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Gautier Courbon

@courbongautier.bsky.social
355 followers 673 following 1 posts

Learning every day 🚀 Cryo-EM, infectious diseases, antimicrobials EMBO Postdoctoral Fellow in the Higgins lab @Oxford Previously Rubinstein lab @sickkids @UofT scholar.google.com/citations?user=o…

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Reposted by Gautier Courbon
Nobel Prize @nobelprize.org · 2h
BREAKING NEWS The 2026 Nobel Prize in Physiology or Medicine has been awarded to Karl Deisseroth, Peter Hegemann and Georg Nagel “for their discoveries concerning light-gated ion channels and optogenetics.”
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Michelle Fry @myfry.bsky.social · 02/10/2026
1/ 🧵 Two classic mitochondrial pathways the TCA cycle and OXPHOS are taught as linked but distinct pathways. I’m happy to share our new work out in @cp-cell.bsky.social showing that in Acanthamoeba they're physically linked—with a TCA enzyme incorporated in ATP synthase. www.cell.com/cell/fulltex...
cell.com
Acanthamoeba ATP synthase structure reveals the TCA cycle is tethered to OXPHOS
Acanthamoeba castellanii, a pathogenic amoeba, belongs to an evolutionary branch distinctly removed from humans and fungi. Cryo-EM of the organism’s ATP synthase enzyme using raw mitochondrial lysates...
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Structura Biotechnology @structurabio.bsky.social · 24/09/2026
🇨🇦 Today we kicked off our hands-on workshop, “Beyond Consensus Refinements: Advanced Cryo-EM Data Processing with CryoSPARC,” in collaboration with The Hospital for Sick Children @sickkidsto.bsky.social! Excited for two days of diving deeper into advanced #cryoEM data processing with #CryoSPARC. 🔬
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Basil Greber @bjgreber.bsky.social · 01/10/2026
Those who had a careful look at the methods section of our work on the #cryoEM structure of the CDK11-cyclin L-SAP30BP complex will have noticed that we added a short peptide to our sample before freezing. If you wonder why...
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John Rubinstein @johnrubinstein.bsky.social · 30/09/2026
A new PhD is formed. Congratulations @zestytoast.bsky.social on a spectacular defense! And thanks to Christina Stallings for serving as external examiner (and guest speaker)
Yingke opens door to be greeted by the lab after her defense
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Louis Ates @mycolates.bsky.social · 28/09/2026
Hey all, If you're interested in the work we do on designing mRNA encoded TB vaccines at BioNTech, check out this webinar I gave recently for the @isv-news.bsky.social webinar series. youtube.com/playlist?lis...
youtube.com
ISV Webinar Series - YouTube
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Reposted by Gautier Courbon
Rasmus Jensen @rasmusjensen.bsky.social · 25/09/2026
🎉 Out today in Cell: the paper I've been looking forward to sharing for a long time 🎉 We used cryo-ET to find a molecular machine nobody knew existed on the surface of a minimal bacterium, and worked out what it does. 🧵(1/7) #TeamTomo #cryoET
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Guillaume Gaullier @guillawme.eurosky.social · 02/09/2026
This paper was a nice side quest that started as a random encounter with @hrbridges.bsky.social at the poster session of the 2025 @ccpem.bsky.social Spring Symposium. It was very satisfying to finally see the macro domain of ALC1 that had escaped all previous structures of ALC1-nucleosome complexes!
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Alan Brown @alanbrownhms.bsky.social · 10/09/2026
Millions of beating cilia keep airways clean. At the base of each is the transition zone (TZ), a gate that controls which proteins enter and leave. In our paper out today in Science, we used cryo-FIB-ET to image the TZ inside human airway cells www.science.org/doi/10.1126/...
science.org
In situ structure of the human ciliary transition zone links linker defects to primary ciliary dyskinesia
The ciliary transition zone (TZ) regulates ciliary proteome composition, yet its molecular architecture, protein content, and contribution to motile ciliopathies remain poorly defined. We applied in situ cryo-electron tomography and subtomogram averaging ...
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Hauke Hillen @haukehillen.bsky.social · 11/09/2026
Happy to share our new preprint on the structure of the human mitochondrial RNA degradosome, a central player in organellar RNA metabolism! Work led by graduate student @paulafprado.bsky.social in our group. www.biorxiv.org/content/10.6... 🧵 1/9
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Kasinath-Lab @kasinath-lab.bsky.social · 04/09/2026
🚨🚨New preprint from ***Outstanding*** graduate student Jessica Song 🚨🚨 Jessica determined several cryo-EM structures (one at 2.5 Å) capturing, for the first time, protein recognition of a pUG-fold RNA & revealing how pUG-fold RNA inhibits DNMT1 activity through multiple modes. tinyurl.com/398ukze9
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Martin Steinegger 🇺🇦 @martinsteinegger.bsky.social · 30/08/2026
Run AlphaFold2 locally in your browser via WebGPU, no installation needed, it's just a static webpage using your own GPU or CPU. Short proteins run in seconds. Larger ones are still slow: a 291-aa protein takes ~7 minutes on my M4 Pro. ❗It's just a PoC. 🌐 martin-steinegger.github.io/alphafold2-w...
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Nature Structural & Molecular Biology @natsmb.nature.com · 29/08/2026
ICYMI: New online: Universal pipeline for high-resolution GPCR structure determination
dlvr.it
Universal pipeline for high-resolution GPCR structure determination
Nature Structural & Molecular Biology, Published online: 28 August 2026; doi:10.1038/s41594-026-01869-6Kojima et al. introduce NOAH–ARK1, a universal pipeline combining computational screening and a de novo designed fusion protein to reduce construct optimization effort and enable rapid high-resolution G-protein-coupled receptor structure determination for drug discovery.
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Tanmay Bharat @tbharat-lab.bsky.social · 23/08/2026
Molecular architecture of colossal surface layers from hyperthermophilic archaea Led by @idocaspy.bsky.social (Ido) In collaboration with @mkrupovic.bsky.social and @vikramalva.bsky.social labs doi.org/10.64898/202...
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bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 19/08/2026
Powering methanogenesis from fatty acids by a twin-heme-mediated reverse redox-loop www.biorxiv.org/content/10.64898/20…
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Matt Higgins @parasitematt.bsky.social · 20/08/2026
How do African trypanosomes regulate the complement system? Check out our new study from @BiochemCook, in which he identified a new trypanosome receptor which binds to the core C3bBb convertase of the complement system and blocks its activity. Real all about it! doi.org/10.64898/202...
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Rhys Grinter @rhyswg.bsky.social · 18/08/2026
Out now in @natmicrobiol.nature.com: Bacillus subtilis builds protein filaments that act as a pseudomembrane, pulling quinone out of the bilayer and carrying it into the cytosol for reduction by NADH dehydrogenase, well away from the membrane itself. doi.org/10.1038/s415... 1/5
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Lars-Anders Carlson @lacarlson.bsky.social · 17/08/2026
Open PI position in infection biology at Umeå University, deadline 15 September. MIMS is the Swedish node of the Nordic EMBL partnership and offers "EMBL-style" group leader positions. Great resources and infrastructure in a friendly environment. www.umu.se/en/mims/ 1/2
umu.se
MIMS
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Jamie Blaza @jnb-lab.bsky.social · 17/08/2026
Our preprint is now published!
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Matt Johnson @drmatthewcjohnson.bsky.social · 11/08/2026
Interested in a career in industry cryoEM? We're hiring! We seek a cryoEM/cryoET expert to join our team at Genentech advance our mission to provide high-resolution structural insights into biological macromolecules involved in health and disease. Apply at: careers.gene.com/us/en/job/20...
careers.gene.com
Systems Specialist II in South San Francisco, California, United States of America | Manufacturing & Engineering at Genentech
Apply for Systems Specialist II job with Genentech in South San Francisco, California, United States of America. Manufacturing & Engineering at Genentech
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Lis Lowe @lislowe.bsky.social · 15/08/2026
New preprint out - Jenn’s hard work over the last few years collaborating with @jnb-lab.bsky.social, Overkleeft Lab in Leiden, Spencer Williams, Hannah Bridges at Cryosparc and @pmoyniha.bsky.social. Feat. her beautiful 1.5A cryo structure with a covalent inhibitor 😍. www.biorxiv.org/content/10.6...
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henrietteautzen.bsky.social @henrietteautzen.bsky.social · 12/08/2026
Happy to see our NHE6 story published today in @natcomms.nature.com! Led by @lukasfeilen.bsky.social we reveal the #cryoEM structure, ion selectivity and regulation of the endosomal Na+/H+ exchanger NHE6, providing a framework for understanding Christianson syndrome. www.nature.com/articles/s41...
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Jamie Blaza @jnb-lab.bsky.social · 10/08/2026
Permanent academic position as a Lecturer in cryo-ET open at York. We are looking for someone to lead a research program making the most of the stunning advances occurring in cryo-ET. It's a research and teaching post but with a focus on research in the early years. jobs.york.ac.uk/vacancy/lect...
jobs.york.ac.uk
Jobs - The University of York
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Saloni @scientificdiscovery.dev · 07/08/2026
I find this, 1806 letter from Thomas Jefferson to Edward Jenner, so moving 🥺
To Dr. Edward Jenner Monticello, May 14, 1806
The Letters of Thomas Jefferson

SIR,
-- I have received a copy of the evidence at large respecting the discovery of the vaccine inoculation which you have been pleased to send me, and for which I return you my thanks. Having been among the early converts, in this part of the globe, to its efficiency, I took an early part in recommending it to my countrymen. I avail myself of this occasion of rendering you a portion of the tribute of gratitude due to you from the whole human family. Medicine has never before produced any single improvement of such utility. Harvey's discovery of the circulation of the blood was a beautiful addition to our knowledge of the animal economy, but on a review of the practice of medicine before and since that epoch, I do not see any great amelioration which has been derived from that discovery. You have erased from the calendar of human afflictions one of its greatest. Yours is the comfortable reflection that mankind can never forget that you have lived. Future nations will know by history only that the loathsome small-pox has existed and by you has been extirpated.

Accept my fervent wishes for your health and happiness and assurances of the greatest respect and consideration.
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Structural Biology @actacrystd.iucr.org · 06/08/2026
August issue is out! journals.iucr.org/d/issues/202... The cover highlights SURFER, a lightweight GPU-accelerated extension for UCSF ChimeraX that enables rapid semantic differentiation of membrane or membrane-mimic density from macromolecular signal in cryo-EM maps. More at doi.org/10.1107/S205...
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Pedro Beltrao @pedrobeltrao.bsky.social · 06/07/2026
My department @eth-dbiol.bsky.social at ETH Zurich is hiring for a tenured professor in mol cell bio and biochemistry (associate/full). The position is within the Institute of Biochemistry (www.bc.biol.ethz.ch) and it is fairly open within their scope of research. www.nature.com/naturecareer...
nature.com
Professor of Molecular Cell Biology and Biochemistry - Zurich, Switzerland job with ETH Zurich | 12861386
The Department of Biology at ETH Zurich invites applications for the above-mentioned tenured professorship at the Institute of Biochemistry
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Saloni @scientificdiscovery.dev · 03/08/2026
TFW you realize the heat-stable version of the smallpox vaccine, used for global smallpox eradication, was invented by a graduate student as part of his MD thesis pmc.ncbi.nlm.nih.gov/articles/PMC...
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Nathan Day @nthndy.bsky.social · 28/07/2026
Very pleased to announce that my Crick postdoc work has just been published in Nature Communications: www.nature.com/articles/s41... Big thank you to @bpradel.bsky.social, @jaksonluk.bsky.social, @maxgg.bsky.social and the rest of the host-pathogen interactions in TB lab that made it all possible!
nature.com
Fast-growing intracellular Mycobacterium tuberculosis populations evade antibiotic treatment - Nature Communications
The slow growth displayed by Mycobacterium tuberculosis has been historically associated with pathogen’s persistence and drug tolerance. Unexpectedly, here the authors identify a rare subpopulation of...
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Da-Neng Wang @danengw.bsky.social · 28/07/2026
Congratulations to Ellen Zhong, Princeton University, for receiving the 2026 K.H. Kuo Award for Outstanding Young Scientist in Structural Biology www.bsc.org.cn/KuoSymposium...
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Da-Neng Wang @danengw.bsky.social · 28/07/2026
Congratulations to Chris Russo, MRC Laboratory of Molecular Biology, for receiving the 2026 K.H. Kuo Award for Distinguished Scientist in Biological Electron Microscopy www.bsc.org.cn/KuoSymposium...
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 30/06/2026
Pls share: U of Washington has an opening for a tenure-track faculty position at the rank of Assistant Professor. This position is expected to specialize in molecular virology or bacteriology. Here is a link: microbiology.washington.edu/index.php/ne...
microbiology.washington.edu
Micro is Hiring! | UW Microbiology
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Basil Greber @bjgreber.bsky.social · 24/07/2026
Happy that our most recent paper on nucleotide excision repair mechanisms has now been published in Science Advances. This project was led by @natalia-mg.bsky.social and @callumhaste.bsky.social and focused on visualising early steps of the NER process by #cryoEM. www.science.org/doi/10.1126/...
science.org
Visualization of stepwise derepression of TFIIH in global genome nucleotide excision repair
Cryogenic electron microscopy captures nucleotide excision repair complexes assembling on damaged DNA templates.
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Michael Glickman @michaelglickman.bsky.social · 23/07/2026
Please repost! #microsky🦠 The Glickman Lab at MSK is recruiting! Projects in Mtb pathogenesis, basic biology of mycobacteria, and mycobacterial cancer therapies. See our publications here: tinyurl.com/3f386f4x Send CV and cover letter to: glickmanmycolab@gmail.com
scholar.google.com
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Nature @nature.com · 23/07/2026
Nature research paper: Structural basis of the RNA-editing cascade in trypanosome mitochondria go.nature.com/3T9HlWV
go.nature.com
Structural basis of the RNA-editing cascade in trypanosome mitochondria - Nature
Cryo-electron microscopy sheds light on the architecture of the Trypanosoma brucei mitochondrial editosome and reveals how this assembly mediates mRNA editing through the insertion and deletion of uridine nucleotides.
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Nogales Lab @nogaleslab.bsky.social · 20/07/2026
Thrilled to share our collab led by Grace Hibshman with the Shipman lab! Type IX retron-Kva2 structure reveals phage detection via an HTH fold, not a primary sequence. We computationally designed triggers that program bacteria cell death, pointing toward designer antimicrobials.
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Kaitlyn Abe @kaitlynabe.bsky.social · 16/07/2026
1/5: Our latest preprint is out! We show that LEA proteins can diversify particle orientations in cryo-EM, helping to overcome preferred orientation at the air-water interface (AWI). www.biorxiv.org/cgi/content/... with @cijilim.bsky.social and Tim Grant #CryoEM #LEAproteins
biorxiv.org
Diversifying particle-orientation distributions in cryo-EM with LEA protein additives
Preferential orientation at the air-water interface (AWI) remains a persistent challenge in cryo-electron microscopy, often requiring extensive optimization or specialized grid preparation strategies....
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Harmit Singh Malik @harmitmalik.bsky.social · 16/07/2026
He is a remarkably gifted scientist but he is also a welcome reminder to me that the best ideas in a lab often come from the imagination of trainees. Yiu can read about his integrin work here: www.science.org/doi/10.1126/... and in a preprint we hope to post later this year (watch this space)
science.org
Molecular exaptation by the integrin αI domain
An ancient protein domain insertion seamlessly preserved conformational signaling while providing a novel surface for adaptation.
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Structura Biotechnology @structurabio.bsky.social · 14/07/2026
✉️ The latest #CryoSPARC Newsletter is out! Highlights include: 🔹 Sept 2026 workshop hosted with SickKids 🇨🇦 🔹 New cryosparc-tools video 🔹 New case study on discrete heterogeneity 🔹 Small-protein #cryoEM advances 🔹 Dynamic masking guide (v5) Read more here: mailchi.mp/b8fb173dac5c...
Sign up for the newsletter: https://cryosparc.com/#newsletter
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Sophia Paul @sophia-pa.bsky.social · 08/07/2026
Excited to share my paper! 🥳 Today in #Nature we reveal an 8 MDa Hdr electron bifurcating super-assembly in class I methanogens that couples the first and last steps of hydrogenotrophic methanogenesis. A lineage-specific adaptation to anaerobic niches. www.nature.com/articles/s41...
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John Rubinstein @johnrubinstein.bsky.social · 06/07/2026
CryoSPARC workshop in Toronto! Beyond consensus refinements: Advanced cryo-EM data processing with CryoSPARC Sept 24-25, 2026 (part of the Canadian Cryo-EM Nexus) Register here: cvent.me/dL1wem Please see details in the link or the image Alt text @structurabio.bsky.social @sickkidsto.bsky.social
Workshop announcement graphic shows a classroom scene with the CryoSPARC logo and workshop title, date, and hosting organizations (SickKids and Structura Biotechnology)

Workshop information:
As part of the Canadian Cryo-EM Nexus, The Hospital for Sick Children (SickKids) and Structura Biotechnology are pleased to announce a two-day CryoSPARC workshop:

Beyond consensus refinements: Advanced cryo-EM data processing with CryoSPARC

at SickKids in Toronto on September 24-25, 2026.

Led by experts from Structura, this workshop offers a unique opportunity for participants who already have a sound understanding of cryo-EM and substantial CryoSPARC experience to deepen their skills and become a key resource for cryo-EM image analysis within their institutions.

There is $115 (CAD) charge to partially defray some of the costs of running the workshop, which is sponsored by SickKids and Structura. Attendees will need to bring their own laptop computer and arrange for travel and accommodation.
Please apply before July 24, 2026 using the following link:
https://cvent.me/dL1wem
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trisre.bsky.social @trisre.bsky.social · 06/07/2026
1/ Happy to share our preprint! The Mtr complex catalyses the second-to-last step of the methanogenesis and is an essential bioenergetic machine in most methanogenic archaea. Anaerobic cryo-EM of Mtr reveals a nitrogenase-like metallocluster bound at its active site! www.biorxiv.org/content/10.6...
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John Rubinstein @johnrubinstein.bsky.social · 04/07/2026
New preprint! Karin Schumacher's postdoc Nadja used our SidK approach to purify Arabidopsis V-ATPase & Mariia Khamina determined its structure. The structure shows unique plant V-ATPase features and that TLDc proteins (here OXR5) bind V-ATPase in all eukaryotes. 🌱 tinyurl.com/mw9xaszk
Overall structure of Arabidopsis V-ATPase. (A) SDS-PAGE of purified V-ATPase. (B) Composite map of Arabidopsis V-ATPase in rotational state 1. (C) Atomic model of Arabidopsis V-ATPase in rotational state 1. (D) Cross sections of the V1 and VO regions in three rotational states. (E) Conformations of subunit H in V-ATPase structures of Arabidopsis V-ATPase (top) and the citrus fruit (bottom) V-ATPase.V-ATPase from the TGN/EE interacts with the TLDc protein OXR5. (A) Composite map of Arabidopsis V-ATPase in rotational state 1 bound to OXR5 (green density). (B) AlphaFold3 model (left) and domain organisation (right) of OXR5. (C) VHA-a1-mNG is localized at the TGN/EE. OXR5-PmScarlet-I shows partial overlap with VHA-a1-mNG at the TGN/EE. Scale bar, 20 µm. Root tip elongation zone of 5-day-old Arabidopsis seedlings were analyzed by confocal laser scanning microscopy. (D-H) Atomic model of Arabidopsis V-ATPase interactions with OXR5.
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Richard Sever @richardsever.bsky.social · 03/07/2026
Last month was another record for bioRxiv submissions. The pandemic surge and lag now clearly in the past and the growth continues. Thanks as ever to all the authors, readers affiliates, funders and amazing internal openRxiv team who make this happen!
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cryoEM papers @cryoempapers.bsky.social · 03/07/2026
Cryo-EM structure of the Arabidopsis thaliana V-type ATPase www.biorxiv.org/content/10.64898/2026.07.01.735876v1 #cryoEM
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bioRxiv Biochemistry @biorxiv-biochem.bsky.social · 02/07/2026
Cryo-EM structure of the Arabidopsis thaliana V-type ATPase www.biorxiv.org/content/10.64898/20…
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Oli Clarke @olibclarke.bsky.social · 02/07/2026
More weird RNAs! 🤯
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Chi-Min Ho @cmholab.bsky.social · 30/06/2026
Incredibly proud of Messi Haile @mehsehret.bsky.social, a founding member of the Ho Lab, for her beautiful work uncovering the inner workings of a central piece of the malaria parasite invasion machinery: the malarial moving junction, out today in @cellpress.bsky.social! tinyurl.com/4p3md2eb 🦠❄️🔬
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Lis Lowe @lislowe.bsky.social · 25/06/2026
Out after a lot of hard work from many people. When we first found arabinanase enzymes in mycobacteria we started looking into their roles in cell remodelling & pathogenesis. Did not expect to find that some species had weaponised them to kill competitors! Myco are endlessly surprising. #glycotime
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Wieczorek Lab @mike-wieczorek.bsky.social · 23/06/2026
New preprint! In collaboration with the Steinmetz Lab at PSI we report cryo-EM structures of microtubules at up to 1.9 Å (!) resolution & in different nucleotide state mimics, suggesting a mechanism for lattice-induced GTP hydrolysis and why it leads to catastrophe: tinyurl.com/7cjrf863
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Lena Schindler @lena-schindler.bsky.social · 23/06/2026
I am thrilled to share my PhD work with @nicolettapetridou.bsky.social @embl.org: www.biorxiv.org/cgi/content/... A fun collaboration with Bernat Corominas-Murtra, Adrián Aguirre-Tamaral, @bart-smeets.bsky.social , Jef Vanghel and Tom Belpaire! Read the story in the comments below ⤵️
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