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lchei.bsky.social

@lchei.bsky.social
63 followers 133 following 3 posts

Lysosomes|Neuronal & Glia Organelle Biology|Protein Trafficking|Postdoc - Mikael Simons Lab|Cell Biology Enthusiast

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Reposted by @lchei.bsky.social
Cell Biology J-Club @cellclub.bsky.social · 29/09/2026
Quantification of lipid sorting during clathrin-mediated endocytosis www.nature.com/articles/s41...
nature.com
Quantification of lipid sorting during clathrin-mediated endocytosis - Nature Cell Biology
Lennartz et al. evaluate lipid enrichment in clathrin-coated pits and observe that the differential lipid partitioning into clathrin-coated pits is largely driven by the lipid asymmetry of the plasma ...
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Reposted by @lchei.bsky.social
Joyce Meiring @joycemeiri.bsky.social · 24/09/2026
Excited to share that our latest story on #microtubule conformation controlling cell #signaling is now out in NCB! We show that microtubule expansion by taxane chemotherapeutics releases microtubule bound GEF-H1 which in turn activates RhoA/ROCK signaling. ✨ www.nature.com/articles/s41...
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Sascha Pust @moerno.bsky.social · 15/09/2026
Our new publication in Nature Cell Biology 🔬 How cells reseal damaged lysosomes: Ca²⁺ leak → VPS34 makes PI3P on the ER → recruits DFCP1 → clusters VPS13C lipid-transfer bridges at ER–lysosome contacts to patch the membrane. No DFCP1 = failed repair. www.nature.com/articles/s41...
nature.com
DFCP1-containing ER microdomains mediate lysosomal membrane repair - Nature Cell Biology
Radulovic et al. show that phosphatidylinositol 3-phosphate (PI3P), produced by the phosphatidylinositol 3-kinase PIK3C3, is formed on ER domains after lysosome damage. ER domain PI3P helps to recruit...
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Reposted by @lchei.bsky.social
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 26/08/2026
TSPAN3 defines a distinct intracellular trafficking route to secretory multivesicular bodies www.biorxiv.org/content/10.64898/20…
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The EMBO Journal @embojournal.org · 23/06/2026
Assembly of organelle-acidifying V-ATPase by mammalian RAVE complexes responds to nutrient signaling and catabolic activity @wilhelmpalm.bsky.social and coworkers link.springer.com/article/10.1...
link.springer.com
mRAVE governs lysosomal catabolism through basal and mTORC1-regulated V-ATPase assembly - The EMBO Journal
Acidification of lysosomes, endosomes and the Golgi underpins organelle-specific functions within the endomembrane system. This process is driven by vacuolar-type H + -ATPases (V-ATPases), proton pump...
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Reposted by @lchei.bsky.social
bioRxiv Neuroscience @biorxiv-neursci.bsky.social · 20/06/2026
Spatiotemporal proteomics elucidates trafficking and localization of Neuroligins to the axon initial segment plasma membrane www.biorxiv.org/content/10.64898/20…
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Reposted by @lchei.bsky.social
Noortje Kersten @noortjekersten.bsky.social · 17/06/2026
Our manuscript on the role of the calsyntenin adaptors in biosynthetic axonal transport is on BioRxiv now: biorxiv.org/content/10.6... It was a pleasure to work on this with my colleague and friend Derk Draper. Special thanks to @judithklumperman.bsky.social and Ginny Farías for their support.
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Reposted by @lchei.bsky.social
Eugene Katrukha 🇺🇦 @ekatrukha.bsky.social · 16/06/2026
With a motivating push from @christlet.bsky.social I made a new Fiji plugin, CurveMorph. The idea was to create a tool for kymograph generation along the dynamic (bending/shaking) filament shapes (microtubules, cilia, neurites, etc). The logo was made using the plugin. github.com/UU-cellbiolo...
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Reposted by @lchei.bsky.social
Journal of Cell Biology @jcb.org · 29/05/2026
Wu and Hegde annotate and analyze the topology of 4,863 human endoplasmic reticulum–inserted membrane proteins and their 20,546 transmembrane domains, showing that transmembrane domains inserted by different pathways can tolerate different biophysical properties. rupress.org/jcb/article/...
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Reposted by @lchei.bsky.social
Spang Lab @spanglab.bsky.social · 29/05/2026
How to determine the proteome of cellular compartments? We established a method to do just that, published n @eLife.bsky.social: SPEx: Compartment-Resolved Proteomics via Expansion Microscopy–Guided Microdissection doi.org/10.7554/eLif...
doi.org
SPEx: Compartment-Resolved Proteomics via Expansion Microscopy–Guided Microdissection
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Reposted by @lchei.bsky.social
Cell Biology J-Club @cellclub.bsky.social · 27/05/2026
www.nature.com/articles/s41...
nature.com
A PI(3,5)P2/CHMP4B axis on lysosomes is essential for microautophagic degradation of STING - Nature Communications
Inhibition of Pikfyve, a kinase generating PI(3,5)P2, abolishes CHMP4B (an ESCRT-III subunit) recruitment to lysosomes, and leads to an accumulation of STING vesicles and sustained signaling. Our resu...
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Reposted by @lchei.bsky.social
Cell Biology J-Club @cellclub.bsky.social · 27/05/2026
link.springer.com/article/10.1...
link.springer.com
FAM134B-mediated ER-phagy degrades APP and suppresses Alzheimer’s disease pathology - The EMBO Journal
Endoplasmic reticulum autophagy (ER-phagy) is a selective autophagy pathway in which receptor proteins target ER membranes and proteins for degradation, yet its role in Alzheimer’s disease (AD) remain...
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Reposted by @lchei.bsky.social
Journal of Cell Biology @jcb.org · 26/05/2026
Saishree S. Iyer and Anna Akhmanova @utrechtuniversity.bsky.social review the mechanisms controlling plus-end elongation of centriolar and ciliary #microtubules, revealing shared principles. rupress.org/jcb/article/... #Centrioles #Cilia #Cytoskeleton
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Reposted by @lchei.bsky.social
Journal of Cell Biology @jcb.org · 21/05/2026
Chouhan, Phogat et al. of the Mahak Sharma lab report that the small GTP-binding protein Arl8b recruits the Rab11a GAP, TBC1D9B, to inactivate Rab11a-mediated recycling of newly synthesized LAMP1 and mediate its efficient sorting to #lysosomes. rupress.org/jcb/article/...
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Reposted by @lchei.bsky.social
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 20/05/2026
Acute lysosome repositioning reveals functional and proteomic adaptations www.biorxiv.org/content/10.64898/20…
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lchei.bsky.social @lchei.bsky.social · 14/05/2026
We wrote a short review article on the benefits, challenges and future prospects of studying protein trafficking with proximity labeling revolving recent technical advances. www.sciencedirect.com/science/arti...
sciencedirect.com
Always on the move: Mapping spatiotemporal interactome with proximity labeling in mammalian cells
Compartmentalization is central to coordinate complex biochemical processes in eukaryotic cells. Proteins governing organelle function and proteome co…
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Reposted by @lchei.bsky.social
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 30/03/2026
SPEx: Compartment-Resolved Proteomics via Expansion Microscopy-Guided Microdissection www.biorxiv.org/content/10.64898/20…
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Reposted by @lchei.bsky.social
Cell - a Cell Press journal @cp-cell.bsky.social · 22/01/2026
Now online! Cell-type resolved protein atlas of brain lysosomes identifies SLC45A1-associated disease as a lysosomal disorder
dlvr.it
Cell-type resolved protein atlas of brain lysosomes identifies SLC45A1-associated disease as a lysosomal disorder
This study describes the cell-type-specific lysosomal proteome across the major brain cell types and identifies SLC45A1 as a neuron-specific lysosomal sugar exporter linked to lysosomal storage disease.
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Reposted by @lchei.bsky.social
Jeremy Baskin @jeremybaskin.bsky.social · 07/01/2026
Thrilled to share our latest study, led by @reikatei.bsky.social, in @natchembio.nature.com! We began by asking a simple question—how do cells know if they have too much of a lipid in a particular membrane, and how do they respond to rectify this imbalance? www.nature.com/articles/s41... More info 👇
nature.com
Membrane editing with proximity labeling reveals regulators of lipid homeostasis - Nature Chemical Biology
Coupling an optogenetic lipid-modifying enzyme with proximity labeling reveals protein networks and mechanisms regulating lipid homeostasis in the membranes of target organelles.
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Reposted by @lchei.bsky.social
Paul & Virginie - Centriole Lab @centriolelab.bsky.social · 25/12/2025
A super detailed protocol + video on Cryo-ExM - Cryo-Expansion Microscopy, led by the labs of our former postdocs @marinelap.bsky.social & @ebertiaux.bsky.social. Clear, practical, and very useful for anyone doing nanoscale imaging 🚀 app.jove.com/t/68595/expa...
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Reposted by @lchei.bsky.social
Juan S. Bonifacino @juanbonifacino.bsky.social · 23/12/2025
Latest preprint from our lab reports that the distinct pH of anterograde (less acidic) and retrograde (more acidic) lysosomal vesicles in the axon depends on assembly of the V1 and V0 domains of the vacuolar H+ ATPase, mediated by the metazoan RAVE complex www.biorxiv.org/content/10.6...
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John Ngo @johntngo.bsky.social · 22/09/2025
🚀 Our new paper is out @natmethods.nature.com! Kuffer & Marzilli engineered conditionally stable MS2 & PP7 coat proteins (dMCP & dPCP) that degrade unless bound to RNA, enabling ultra–low-background, single-mRNA imaging in live cells. 🔗 www.nature.com/articles/s41... 🧬 www.addgene.org/John_Ngo/
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Cell Biology J-Club @cellclub.bsky.social · 10/09/2025
The axonal ER couples translation and secretion machineries for local delivery of axonal transmembrane proteins to promote axonal development www.biorxiv.org/content/10.1...
biorxiv.org
The axonal ER couples translation and secretion machineries for local delivery of axonal transmembrane proteins to promote axonal development
Proper neuronal development and function rely on the polarized sorting of transmembrane proteins (TMPs) to their distinct somatodendritic or axonal domains. Most TMPs follow a conventional secretory p...
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Reposted by @lchei.bsky.social
Andreas Prokop @poppi62.bsky.social · 14/09/2025
Wow, this paper provides crucial understanding of local translation and processing of transmembrane proteins in axons, one of the big mysteries that have haunted the field for a long time!!!!!!!! Fantastic!!!!!!!! Nguyen et al., 2025, bioRxiv 2025.09.09.674816ff. -- doi.org/10.1101/2025...
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Ha Nguyen @hanguyen07.bsky.social · 10/09/2025
Excited to share our preprint, now available online on BioRxiv! biorxiv.org/content/10.1.... We uncovered the coupling of translation and secretion machineries at the #axonalER to promote local delivery of axonal transmembrane proteins (TMPs) to the plasma membrane.
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bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 09/07/2025
The involvement of the ER-phagy receptor FAM134B in membrane contact sites between ER and endolysosomes promotes ERLAD www.biorxiv.org/content/10.1101/202…
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Reposted by @lchei.bsky.social
Max Koppers @maxkoppers.bsky.social · 13/03/2025
The first review paper from our lab is out!! @viviennebauer.bsky.social discussed the rapidly emerging knowledge on (the interplay between multiple) organelles and neuronal mRNA localization. Hope you enjoy the read! www.sciencedirect.com/science/arti...
sciencedirect.com
Multi-organelle-mediated mRNA localization in neurons and links to disease
Brain function requires precise spatiotemporal regulation of the neuronal proteome. To allow adaptation of the proteome in distal outposts of neurons,…
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lchei.bsky.social @lchei.bsky.social · 27/02/2025
www.nature.com/articles/s41... POTATOMap is officially out today! (Even tho it says 2024Dec30… yeah long story😂) Thank you to all the authors and everyone involved! I hope we have provided something useful and maybe leave a little (just a little) impact in your research.
nature.com
Spatiotemporal proteomics reveals the biosynthetic lysosomal membrane protein interactome in neurons - Nature Communications
It is unclear how new lysosomal proteins are properly delivered in polarized neurons. Here, the authors developed a method combining the synchronization of protein release from the endoplasmic reticul...
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