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Luis Bonet-Ponce

@lysoluis.bsky.social
569 followers 354 following 27 posts

Assistant Professor @OhioState in a toxic relationship with lysosomes. ECR Editor @MBoCjournal. Former @NIH. Views are my own. bonetponcelab.com

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Reposted by Luis Bonet-Ponce
Mathilda Lennartz @mathilda95.bsky.social · 30/09/2026
UPDATE!: I am absolutely stoked that the second paper of my PhD is now out in @natcellbio.nature.com :D. We combined lipid imaging, STED microscopy, and mathematical modelling in a super cool team effort to quantify lipid partitioning inside clathrin-coated pits. www.nature.com/articles/s41....
nature.com
Quantification of lipid sorting during clathrin-mediated endocytosis - Nature Cell Biology
Lennartz et al. evaluate lipid enrichment in clathrin-coated pits and observe that the differential lipid partitioning into clathrin-coated pits is largely driven by the lipid asymmetry of the plasma ...
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Giovanni D’Angelo @giodang.bsky.social · 23/09/2026
#lipidtime: It's a lipid universe. Today in Nature we publish the Lipid Brain Atlas, the first map of membrane lipid composition across the entire mouse brain, a layer of organisation that cell-type and transcript maps had left out. #lipidomics #neuroscience #BrainAtlas
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Fran Bottanelli @franbottanelli.bsky.social · 14/09/2026
#membranetrafficking seminars are back for the fall session! This Thursday two exciting talks from Roger Pons Lanau from @felixmendu.bsky.social lab and @veijosalo.bsky.social #ER #lipiddroplets and lots of wonderful imaging! From single molecules to cryo EM! Please repost
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Florey Lab @floreylab.bsky.social · 10/07/2026
Please check out our new preprint! We find an unexpected role for #CASM in regulating p62 mediated activation of the KEAP1/NRF2 pathway to initiate a cytoprotective antioxidant transcriptional response. More functions for #CASM in responding to lysosome stress. www.biorxiv.org/content/10.6... 1/2
biorxiv.org
CASM regulates p62/KEAP1/NRF2 antioxidant responses to lysosome damage
Effective lysosome function is essential for health, and declines with ageing and disease. Upon lysosome damage, cells mount a complex stress response to restore homeostasis. Membrane ATG8ylation play...
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Kirsty McMillan @mcmillanlab.bsky.social · 26/06/2026
Conference reminder! Abstract submission and early-bird registration to the 93rd Biochemical Society Harden Conference on "Endosomal-lysosomal network dysfunction in neurodegeneration" closes soon on the 1st July. Lots of speaker slots available from submitted abstracts so do come and join us!
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Roberto Zoncu Lab @robzonculab.bsky.social · 03/06/2026
Fantastic work by Aakriti Jain @aakritijain.bsky.social in team with Claire Goul and the Laboratory for Genome Research reveals the LASER pathway and its core component TFG as critical for rapid ESCRT-dependent lysosomal membrane repair, pointing to a deep connection with neurodegeneration!
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Jin Zhang Lab @jinzhanglab.bsky.social · 22/05/2026
New paper, new tool! 🚨 Where a signaling protein lives matters as much as what it does. Our new tool lets you interrogate this one compartment at a time. We built TerminaTOR, a genetically encodable inhibitor that silences mTORC1 at subcellular locations.
rdcu.be
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Peter Cullen @peterjcullen1.bsky.social · 21/05/2026
'Endosomal-lysosomal network dysfunction in neurodegeneration'. 13 speaker slots for selected posters. Session chair slots. Keynotes, Frances Platt + Volker Haucke. Colworth Medal Ben Ryskeldi-Falcon. Discussion panels + more. SUPER EARLY DEADLINE 1st JUNE 2026. www.eventsforce.net/biochemsoc/f...
eventsforce.net
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Peter Cullen @peterjcullen1.bsky.social · 21/05/2026
'Endosomal-lysosomal network dysfunction in neurodegeneration'. 13 speaker slots for selected posters. Session chair slots. Keynotes, Frances Platt + Volker Haucke. Colworth Medal Ben Ryskeldi-Falcon. Discussion panels + more. SUPER EARLY DEADLINE 1st JUNE 2026 www.eventsforce.net/biochemsoc/f...
eventsforce.net
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Carter Lab @carter-lab.bsky.social · 29/04/2026
New preprint from the lab, looking at how multiple different adaptors interact with dynein! Work led by @amicoennio.bsky.social. Available now on BioRxiv: doi.org/10.64898/202...
doi.org
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Ennio @amicoennio.bsky.social · 29/04/2026
New preprint! We asked a simple question: How do very different activating adaptors all activate dynein? Turns out: same architecture, wildly different implementations 🧵👇 doi.org/10.64898/202...
doi.org
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Prof Malú Gámez Tansey @malutansey.bsky.social · 28/04/2026
On behalf of #TeamTansey we will investigate the role of #immuneaging in the heterogeneity of #Parkinsons and look forward ending #Parkinsons at Indiana University School of Medicine #Neurology & Stark Neurosciences Research Institute with the continued support of ASAP & MJFF lnkd.in/gzRbb95R
lnkd.in
LinkedIn
This link will take you to a page that’s not on LinkedIn
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Luis Bonet-Ponce @lysoluis.bsky.social · 08/04/2026
My favorite paper in 2026 so far!! Absolutely stunning 🤩
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Max Gutierrez @maxgg.bsky.social · 31/03/2026
💥Our latest @embojournal.org on membrane damage and repair. Di @dichen02.bsky.social @crick.ac.uk found that calcium is a conserved signal for ATG8/LC3 lipidation on membranes using novel probes to record calcium leakage. Congratulations Di et al! link.springer.com/article/10.1...
link.springer.com
Ca²⁺ leakage is a conserved signal for non-canonical ATG8/LC3 lipidation and membrane repair - The EMBO Journal
Endomembrane damage of intracellular vesicles triggers signals that activate membrane repair in mammalian cells to restore homeostasis. However, the signals that drive diverse membrane repair recruitm...
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Claudio Bussi @claudiobussi.bsky.social · 26/03/2026
Glad to share our new @cp-trendscellbio.bsky.social article! We discuss how repair condensates and lipid domains work together to restore lysosome integrity or deciding if it's time for lysophagy. #Lysosomes #Condensates #DamageSignature #Lipids #Ions Check it out: doi.org/10.1016/j.tc...
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Luis Bonet-Ponce @lysoluis.bsky.social · 18/03/2026
Find someone that loves you as much as @dgershlick.bsky.social loves RUSH!! Congrats!!
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Luis Bonet-Ponce @lysoluis.bsky.social · 13/03/2026
Really excited for the upcoming 93rd Harden Conference on Endosomal–Lysosomal Network Dysfunction in Neurodegeneration. The speaker lineup is fantastic and very diverse across membrane trafficking, structural biology, and functional genetics! Especially encouraging ECRs to attend!
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Luis Bonet-Ponce @lysoluis.bsky.social · 21/02/2026
Quick proteomics question: we want to use an exogenous biotin blocking scavenger for a TurboID experiment. We tried Biolock but is very inconsistent in our hands. Does anyone have another suggestion?
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Sarah Cohen @cohenlaboratory.bsky.social · 16/02/2026
Cells come in many shapes and sizes, with diverse physiological functions. But how do #organelles and their interaction networks remodel during #differentiation of stem cells into different cell types? Here’s what we discovered about neuronal differentiation: 1/13
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Chih-Hsuan (Sherry) Hsu @sherryhsu.bsky.social · 17/02/2026
Thrilled to share that the first part of my PhD work from @cohenlaboratory.bsky.social lab is now on bioRxiv! www.biorxiv.org/content/10.6... Check out the threads below:
biorxiv.org
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Avezov lab @avezovlab.bsky.social · 13/02/2026
Our new paper's out: FidlTrack—structure-aware single-particle tracking benchmarks/boost SPT fidelity With it we resolve with sub-organelle res. e.g. BACE1 amyloidogenic APP cleavage #Alzheimers, ER exit events, map nanobody binding in realtime in ER/organelles 🔬🧠#SingleMolecule rdcu.be/e3Ris
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Jeremy Baskin @jeremybaskin.bsky.social · 06/02/2026
New paper in @jcb.org! We found a new regulator of p62 phase separation, autophagy, and antioxidant signaling. It is an E3 ligase adaptor called SHKBP1, but the effect is via direct p62 binding, not ubiquitination. Congrats to Lin Luan & team! @weillinstitute.bsky.social
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Andy Moore @aaandmoore.bsky.social · 05/02/2026
An intracellular meteor shower. EB3 comets tracking growing microtubule plus-ends in a cultured cell.
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Spang Lab @spanglab.bsky.social · 30/01/2026
Check out our newest findings on how #lysosomes are generated from #endolysosomes. Great work from @samit2104.bsky.social ! @biozentrum.unibas.ch , @unibas.ch #cellbio #cell #organelles Ca2+ and DRP1 drive endocytic lysosome reformation at tripartite contact sites www.biorxiv.org/content/10.6...
biorxiv.org
Ca2+ and DRP1 drive endocytic lysosome reformation at tripartite contact sites
Lysosomes are essential in maintaining cellular health. Endocytic lysosome reformation (ELR) regenerates functional lysosomes following degradation of endocytic cargo, yet the mechanisms driving this process remain largely unknown. Here, we define the molecular machinery underlying ELR. We find that unlike autophagic lysosome reformation (ALR), ELR proceeds independently of mTOR and dynamin 2, but requires the mitochondrial fission GTPase DRP1. DRP1 mediates scission of endolysosomal tubules at contact sites with the endoplasmic reticulum (ER) and mitochondria. Disruption of DRP1 function or ER endolysosome contact results in elongated tubules, indicating defective lysosome reformation. Moreover, mitochondrial activity is essential for tubule initiation, and Ca2+ transfer from endolysosomes to mitochondria is crucial for ELR onset. Our findings reveal a dual role for mitochondria in ELR: first in ELR initiation and second in DRP1-dependent tubule fission at ER-mitochondria-endolysosome tripartite contact sites, uncovering the previously unappreciated role of mitochondria in endolysosome remodeling and fission. ### Competing Interest Statement The authors have declared no competing interest. Swiss National Science Foundation, 320030-231859, 310030-197779 University of Basel, https://ror.org/02s6k3f65
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Soyon Hong @soyonhonglab.bsky.social · 28/01/2026
🙏🙏 to entire team esp co-lead Tim Bartels. So proud of @seppedeschepper.bsky.social brilliant first postdoc who now leads his own at VIB. 🙏🙏🙏to @chanzuckerberg.bsky.social for supporting the project from early pilot phase. Contact us if u want to explore next steps in PD gut/brain neuroimmunology!
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Teng-Leong Chew @scopeshifu.bsky.social · 28/01/2026
🧪 We are excited to share this novel open access paper on Phasor Mixing Coefficient to analyze colocalization, developed by folks @i2janelia.bsky.social and @aicjanelia.bsky.social. This is also the first technical paper jointly published with our sister imaging center @malacridalab.bsky.social!
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Levental Lab @leventallab.bsky.social · 24/01/2026
Excited to share a new story that transformed how we think about membrane domains in the ER! rdcu.be/eR7Cn ER exit sites mediated by the COPII adaptor sec24D selectively recruit lipid raft-preferencing proteins for rapid ER export Wondering what’s so new and exciting? Skytorial below! 1/9
rdcu.be
ER exit sites mediated by the COPII adaptor sec24D selectively recruit lipid raft-preferring proteins for rapid ER export
Nature Communications - Through synchronized cargo traffic experiments, the authors explore the role of raft partitioning in ER efflux. Raft-preferring cargos show specific preferences for ER exit...
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Yutong Zhang @zyt0329.bsky.social · 21/01/2026
Beyond thrilled to share my PhD work out today in @natcellbio.nature.com , uncovering a nanoscale acidic environment around lysosomes that controls their mobility through proton signaling.🥳🥳🥳 Great thanks to my advisors and excellent peers for helping me! www.nature.com/articles/s41...
nature.com
DNA nanodevices detect an acidic nanolayer on the lysosomal surface - Nature Cell Biology
Tan and colleagues develop DNA nanodevices to detect the pH of the lysosomal outer surface, observing an acidic layer generated by TMEM175 that regulates lysosome positioning in response to changes in...
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Wilfling Lab @wilflinglab.bsky.social · 20/01/2026
LLOMe has long been used to study lysosomal damage, yet how it works has remained a mystery. Using cryo-electron tomography, we show it forms amyloid structures inside lysosomes that mechanically rupture membranes – revealing a new paradigm for lysosomal failure. 🔗 doi.org/10.64898/202... #CryoET
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Gallego Lab @gallegolab.bsky.social · 16/01/2026
0/10 🥳 our #exocyst paper out in @cp-cell.bsky.social, led by Marta, Sebas & @sasmeek.bsky.social in collab with @jonasries.bsky.social, @cmanzo.bsky.social & Castaño-Díez labs #Quantitative_Cell_Biology Continuum architecture dynamics of vesicle tethering in exocytosis www.cell.com/cell/fulltex...
cell.com
Continuum architecture dynamics of vesicle tethering in exocytosis
Data from complementary imaging techniques were integrated into a model that resolves the dynamic exocyst ensemble and membrane architecture during exocytosis, an essential cellular pathway. Sec18 med...
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Wilfling Lab @wilflinglab.bsky.social · 13/01/2026
We are excited to share our new preprint which is now available to read on biorXiv: doi.org/10.64898/202... 🎉🎉🎉
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Wiesner Theresa @wiesner-t.bsky.social · 13/01/2026
🚨 Exciting news: Ciarán Butler-Hallisse's work on microtuble turnover is out! with help from @harrisonyork.bsky.social 💪 Look at those pretty neurons 👇😀
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Samara Reck-Peterson @samreckpeterson.bsky.social · 14/12/2025
The Reck-Peterson lab at Weill Cornell Medicine is seeking a technician or staff scientist to work on Aspergillus projects. Broad background in fungal biology and techniques required. Bioinformatics skills preferred. Find out more at: reckpetersonlab.org.
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Andy Moore @aaandmoore.bsky.social · 12/12/2025
This movie shows lysosomes (orange) and keratin (gray) in a cultured cell over 10 minutes.
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Patrycja Kozik @patrycja-kozik.bsky.social · 11/12/2025
Time for a new pre-print! How do dendritic cells control pore formation in their own endocytic compartments? Our work shows that the unique transmembrane anchor of perforin-2 does not protect DC membranes, but instead it enables antigen escape during cross-presentation doi.org/10.64898/202...
Pre-pore and cis pores formed by full length perforin-2 during antigen escape from early phagosomes
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Luis Bonet-Ponce @lysoluis.bsky.social · 11/12/2025
Grateful to @focalplane.bsky.social for inviting us to write about our last paper on lysosomal tubulation during the stress response (rupress.org/jcb/article/...)! focalplane.biologists.com/2025/12/11/d...
focalplane.biologists.com
Damage done, tubules on - Studying membrane damaged-induced lysosomal tubulation  - FocalPlane
Damage done, tubules on - Studying membrane damaged-induced lysosomal tubulation  - Default
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Jean lab @jeanlab-uds.bsky.social · 28/11/2025
It is a nice way to end the week: our improved RAB GTPase BioID map now online! www.nature.com/articles/s42... We hope it will be useful to the community, and we're happy to share any reagents!
nature.com
A proximity map of RAB GTPases delineates roles for RAB14 in EARP complex and UHRF1BP1 endosomal recruitments
Communications Biology - Proximity labeling proteomics of RAB GTPases identifies an array of neighboring RAB proteins. Functional validation studies reveal links between RAB25 and DENND6A, or...
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Eugene Katrukha 🇺🇦 @ekatrukha.bsky.social · 21/11/2025
Finally, the first public release of #BigVolumeBrowser, so after teasers, you can try it yourself. For details, please check the announcement post (1/2) forum.image.sc/t/bigvolumeb...
forum.image.sc
BigVolumeBrowser: a new 3D multi volume/mesh/point clould (SMLM) data viewer
Hello everyone, I’d like to share with you another 3D viewer for FIJI, BigVolumeBrowser (full documentation link). It‘s a first initial public release, so there is still space for improvements. Le...
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Kateryna Shkarina @kshkarina.bsky.social · 20/11/2025
New insights into the activation of the most elusive and (so far) the least understood human inflammasome: NLRP6 is a sensor of endolysosomal damage
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Peter Cullen @peterjcullen1.bsky.social · 20/11/2025
Excited to announce, the 93rd Biochemical Society Harden Conference will be on "Endosomal-lysosomal network dysfunction in neurodegeneration". Come and join us in early September on the beautiful south coast of England. Lots of speaker slots available from submitted abstracts!
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David Mick @mick-lab.bsky.social · 14/11/2025
Thrilled to share "in situ APEX activation" (iAPEX), a proximity labeling technology for subcellular #proteomics applied to primary #cilia. iAPEX uses an enzymatic cascade, in which a D-amino acid oxidase locally produces H2O2 to activate ascorbate peroxidase. www.nature.com/articles/s41...
nature.com
An enzymatic cascade enables sensitive and specific proximity labeling proteomics in challenging biological systems - Nature Communications
Proximity labeling allows proteomic mapping of subcellular structures. Here, Sroka et al. develop in situ APEX activation (iAPEX) to overcome limitations of labeling specificity and H2O2 toxicity, app...
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Prasanna Satpute-Krishnan @pskcellbio.bsky.social · 09/11/2025
Check out our @ascbiology.bsky.social #CellBio2025 Minisymposium on ER Homeostasis. With THIS speaker lineup, this event will be as dynamic, transformative and productive as the ER itself! So don’t 𝗦𝗧𝗥𝗘𝗦𝗦, 𝙩𝙧𝙖𝙣𝙨𝙡𝙤𝙘𝙖𝙩𝙚 yourselves over and join us to 𝗡𝗘𝗧𝗪𝗢𝗥𝗞 in world of the ER. (All PUNS intended.)
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Aaron Rupar @atrupar.com · 05/11/2025
Mamdani: "New York will remain a city of immigrants, a city built by immigrants, powered by immigrants, and as of tonight, led by an immigrant."
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Omaya Dudin 𓂆 ¦🍉¦🦠¦🔬¦ @dudinlab.bsky.social · 31/10/2025
🚨Our collaboration with @centriolelab.bsky.social & @gautamdey.bsky.social is out today in @cp-cell.bsky.social We show that #Expansion #Microscopy is a broad-spectrum modality for Euks, enabling 3D phenotypic maps rooted to phylogeny. #ProtistsOnSky #SciComm #SciSky www.cell.com/cell/fulltex...
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Elias Adriaenssens @elias-adriaenssens.bsky.social · 31/10/2025
Our latest review is now online! 👇 @martenslab.bsky.social Mechanism of autophagy initiation by transmembrane selective autophagy receptors | The EMBO Journal www.embopress.org/doi/full/10....
embopress.org
Mechanism of autophagy initiation by transmembrane selective autophagy receptors | The EMBO Journal
EMBO Press is an editorially independent publishing platform for the development of EMBO scientific publications.
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Holthuis Lab @holthuislab.bsky.social · 25/10/2025
Proud to share a preprint of our paper on how bridge-like lipid transport protein VPS13C senses lysosomal membrane tension in anticipation of membrane lesions to initiate net ER-to-lysosome lipid transfer for efficient lysosomal repair www.biorxiv.org/content/10.1...
biorxiv.org
VPS13C/PARK23 initiates lipid transfer and membrane remodeling for efficient lysosomal repair
Perturbations in lysosome integrity are tightly linked to neurological disorders and ageing, but the underlying pathogenic mechanisms are incompletely understood. Using an unbiased proteomic approach,...
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Nicolas Hubacz @nicolashubacz.bsky.social · 17/10/2025
What looks like art is actually biology — a rat liver cell seen under the microscope. Those glowing strands are actin and microtubules, the scaffolding that lets the liver filter blood, detoxify chemicals, and even regrow itself. Credit to Dr. Francisco Lázaro-Diéguez! #Science #Microscopy
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Rushika M. Perera @rushika-perera.bsky.social · 17/10/2025
Join us in sunny California for the 2026 GRC Autophagy meeting! Excited to co-chair with Oliver Florey and vice chairs Helene Knaevelsrud and @robzonculab.bsky.social Keynote speakers incl. Eileen White, @idikic.bsky.social and Sharon Tooze- Registration is open: link⬇️ www.grc.org/autophagy-in...
grc.org
2026 Autophagy in Stress, Development and Disease Conference GRC
The 2026 Gordon Research Conference on Autophagy in Stress, Development and Disease will be held in Ventura, California. Apply today to reserve your spot.
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Christophe 🔬 Leterrier @christlet.bsky.social · 15/10/2025
Interesting question. For me as a visually-driven person, consistency and formatting qualities have a direct effect on my understanding. I see high quality as an inclusion strategy - bad presentation will keep some people from getting it
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Manuel Thery @manuelthery.bsky.social · 14/10/2025
We hire! The CytoMorpho Lab is looking for an engineer with a background in cell and molecular biology to join our team in Paris. This is a 18-month contract position, but we're open to exploring long-term opportunities. More details here: cytomorpholab.com/index.php/jo...
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