Sign in

Andreas Panagopoulos

@apanagopoulos.bsky.social
541 followers 1K following 19 posts

Senior Researcher @UZH. Interested in Genome stability, Cellular heterogeneity & Imaging.

PostsRepliesMedia
Reposted by Andreas Panagopoulos
altmeyerlab @altmeyerlab.bsky.social · 30/09/2026
New Postdoc & PhD openings coming up. Very grateful to the @snsf.ch for continuous research funding! PhD students will be recruited through @lifesciencezurich.bsky.social, postdoc candidates are encouraged to get in touch by email (contact details on www.altmeyerlab.org/). Thanks for sharing!
altmeyerlab.org
Altmeyer Lab
Research group headed by Matthias Altmeyer, University of Zurich, Switzerland.
066
Reposted by Andreas Panagopoulos
Nature Reviews Cancer @natrevcancer.nature.com · 29/09/2026
🚨 #REVIEW 🚨 Chen and Zou discuss how chronic replication stress shapes cancer biology and how emerging therapies are targeting the pathways that enable tumour cells to survive it. 👇 📖
dlvr.it
Replication stress in cancer: origins, consequences and therapeutic opportunities - Nature Reviews Cancer
Replication stress drives genomic instability, tumour evolution and therapeutic adaptation, yet also creates exploitable vulnerabilities. In this Review, Chen and Zou discuss how chronic replication stress shapes cancer biology and how emerging therapies are targeting the pathways that enable tumour cells to survive it.
1117
Reposted by Andreas Panagopoulos
Molecular Cell @cp-molcell.bsky.social · 28/09/2026
Online Now: ATM safeguards DNA replication by restraining pathological repriming at endogenous base lesions Online now:
dlvr.it
ATM safeguards DNA replication by restraining pathological repriming at endogenous base lesions
Sommerova et al. show that ataxia telangiectasia-mutated (ATM) protects replicating cells by restraining pathological bypass of endogenous oxidative base lesions through PRIMPOL-mediated repriming. When ATM is lost, post-replicative adducted ssDNA gaps accumulate, creating dependence on homologous recombination for repair and driving PARP hyperactivation and PARP inhibitor sensitivity.
063
Reposted by Andreas Panagopoulos
AndreaVentura @andreaventura.bsky.social · 25/09/2026
Very nice paper from @agnelsfeir.bsky.social and colleagues on the role of MMEJ in ecDNA maintenance and rearrangements. www.nature.com/articles/s41...
nature.com
MMEJ repair of breaks at TA repeats maintains ecDNA and cancer fitness - Nature
Stability of extrachromosomal DNA (ecDNA) relies on microhomology-mediated end joining at fragile TA-rich sites, with FANCM suppressing break formation, suggesting that Polθ disruption may destab...
0167
Reposted by Andreas Panagopoulos
Lopes_Lab @lopeslab.bsky.social · 16/09/2026
Thrilled to share a new important study from the lab, published today in @nature.com, showing how cohesin mediates efficient replication fork plasticity and stress response, using its loop extrusion activity to promote 3D contacts on replicating DNA: www.nature.com/articles/s41...
nature.com
Cohesin reshapes replication fork contacts to aid fork slowing and reversal - Nature
Cohesin-mediated loop extrusion limits sister-fork coupling and tethers nearby replication forks under replication stress, promoting fork reversal and slowing fork progression to safeguard genome...
46935
Reposted by Andreas Panagopoulos
Kazuhiro Maeshima @kazu-maeshima.bsky.social · 15/09/2026
How are mitotic chromosomes built? Our Review @cp-trendsgenetics.bsky.social revisits the classical chromosome scaffold model and connects it to condensins, topoIIα, and physical forces. We propose interphase chromatin domains as “building blocks”🧩of chromosomes: authors.elsevier.com/a/1nmwrcQbJI...
12820
Reposted by Andreas Panagopoulos
Kazuhiro Maeshima @kazu-maeshima.bsky.social · 08/09/2026
Is euchromatin really “open”? 🧬 Using super-resolution imaging🔬 our new study @natgenet.nature.com reveals: Euchromatin forms condensed domains in live cells. Cohesin constrains them and prevents domain mixing for proper transcriptional insulation🚧 🔗 www.nature.com/articles/s41... (1/2)
415067
Reposted by Andreas Panagopoulos
Anton Goloborodko @golobor.bsky.social · 03/09/2026
1/ out in @science.org! We found a new asymmetry in large-scale chromosome structure: sister chromatids are shifted by hundreds of kb in the 5′→3′ direction of their inherited strands! A close collaboration w/ @gerlichlab.bsky.social , led by @flaviacorsi.bsky.social www.science.org/doi/10.1126/...
215265
Reposted by Andreas Panagopoulos
Tom Sasani @tomsasani.bsky.social · 02/09/2026
How long does DNA damage last? @aaronquinlan.bsky.social and I found evidence that lesions are transmitted from parent (P0) to offspring (F1) in C. elegans. If they segregate unrepaired for multiple cell divisions, lesions generate multi-allelism in the F1 germline. www.biorxiv.org/content/10.6...
biorxiv.org
Inherited DNA damage generates multi-allelic mutations in C. elegans
Exogenous and endogenous mutagens generate a wide variety of DNA lesions, including bulky adducts, chemical modifications, and single- or double-stranded breaks. A phenomenon called “lesion segregation,” in which lesions evade repair and persist for multiple cell divisions, has recently been documented in tumors and healthy somatic tissues from mice and humans, respectively. Persistent lesions can generate multi-allelic variants (MAVs) by serving as templates for multiple rounds of error-prone replication. By reanalyzing data from a large C. elegans mutagenesis experiment, we observed robust evidence for MAVs at a small fraction (∼0.2%) of mutated sites in the offspring of strains treated with alkylating agents. Because these sequencing data were derived from the progeny of a single F1 animal — itself the offspring of a mutagenized P0 — all mutations should be biallelic. The presence of multi-allelic variation implies that some DNA lesions are transmitted to the F1 zygote, evade repair, and are repeatedly bypassed by error-prone polymerases during embryogenesis. We suspect that many more lesions are inherited than is suggested by MAV prevalence, and that a large fraction of biallelic mutations are also caused by inherited lesions. Our results demonstrate that DNA lesions serve as durable, transgenerational templates for mutagenesis in C. elegans . We speculate that lesion segregation in the early embryo may be a source of mosaicism and genetic diversity in humans, as well. ### Competing Interest Statement The authors have declared no competing interest. National Institutes of Health, https://ror.org/01cwqze88, R01HG012252
14424
Reposted by Andreas Panagopoulos
Cell - a Cell Press journal @cp-cell.bsky.social · 01/09/2026
Now online! Live-cell transcriptomics with engineered virus-like particles
dlvr.it
Live-cell transcriptomics with engineered virus-like particles
Najia, Le, Borrajo et al. establish “cellular self-reporting,” a technology to export molecular analytes from cells in virus-like particles. The authors demonstrate how mRNA export enables longitudinal transcriptome-wide profiling of living cells by sampling cell media. This platform transcends the destructive nature of conventional transcriptomic analysis methods and reveals gene expression dynamics in complex biological systems in situ.
042
Reposted by Andreas Panagopoulos
Akis (Argyris) Papantonis @akispapantonis.bsky.social · 25/08/2026
Newest from the lab - and the only of our manuscripts since the introduction of bioRxiv that we did not preprint (it will become obvious why). "Targeting addiction to HMGB2-driven transcriptional programs in pancreatic cancer" A thread...
43912
Reposted by Andreas Panagopoulos
marcelvanvugt.bsky.social @marcelvanvugt.bsky.social · 24/08/2026
Very pleased to share this new study: In a truly collaborative effort with the lab of Pim Huis in 't Veld @huis.bsky.social, we combined biochemistry with cell biological and genomic approaches to uncover how CIP2A works in mitotic DNA repair. www.biorxiv.org/content/10.6...
biorxiv.org
CIP2A tetramerization is required for mitotic DNA repair
DNA lesions that persist in mitosis threaten genome stability. These lesions recruit TOPBP1-CIP2A, a complex crucial to tether and process damaged DNA on mitotic chromosomes. Importantly, CIP2A is syn...
32411
Reposted by Andreas Panagopoulos
Daniel Durocher @durocher1.bsky.social · 25/08/2026
New work from the lab! We report that DDIAS is a downstream effector of CIP2A-TOPBP1 in mitosis that suppresses ssDNA to preserve genome integrity. From the great @yiboxue.bsky.social and many collaborators! Free link: authors.elsevier.com/a/1nfiF3vVUP... Pay link: www.cell.com/molecular-ce...
Model of DDIAS acting in mitosis to suppress ssDNA
56118
Reposted by Andreas Panagopoulos
The Groth lab @grothlab.bsky.social · 21/08/2026
‼️🚨Out now in Molecular Cell - Our latest study 𝐫𝐞𝐯𝐞𝐚𝐥𝐢𝐧𝐠 𝐧𝐞𝐰 𝐢𝐧𝐬𝐢𝐠𝐡𝐭𝐬 𝐢𝐧𝐭𝐨 𝐅𝐀𝐂𝐓 𝐟𝐮𝐧𝐜𝐭𝐢𝐨𝐧 𝐚𝐧𝐝 𝐭𝐡𝐞 𝐢𝐦𝐩𝐨𝐫𝐭𝐚𝐧𝐜𝐞 𝐨𝐟 𝐧𝐮𝐜𝐥𝐞𝐨𝐬𝐨𝐦𝐞 𝐨𝐫𝐠𝐚𝐧𝐢𝐬𝐚𝐭𝐢𝐨𝐧 𝐟𝐨𝐫 𝟑𝐝 𝐠𝐞𝐧𝐨𝐦𝐞 𝐦𝐚𝐢𝐧𝐭𝐞𝐧𝐚𝐧𝐜𝐞: tinyurl.com/2xctvx38. It was a pleasure to lead this collaborative effort alongside @nilskrietenstein.bsky.social More in🧵below 🪡
tinyurl.com
Maintenance of nucleosome organization through replication and transcription counteracts aberrant coalescence of active chromatin
Nucleosomes with their associated modifications organize and regulate the genome. It is unclear how this is integrated with the requirement of replica…
17227
Reposted by Andreas Panagopoulos
Andrew Blackford @andrewblackford.bsky.social · 24/08/2026
Our latest work describing DDIAS as a new component of the TOPBP1-CIP2A pathway in mitosis and its requirement for brain development is now published. Fantastic collaboration with @fenaochs.bsky.social, @profstewartlab.bsky.social, Lars Allan Larsen, @tcr-miller.bsky.social, Zafar Iqbal & others
54416
Reposted by Andreas Panagopoulos
Robert Arkowitz @robertarkowitz.bsky.social · 21/08/2026
RAD51 stabilizes neutrophil extracellular traps to compartmentalize inflammation | Science www.science.org/doi/10.1126/...
science.org
RAD51 stabilizes neutrophil extracellular traps to compartmentalize inflammation
Neutrophil extracellular traps (NETs) feature a branched chromatin architecture whose origin and function remain unknown. We found that NET branching is mediated by RAD51, a protein generating DNA jun...
1105
Reposted by Andreas Panagopoulos
Christian Zierhut @zierlab.bsky.social · 21/08/2026
Supremely excited to share our new paper in @natcellbio.nature.com With an updated genetic cGAMP reporter, we reveal that cGAS activation by DNA damage is a rare event, and that cGAS enrichment on intracellular structures cannot be taken as evidence of activation. www.nature.com/articles/s41...
nature.com
A versatile cGAMP reporter reveals principles of cGAS activation by DNA damage and chromosome instability - Nature Cell Biology
Lebrec et al. present a FRET-based cGAS reporter and show that cGAS activation by genotoxic stress is rare and uncoupled from micronuclei. The study implicates R-loop structures and subtypes of chroma...
97130
Reposted by Andreas Panagopoulos
Gerlich Lab @gerlichlab.bsky.social · 21/08/2026
Our paper is out in The EMBO Journal @embojournal.org! 🎉 We show how replicated chromosomes can maintain sister chromatid cohesion while still allowing dynamic loop folding within nested hierarchy of TADs. Check it out below 👇 1/2
13210
Reposted by Andreas Panagopoulos
Hasan Yardimci @hyardimci.bsky.social · 20/08/2026
Delighted to share our latest publication, a collaborative work with @hanasedlackova.bsky.social and @puckknipscheer.bsky.social. Grateful to everyone who contributed to this project. www.cell.com/cell-reports...
cell.com
FANCJ and RTEL1 facilitate pre-replication complex disassembly following replisome collision
Cameron et al. show that dormant pre-replication complexes are removed upon collision with replication forks in Xenopus egg extracts. They identify FANCJ and RTEL1 as key factors in this process and s...
02814
Reposted by Andreas Panagopoulos
Hana Polasek-Sedlackova @hanasedlackova.bsky.social · 06/08/2026
📢 We are looking for a PhD student to join our lab! Explore how DNA replication is regulated during development and disease using quantitative cell biology, advanced microscopy, CRISPR engineering, and AI tools. 👉 Full details: www.ibp.cz/en/for-publi... Thank you for sharing! 🔬
065
Reposted by Andreas Panagopoulos
Lopes_Lab @lopeslab.bsky.social · 15/08/2026
What if the much-debated mechanisms of PARP inhibitors vary greatly across tissues and tumor subtypes? Our new preprint reveals surprising links between replication fork dynamics and PARPi sensitivity across acute myeloid leukemia (AML) subtypes. www.biorxiv.org/cgi/content/...
1115
Reposted by Andreas Panagopoulos
Max Reuter @reuterlm.bsky.social · 13/08/2026
Happy to share a new review article from our group: “Timing the origin: chromatin, transcription, and the spatiotemporal control of eukaryotic DNA replication”. I’m proud to see how the work of several students in my group has come together in this article. @imbmainz.bsky.social @sfb1361.bsky.social
degruyterbrill.com
083
Reposted by Andreas Panagopoulos
Matt Jones @mattjones.bsky.social · 10/08/2026
New paper from my group at @mitkochinstitute.bsky.social, MIT IMES, and MIT Biology! I am thrilled to share that our paper describing scAmp, a new method for analyzing extrachromosomal DNA amplifications at single-cell resolution, has been published in @natcomms.nature.com. Thread below 👇
2147
Reposted by Andreas Panagopoulos
Molecular Cell @cp-molcell.bsky.social · 06/08/2026
Online Now: Coordination of ALT telomere maintenance across the cell cycle Online now:
dlvr.it
Coordination of ALT telomere maintenance across the cell cycle
Alternative lengthening of telomeres (ALT) counteracts telomere shortening independently of the activity of the enzyme telomerase. ALT uses telomere sequences for recombination-based telomere extension, and recent work has started to reveal how this pathway works across the cell cycle and even across cell divisions.
073
Reposted by Andreas Panagopoulos
Karuna Ganesh @karunamdphd.bsky.social · 05/08/2026
1/ Delighted to share our paper out today in Nature: ZFP36L2 orchestrates stress-adaptive plasticity in regeneration and cancer. We found the switch that lets differentiated cells rewind into stem cells — in gut repair, and in metastasis. 🧵 doi.org/10.1038/s415...
doi.org
ZFP36L2 orchestrates stress-adaptive plasticity in regeneration and cancer - Nature
The RNA-binding protein ZFP36L2 mediates stress-adaptive plasticity in intestinal regeneration and colorectal cancer metastasis.
33210
Reposted by Andreas Panagopoulos
Max Reuter @reuterlm.bsky.social · 23/07/2026
New paper out in Nature Communications! 🥳🧬🔬 We map the earliest DNA strand separation during MCM2-7 helicase activation at near base-pair resolution, revealing where origin melting begins and how DNA is routed through the Mcm2/5 gate. doi.org/10.1038/s414... #DNAReplication
doi.org
Mechanisms of MCM2–7 helicase activation and initial DNA melting at near base-pair resolution - Nature Communications
DNA replication begins when inactive helicases are switched on to unwind DNA. Here, the authors map this activation in yeast, revealing where DNA first melts and how helicase splitting, factor release...
082
Reposted by Andreas Panagopoulos
Barbara Marte @barbmarte.bsky.social · 22/07/2026
new out in Nature www.nature.com/articles/s41...
nature.com
Genetic background sets the trajectory of experimental cancer evolution - Nature
Experimentally replaying tumour evolution in divergent mouse strains reveals the importance of interactions between genetic ancestry and acquired cancer-driving mutations in shaping the earliest stage...
02514
Reposted by Andreas Panagopoulos
Akis (Argyris) Papantonis @akispapantonis.bsky.social · 21/07/2026
Our latest is now out in @nataging.nature.com giving reason to celebrate! Led by talented Spiros Palikyras, it improves our preprint (posted 2 years ago!) dissecting the mechanism and functional consequences of CTCF clustering upon senescence commitment of human cells. www.nature.com/articles/s43...
nature.com
Senescent cells cluster CTCF on nuclear speckles to instruct an alternative splicing program - Nature Aging
Palikyras and colleagues investigate chromatin reorganization upon senescence induction, reporting that components of nuclear speckles coordinate chromatin rewiring and a senescence-associated splicin...
35923
Reposted by Andreas Panagopoulos
Agnel Sfeir @agnelsfeir.bsky.social · 17/07/2026
mtDNA deletions cause incurable diseases. Our CRISPR screen found a fix: deleting MTERF1 restores mitochondrial function, not by clearing bad genomes, but by making the healthy ones work harder. Simple Biology! New preprint 👇 @tatakavlashvili.bsky.social www.biorxiv.org/content/10.6...
biorxiv.org
MTERF1 loss buffers against pathogenic mtDNA deletions through transcriptional regulation
Large-scale mitochondrial DNA (mtDNA) deletions cripple oxidative phosphorylation once they exceed a critical heteroplasmy threshold, causing incurable mitochondrial pathologies. Using a genome-wide C...
03218
Reposted by Andreas Panagopoulos
Ross Chapman @rosschapmanlab.bsky.social · 17/07/2026
Missed it? Our March preprint shows how endogenous oxidative base damage drives the PARPi response in ATM-deficient cells. In working this out we uncovered a role for ATM in safeguarding replication through damaged DNA and discuss what this could mean for Ataxia-Telangiectasia.
2147
Reposted by Andreas Panagopoulos
Gabriel Neurohr @gabrielneurohr.bsky.social · 15/07/2026
We just preprinted Marianna’s PhD work in which we asked: How does non-coding DNA affect cell physiology? And why do some organisms have so little of it while other genomes are 99% non-coding?
1146
Reposted by Andreas Panagopoulos
Loïc A. Royer 💻🔬🧪 @loicaroyer.bsky.social · 14/07/2026
📣 Tracking cells through time – including divisions – is a core problem in live-imaging microscopy. We built HOCT, an edge-centric Transformer that hits state-of-the-art on the Cell Tracking Challenge without a pretrained image encoder. Work led by @jookuma.bsky.social arxiv.org/abs/2607.11754 🧪🔬💻
67021
Reposted by Andreas Panagopoulos
Loïc A. Royer 💻🔬🧪 @loicaroyer.bsky.social · 07/07/2026
1/ 🧬🧪 New preprint! Do you actually need a biology-specific foundation model to predict how cells respond to perturbations? Surprising answer: a general-purpose tabular model - never trained on a single cell - matches or beats the specialists. 🧵 📄 doi.org/10.64898/2026.06.28.735106 @biohub
Tabular Foundation Models Are Competitive Cellular Perturbation Predictors Across Biological Scales
3268
Reposted by Andreas Panagopoulos
Shayan Shamipour @shamipourshayan.bsky.social · 03/07/2026
🚀Excited to share our latest efforts in bringing highly multiplexed whole-mount imaging to intact multicellular systems! Shield-4i: an integrated platform to study multi-scale information flow in 3D embryos and embryo-like systems. Kudos to @rhornb.bsky.social for this major milestone in the lab!🚀
13613
Reposted by Andreas Panagopoulos
Nitika Taneja @TanejaLab @nitikataneja.bsky.social · 01/07/2026
Very excited to share our new Nature study! We discovered that replication stress stabilizes CTCF-dependent chromatin loops enclosing stressed nascent DNA, where G9a-mediated heterochromatin protects it from nucleolytic degradation. rdcu.be/frzLg Huge thanks to all our collaborators and co-authors!
nature.com
Replication-stress-induced chromatin loops protect fork stability - Nature
Replication stress induces the formation of transient chromatin loops that enclose de novo heterochromatin-enriched stalled replication forks.
56225
Reposted by Andreas Panagopoulos
Sandra Segura-Bayona @ssegurabayona.bsky.social · 01/07/2026
🧬 Our new paper is out in @natsmb.nature.com! ATRX is one of the most mutated genes in cancer, and linked to the rare ATR-X syndrome. We ran genome-scale CRISPR screens to map how it protects the genome, and found it is doing two separate jobs... 🧵 (1/4) nature.com/articles/s41594-026-01827-2
nature.com
Distinct ATRX functions cooperate with 9-1-1 and CST complexes to safeguard replication and telomere integrity - Nature Structural & Molecular Biology
Segura-Bayona et al. uncover genetically separable ATRX functions that independently safeguard telomeres and genome replication, revealing how CST and 9-1-1 pathways suppress accumulation of toxic sin...
2279
Reposted by Andreas Panagopoulos
Cornelia Schwayer @cschwayer.bsky.social · 01/07/2026
Excited to share that our work on ‘How the gut gets patterned during regeneration’ is out now cell.com/cell/fulltext/S0092-8674(26)00696-3 Thanks a lot to @priscaliberali.bsky.social @silviabarbiero.bsky.social @davidbrueckner.bsky.social @ehannezo.bsky.social and all co-authors! 🧵
cell.com
Multiscale integration of tissue and chromatin context converts cell heterogeneity into stable intestinal patterning
During regeneration, tissues must translate transient cellular variability into stable spatial organization. Tissue architecture generates a density-dependent window of heterogeneity in the mechanosen...
87723
Reposted by Andreas Panagopoulos
Cardoso lab @cardosolab.bsky.social · 11/06/2026
New review in NAR! We connect the two halves of the DNA replication field — single-cell microscopy and genome-wide sequencing to show how each method’s strengths build one picture: from DNA fibers → replication foci → origin & timing maps. 🔗 doi.org/10.1093/nar/gkag550 @narjournal.bsky.social
doi.org
Spatial organization and dynamics of genome replication: from forks to foci
Abstract. Genome replication is without doubt the most complex and critical activity of all living cells. Any error may not only affect the cell itself but
0122
Reposted by Andreas Panagopoulos
Alberto Ciccia @albertociccia.bsky.social · 08/06/2026
Excited to finally share our preprint on mapping the genetic interaction network of the DNA damage response with combinatorial knockout screens led by Sam Hayward, Alina Vaitsiankova, and Tomas Lama-Diaz! www.biorxiv.org/cgi/content/...
biorxiv.org
Mapping the genetic landscape of the DNA damage response with Cas12a-based combinatorial knockout screens
The DNA damage response (DDR) is a complex network of cellular pathways that ensures the faithful maintenance of our genomes upon a wide array of genomic insults. To elucidate the functional architect...
23822
Reposted by Andreas Panagopoulos
Manu Leonetti @manu-leo.bsky.social · 03/06/2026
📣 new preprint multimodal atlas. Imaging + scRNA, 57M cells. 🧬🔬 Cells are complex dynamical systems — but most ways we measure them destroy them. We asked: how does live imaging compare to scRNA-seq, the field’s gold std? The answer surprised us 🧵 www.biorxiv.org/content/10.6...
13711
Reposted by Andreas Panagopoulos
CMAzzalin Lab @cmazzalinlab.bsky.social · 29/05/2026
📣New Postdoc and Technician opportunities in out lab!📣 We are currently looking for a postdoc interested in telomeres, aging and innate immnuity, and with experience in high-end microscopy. Application details at gimm.pt/jobs/express...
112
Reposted by Andreas Panagopoulos
Alessandro Costa @costalaboratory.bsky.social · 28/05/2026
New preprint from our lab! We've been working out how the CMG replicative helicase gets built. 🧵 1/3
2148
Reposted by Andreas Panagopoulos
Katherine Aird @airdlab.bsky.social · 27/05/2026
It's time to rewrite reviews-aKG doesn't just regulate demethylation. Work from my lab and @mzspectrum.bsky.social demonstrates a new role for aKG in promoting histone acetylation and DNA repair through regulating carnitine synthesis. Congrats Apoorva Uboveja! www.nature.com/articles/s41...
nature.com
αKG-mediated carnitine synthesis drives DNA repair via histone acetylation - Nature
The metabolite αKG promotes carnitine synthesis and increases site-specific histone acetylation, thereby promoting homologous recombination-mediated DNA repair, which has potential implications f...
34717
Reposted by Andreas Panagopoulos
Martin Taylor @mstaylor.bsky.social · 26/05/2026
Interested in DNA damage and the mechanisms of mutagenesis? We are hiring post-doctoral scientists as part of the amazing CAUSE Cancer Grand Challenge team. Biochemistry, genomics and computational biology... tinyurl.com/yc5xs3wa tinyurl.com/4unu5uu9 CAUSE www.cancergrandchallenges.org/cause
Cancer Grand Challenges - Team CAUSE logo
088
Reposted by Andreas Panagopoulos
Petr Cejka @cejkalab.bsky.social · 20/05/2026
Happy to share our collaborative project with Stephane Marcand, on the protective role of Rap1 at telomeres. It turned out that our favorite protein, MRX, has the ability to measure telomere length, and activate response pathways when telomeres become too short. www.nature.com/articles/s41...
2175
Reposted by Andreas Panagopoulos
Peter Ly @peterlylab.bsky.social · 19/05/2026
Excited to share our latest paper! We found that large pieces of the human genome can transfer between cells upon direct contact, endowing recipient cells with heritable phenotypic changes. @cp-cell.bsky.social (1/7) www.cell.com/cell/fulltex...
1116667
Reposted by Andreas Panagopoulos
Fabian Theis @fabiantheis.bsky.social · 12/05/2026
Excited to share our RegVelo paper in Cell www.cell.com/cell/fulltex... We unify RNA velocity + GRNs into one model → better OOD prediction of perturbations (e.g. gene KOs), with examples incl. neural crest KO predictions 🔬 Big thanks to W Wang, Z Hu & T Sauka-Spengler 🙏
14212
Reposted by Andreas Panagopoulos
Chris Lord and Andrew Tutt’s Lab Institute of Cancer Research @icrlordlab.bsky.social · 06/05/2026
If you are interested in PARP inhibitors and history, this might be of interest to you. www.nature.com/articles/s41.... An attempt to cover the work of thousands and their immense contributions to the development of a targeted approach to treating cancers.
nature.com
Two decades of PARP inhibitor synthetic lethality in cancer - Nature
The past two decades of PARP inhibitor synthetic lethality in cancer is explored.
01510
Reposted by Andreas Panagopoulos
Gerlich Lab @gerlichlab.bsky.social · 06/05/2026
New preprint out!🧬 How do cells keep replicated sister chromatids linked for DNA repair while folding 3D loops for gene expression? Extrusion folds DNA but separates sisters, while cohesion connects them, risking mutual interference. How do they coexist?🧵👇 🔗 doi.org/10.64898/2026.05.02.722390 1/6
doi.org
25422
Reposted by Andreas Panagopoulos
Alberto Ciccia @albertociccia.bsky.social · 02/05/2026
Happy to share our new review in @annualreviews.bsky.social on abasic sites and their impact on DNA replication written by @angelotaglialatela.bsky.social. www.annualreviews.org/content/jour...
annualreviews.org
Endogenous Sources of Abasic Sites and Implications for DNA Replication: Mechanisms of Fork Stalling and Recovery
Apurinic/apyrimidinic (AP) sites, also known as abasic sites, are among the most frequent DNA lesions, arising spontaneously or as intermediates in base excision repair. Their structural impediment to...
13017