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Kaitlyn Abe

@kaitlynabe.bsky.social
82 followers 72 following 8 posts

Biophysics Grad Student @ UW Madison in the Lim Lab || UC Davis Alum || she/her

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Kaitlyn Abe @kaitlynabe.bsky.social · 16/07/2026
1/5: Our latest preprint is out! We show that LEA proteins can diversify particle orientations in cryo-EM, helping to overcome preferred orientation at the air-water interface (AWI). www.biorxiv.org/cgi/content/... with @cijilim.bsky.social and Tim Grant #CryoEM #LEAproteins
biorxiv.org
Diversifying particle-orientation distributions in cryo-EM with LEA protein additives
Preferential orientation at the air-water interface (AWI) remains a persistent challenge in cryo-electron microscopy, often requiring extensive optimization or specialized grid preparation strategies....
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Kaitlyn Abe @kaitlynabe.bsky.social · 09/01/2026
It is so exciting to see our LEA proteins playing a role in solving this insane structure. Amazing work to the authors!
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Reposted by Kaitlyn Abe
Ci Ji (CJ) Lim @cijilim.bsky.social · 30/10/2025
Our paper in Science is out! @souravagrawal.bsky.social, @rlynn.bsky.social, @susvirkar.bsky.social, and the rest of the team show human RPA is a telomerase processivity factor essential for telomere maintenance. This reshapes our thinking about telomerase regulation. www.science.org/doi/10.1126/...
science.org
Human RPA is an essential telomerase processivity factor for maintaining telomeres
Telomerase counteracts telomere shortening by repeatedly adding DNA repeats to chromosome ends. We identified the replication protein A (RPA) heterotrimer as a telomerase processivity factor critical ...
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Reposted by Kaitlyn Abe
James A. Letts @lettsscience.bsky.social · 19/06/2025
Our new preprint revealing a new mechanism of mitochondrial disease pathophysiology: the accumulation of toxic complex I intermediates bound to complex III www.biorxiv.org/content/10.1...
biorxiv.org
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Kaitlyn Abe @kaitlynabe.bsky.social · 04/09/2024
I am thrilled to share that our manuscript on using LEA proteins to prevent air-water interface damage to fragile samples for cryo-EM is officially out! #CryoEM doi.org/10.1038/s414...
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Reposted by Kaitlyn Abe
Ci Ji (CJ) Lim @cijilim.bsky.social · 09/02/2024
1/3: Led by @kaitlynabe.bsky.social, we found small LEA proteins from nematodes and tardigrades (water bears!) to be incredibly effective in protecting two test fragile complexes - human DNA polymerase alpha-primase and polycomb repressive complex 2 - from AWI damage during plunge freezing.
Mascot of water bear to the rescue! (drawn by Kaitlyn Abe, lead author)
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Reposted by Kaitlyn Abe
Ci Ji (CJ) Lim @cijilim.bsky.social · 09/02/2024
Exhausted with trying multiple ways to combat the air-water interface (AWI) problem during sample grid plunge freezing? We may have an easy solution for you! Read our latest preprint on how we use LEA proteins as AWI sample protectants for challenging samples: www.biorxiv.org/content/10.1...
biorxiv.org
Small LEA proteins as an effective air-water interface protectant for fragile samples during cryo-EM grid plunge freezing
Sample loss due to air-water interface (AWI) interactions is a significant challenge during cryo-electron microscopy (cryo-EM) sample grid plunge freezing. We report that small Late Embryogenesis Abundant (LEA) proteins, which naturally bind to AWI, can protect samples from AWI damage during plunge freezing. This protection is demonstrated with two LEA proteins from nematodes and tardigrades, which rescued the cryo-EM structural determination outcome of two fragile multisubunit protein complexes. ### Competing Interest Statement The authors have declared no competing interest.
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Kaitlyn Abe @kaitlynabe.bsky.social · 09/02/2024
I am excited to share that my work with @cijilim.bsky.social on protecting fragile samples from air-water-interface damage during cryo-EM plunge freezing is in preprint! www.biorxiv.org/content/10.1...
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