Sign in

Kaitlyn Kiernan

@kaitlynakiernan.bsky.social
306 followers 489 following 7 posts

Postdoc in the Sazanov lab at ISTAustria. Using structural biology to find meaning in a world ruled by microbes. 🔬🦠

PostsRepliesMedia
Reposted by Kaitlyn Kiernan
Vytaute Boreikaite @vytaute.bsky.social · 08/10/2026
I’m very excited to share my postdoc work in the @plaschkalab.bsky.social, where we investigated the very final act of splicing – spliceosome termination, revealing the stepwise dismantling of the spent spliceosome www.nature.com/articles/s41... (1/11)
nature.com
Mechanism of spliceosome termination - Nature
A coordinated sequence of RNA helicases and associated factors dismantles normal and defective spliceosome complexes to enable intron degradation and ensure accurate gene expression.
27325
Reposted by Kaitlyn Kiernan
Michelle Fry @myfry.bsky.social · 02/10/2026
1/ 🧵 Two classic mitochondrial pathways the TCA cycle and OXPHOS are taught as linked but distinct pathways. I’m happy to share our new work out in @cp-cell.bsky.social showing that in Acanthamoeba they're physically linked—with a TCA enzyme incorporated in ATP synthase. www.cell.com/cell/fulltex...
cell.com
Acanthamoeba ATP synthase structure reveals the TCA cycle is tethered to OXPHOS
Acanthamoeba castellanii, a pathogenic amoeba, belongs to an evolutionary branch distinctly removed from humans and fungi. Cryo-EM of the organism’s ATP synthase enzyme using raw mitochondrial lysates...
15326
Reposted by Kaitlyn Kiernan
Manon Demulder @manondemulder.bsky.social · 02/10/2026
If you’ve always been curious about how algae fix carbon, @phaips.vd.st, @cellarchlab.com and I have put together the quickest route into pyrenoids. And if you don’t feel like reading at all, we have an accompanying poster doi.org/10.1242/jcs....
06224
Reposted by Kaitlyn Kiernan
Andrew Santiago-Frangos @asantiagofrangos.bsky.social · 01/10/2026
Our lab's first preprint! The antiphage protein Tiamat is an ATPase and DNase with homologs across the tree of life. What started as undergrad Shirley Yuan's summer project grew into a paper and a collaboration with @jpkbravo.bsky.social's group. Link: www.biorxiv.org/content/10.6...
14924
Reposted by Kaitlyn Kiernan
Basil Greber @bjgreber.bsky.social · 01/10/2026
Those who had a careful look at the methods section of our work on the #cryoEM structure of the CDK11-cyclin L-SAP30BP complex will have noticed that we added a short peptide to our sample before freezing. If you wonder why...
14120
Reposted by Kaitlyn Kiernan
Rasmus Jensen @rasmusjensen.bsky.social · 25/09/2026
🎉 Out today in Cell: the paper I've been looking forward to sharing for a long time 🎉 We used cryo-ET to find a molecular machine nobody knew existed on the surface of a minimal bacterium, and worked out what it does. 🧵(1/7) #TeamTomo #cryoET
1023696
Reposted by Kaitlyn Kiernan
Craig Kaplan @triggerloop.bsky.social · 25/09/2026
Cryo-EM peeps are living the dream www.science.org/doi/10.1126/...
science.org
In-cell structures visualize human pre-ribosome assembly in the nucleolus
In eukaryotes, ribosome biogenesis initiates within the nucleolus, a hallmark multilayered compartment of the nucleus. Structures of pre-ribosomes have been characterized ex situ, but their assembly p...
16732
Reposted by Kaitlyn Kiernan
Martin Pacesa @martinpacesa.bsky.social · 21/09/2026
ʙɪɴᴅᴄʀᴀꜰᴛ2 is out, and we're not waiting for the paper. The full code drops today, free for academic and industry use. We're releasing it early so you can start designing right now, and bring its full power to the current Adaptyv competition. github.com/PacesaLab/Bi...
4293142
Reposted by Kaitlyn Kiernan
Alan Brown @alanbrownhms.bsky.social · 10/09/2026
Millions of beating cilia keep airways clean. At the base of each is the transition zone (TZ), a gate that controls which proteins enter and leave. In our paper out today in Science, we used cryo-FIB-ET to image the TZ inside human airway cells www.science.org/doi/10.1126/...
science.org
In situ structure of the human ciliary transition zone links linker defects to primary ciliary dyskinesia
The ciliary transition zone (TZ) regulates ciliary proteome composition, yet its molecular architecture, protein content, and contribution to motile ciliopathies remain poorly defined. We applied in situ cryo-electron tomography and subtomogram averaging ...
211945
Reposted by Kaitlyn Kiernan
Hauke Hillen @haukehillen.bsky.social · 11/09/2026
Happy to share our new preprint on the structure of the human mitochondrial RNA degradosome, a central player in organellar RNA metabolism! Work led by graduate student @paulafprado.bsky.social in our group. www.biorxiv.org/content/10.6... 🧵 1/9
19134
Reposted by Kaitlyn Kiernan
Leonie Anton @leonieanton.bsky.social · 03/09/2026
I am excited to share that I will start my group @embl.org in Grenoble in February 2027, where we will investigate host-pathogen interactions using in situ cryo electron microscopy🦠❄️🔬! I am recruiting PhD students through the current open call of the EMBL PhD Program: www.embl.org/about/info/e...
embl.org
Anton Group – Cellular structural biology of host-pathogen interactions
46018
Reposted by Kaitlyn Kiernan
Murphy Lab @bjmurphylab.bsky.social · 03/09/2026
Check out our newest preprint! tinyurl.com/mttvaed3 Max was able to resolve cryo-EM structures of the DsrMKJOP complex, which catalyzes a critical step in sulfur metabolism and sulfide production is sulfate-reducing microbes. The main findings are summarized in the video below 📽️
1238
Reposted by Kaitlyn Kiernan
Jack Bravo @jpkbravo.bsky.social · 03/09/2026
…and in other great news, our lab has also been awarded an ERC Starting Grant! 🥳 Very excited for what’s ahead and incredibly grateful to my team, collaborators, and everyone who has supported us along the way.
7643
Reposted by Kaitlyn Kiernan
Jack Bravo @jpkbravo.bsky.social · 03/09/2026
Honored to be named a 2026 Vallee Scholar! 🎉 Excited about the research ahead and especially to be part of the Vallee Scholar community.
5423
Reposted by Kaitlyn Kiernan
Rhys Grinter @rhyswg.bsky.social · 18/08/2026
Out now in @natmicrobiol.nature.com: Bacillus subtilis builds protein filaments that act as a pseudomembrane, pulling quinone out of the bilayer and carrying it into the cytosol for reduction by NADH dehydrogenase, well away from the membrane itself. doi.org/10.1038/s415... 1/5
27624
Reposted by Kaitlyn Kiernan
bioRxivpreprint @biorxivpreprint.bsky.social · 28/07/2026
Recovery of a minor cryo-EM particle population reveals conformational equilibria linking cofactor loading, turnover, and reactivation in methionine synthase www.biorxiv.org/content/10.64898/20…
021
Reposted by Kaitlyn Kiernan
Jason Nomburg @jnoms.bsky.social · 22/07/2026
Happy to share the first preprint out of the Nomburg lab! Many aspects of cellular immunity are shared across the tree of life. Here, we show that some of these conserved aspects of cellular immunity are mirrored by conserved effectors of immune antagonism. Thread below! 1/15
38249
Reposted by Kaitlyn Kiernan
Luke Lavis @rhodamine110.bsky.social · 17/07/2026
Excited to see this collaboration now in print. Dye chemistry meets AI-designed proteins. Three small, orthogonal tags; lifetime modulation; split versions. Request the free dyes at dyes.janelia.org www.science.org/doi/10.1126/...
science.org
De novo design of orthogonal far-red, orange, and green fluorophore-binding proteins for multiplexed imaging
Fluorescent proteins and small-molecule dyes offer complementary advantages for biological imaging: proteins are amenable to genetic tagging, whereas dyes provide superior brightness and photostabilit...
010839
Reposted by Kaitlyn Kiernan
Chi-Min Ho @cmholab.bsky.social · 30/06/2026
Incredibly proud of Messi Haile @mehsehret.bsky.social, a founding member of the Ho Lab, for her beautiful work uncovering the inner workings of a central piece of the malaria parasite invasion machinery: the malarial moving junction, out today in @cellpress.bsky.social! tinyurl.com/4p3md2eb 🦠❄️🔬
410935
Reposted by Kaitlyn Kiernan
Svetlana Dodonova @dodonova-sveta.bsky.social · 19/06/2026
Excited to share our new preprint! 🧬❄️ by brilliant @mdreimann.bsky.social and great collaborators! Using cryo-ET&EM, we reveal archaeal chromatin in a near-native state: variable-beads-on-a-string fibers shaped by growth phase and histone composition #ArchaeaSky www.biorxiv.org/content/10.6...
815363
Reposted by Kaitlyn Kiernan
paulschanda.bsky.social @paulschanda.bsky.social · 14/06/2026
📢 New publication. We answered an old question in structural biology: (how) does the crystal lattice impact proteins? In particular, how does the crystal restrict the protein's dynamics? We used local probes of dynamics: the rotation of aromatic rings. 🧵 www.nature.com/articles/s41...
nature.com
Aromatic ring flips reveal reshaping of protein dynamics in crystals and complexes - Nature Chemistry
The extent to which crystal packing constrains protein dynamics is hard to decipher. Now a combination of NMR, crystallography and molecular dynamics simulations show that intermolecular contacts can ...
14214
Reposted by Kaitlyn Kiernan
Cell Host & Microbe @cp-cellhostmicrobe.bsky.social · 12/06/2026
NAD to the bone: How bacteria put phages under aRES-t … and how phages fight back Preview of work IDing aRES, bacterial proteins that deplete cellular NAD+, generating products that cannot be utilized by phage NAD+ regeneration pathways www.cell.com/cell-host-mi...
cell.com
NAD to the bone: How bacteria put phages under aRES-t … and how phages fight back
In this issue of Cell Host & Microbe, Osterman et al. discover aRES, a new family of bacterial immune proteins that deplete cellular NAD+, generating cleavage products that cannot be utilized by canon...
02211
Reposted by Kaitlyn Kiernan
Andrew Plested @andrewplested.bsky.social · 12/06/2026
Striking improvement with the laser phase plate to boost contrast, and in exactly the range that's needed for modelling the details of protein structures. Still lots of headroom in Cryo-EM. www.science.org/doi/10.1126/... #biophysics
Improved structural resolution for the protein haemoglobin when the laser phase plate in a cryo-electron microscope is turned on.
0167
Reposted by Kaitlyn Kiernan
Oli Clarke @olibclarke.bsky.social · 11/06/2026
The results here re 3D classification are quite impressive. Would be interesting to see how much the LPP improves classification of near-native samples with extreme compositional heterogeneity (e.g. derived from cellular fractions)
science.org
Laser phase plate improves structure determination of small proteins by cryo-EM
Phase plates can in principle overcome the poor image contrast in electron cryo–microscopy (cryo-EM) and the resulting limits on the structural reconstruction of small proteins. However, previous desi...
14917
Reposted by Kaitlyn Kiernan
ktr-nakanishi.bsky.social @ktr-nakanishi.bsky.social · 10/06/2026
Narry Kim & Soung-Hun Roh's paper and our recent paper nicely complement each other. Their study reveals an early chaperone-assisted step in AGO2 loading. Our work captures the subsequent assembly intermediates and uncovers target-assisted passenger ejection (TAPE). www.cell.com/molecular-ce...
cell.com
Structural basis for RISC assembly of human Argonaute2
Zhang et al. report cryo-EM structures of AGO2-siRNA complexes capturing RISC assembly intermediates. They reveal MID-PIWI-mediated duplex loading, α14-guided end sensing, and stepwise passenger peeli...
173
Reposted by Kaitlyn Kiernan
bioRxiv Biophysics @biorxiv-biophys.bsky.social · 06/06/2026
A Crossed Laser Phase Plate for CryoEM www.biorxiv.org/content/10.64898/20…
088
Reposted by Kaitlyn Kiernan
Pilhofer Lab 🦠❄️🔬 @pilhoferlab.bsky.social · 01/06/2026
🛠️💉It's time for engineering contractile injection systems! @chipericson.bsky.social & @davidschaumann.bsky.social introduce programmable CIS - PROCIS, combining tail length control, non-native cargo loading, and cell retargeting all in one system! www.biorxiv.org/content/10.6... 🧵 1/5
26429
Reposted by Kaitlyn Kiernan
Rémi Fronzes @fronzeslab.bsky.social · 26/05/2026
New preprint. In S. sanguinis, a C5a peptidase-like protease (ScpH) polymerizes along eDNA, turning it into a catalytic biofilm scaffold. Great work from @robinanger.bsky.social in our lab, with Pelicic lab @lcbofficiel.bsky.social www.biorxiv.org/content/10.6...
312144
Reposted by Kaitlyn Kiernan
Clausen Lab @clausenlab.bsky.social · 21/05/2026
Open Postdoc Position - Giant E3 ligases: mysterious mechanisms & non‑protein substrates. Interested? Join us to uncover how these molecular giants tag lipids, RNAs, sugars beyond proteins, on organelles and pathogens, to defend the cell. Details & Application here www.imp.ac.at/career/open-...
22836
Reposted by Kaitlyn Kiernan
Cress Lab @cresslab.bsky.social · 30/04/2026
Our lab is proud to present our latest work harnessing Bridge Recombinase for genome-scale editing in diverse bacteria, microbiome editing, and programmable horizontal gene transfer.
69851
Reposted by Kaitlyn Kiernan
Kenneth Loi @kenjmloi.bsky.social · 27/04/2026
Excited to share our discovery of a new programmable RNA-guided DNA-targeting system hiding inside bacteriophages that predates CRISPR. We call it VIPR (Viral Interference Programmable Repeat), and it uses an entirely new logic to find its targets. Thread + link below.
7448197
Reposted by Kaitlyn Kiernan
Martin Loose @nartimsoole.bsky.social · 16/04/2026
Now out in its final form! www.science.org/doi/10.1126/...
science.org
Science | AAAS
35217
Reposted by Kaitlyn Kiernan
Tomas Pascoa @tomaspascoa.bsky.social · 14/04/2026
1/ Excited to share our preprint! 🥳 Degradation of aromatic compounds, including BTEX pollutants, requires highly endergonic aromatic ring reduction. Using #cryoEM and in situ #cryoET, we show how BCRII couples electron bifurcation modules in one giant redox machine www.biorxiv.org/content/10.6...
510237
Reposted by Kaitlyn Kiernan
Alexey Amunts @amunts.bsky.social · 07/04/2026
65 years after Peter Mitchell’s chemiosmotic theory, we report an association between ATP synthase and the electron transport chain. In the preprint led by @longzhou88.bsky.social, we describe a large supercomplex and show how the supramolecular organization contribute to oxidative phosphorylation 🧵
langtaosha.org.cn
A Supercomplex Incorporating Both Electron Transport Chain and ATP Synthase
The mitochondrial oxidative phosphorylation system powering most aerobic organisms is typically depicted as two spatially segregated machineries(1): electron transport chain complexes I-IV (ETC CI-CIV
37027
Reposted by Kaitlyn Kiernan
Hiten Madhani @hitenmadhani.bsky.social · 25/03/2026
Another banger from my UCSF/Genentech Hall colleagues Yifan Cheng and David Julius! www.nature.com/articles/s41...
nature.com
Structural energetics of cold sensitivity - Nature
Data from cryogenic electron microscopy combined with hydrogen–deuterium exchange mass spectrometry inform a mechanism for cold-evoked activation of the TRPM8 channel, providing a structural and ...
0379
Reposted by Kaitlyn Kiernan
Carter Lab @carter-lab.bsky.social · 24/03/2026
Excited to share our work on the structure and function of cytoplasmic lattices within mouse embryos. A collaborative effort with @niakanlab.bsky.social and work led by @kashishsingh.bsky.social and @inaharasimov.bsky.social . It is now out on BioRxiv: www.biorxiv.org/content/10.6...
620684
Reposted by Kaitlyn Kiernan
Jakob Farnung @jakobfarnung.bsky.social · 18/03/2026
The E3 ubiquitin ligase mechanism specifying target-directed microRNA degradation (TDMD) is now published! 🎉🍾 We, @bartellab.bsky.social and Schulman lab, describe how 2-RNA factors control protein degradation by recruiting an E3 ligase. @mpibiochem.bsky.social www.nature.com/articles/s41...
18538
Reposted by Kaitlyn Kiernan
cryoEM papers @cryoempapers.bsky.social · 17/03/2026
Structural Basis of Membrane Potential Coupled Vectorial CO2 Hydration by the DAB2 Complex in Chemolithoautotrophs www.biorxiv.org/content/10.64898/2026.03.13.711513v1 #cryoEM
011
Reposted by Kaitlyn Kiernan
John Rubinstein @johnrubinstein.bsky.social · 06/03/2026
I've written a review on what I think is an extremely exciting direction in cryo-EM: Cryo-EM of endogenous membrane proteins in their native lipid bilayer Open access in Quarterly Reviews of Biophysics: doi.org/10.1017/S003...
Figure 1. Cryo-EM of abundant protein complexes in native membranes.Figure 2. Cryo-EM of membrane proteins in vesicles.Figure 3. 3D reconstruction of V-ATPase in native synaptic vesicle membranes.Figure 4. Generation of membrane vesicles for structure determination of proteins in their native lipid bilayer.
317765
Reposted by Kaitlyn Kiernan
Brett Baker @archaeal.bsky.social · 18/02/2026
New paper from my team detailing a greatly expanded genomic database of Asgard archaea revealing of high energy metabolism those related to eukaryotes! Led by @katyappler.bsky.social lots of help from @jameslingford.bsky.social @valdeanda.bsky.social @kassipan.bsky.social doi.org/10.1038/s415...
1015161
Reposted by Kaitlyn Kiernan
Kranzusch Lab @kranzuschlab.bsky.social · 17/02/2026
Max Fels @mfels.bsky.social from our lab discovers giant DNA viruses that infect amoeba encode eIF4E and the entire suite of 4F complex proteins to control mRNA translation, including beautiful crystal structures of viral 4E bound to modified mRNA 5' caps: www.cell.com/cell/fulltex...
19336
Reposted by Kaitlyn Kiernan
Dimitry Tegunov @dtegunov.bsky.social · 16/02/2026
I had Claude make this as a mini-game for Relay's disconnect screen (like Chrome's dinosaur), but then pivoted to stand-alone. In this game, you have to find Euler angles matching the target projection, i.e. cosplay RELION. It can be pretty hard. Works on mobile too! warpem.github.io/euler-hunt/
warpem.github.io
Euler Hunt
Can you find the Euler angles of a cryo-EM projection?
04615
Reposted by Kaitlyn Kiernan
Seychelle Vos @voslab.org · 09/02/2026
🧪🧬New preprint We present cryo-EM structures of reconstituted CTCF–nucleosome complexes, showing CTCF dimerization drives nucleosome oligomerization into defined higher-order assemblies. Disrupting CTCF–CTCF interfaces in mESCs reduces looping and impairs differentiation. tinyurl.com/CTCF-nucleos...
412553
Reposted by Kaitlyn Kiernan
Luca Troman @lucatroman.bsky.social · 05/02/2026
🌀 How do spirochete bacteria swim through thick fluids like champions? We solved T. denticola flagella structure - asymmetric proteins expand one side, compress the other for perfect corkscrew motion! @debnathghosal.bsky.social 🔗 doi.org/10.64898/202... #StructuralBiology #CryoEM #Microbiology
03415
Reposted by Kaitlyn Kiernan
Max Planck Institute of Biochemistry @mpibiochem.bsky.social · 28/01/2026
Formation & function of #MembranelessOrganelles! #CryoET structures of #proteasome storage granules inside cells! Read our paper @cp-cell.bsky.social! ❕Publication: doi.org/10.1016/j.ce... ❕Press Release: www.biochem.mpg.de/en/pressroom @uoftmedicine.bsky.social @erc.europa.eu #UPSmeetMet
07226
Reposted by Kaitlyn Kiernan
Kelly Nguyen @kellythd-nguyen.bsky.social · 23/01/2026
Excited to share our latest work on dissecting the mechanism of processive telomeric DNA synthesis by telomerase. Led by amazing PhD student Sebastian Balch in collaboration with lab members,@automnenine.bsky.social @rachael-kretsch.bsky.social,@rdaslab.bsky.social. www.nature.com/articles/s41...
nature.com
Structures of nucleotide-bound human telomerase at several steps of its telomeric DNA repeat addition cycle - Nature Communications
To maintain genome stability, the specialised reverse transcriptase telomerase processively adds telomeric DNA repeats to chromosome ends. Here the authors reported structures of human telomerase at t...
25215
Reposted by Kaitlyn Kiernan
Nature @nature.com · 16/01/2026
Nature research paper: A nowhere-to-hide mechanism ensures complete piRNA-directed DNA methylation go.nature.com/4pDVgPq
go.nature.com
A nowhere-to-hide mechanism ensures complete piRNA-directed DNA methylation - Nature
In mice, a SPOCD1–TPR-dependent ‘nowhere-to-hide’ mechanism is required for complete non-stochastic piRNA-directed LINE1 DNA methylation by preventing transposons from escaping surveillance within heterochromatin.
0175
Reposted by Kaitlyn Kiernan
Vanni Lab at UNIFR, Switzerland @labvanni.bsky.social · 12/01/2026
Happy to finally share the amazing results of our long-term collaboration with Karin Reinisch’s lab on how bridge lipid-transfer proteins (BLTPs) cooperate with partner proteins to orchestrate lipid delivery. A quick thread (1/7) www.biorxiv.org/content/10.6...
513450
Reposted by Kaitlyn Kiernan
Charles Bayly-Jones @charlesbj.bsky.social · 08/01/2026
This figure captures how challenging the #cryoEM analysis was, but it doesn't capture the challenges we had to solve in molecular biology, biochemistry, purification, and functional testing. Every step was hard! So glad to see it available.
0408
Reposted by Kaitlyn Kiernan
Jakob Farnung @jakobfarnung.bsky.social · 06/01/2026
When RNA Degradation 🤝 meets 🤝 Protein Degradation! tinyurl.com/E3TDMD In a collaboration of @bartellab.bsky.social and Schulman lab, we show that, in target-directed microRNA degradation (TDMD), 2-RNA-factors recruit an E3 ligase and induce the degradation of not only a protein but also RNA (1/5).
111850