @NicoliLab
Cell Biology J-Club @cellclub.bsky.social · 26/08/2026
www.nature.com/articles/s41...
nature.com
The proportional scaling of mRNA and ribosome concentrations controls eukaryotic cell growth - Nature Cell Biology
Gao et al. show that yeast grow faster by proportionally increasing mRNA and ribosome concentrations to increase actively translating ribosomes, while elongation remains constant. A mass-action model ...
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@NicoliLab @nicolilab.bsky.social · 26/08/2026
I share this sadness. Dolly was unapologetically true to herself- so grateful for her and her support of research!
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Reposted by @NicoliLab
Kate Cavanaugh @katecavanaugh.bsky.social · 25/08/2026
🧵 What if one reason fertility declines with age isn’t just genetic-but mechanical? Thrilled to share our new paper in @NatureCellBio : Elevated contractility drives implantation failure in mouse embryos from aged females… here’s what we found 👇 www.nature.com/articles/s41... 1/11
nature.com
Elevated contractility drives implantation failure in mouse embryos from aged females - Nature Cell Biology
Cavanaugh et al. show that embryos from aged mice have increased contractility and tissue viscosity on embryonic day 4.5, which leads to poor spreading and attachment. Similar age-associated mechanica...
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Reposted by @NicoliLab
Cell Biology J-Club @cellclub.bsky.social · 25/08/2026
Substrate curvature and stiffness equivalence in governing cell mechanosensing www.nature.com/articles/s41...
nature.com
Substrate curvature and stiffness equivalence in governing cell mechanosensing - Nature Communications
This study reveals how cells translate substrate stiffness and curvature into biological responses through focal adhesion tilting, uncovering a mechanical equivalence that opens new routes for designi...
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Reposted by @NicoliLab
Science Magazine @science.org · 24/08/2026
New Science research in mice challenges a long-standing view of how the heart builds backup blood vessels after a coronary artery blockage, showing that new collateral arteries arise primarily from capillaries rather than existing arteries. Learn more: scim.ag/4xj0TqU
scim.ag
Tracing the origins of de novo coronary collateral formation in cardiac repair
Coronary collateral arteries have been proposed to form de novo through artery reassembly, a process in which arterial endothelial cells (ECs) migrate away from preexisting arteries and reassemble int...
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Reposted by @NicoliLab
Chris H. Hill @chillzaa.bsky.social · 24/08/2026
Thrilled to share that our paper describing protein-dependent frameshifting is now out in Molecular Cell @cellpress.bsky.social. Huge congratulations to @jemmabetts.bsky.social for publishing the first research paper from her PhD 🧬🧪🥳 www.sciencedirect.com/science/arti... 1/8
sciencedirect.com
A protein-dependent riboswitch activates ribosomal frameshifting in cardioviruses
Programmed −1 ribosomal frameshifting (PRF) is a translational control mechanism used by RNA viruses to regulate the relative abundance of proteins en…
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Campàs Lab @campaslab.bsky.social · 24/08/2026
Nice technology feature in @natmethods.nature.com on how physical measurements in embryos are changing how we understand development and morphogenesis www.nature.com/articles/s41...
nature.com
The physics of sculpting a living creature - Nature Methods
Cell biologists have long known that mechanical forces, such as tension and compression, influence tissue differentiation. Now, advanced methods are letting them observe and manipulate these forces in...
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Zebrafish Rock! @zebrafishrock.bsky.social · 22/08/2026
We discovered hidden gems by: @ritamateus.bsky.social (Developmental growth/Injury) www.biorxiv.org/content/10.6... @vlecaudey.bsky.social (Respiration/Hemodynamic forces) www.biorxiv.org/content/10.6... @mpownall.bsky.social (Chromatin organization) www.biorxiv.org/content/10.6... among others!
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Cell Biology J-Club @cellclub.bsky.social · 21/08/2026
journals.biologists.com/jcs/article/...
journals.biologists.com
Chronic stress disrupts the network among stress granules, P-bodies, and motor proteins
Stress granules (SGs) are dynamic RNA condensates that assemble rapidly in response to cellular stress following translational arrest, thereby promoting adaptation and influencing disease pathogenesis...
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Zebrafish Rock! @zebrafishrock.bsky.social · 21/08/2026
The Niethammer Lab does top-fin research 🐟🧬 Consider applying, if keen! Contact details: zfin.org/ZDB-PERS-131... #ZebrafishJobs
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@NicoliLab @nicolilab.bsky.social · 17/08/2026
🎉 It’s official! Vascular Cell Biology GRC 2027 is live!🎉 Join us January 10–15, 2027, in Ventura, California🌞 “Vascular Resilience: Mechanisms, Function, and Disease” Incredible group of scientists, many new ideas all focused on understanding how to build resilient blood vessels! 📢 PLEASE REPOST!📣
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Reposted by @NicoliLab
Kaska Koltowska @lymphaticslab.bsky.social · 20/08/2026
Proud to share our new paper in EMBO Reports! 🧬 How does a cell "decide" to become lymphatic vs blood endothelium? Turns out it's not just which genes switch on — it's how the genome folds around them. 💥 link.springer.com/content/pdf/... #Lymphatics #Zebrafish #DevBio #VascularBiology #Genomics
The topologically associating domains (TADs) and chromatin accessibility of lymphatic endothelial cells diverge from those of blood endothelial cells. These differences underlie the activation of LEC-specific regulatory networks governing cell identity and involving genes linked to lymphatic disease.
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Waggoner Lab @labwaggoner.bsky.social · 19/08/2026
RNA structures regulate norovirus life cycle and enable rational attenuation in vivo @cellcellpress.bsky.social www.cell.com/cell/fulltex... @yalepress.bsky.social @wilenlab.bsky.social
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Nature @nature.com · 19/08/2026
Lab meetings don’t always have to be so formulaic go.nature.com/4qnykGh
go.nature.com
Twenty-two easy ways to power up your lab meetings
Scientists share help and advice on how they got their research discussions flowing.
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@NicoliLab @nicolilab.bsky.social · 17/08/2026
🎉 It’s official! Vascular Cell Biology GRC 2027 is live!🎉 Join us January 10–15, 2027, in Ventura, California🌞 “Vascular Resilience: Mechanisms, Function, and Disease” Incredible group of scientists, many new ideas all focused on understanding how to build resilient blood vessels! 📢 PLEASE REPOST!📣
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Reposted by @NicoliLab
Mark Peifer (He, him) @peiferlabunc.bsky.social · 14/08/2026
Excited that this is now out in MBoC @ascbiology.bsky.social Check out our new insights into the subset of cell junction proteins in action in migrating mesenchymal cells. Open access PMC version is in line being processed 🧪 www.molbiolcell.org/doi/10.1091/...
Title, authors and abstract from link
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Reposted by @NicoliLab
Allison Kann @apkann.bsky.social · 12/08/2026
Part 1 of my postdoc work is officially published! 🥳 Hofstenia miamia has emerged as a new model system because of its ability to accomplish whole-body regeneration - but that also means that animals must be able to heal any type of wound. How do they do this? 🧵 1/13 www.nature.com/articles/s41...
nature.com
A flexible repertoire of wound closure strategies precedes whole-body regeneration - Nature Communications
Animals capable of whole-body regeneration can heal virtually any wound. Here they show that Hofstenia miamia accomplishes this feat through variable morphogenetic strategies that depend on which epit...
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Reposted by @NicoliLab
Robert Arkowitz @robertarkowitz.bsky.social · 15/08/2026
www.nature.com/articles/s41...
nature.com
Alternate RNA decoding results in stable and abundant proteins in mammals - Nature
Alternate RNA decoding, an understudied process, leads to peptide sequence modifications that can have substantial functional effects on protein stability, tissue-specific proteomes and dise...
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Reposted by @NicoliLab
Developmental Cell @cp-devcell.bsky.social · 13/08/2026
Online now: Systematic differences in protein stability underlie species-specific developmental tempo #biology #science
dlvr.it
Systematic differences in protein stability underlie species-specific developmental tempo
Using dynamic SILAC proteomics, Matsuda et al. show that protein degradation is globally slower in human than in mouse segmentation clock cells. Glycolysis inhibition in mouse partially phenocopies the human protein stability profile, linking metabolism, protein stability, and developmental tempo.
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@NicoliLab @nicolilab.bsky.social · 13/08/2026
What do we actually do in the Nicoli Lab? Here’s a glimpse into our science, our questions, and the people behind the work 🧬❤️🐟🩸 www.youtube.com/watch?v=CPmi...
youtube.com
The Endothelium, RNA, & Resilience - The Nicoli Lab at Yale School of Medicine
YouTube video by Yale Medicine
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Reposted by @NicoliLab
Cell Biology J-Club @cellclub.bsky.social · 12/08/2026
link.springer.com/article/10.1...
link.springer.com
Principles of ribosome-associated protein quality control during the synthesis of CFTR - The EMBO Journal
Prolonged translational arrests caused by defective mRNAs activate the ribosome-associated protein quality control (RQC) pathway, which marks harmful incomplete proteins for degradation. Multipass tra...
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Reposted by @NicoliLab
Matthew Taliaferro @jmtali.bsky.social · 12/08/2026
Excited to share our newest work! We asked whether RNA molecules need to be in a specific place in the cell to do their job. We found that a single RNA must reach the midbody, the structure that pinches two dividing cells apart, for cell division to finish efficiently. 🧵⬇️
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Developmental Cell @cp-devcell.bsky.social · 11/08/2026
Online now: Elongating human heart organoids recapitulate early cardiac morphogenesis and axial organization #biology #science
dlvr.it
Elongating human heart organoids recapitulate early cardiac morphogenesis and axial organization
Lee and Kim et al. generate elongating heart organoids (EHOs) from human induced pluripotent stem cells. EHOs undergo elongation and looping-like morphogenesis and establish venous-arterial axial patterning with venous pole-initiated contractile propagation. EHOs provide a human platform to study early cardiac morphogenesis and congenital heart disease.
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Robert Arkowitz @robertarkowitz.bsky.social · 12/08/2026
Cytoplasmic fluidity couples nutrient availability and enterocyte fate in vivo | PNAS www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
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