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Jeroen Guikema

@jeroenguikema.bsky.social
2.4K followers 1.7K following 38 posts

Molecular biologist. 🧬Principal investigator at University of Amsterdam 🇳🇱 Research interests: immune repertoire diversification mechanisms, oncogenic signaling, B-cells, multiple myeloma #medsky #scisky #academicsky #biosky

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Reposted by Jeroen Guikema
bioRxiv Cancer Bio @biorxiv-cancer.bsky.social · 22/09/2026
MAPK signaling links BRD2 chromatin occupancy to PI3K/AKT inhibitor sensitivity www.biorxiv.org/content/10.64898/20…
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Reposted by Jeroen Guikema
Roland Pierik @roleo.eurosky.social · 08/09/2026
The number of cases of cervical cancer reported in Scotland among women given the HPV vaccine at 12-13 years of age is now zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. Zero. www.bbc.com/news/article...
bbc.com
No cervical cancer cases in fully HPV-vaccinated women in Scotland
A study published by Public Health Scotland finds that the HPV vaccine is "highly effective".
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Reposted by Jeroen Guikema
Vijay G. Sankaran @bloodgenes.bsky.social · 07/08/2026
🚨Two complementary preprints from our group reveal convergent mechanisms of inherited B-ALL predisposition. Check out this terrific work led by @larawahlster.bsky.social, @alneehus.bsky.social & #AndrewLee! www.biorxiv.org/content/10.6... www.biorxiv.org/content/10.6...
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Gerlich Lab @gerlichlab.bsky.social · 21/08/2026
Our paper is out in The EMBO Journal @embojournal.org! 🎉 We show how replicated chromosomes can maintain sister chromatid cohesion while still allowing dynamic loop folding within nested hierarchy of TADs. Check it out below 👇 1/2
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Christian Zierhut @zierlab.bsky.social · 21/08/2026
Supremely excited to share our new paper in @natcellbio.nature.com With an updated genetic cGAMP reporter, we reveal that cGAS activation by DNA damage is a rare event, and that cGAS enrichment on intracellular structures cannot be taken as evidence of activation. www.nature.com/articles/s41...
nature.com
A versatile cGAMP reporter reveals principles of cGAS activation by DNA damage and chromosome instability - Nature Cell Biology
Lebrec et al. present a FRET-based cGAS reporter and show that cGAS activation by genotoxic stress is rare and uncoupled from micronuclei. The study implicates R-loop structures and subtypes of chroma...
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International Society of Developmental Biology @isdb.bsky.social · 20/08/2026
New #preprint by @alejandrofabregastejeda.com and @theramseylab.bsky.social argue that in computational modelling of complex biological systems, more is not necessarily better! It is the ratio of free parameters to the experimental constraints that is important! 👇👇👇 doi.org/10.48550/arX... #compbio
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NRC @nrc.nl · 20/08/2026
Koers Moderna schiet omhoog na bericht over onderzoek kankervaccin
nrc.nl
Koers Moderna schiet omhoog na bericht over onderzoek kankervaccin
Wie dacht dat de chipsector of cryptovaluta grote koerssprongen konden maken, riemen vast voor de biotech: de koersen van farmaceuten Merck en Moderna (in Nederland gezamenlijk…
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Kaska Koltowska @lymphaticslab.bsky.social · 20/08/2026
Proud to share our new paper in EMBO Reports! 🧬 How does a cell "decide" to become lymphatic vs blood endothelium? Turns out it's not just which genes switch on — it's how the genome folds around them. 💥 link.springer.com/content/pdf/... #Lymphatics #Zebrafish #DevBio #VascularBiology #Genomics
The topologically associating domains (TADs) and chromatin accessibility of lymphatic endothelial cells diverge from those of blood endothelial cells. These differences underlie the activation of LEC-specific regulatory networks governing cell identity and involving genes linked to lymphatic disease.
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The EMBO Journal @embojournal.org · 18/08/2026
Multi-level transcriptional control of specific macrophage responses Marten Hoeksema and colleagues link.springer.com/article/10.1...
link.springer.com
Multi-level transcriptional control of specific macrophage responses - The EMBO Journal
Macrophages can adopt diverse functional states in response to environmental cues, a process that is fundamentally controlled at the level of transcriptional regulation. In this review, we outline a h...
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Jeroen Guikema @jeroenguikema.bsky.social · 22/04/2026
Exciting PhD vacancy in my lab at Amsterdam UMC! 4-year, fully funded KWF project studying cell-cell communication in the myeloma bone marrow niche and drug resistance. Feel free to share! More info: werkenbij.amsterdamumc.org/en/vacatures... #PhD #Myeloma #KWF @amsterdamumc.bsky.social
werkenbij.amsterdamumc.org
Vacatures - PhD hematology/oncology: bone marrow microenvironment in multiple myeloma - Amsterdam UMC
Explore how the bone marrow microenvironment drives therapy resistance in multiple myeloma. Develop innovative 3D models and single‑cell analyses in a dynamic research team at Amsterdam UMC.
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Jeroen Guikema @jeroenguikema.bsky.social · 17/04/2026
Attending the European Myeloma Network meeting in Prague with my group. Interesting meeting in a beautiful city! PhD student Maaike Janssens is doing a great job presenting her work on stromal cell-dependent drug resistance in myeloma. #myeloma #research #conference
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Reposted by Jeroen Guikema
Joachim Goedhart @joachimgoedhart.bsky.social · 13/04/2026
📣 New preprint alert! Co-authored by @spalaciosm.bsky.social and @andreacaldarola.bsky.social : Quantitative imaging of calcium dynamics with a green fluorescent biosensor and fluorescence lifetime imaging www.biorxiv.org/content/10.6...
Image of a calcium calibration curve, calcium concentration traces of individual cells and lifetime images of cells
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Jeroen Guikema @jeroenguikema.bsky.social · 06/04/2026
Sharing a new preprint from my lab. www.biorxiv.org/content/10.6... We show that AID not only induces mutations in DLBCL, but also reprograms transcriptional networks linked to proliferation and cell-of-origin.This suggests a broader role for AID in lymphoma beyond its classic mutator function.
biorxiv.org
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Jon Cooper @joncooper-us.bsky.social · 25/01/2026
Please share. 💔
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TRAstonDrs @castltrastondrs.medsky.network · 20/01/2026
#Medsky🧪 #immunosky A RCT provides direct human evidence that the placebo effect can shape humoral immunity, showing that reward-related brain activity correlates with vaccine-induced antibody production & opening new avenues for treating many medical conditions. Pdf www.nature.com/articles/s41...
nature.com
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Reposted by Jeroen Guikema
Penny Shockett @pshockett.bsky.social · 03/01/2026
pubmed.ncbi.nlm.nih.gov/41362770/
pubmed.ncbi.nlm.nih.gov
Recombination between fragile regions associated with chromosomal rearrangements in glioblastoma can be mediated by RAGs - PubMed
The RAGs, comprising RAG1 and RAG2, catalyze V(D)J recombination by recognizing recombination-signal sequences (RSS). Glioblastoma, the aggressive brain cancer, has many oncogenic chromosomal alterations; however, the mechanism of their generation is largely unknown. Here, we report that RAGs are ex …
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Waggoner Lab @labwaggoner.bsky.social · 28/12/2025
FOXO1 re-expression with a dual-recombinase allele rescues class switching in germinal center B cells rupress.org/jem/article/... @jem.org
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Jeroen Guikema @jeroenguikema.bsky.social · 27/12/2025
Happy to share a new online preprint on the immunomodulatory properties of levamisole, a steroid-sparing agent in children with relapsing idiopathic nephrotic syndrome. Joint work with Prof. Florquin & LEARNS clinical trial. tinyurl.com/nhd62mhw @amsterdamumc.bsky.social #research #kidney #B-cell
tinyurl.com
Levamisole-Mediated Suppression of B-Cell Proliferation and Antibody Production Reveals Mechanistic Insights into Idiopathic Nephrotic Syndrome Therapy
Levamisole (LMS) is a small imidazole derivative with immunomodulatory properties. Despite its longstanding clinical use in Idiopathic Nephrotic Syndrome (INS), the mechanisms underlying its immune-re...
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Reposted by Jeroen Guikema
Job Dekker @jobdekker.bsky.social · 22/12/2025
Exciting new paper out! @allanaschooley.bsky.social and Sergey Venev led this project that let to the discovery of two chromosome folding programs: one inherited via mitotic chromosomes and one mitotic inherited through the cytoplasm! www.nature.com/articles/s41...
nature.com
Interphase chromosome conformation is specified by distinct folding programmes inherited through mitotic chromosomes or the cytoplasm - Nature Cell Biology
Schooley et al. find that mitotically bookmarked loci drive a transient chromosome folding state during G1 entry that is subsequently modulated by factors inherited through the cytoplasm.
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Tatiana Moiseeva @tat1anamoiseeva.bsky.social · 18/12/2025
Ever wondered how TIMELESS/TIPIN can sit at the leading edge of the replication fork regulating its speed, but also bind polymerases and ssDNA/RPA in replication stress? We have an idea how it might work! Check out our new preprint, any feedback is highly appreciated! www.biorxiv.org/content/10.6...
a model for TIMELESS positions at the active fork: one complex sits at the leading edge of the fork, while the other one is on the lagging strand ssDNA/RPA, between the Okazaki fragments
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Jeroen Guikema @jeroenguikema.bsky.social · 17/12/2025
Thrilled and grateful to share that our research team at Amsterdam UMC has been awarded a new research grant from the Dutch Cancer Foundation (KWF) to study the bone marrow niche in multiple myeloma. Extremely thankful to KWF for their continued trust and support of our work! #myeloma #research 🔬🩸
amsterdamumc.org
Major KWF funding boost for innovative cancer research | Amsterdam UMC
KWF is investing over 8 million euros in Amsterdam UMC - Cancer Center Amsterdam to support 11 promising and innovative cancer research projects.
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Reposted by Jeroen Guikema
Rob Noble @robjohnnoble.bsky.social · 19/11/2025
Save the date! On behalf of the Society, I’m delighted to announce that the next International Society for Evolution, Ecology and Cancer conference will be taking place in Hersonissos, Crete, on May 21-24, 2026. Abstract submissions will open soon. More details: www.evocancer.com
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Digidenise @digidenise.bsky.social · 07/11/2025
Laat de kracht van muziek werken in positieve zin. Een AI gegenereerd anti-AZC nummer is megapopulair. Een tegenbeweging probeert nu het nummer Vrijheid, gelijkheid, zusterschap van Sophie Straat hoger te krijgen in de streaminglijsten. Helpen jullie mee? open.spotify.com/track/4EIM7Q...
open.spotify.com
Vrijheid, Gelijkheid, Zusterschap
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Adrian Liston @labliston.bsky.social · 04/11/2025
Foreign Scholars Skip US Conferences “I don’t agree with the politicization of scientific funding, the destruction of data collection and openness... and I feel like traveling to America at this point is a partial endorsement of what’s going on,” Liston said. www.insidehighered.com/news/faculty...
insidehighered.com
Cautious or Protesting, Foreign Scholars Skip U.S. Conferences
As President Donald Trump deploys National Guard troops to American cities and ICE arrests pick up, some international scholars are opting out of U.S. travel.
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Nature @nature.com · 29/10/2025
Funders must recognise that great discoveries often come from studies that seeks to advance knowledge for its own sake go.nature.com/47zrzYZ
go.nature.com
From MRI to Ozempic: breakthroughs that show why fundamental research must be protected
In these financially straitened times, funders must recognize that great discoveries often arise from work that was looking for something completely different.
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Carl T. Bergstrom @carlbergstrom.com · 25/10/2025
Scientists themselves determine what is valued within science. Yet we act as if beholden to external managers, bean-counters who confuse the production of papers with scientific progress. We don't have to find better ways to navigate the prison of metrics-driven scientific assessment.
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Bernhard Zdársky @bernhardzdarsky.bsky.social · 15/10/2025
‼️Our latest study, “Loss of STAT3 in acute myeloid leukemia favors tissue infiltration linked to CXCR4 signaling,” is now out in @bloodneoplasia.bsky.social #AML #STAT3 #CXCR4 #MLL-AF9 www.sciencedirect.com/science/arti...
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Alejandro Montenegro @aemonten.bsky.social · 07/10/2025
"Surprisingly, individual cells—from splenic lymphocytes to pluripotent stem cells—transcribe only ∼0.02%–3.1% of the genome, versus >80% in bulk, revealing limited genome engagement and profound cell-type and cell-to-cell heterogeneity" www.cell.com/cell/abstrac...
cell.com
Single-cell nascent transcription reveals sparse genome usage and plasticity
scFLUENT-seq is a single-cell method that sensitively captures nascent nuclear transcriptomes to reveal mRNA and ncRNA dynamics, heterogeneity across chromatin compartments, and transcriptional divers...
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Reposted by Jeroen Guikema
Brendel @brendelbored.bsky.social · 19/09/2025
Do you know how badly things have to be going in America for us to be owned this hard by the Dutch? The Dutch of all people
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Trends in Cell Biology @cp-trendscellbio.bsky.social · 03/09/2025
What makes genes burst
dlvr.it
What makes genes burst
Genes burst. Instead of being monotonously transcribed by a steady stream of RNA polymerases, active genes undergo transient and random pulses of transcription that are referred to as gene bursting. This property is ubiquitous and evolutionarily conserved from bacteria to humans, and reflects the inherent stochastic nature of most biological processes. The frequency and duration of gene busting events varies greatly between genes and is now recognized to be controlled by an intricate interplay between transcription factors, chromatin features, and the transcription machinery. Recent findings also point to proximal regulation of bursting by epigenetic chromatin states, a novel role of non-histone modifications, and of distal control of bursting patterns by enhancers. Uncovering the regulatory mechanisms of gene bursting sheds light on how cells maintain a diverse range of gene-specific expression by modulating the different kinetic parameters of bursting.
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Bret Freudenthal @freudlab.bsky.social · 05/09/2025
Thrilled to share our lab’s latest work in JBC! 🎉 We uncovered a critical role for APE1 Asn174 in stabilizing AP-sites using mutagenesis, enzymology, crystallography, and MD-simulations. Congrats to Kaitlin Dehart and all the co-authors! Check it out: www.jbc.org/article/S002...
jbc.org
APE1 active site residue Asn174 stabilizes the AP-site and is essential for catalysis
Apurinic/Apyrimidinic (AP)-sites are common and highly mutagenic DNA lesions that can arise spontaneously or as intermediates during Base Excision Repair (BER). The enzyme apurinic/apyrimidinic endonu...
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R Michael Howard @ixcel.bsky.social · 23/08/2025
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Marc Veldhoen @marcveld.bsky.social · 07/08/2025
Excised DNA circles from V(D)J recombination promote relapsed leukaemia Cutting your own DNA has a risk of leukaemia. www.nature.com/artic... 1/7
nature.com
Excised DNA circles from V(D)J recombination promote relapsed leukaemia
Nature - Excised signal circles are circular DNA by-products of V(D)J recombination that form a complex with the V(D)J recombinase, and when increased in abundance, result in increased mutagenesis,...
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Molecular Biology and Evolution @molbioevol.bsky.social · 30/07/2025
Pospelova et al. present a comparative analysis of full-length sequences of IG/TR loci across 46 mammalian species, demonstrating these as rapidly evolving genomic regions, with implications for immunogenomics. 🔗 doi.org/10.1093/molbev/msaf152 #evobio #molbio
Pospelova et al. present a comparative analysis of adaptive immune loci across diverse mammalian species, uncovering relationships between locus architecture, characteristics of immune genes, and population dynamics. The artwork illustrates how the structure of immunoglobulin heavy chain loci influences gene variability in three representative species from the study – the mountain lion, the ring-tailed lemur, and European hedgehog.
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Marc Veldhoen @marcveld.bsky.social · 31/07/2025
Respiratory viral infections awaken metastatic breast cancer cells in lungs Note: This concerns many infections (inflammation, trauma), including respiratory viruses and is NOT specific for SARS-CoV-2 as some claim. www.nature.com/artic... 1/9
nature.com
Respiratory viral infections awaken metastatic breast cancer cells in lungs
Nature - Mouse models show that respiratory infections from viruses such as influenza and SARS-CoV-2 can trigger metastasis of dormant breast cancer cells in the lungs, a finding supported by...
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Trevor Graham @trevorgraham.bsky.social · 20/06/2025
Using barcodes 📊 to track cancer 💊 resistance evolution: is it clonal selection or plasticity? @fwhiting.bsky.social‬ knows! His new "Evolutionary Informed Resistance Assays" (EIRAs) framework infers resistance evolution dynamics from barcode diversity data. www.nature.com/articles/s41... @icr.ac.uk
nature.com
Quantitative measurement of phenotype dynamics during cancer drug resistance evolution using genetic barcoding - Nature Communications
Understanding the dynamics of how drug resistance originates in cancer remains crucial, but it is not possible to observe them directly. Here, the authors construct a mathematical framework to infer d...
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Jeroen Guikema @jeroenguikema.bsky.social · 07/06/2025
Another tour de force by the Victora lab. A must read for germinal center aficionados. There goes the weekend!
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Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 24/05/2025
David Liu @harvard.edu beautifully articulates the criticality of basic science funding for developing revolutionary therapeutics like life-saving base editors 👏 youtu.be/8YhJM6zxYDw?...
youtu.be
Breakthrough Prize-Winning Biochemist on the Deadly Cost of Funding Cuts | Amanpour and Company
YouTube video by Amanpour and Company
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Jeroen Guikema @jeroenguikema.bsky.social · 04/05/2025
Interesting study on how to sensitize myeloma cells to the BCL2 inhibitor venetoclax by interfering with signal transduction pathways. #myeloma #science 🩸🔬https://www.nature.com/articles/s41408-025-01215-x
nature.com
Exploring BCL2 regulation and upstream signaling transduction in venetoclax resistance in multiple myeloma: potential avenues for therapeutic intervention - Blood Cancer Journal
Blood Cancer Journal - Exploring BCL2 regulation and upstream signaling transduction in venetoclax resistance in multiple myeloma: potential avenues for therapeutic intervention
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Ying Cao @neuralgrndstate.bsky.social · 03/05/2025
This is what we know about the so-called 'epithelial-mesenchymal transition' 'Lack of basic rationale in epithelial-mesenchymal transition and its related concepts' cellandbioscience.biomedcentral.com/articles/10....
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David Ho @davidho.bsky.social · 04/05/2025
I think a lot about what Carl Sagan said in one of his final interviews.
"WE'VE ARRANGED A society based on science and technology, in which nobody understands anything about science technology. And this combustible mixture of ignorance and power, sooner or later, is going to blow up in our faces. Who is running the science and technology in a democracy if the people don't know anything about it?"
"Science is more than a body of knowledge, it's a way of thinking. A way of skeptically interrogating the universe with a fine understanding of human fallibility. If we are not able to ask skeptical questions, to interrogate those who tell us that something is true, to be skeptical of those in authority, then we're up for grabs for the next charlatan, political or religious, who comes ambling along."
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Karolin Luger @nucleosomepolice.bsky.social · 02/05/2025
And, again, WHERE IS #BIGPHARMA in defending #basicscience? laying low? playing dead? Waiting it out? Do SOMETHING! SPEAK UP! Use your gigantic lobbying machine to defend us instead of peddling your wares and increasing your profits. Or do you think highly trained workforce grows on trees?
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Johan Duchêne @johanduchene.bsky.social · 30/04/2025
Antibodies don't work. NLRP3 is by far the most studied inflammasome — yet <30% of commercial antibodies were specific. Only 4 of 14 tested antibodies detected NLRP3 specifically. Antibodies must be validated before use. Full report by @ycharos.bsky.social : zenodo.org/records/1162...
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ᐯIᑕTOᖇ ᑎIᘔET, ᗰᗪ @nizet.bsky.social · 27/04/2025
B͓̊å͓c͓̊t͓̊e͓̊r͓̊i͓̊å͓l͓̊ s͓̊ů͓g͓̊å͓r͓̊ f͓̊ů͓e͓̊l͓̊s͓̊ c͓̊å͓n͓̊c͓̊e͓̊r͓̊ r͓̊i͓̊s͓̊k͓̊ Study in 𝘕𝘢𝘵𝘶𝘳𝘦 finds ADP-HEPTOSE, a bacterial sugar produced by Gram- gut flora, leaks into the bloodstream with age, activating NF-κB, giving pre-leukaemic blood cells a growth edge, and triggering dangerous clonal haematopoiesis Starczynowski Lab U Cincinnati
nature.com
Microbial metabolite drives ageing-related clonal haematopoiesis via ALPK1 - Nature
ADP-heptose binds to ALPK1, triggering transcriptional reprogramming and NF-κB activation, endowing pre-leukaemic cells with a competitive advantage due to excessive clonal proliferation.
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spjacksongroup.bsky.social @spjacksongroup.bsky.social · 14/04/2025
Thrilled to see this “veritable tour de force” led by John_C_Fielden from Jacob Corn lab out @nature.com, rdcu.be/ehd4E. This @erc.europa.eu funded project uses #CRISPRi to systematically scan 548 DDR genes for synthetic lethal interactions, ~150,000 pairwise combinations!
rdcu.be
Comprehensive interrogation of synthetic lethality in the DNA damage response
Nature - Combinatorial CRISPRi screening was used to map genetic interactions in DNA damage response pathways, revealing known and new connections, including the roles of WDR48 and USP1 in...
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Kaia Mattioli @kaiamattioli.bsky.social · 26/03/2025
our work on the molecular differences between transcription factor isoforms is out now in Molecular Cell! key point: 2/3rds of TF isos differ in properties like DNA binding & transcriptional activity many are "negative regulators" & misexpressed in cancer www.sciencedirect.com/science/arti...
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Marc Veldhoen @marcveld.bsky.social · 20/03/2025
Freedom of speech? Don't travel to the US, it is not save French scientist denied US entry after phone messages critical of Trump found France’s research minister said the scientist was traveling to Houston for a conference when his phone was searched www.theguardian.com/... 1/2
theguardian.com
French scientist denied US entry after phone messages critical of Trump found
France’s research minister said the scientist was traveling to Houston for a conference when his phone was searched
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Jeroen Guikema @jeroenguikema.bsky.social · 03/03/2025
Great people, awesome science. Highly recommend!
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Jeroen Guikema @jeroenguikema.bsky.social · 03/03/2025
How a small country can even be smaller: PVV MPs applauding the attack of Zelensky by Trump and Vance. This bunch is not to be trusted, their conviction lies with Russia. Let’s call them what they are: TRAITORS. Please pull the plug on this coalition. www.brusselstimes.com/1467549/pvv-...
brusselstimes.com
PVV leader Wilders stands behind Ukraine 'with conviction'
Dutch leader Geert Wilders supports Zelensky amidst US-Ukraine clash; calls anti-Trump sentiment unproductive.
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Waggoner Lab @labwaggoner.bsky.social · 20/02/2025
Deep profiling of B cells responding to various pathogens uncovers immune memory B cells and plasmablast lineages www.science.org/doi/10.1126/...
science.org
Deep profiling of B cells responding to various pathogens uncovers compartments in IgG memory B cell and antibody-secreting lineages
Deep profiling of B cells responding to various pathogens uncovers immune memory B cells and plasmablast lineages.
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