Sign in

Hayden Nunley

@haysconun.bsky.social
56 followers 76 following 4 posts

Oklahomo. Associate Research Scientist at #FlatironCCB. The opinions expressed are my own.

PostsRepliesMedia
Reposted by Hayden Nunley
Nicole CL Noel @nclnoel.bsky.social · 21/09/2026
My work on the turquoise killifish photoreceptor mosaic was published last week - check it out if you’re interested in photoreceptors, cell organization, and pretty pictures! onlinelibrary.wiley.com/doi/10.1002/...
onlinelibrary.wiley.com
Ordered Chaos: Photoreceptor Mosaics in the Larval and Adult Turquoise Killifish (<i>Nothobranchius furzeri</i>)
The annual turquoise killifish (Nothobranchius furzeri) cone photoreceptor mosaic is an ordered lattice but lacks regularity of cone subtypes in adulthood. The cone mosaic differs between life stages...
24519
Reposted by Hayden Nunley
Buzz Baum @buzzbaum.bsky.social · 11/09/2026
If you thought you understood how one cell becomes two (and imagined studying the problem using an organism that lives in deep sea volcanic vents was impossible), read Florian’s paper and think again!
25020
Reposted by Hayden Nunley
Ankita Jha @ankita13jha.bsky.social · 10/09/2026
A beautiful spotlight on our recent work on the polarity maintenance in bleb-based motility in metastatic cancer cells by @vickysanzmoreno.bsky.social and Dipanwita Das is published in Developmental Cell.
1248
Reposted by Hayden Nunley
sandraduharcourt.bsky.social @sandraduharcourt.bsky.social · 08/09/2026
Very happy to see our Nature Reviews Genetics article on programmed DNA elimination across eukaryotes out! A fantastic collective effort with an amazing group of colleagues, born from inspiring discussions at the Fondation des Treilles. rdcu.be/tmvKgsPZNhBa @laurarossevo.bsky.social
rdcu.be
39343
Reposted by Hayden Nunley
Anh Hoang Le, PhD 🏳️‍🌈🏴󠁧󠁢󠁳󠁣󠁴󠁿🇻🇳 @anhhle2702.bsky.social · 07/09/2026
Very happy to share my postdoc paper is out now in @natcellbio.nature.com titled "Tissue flow acts as a guidance cue for immune cell polarization and directional migration". If you love imaging and immune cells, this is for you! #microscopymonday www.nature.com/articles/s41... A 🧵: 1/n
18393106
Reposted by Hayden Nunley
Xavier Trepat @xaviertrepat.bsky.social · 06/08/2026
When tension increases, the nucleus escapes. New paper out in @natphys.nature.com. Check out Tom's thread for a summary 👇
03612
Reposted by Hayden Nunley
Flatiron Institute @flatironinstitute.org · 23/06/2026
Researchers at #FlatironCCB are investigating how the collective movement of giant sperm in fruit flies gives rise to folded layers of motion. Read more about their new hypothesis: bit.ly/4oKB2Vx #science #biology
bit.ly
Mysteries of Fruit Fly Sperm Untangled by Mathematical Models
Biologists at the Flatiron Institute’s Center for Computational Biology used mathematical models to improve our understanding of sperm structure and function.
062
Reposted by Hayden Nunley
Max Planck Institute of Molecular Cell Biology and Genetics @mpi-cbg.de · 23/06/2026
ERC Advanced Grant @erc.europa.eu for @mpi-cbg.de director Stephan Grill @grill-lab.bsky.social! 🎉 He receives 2.5 million euros for his project “DNA Sequence-Dependent Structure Formation in the Cell Nucleus.” Congratulations! 🥳 🥳 🥳 www.mpi-cbg.de/news-outreac...
mpi-cbg.de
ERC Advanced Grant for Stephan Grill
European Research Council funds research project on physical foundation for sequence-guided genome organization with 2.5 million euros
3494
Reposted by Hayden Nunley
ABC News Australia @news.abc.net.au · 11/06/2026
Scientists discover 149 new marine species off Christmas and Cocos (Keeling) Islands
abc.net.au
New species found in Australia's most 'pristine' marine parks
Researchers have catalogued dozens of new marine species found in the depths of Australia's most remote waters. The result is a window into a rarely glimpsed world.
692765682
Reposted by Hayden Nunley
Elena Scarpa & The Squeezable Cells Lab @squeezycellslab.bsky.social · 10/06/2026
We are thrilled to announce our new preprint from the wonderful @sorayavillaseca.bsky.social Ever wondered how cells squeeze through tiny spaces in embryos? Neural crest cells use Dynein to transport their nucleus along microtubules. Check out the preprint!! www.biorxiv.org/content/10.6...
46926
Reposted by Hayden Nunley
Samuel Sledzieski @samsl.io · 28/04/2026
Introducing MIMIC: a new foundation model trained natively across DNA, RNA and proteins. MIMIC is multimodal and generative: it can use structure, regulation, evolution, and experimental context to infer missing biology or design new sequences. 🧵⬇️
1209
Reposted by Hayden Nunley
Simons Foundation @simonsfoundation.org · 25/04/2026
On his birthday, we're remembering our late co-founder Jim Simons — a true visionary in mathematics, investing and philanthropy. #science #math
0114
Reposted by Hayden Nunley
Alison Kickuth @alisonkickuth.bsky.social · 07/01/2026
Really happy to see my PhD first-author paper published in @nature.com! I’m very grateful to have worked with such a great team. Huge thanks to Urša Uršič, Michael Staddon, and Jan Brugués, as well as the @brugueslab.bsky.social, and the @poldresden.bsky.social and @mpi-cbg.de community!
58212
Reposted by Hayden Nunley
Marine Biological Laboratory @mblscience.bsky.social · 27/12/2025
Interested in the MBL Physiology Course and want to learn more before you apply? Join our Virtual Open House on Tues, Jan 6, 2026 | 2–3 PM ET to meet the team, hear what the course experience is like, and get your questions answered. 🔗 Register/Join: go.mbl.edu/r5q
1266
Reposted by Hayden Nunley
Current Biology @currentbiology.bsky.social · 19/12/2025
HAPPY HOLIDAYS TO ALL OF YOU!🎄✨
434064
Hayden Nunley @haysconun.bsky.social · 11/12/2025
The Center for Computational Biology at the Flatiron Institute is accepting applications for summer intern positions. CCB is a great place to work, and the intern program is excellent. Please check out the Computer Vision and Developmental Dynamics groups in particular. apply.interfolio.com/177779
apply.interfolio.com
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
034
Reposted by Hayden Nunley
Dan 🐟 C @zebrafish007.bsky.social · 02/12/2025
Exciting new #Zebrafish research from the #WeinsteinLab, led by Jong Park! “Specialized gas-exchange endothelium of the zebrafish gill” — www.biorxiv.org/content/10.6... Amazing to see red blood cells moving through the gills! Don’t forget to check out the supplemental movies ;-)
342197324
Reposted by Hayden Nunley
Yaniv Elkouby @yanivelkouby.bsky.social · 26/11/2025
Now out from our lab in @currentbiology.bsky.social! An mTOR-Stat3-Stathmin pathway controls #centrosome and #microtubule dynamics for #oocyte polarization www.cell.com/current-biol...
23610
Hayden Nunley @haysconun.bsky.social · 25/11/2025
It was a joy to co-organize this meeting. The work presented and discussed at the meeting was exceptional. The experimental methods for quantifying key aspects of germ cell development are getting better — and the time is ripe for proposing and testing mathematical modeling of these processes!
021
Reposted by Hayden Nunley
Bardin Lab @bardinlab.bsky.social · 21/11/2025
Congrats Ben, Claude, et al! A beautiful characterization of roles of Ca++ waves and gap junction functions in tissue patterning! www.science.org/doi/10.1126/...
science.org
Retinal calcium waves coordinate uniform tissue patterning of the Drosophila eye
Optimal neural processing relies on precise tissue patterning across diverse cell types. Here, we show that spontaneous calcium waves arise among non-neuronal support cells in the developing Drosophil...
044
Reposted by Hayden Nunley
Current Biology @currentbiology.bsky.social · 20/11/2025
Check out our latest issue where we interview Cassandra Extavour, who studies the evolution of the genetic mechanisms employed during early animal embryogenesis to specify cell fate, development, and differentiation at Harvard University. www.cell.com/current-biol...
cell.com
Q & A
Interview with Cassandra Extavour, who studies the evolution of the genetic mechanisms employed during early animal embryogenesis to specify cell fate, development, and differentiation at Harvard Univ...
04622
Reposted by Hayden Nunley
Yaniv Elkouby @yanivelkouby.bsky.social · 19/11/2025
Was a pleasure to participate in ScoRe - Scientific Conference On REproduction - celebrating 150/y since the observation of sperm and egg pronuclear fusion in @flatironinstitute.org. A stellar gathering discussing all things germ cells! Thanks @haysconun.bsky.social, Stas Shvartsman for the invite!
031
Reposted by Hayden Nunley
Nature Reviews Molecular Cell Biology @natrevmcb.nature.com · 11/11/2025
New Online! Signal control during tissue regeneration in adult animals
bit.ly
Signal control during tissue regeneration in adult animals
Nature Reviews Molecular Cell Biology, Published online: 11 November 2025; doi:10.1038/s41580-025-00917-1The ability to track single cells in vivo, combined with insights into chromatin structure, immune–tissue crosstalk, bioelectric and metabolic cues and quantitative modelling, is changing our understanding of how tissues are repaired and renewed. This Review discusses how signals are regulated during regeneration and future directions for a more quantitative understanding of regenerative biology.
093
Reposted by Hayden Nunley
The Francis Crick Institute @crick.ac.uk · 10/10/2025
This image shows neurons being grown on a surface with tiny patterns that resemble human tissue to ‘steer’ their growth. Models like this allow us to learn more about our nervous system and conditions like motor neurone disease. Image credit: Cathleen Hagemann and @andreaserio.bsky.social
Four large circular bulbs are spread out like a square. Between the colourful bulbs, and in the background, are long, differently-coloured tendrils, which take up most of the rest of the image.
1414
Reposted by Hayden Nunley
Oded Rechavi @odedrechavi.bsky.social · 29/09/2025
Got to love studies that were clearly conducted "for the love of the game" (“self-decapitating sea slugs”, “plants that see and use that for mimicry”, “worms that jump in the air”, aka papers you sometimes find in @currentbiology.bsky.social ) References to all of this bellow👇
37213
Reposted by Hayden Nunley
Daniel Alber @danielalber.bsky.social · 18/09/2025
A ring of cells deforms into a triangular keyhole in just 15 minutes. Meet the hindgut, a model for boundary-driven morphogenesis! Out now in @pnas.org at doi.org/10.1073/pnas... with @zhaoshh.bsky.social, Alex Jacinto, Eric Wieschaus, Stas Shvartsman, @lepuslapis.bsky.social (1/8)
36922
Reposted by Hayden Nunley
Paul Francois @pfrancois.bsky.social · 09/09/2025
Super impressive study by the group of Stefano di Talia on the segmentation of zebrafish notochord. There might even be a SNIC ! www.biorxiv.org/content/10.1...
biorxiv.org
Tissue-wide, synchronous Erk oscillations time the segmentation of the zebrafish notochord
The generation of a periodic body plan is a fundamental property of vertebrates. While biological oscillators provide a mechanism for timing the formation of repeated structures, few examples of signa...
0163
Reposted by Hayden Nunley
Lendert Gelens @lendertgelens.bsky.social · 02/09/2025
🧵Does the nucleus set the cell cycle clock? 🕒 In frog egg extract “mini-cells” we see that as nuclei grow, cycles slow down. The period scales with the nuclear-to-cytoplasmic ratio, across Xenopus species, and even when DNA replication or transcription are blocked. 👉 doi.org/10.1016/j.cu...
1195
Reposted by Hayden Nunley
James Briscoe @jamesbriscoe.bsky.social · 14/08/2025
Latest on Waddington Landscapes: Computational methods to fit dynamical landscapes directly to single cell data Applied to neural tube patterning shows morphogen-signalling landscapes can be linearly interpolated Connects interpretable landscape models with data www.biorxiv.org/content/10.1...
biorxiv.org
Reconstructing Waddington's Landscape from Data
The development of a zygote into a functional organism requires that this single progenitor cell gives rise to numerous distinct cell types. Attempts to exhaustively tabulate the interactions within d...
26724
Reposted by Hayden Nunley
epithelial mechanics fan club @epimechfc.bsky.social · 10/08/2025
Synthetic materials accumulate damage with every mechanical challenge. Epithelial tissues are regularly loaded, yet healthy epithelia rarely rupture. Why? We are @epmech.bsky.social and @baldaufsci.bsky.social and in this thread we introduce you to cyclic loading. bsky.app/profile/epim...
13919
Reposted by Hayden Nunley
Shivani Dharmadhikari @sdharmadhikari.bsky.social · 07/08/2025
Rotation 1 introduced me to the amazing Physarum 😍💛 Amy, Zach, Ameya, @haysconun.bsky.social and Vita from @gladfelterlab.bsky.social were encouraging TA's.
182
Reposted by Hayden Nunley
Eszter Posfai @eposfai.bsky.social · 02/08/2025
Thrilled to share our work using live imaging to understand how Epiblast (future embryo proper) and Primitive Endoderm (future extraembryonic tissues) cell fates segregate in the preimplantation mouse embryo. Gargantuan effort led by amazing @rpkimyip.bsky.social, David Denberg and Denis Faerberg!
13812
Hayden Nunley @haysconun.bsky.social · 26/07/2025
Belated post, but I really enjoyed working as a theory buddy with the Gladfelter lab at MBL physiology. Was refreshing to work on an array of beautiful problems in fungi and slime molds. These big, syncytial cells challenge preconceptions about cell cycles, distribution of resources, and more.
071
Reposted by Hayden Nunley
Miro Astore @miroastore.bsky.social · 23/07/2025
That's a wrap! The results of the first #cryoEM heterogeneity challenge are up on biorxiv! biorxiv.org/content/10.110
biorxiv.org
34523
Reposted by Hayden Nunley
Yogesh Goyal @goyallab.bsky.social · 17/07/2025
Just noticed a super nice preview of our paper by @ditalialab.bsky.social and Alexandra Hiestand. As always, good editorial experience with @cp-cellsystems.bsky.social www.cell.com/cell-systems...
cell.com
Vascular scaling: A careful balancing act between proliferation and extrusion
How do vascular tissues grow with the rest of the developing organism postnatally? In this issue of Cell Systems, Pi et al. combine modeling with molecular biology to uncover how cell behaviors scale ...
1102
Reposted by Hayden Nunley
Mahsa Mofidi @mahsamofidi.bsky.social · 28/06/2025
Watch: 6 Science Short Films Created by Flatiron Institute Researchers and Filmmakers www.simonsfoundation.org/2025/06/18/w...
simonsfoundation.org
Watch: 6 Science Short Films Created by Flatiron Institute Researchers and Filmmakers
The two-week-long Symbiosis program yielded six experimental short films about basic science.
033
Reposted by Hayden Nunley
James Briscoe @jamesbriscoe.bsky.social · 10/06/2025
New work on dynamics of morphogen signaling: Cells decode BMP gradient via temporal integration of signaling level, not instantaneous thresholds. While GRN gates response to provide additional spatial input Morphogen signalling dynamics + GRN for tissue patterning www.biorxiv.org/content/10.1...
biorxiv.org
Rapid transcriptional response to a dynamic morphogen by time integration
During development, cells must interpret extracellular signals with speed and accuracy. While morphogen gradients pattern tissues, how cells respond to dynamic morphogens remains unclear. Here, we inv...
0438
Hayden Nunley @haysconun.bsky.social · 05/06/2025
Excited to share this newly published work: link.aps.org/doi/10.1103/... This is the product of a collaboration with Jianping Fu’s lab. We proposed a mathematical model for fate patterning by mechanical stresses. This model made a non-intuitive prediction that was confirmed by follow-up experiments.
link.aps.org
Generation of fate patterns via intercellular forces
A model for the generation of a cell fate pattern via a coupling between mechanical stress and cell fate is presented. $I\phantom{\rule{0}{0ex}}n$ $v\phantom{\rule{0}{0ex}}i\phantom{\rule{0}{0ex}}t\ph...
021
Reposted by Hayden Nunley
Lars Brudvig @lars-brudvig.bsky.social · 27/05/2025
What is this? Believe it or not, a plant in bloom! Conopholis americana goes by several common names (bear corn is my fave). As a parasitic plant, it lacks chlorophyll and does no photosynthesis. Rather, it connects to oak roots and thieves the resources it needs
Bear corn (Conopholis americana)Bear corn (Conopholis americana) in front of a black oak (Quercus velutina) tree
1526
Reposted by Hayden Nunley
Simons Foundation @simonsfoundation.org · 09/05/2025
In a new special series called “Science, Promise and Peril in the Age of AI,” @quantamagazine.bsky.social looks far beyond AI-based research tools to explore how #AI is changing what it means to do #science and what it means to be a scientist. www.quantamagazine.org/series/scien...
quantamagazine.org
AI Changes Science and Math Forever | Quanta Magazine
An exploration of how artificial intelligence is changing what it means to do science and math, and what it means to be a scientist.
022
Reposted by Hayden Nunley
Simons Foundation @simonsfoundation.org · 11/04/2025
Our short film about our co-founder Jim Simons was nominated for the @Telly Awards. Help amplify the story of his incredible life and contributions to math and basic science by voting for our film here: peoples.tellyawards.com/PublicVoting... #science #philanthropy
0133
Reposted by Hayden Nunley
Devanshi Jain @thejainlab.bsky.social · 08/04/2025
For my first science post here, I’m proud to advertise our latest work exploring why germ cell connectivity is really important for meiosis 🐁 Done with some awesome colleagues @florpratto.bsky.social www.nature.com/articles/s41...
nature.com
Intercellular bridges are essential for transposon repression and meiosis in the male germline - Nature Communications
A conserved feature of metazoan meiosis is that it occurs in a syncytium. Here, the authors show that intercellular bridges that connect germ cells in a syncytium are critical for ensuring proper meio...
2319
Reposted by Hayden Nunley
Simons Foundation @simonsfoundation.org · 08/04/2025
ICYMI: #FlatironCCB scientist @henryhmattingly.bsky.social developed the first analytical model for predicting how bacteria spread in obstacle-laden environments. Read more: www.simonsfoundation.org/2025/03/21/n... #science #biology
simonsfoundation.org
New Model Predicts How Bacteria Navigate Obstacles to Spread
A Flatiron Institute scientist has developed the first analytical model for predicting how bacteria spread in environments filled with obstacles.
023
Reposted by Hayden Nunley
Pierre Haas @lepuslapis.bsky.social · 06/03/2025
New #preprint: "A model for boundary-driven tissue morphogenesis" arxiv.org/abs/2503.03688. A great collaboration with @danielalber.bsky.social @zhaoshh.bsky.social, Alexandre Jacinto, Eric Wieschaus, Stas Shvartsman. @flatironinstitute.org @mpipks.bsky.social @mpi-cbg.de @csbdresden.bsky.social
15616
Reposted by Hayden Nunley
Eszter Posfai @eposfai.bsky.social · 05/03/2025
A duo of preprints on the dynamics of the first cell fate decision in mouse by Madeleine Chalifoux (first grad student in the lab!) and Maria Avdeeva (Flatiron). We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
12611
Reposted by Hayden Nunley
Campàs Lab @campaslab.bsky.social · 04/03/2025
How do the different posterior tissues affect the physical elongation of the body axis? Very happy to share the work led by Georgina Stooke-Vaughan, together with Shuo-Ting Yen and Sangwoo Kim, that we recently published in @naturecomms.bsky.social 🥳 ▶️ www.nature.com/articles/s41...
1235
Reposted by Hayden Nunley
Edouard Hannezo @ehannezo.bsky.social · 15/01/2025
Excited to see this out - how single cell heterogeneities and cell-cell interactions synergize to drive tissue patterning during regeneration! See thread below!
0264
Reposted by Hayden Nunley
Jan Funke @janfunkey.bsky.social · 15/01/2025
How can we use machine learning to find subtle patterns in our data and have them visualized? Read the thread below to find out how! Or head to @adjavon.bsky.social's blog post and let Simon the duck walk you through it (like a duck of course): tinyurl.com/yy7csdcd www.biorxiv.org/content/10.1...
biorxiv.org
Quantitative Attributions with Counterfactuals
We address the problem of explaining the decision process of deep neural network classifiers on images, which is of particular importance in biomedical datasets where class-relevant differences are no...
0175
Reposted by Hayden Nunley
Thibaut Brunet @thibautbrunet.bsky.social · 04/01/2025
Some beautiful palintomy for the weekend (in a non-animal, and even a non-holozoan!) #SporangiumSaturday #ProtistsOnSky
2284
Reposted by Hayden Nunley
Joel Marthelot @joelmarthelot.bsky.social · 11/12/2024
Fresh off the press, our work on wing deployment in Drosophila 🪰: www.nature.com/articles/s41... Work by: Simon Hadjaje, Ignacio Andrade-Silva, Marie-Julie Dalbe and Raphaël Clément
815352