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Sandra Hake

@hake-chromatin.bsky.social
813 followers 907 following 26 posts

Professor for Genetics interested in chromatin structure, histone variants and histone modifications and their roles in gene regulation and disease development.

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Reposted by Sandra Hake
The Rockefeller University @rockefeller.edu · 05/10/2026
Rockefeller's C. David Allis revolutionized our understanding of how genes are expressed. His discoveries ushered in the modern era of chromatin biology and epigenetics and laid the foundation for new approaches to treating cancer and other diseases. #125YearsofRockefeller
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Marcus Buschbeck and Lab @marcusbuschbeck.bsky.social · 17/09/2026
OPPORTUNITY TO JOIN US! We are looking for motivated PhD candidate who would like to work on improving blood cancer therapy. This is a mechanistic / translational project. More info and how to apply here: carreraspathfinders.eu
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Sandra Hake @hake-chromatin.bsky.social · 05/09/2026
Welcome back!
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Reposted by Sandra Hake
Justus-Liebig-Universität Gießen (JLU) @jlugiessen.bsky.social · 28/08/2026
Wie ein Zinkfingerprotein Zellteilung und Zelldifferenzierung steuert: Forschungsteam der #JLUGiessen um @hake-chromatin.bsky.social entdeckt überraschende Funktionen des Proteins ZNF512B. www.uni-giessen.de/de/ueber-uns...
Ein Blick durch das Mikroskop zeigt das Zinkfingerprotein ZNF512B während der Teilung (Mitose) einer menschlichen Zelle: Deutlich erkennbar ist die Lokalisierung von ZNF512B an den mitotischen Spindelapparat, der die Chromosomen an die Tochterzellen verteilt.
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Reposted by Sandra Hake
Akis (Argyris) Papantonis @akispapantonis.bsky.social · 25/08/2026
Newest from the lab - and the only of our manuscripts since the introduction of bioRxiv that we did not preprint (it will become obvious why). "Targeting addiction to HMGB2-driven transcriptional programs in pancreatic cancer" A thread...
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Tobias Warnecke @tobiaswarnecke.bsky.social · 22/08/2026
Who needs chromatin anyway...? NOT THIS GUY! www.biorxiv.org/content/10.6... 1/n
biorxiv.org
Chromatin is dispensable for bacterial life
Inside cells, DNA is intimately associated with proteins, forming chromatin. The protein constituents of chromatin vary across the tree of life: histones are the principal building blocks of chromatin...
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Reposted by Sandra Hake
Alejandro Montenegro @aemonten.bsky.social · 21/08/2026
"Four-omics" "we developed a single-cell four-omics sequencing method that enables parallel profiling of genome conformation, histone modifications, chromatin accessibility and gene expression within the same cell (CHARM)" www.nature.com/articles/s41...
nature.com
Gene regulatory landscape dissected by single-cell four-omics sequencing - Nature
Combining single-cell parallel profiling of genome conformation, histone modifications, chromatin accessibility and gene expression reveals dynamics and intranuclear spatial clustering of epigenome pr...
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Sandra Hake @hake-chromatin.bsky.social · 21/08/2026
Finally out in @narjournal.bsky.social! 🎉 ZNF512B not only aggregates chromatin, interacts with the NuRD complex and represses gene expression - it also participates in mitosis progression and plays a crucial role in stem cell differentiation. Have a look! 👇 doi.org/10.1093/nar/...
doi.org
ZNF512B associates with mitotic spindles, regulates metaphase exit, and is crucial for stem cell differentiation
Abstract. Zinc finger proteins are a large family of DNA-binding factors that play key roles in diverse cellular processes, including gene regulation, RNA
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Reposted by Sandra Hake
Irene Cantone @cantoneirene.bsky.social · 22/07/2026
📢 #Postdoc job: I am looking for a #bioinformatician to join my lab for investigating #XchromosomeInactivation and #chromatin-mediated #epigenetic mechanisms underlying #sexbias in #MultipleSclerosis. Please RT
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Reposted by Sandra Hake
Akis (Argyris) Papantonis @akispapantonis.bsky.social · 21/07/2026
Our latest is now out in @nataging.nature.com giving reason to celebrate! Led by talented Spiros Palikyras, it improves our preprint (posted 2 years ago!) dissecting the mechanism and functional consequences of CTCF clustering upon senescence commitment of human cells. www.nature.com/articles/s43...
nature.com
Senescent cells cluster CTCF on nuclear speckles to instruct an alternative splicing program - Nature Aging
Palikyras and colleagues investigate chromatin reorganization upon senescence induction, reporting that components of nuclear speckles coordinate chromatin rewiring and a senescence-associated splicin...
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Reposted by Sandra Hake
The Lewis Lab @peterlewislab.bsky.social · 23/03/2026
New preprint from our lab! An H3.3 knockout does two things at once: it removes H3.3 from chromatin and destabilizes DAXX. We disentangle those functions and find that DAXX-mediated H3.3 deposition can be uncoupled from ERV silencing. www.biorxiv.org/content/10.6...
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David Suter @davidsuter.bsky.social · 09/03/2026
How do the H2A.Z histone variant and its dedicated chromatin remodeller SRCAP regulate gene expression ? Beautiful work from @armelletollenaere.bsky.social now published @ www.nature.com/articles/s41...
nature.com
Mechanisms of gene regulation by SRCAP and H2A.Z - Nature Communications
SRCAP depletion causes rapid replacement of H2A.Z by H2A, leading to upregulation of lineage-specific transcription factors. SRCAP also prevents pioneer transcription factor binding by steric hindranc...
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Gesellschaft für Genetik @gfgenetik.bsky.social · 13/02/2026
On Feb 4, the GfG workshop 'On the Path to a Professorship' brought early-career researchers to Berlin for practical advice on applications and insider tips for the next career step. Thanks to Ann Ehrenhofer-Murray, Sandra Hake, and Reinhard Köster for organizing! Next workshop planned for 2027/28.
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Carmelo Ferrai @carmeloferrai.bsky.social · 18/10/2025
A conserved H3K14ub-driven H3K9me3 for chromatin compartmentalization www.nature.com/articles/s41...
nature.com
A conserved H3K14ub-driven H3K9me3 for chromatin compartmentalization - Nature
G2E3-catalysed H3K14 mono-ubiquitination is crucial for SUV39H compartmentalization and H3K9 trimethylation in pericentromeric heterochromatin, which is essential for proper euchromatin organization a...
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Reposted by Sandra Hake
Bede Portz @ysptsps.bsky.social · 17/10/2025
www.nature.com/articles/s41...
nature.com
Zinc finger domains bind low-complexity domain polymers - Nature Communications
Self-association of low-complexity protein sequences (LC domains) is important for polymer formation, but the mechanisms underlying cell recognition of LC domain polymers remain unclear. Here, authors...
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Sandra Hake @hake-chromatin.bsky.social · 07/10/2025
Extremely proud of my PhD student Lena Paasche, who won the prize for the best short-talk at the @gfgenetik.bsky.social symposium on "Epigenetics & Chromatin"! She is amazing: as scientist and as a wonderful and empathic person!
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Reposted by Sandra Hake
Valentin Flury @flurylab.bsky.social · 28/09/2025
It has been a lot of fun to present our research focus and get to know the @gfgenetik.bsky.social! Thank you so much for having me and organising this great symposium! Looking forward to the next one!
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The Braun Lab @thebraunlab.bsky.social · 27/09/2025
This one feels special: our latest work on subtelomeric heterochromatin is now on www.biorxiv.org/content/10.1.... This story was driven by the virtuoso PhD work of Agnisrota Mazumder @agnisrota.bsky.social, co-mentored with @al-sadylab.bsky.social, and grew out of our #MSCA Cell2Cell network.
biorxiv.org
Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin
Subtelomeres are imperfect repeats adjacent to telomeres that are repressed by heterochromatin. Although essential for genome integrity, their repetitive nature has thwarted dissection of local hetero...
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Reposted by Sandra Hake
Mark Hartmann @mphartmann.bsky.social · 26/09/2025
Pioneers of Epigenetics honored: Davor Solter & Azim Surani receive the 2026 Paul Ehrlich & Ludwig Darmstaedter Prize. Their discovery of genomic imprinting revealed why mammals need both parents—opening the field of epigenetics. #Epigenetics #GenomicImprinting #PaulEhrlichPrize #CanSky #Science
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Reposted by Sandra Hake
Gesellschaft für Genetik @gfgenetik.bsky.social · 26/09/2025
It was an awesome meeting! Fruitful discussion and lots of networking. Thanks to all attendees! More fotos will follow soon.
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Akis (Argyris) Papantonis @akispapantonis.bsky.social · 25/09/2025
Just half a day in and it’s been a blast, with really incredible talks here on Giessen!
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Gesellschaft für Genetik @gfgenetik.bsky.social · 25/09/2025
Amazing 2. day at the GfG ‘Epigenetics & Chromatin’ symposium. Fantastic flash talks, a great first poster session and many memorable talks: among others @erhardtlab.bsky.social, @rodvilla.bsky.social, @thebraunlab.bsky.social, @flurylab.bsky.social, Ehrenhofer-Murray, Liefke, Heun, Imhof & Brehm.
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Gesellschaft für Genetik @gfgenetik.bsky.social · 24/09/2025
What a great first day at the GfG symposium on epigenetics & chromatin. Fantastic talks by @akispapantonis.bsky.social , @apombo1.bsky.social, @marcusbuschbeck.bsky.social and Philipp Korber. And Peter Becker giving the Max-Delbrueck lecture. A real treat for the audience!
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Reposted by Sandra Hake
Juri Kazakevych @juri-epigenomics.bsky.social · 24/09/2025
Looking forward to exciting talks at the GfG Symposium in Gießen. Already found a poster, featuring my favourite gene: SMARCAD1, by Jacqueline Mermoud #epigenomics @diagenode.bsky.social @gfgenetik.bsky.social
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Reposted by Sandra Hake
Tobias Warnecke @tobiaswarnecke.bsky.social · 08/09/2025
Please re-post: Interested in chromatin and its evolution? Good news! There's still time to join us in beautiful Catalonia (9-12 Dec) to discuss eukaryotic, bacterial, archaeal, and viral chromatin and how it all hangs together meetings.embo.org/event/24-evo... Abstract deadline: 30 September
meetings.embo.org
EvoChromo: Evolutionary approaches to research in chromatin
Chromatin is the complex of DNA, RNA and protein that is found making up the chromosomes in eukaryotic cells. Chromatin is essential for proper genome function and is involved in chromosome segregati…
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Reposted by Sandra Hake
dfachinetti.bsky.social @dfachinetti.bsky.social · 04/09/2025
#1 Centromeres are epigenetic loci defined by CENP-A, positioned in unmethylated DNA flanked by highly methylated regions. Our work, published in @natgenet.nature.com in collaboration with @naltemose.bsky.social investigates the role of DNAme at human centromeres www.nature.com/articles/s41...
nature.com
DNA methylation influences human centromere positioning and function - Nature Genetics
Genome-wide and targeted perturbation of DNA methylation at centromeres affects CENP-A positioning and centromere structure, resulting in aneuploidy and reduced cell viability.
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Reposted by Sandra Hake
Kurianlab @kurianlab.bsky.social · 04/09/2025
Useful data set: www.nature.com/articles/s41...
nature.com
Morphological map of under- and overexpression of genes in human cells - Nature Methods
This Resource presents the genetic subset of the 136,000 chemical and genetic perturbations tested by the Joint Undertaking for Morphological Profiling (JUMP) Cell Painting Consortium and associated a...
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Reposted by Sandra Hake
Jack Bateman @jbateman01.bsky.social · 03/09/2025
What makes genes burst www.cell.com/trends/cell-...
cell.com
What makes genes burst
Genes burst. Instead of being monotonously transcribed by a steady stream of RNA polymerases, active genes undergo transient and random pulses of transcription that are referred to as gene bursting. T...
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Reposted by Sandra Hake
Kaia Mattioli @kaiamattioli.bsky.social · 03/09/2025
out today: my labmate Shubham developed a super clever new technique to profile TF-DNA interactions with unprecedented resolution of low-affinity binding sites, revealing patterns in how these sites are organized in the genome to modulate TF occupancy: www.nature.com/articles/s41...
nature.com
Multiple overlapping binding sites determine transcription factor occupancy - Nature
A new method enables comprehensive screening and identification of low-affinity DNA binding sites for transcription factors, and reveals that nucleotides flanking high-affinity binding sites create ov...
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Reposted by Sandra Hake
Rahul K @theresearch.bsky.social · 03/09/2025
nature.com
Rewiring of cortical glucose metabolism fuels human brain cancer growth - Nature
The cortex fuels essential physiological processes with glucose-derived carbon, while gliomas fuel their aggressiveness by rerouting glucose carbon pathways and scavenging alternative carbon sources s...
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Reposted by Sandra Hake
FMI science @fmiscience.bsky.social · 02/09/2025
In a new study, FMI researchers show that two enzymes—KDM2A and KDM2B—act as safeguards in eggs, preventing excessive DNA methylation at gene regions. Without them, abnormal methylation is passed to embryos, repressing genes needed for early development. www.cell.com/developmenta...
cell.com
Preventing CpG hypermethylation in oocytes safeguards mouse development
Kawamura et al. show that H3K36me2 removal by the KDM2A and KDM2B histone demethylases restricts DNMT3A in establishing global DNA methylation in oocytes. Maternal Kdm2a/Kdm2b knockout embryos die dur...
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Reposted by Sandra Hake
Sean Flynn @seanflynn.bsky.social · 02/09/2025
Please share! PhD projects available through @gw4biomeddtp.bsky.social Please get in touch if you are interested in studying chromatin biology in stem cell models gw4biomed.ac.uk/architects-o... gw4biomed.ac.uk/risk-vs-prot... gw4biomed.ac.uk/rna-dependen... gw4biomed.ac.uk/investigatin...
gw4biomed.ac.uk
Architects of the Genome: Using genomic technologies to elucidate the role of CTCF in neurodevelopmental disorders - GW4 BioMed MRC DTP
Project Code MRCNMH26Ex Flynn Project Type The project is primarily wet-lab based, with a dry-lab component in Years 2 and 3. Research Theme Neuroscience and Mental Health Project Summary Download Sum...
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FragileNucleosome @fnucleosome.bsky.social · 01/09/2025
We're super excited to announce the entire lineup for the Fall season of Fragile Nucleosome Seminars, starting on Sept 10th at 1200 EDT / 1600 UTC with @gracebower.bsky.social and @creminslab.bsky.social! register here for the entire series: us06web.zoom.us/webinar/regi...
Fragile Nucleosome Fall Seminars:
September 10    Grace Bower, Kvon Lab @ UC Irvine, USA
    Jennifer Phillips-Cremins, UPenn, USA

September 24    Ali Wilkening, Sanulli Lab @ Stanford, USA
    Juanma Schvartzman, Columbia University, USA

October 8    Sanim Rahman, Greenberg Lab @ UPenn, USA
    Alex Federation, Talus Bio, USA

October 22    Alice Laigle, Croll Lab @ University of Neuchâtel, Switzerland
    Seungsoo Kim, UC Irvine, USA

November 5    Hannah Long, University of Edinburgh, UK
    Jeff Vierstra, Altius Institute, USA

November 19    Ishtiaque Hossain, Pastor Lab @ McGill, Canada
    Sarah Teichmann, University of Cambridge, UK

December 3    María Mariner Faulí, Rada Iglesias Lab @ IBBTEC, Spain
    Jonathan Henninger, Carnegie Mellon, USA

December 17    Rebecca Berrens, Oxford University, UK
    Jean-Benoit Lalanne, University of Montreal, Canada
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Tobias Warnecke @tobiaswarnecke.bsky.social · 01/09/2025
Please re-post: If you know (or are!) somebody who might fancy doing a PhD (Oct 2026 start) in my group @oxfordbiochemistry.bsky.social, working on chromatin evolution in prokaryotes (or other things we're interested in), please have a look at www.bioch.ox.ac.uk/supervisors-...
bioch.ox.ac.uk
Supervisors and Projects
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Graham Dellaire @docdellaire.bsky.social · 01/09/2025
Two new druggable targets in ERG-driven prostate cancer - KMT2A and DOT1L www.nature.com/articles/s41...
nature.com
ERG-driven prostate cancer initiation is cell-context dependent and requires KMT2A and DOT1L - Nature Genetics
Lineage tracing in mice identifies a subpopulation of basal cells that express Tmprss2 and Nkx3 as the origin of ERG-driven prostate cancer. Upon expansion, these cells show an enrichment for STAT3 ch...
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Mathieu Lupien @matlupien.bsky.social · 29/08/2025
Every so often, a paper lands at exactly the right moment. This one’s a gem. Can’t wait to try out this new strategy for delivering CRISPRoff chromatin-editing tools into our favorite cellular model system. Congrats to James K Nuñez and his team: www.nature.com/articles/s41...
nature.com
Programmable epigenome editing by transient delivery of CRISPR epigenome editor ribonucleoproteins - Nature Communications
Epigenome editing programs gene silencing without inducing DNA breaks but challenges in delivery into human cells limit its broader use. Here, the authors present the RENDER platform, which uses virus...
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Shiori Iida @shiori-iida.bsky.social · 29/08/2025
One more movie! Using the RL algorithm (from pnas.org/doi/10.1073/...), @masaashimazoe.bsky.social analyzed our nucleosome tracking data and classified them by their mobility. Hotter color = faster motion (Slow🔵→ 🟢 → 🟡 → 🟠 Fast)
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Alexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 28/08/2025
If you like transcription regulation and its mechanisms, this WIP list is for you. I'm sure I've forgotten lots of people, so don't hesitate to let me know so I can add you to the list. go.bsky.app/8vTgeXB
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Sandra Hake @hake-chromatin.bsky.social · 25/08/2025
Excited to share our newest results on ZNF512B: It not only regulates chromatin organization, binds NuRD and H2A.Z, and acts as transcriptional repressor (Wunderlich et al., NAR, 2024), it also participates in mitosis and is crucial for stem cell differentiation. www.biorxiv.org/content/10.1...
biorxiv.org
ZNF512B associates with mitotic spindles, regulates metaphase exit and is crucial for stem cell differentiation
Zinc finger proteins are a large family of DNA-binding factors that play key roles in diverse cellular processes including gene regulation, RNA metabolism and cell cycle control. The zinc finger prote...
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Reposted by Sandra Hake
Marco Trizzino @marcotrizzino.bsky.social · 20/08/2025
This preprint is now a published peer-reviewed paper! Thanks to all the co-authors involved, to the funders and to @reviewcommons.org and @embopress.org @emboreports.org for a smooth editorial process! Excited to see this in press! www.embopress.org/doi/full/10.... @imperiallifesci.bsky.social
embopress.org
The NuRD component CHD3 promotes BMP signalling during cranial neural crest cell specification | EMBO reports
imageimageLoss of the chromatin remodeller CHD3 results in a loss of accessibility at cis-regulatory sites targeted by BMP-responsive transcription factors during cranial neural crest cell specificati...
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Sandra Hake @hake-chromatin.bsky.social · 19/08/2025
Congratulations, Dr. Kalita!!!
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Sandra Hake @hake-chromatin.bsky.social · 16/07/2025
Join us!!!!! THE Symposium for all Chromatin and Epigenetics experts and 'lovers' this year!!!
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Gesellschaft für Genetik @gfgenetik.bsky.social · 27/06/2025
Deadline approaching fast (June 30th, 2025)! Do not miss this fantastic opportunity: prestigious 3.000 € award for best PhD thesis!
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The Lewis Lab @peterlewislab.bsky.social · 16/06/2025
It was a privilege to be part of the Allis lab. Dave fostered an environment of rigor, curiosity, and kindness- his impact lives on in the many he mentored. Grateful to reconnect at Rockefeller with this extraordinary group. Thank you to the organizers for an inspiring symposium.
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Sandra Hake @hake-chromatin.bsky.social · 12/06/2025
Elisabeth-Gateff Award Alert! Great opportunity for all German PhDs or PhDs, who worked on their thesis in Germany: 3.000 € award for best thesis in the area of genetics/epigenetics/molecular biology! Apply till June 30th, 2025! Please RT!
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Sandra Hake @hake-chromatin.bsky.social · 23/05/2025
What a fantastic achievement! @jlugiessen.bsky.social got three excellence clusters! Many congratulations to all organisers! Extremely happy about the continued success of @cpi-exstra.bsky.social. I am overjoyed to be a – small - part of this cluster with its amazing team of researchers!
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Sandra Hake @hake-chromatin.bsky.social · 23/04/2025
Join us!!!
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Sandra Hake @hake-chromatin.bsky.social · 08/04/2025
As organizer, I can highly recommend this Symposium! Come and join us! Please RT!
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CRC 1064 Chromatin Dynamics @crc1064.bsky.social · 25/03/2025
#ChromatinDays – Join Us! SFB 1064's final annual meeting! Talks, reunion & BBQ Bash 🍖 on May 26-27. Guest speakers: former SFB & IRTG members. Alumni, don’t miss the BBQ & IRTG Satellite Session! 📢 Register now! Scan the QR code or visit: www.sfb1064.med.uni-muenchen.de/chromatin-da... 🐝 there!
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The Groth lab @grothlab.bsky.social · 06/03/2025
𝐍𝐞𝐰 𝐦𝐞𝐜𝐡𝐚𝐧𝐢𝐬𝐭𝐢𝐜 𝐢𝐧𝐬𝐢𝐠𝐡𝐭𝐬 𝐢𝐧𝐭𝐨 𝐭𝐡𝐞 𝐫𝐞𝐠𝐮𝐥𝐚𝐭𝐢𝐨𝐧 𝐨𝐟 𝐡𝐢𝐬𝐭𝐨𝐧𝐞 𝐬𝐮𝐩𝐩𝐥𝐲! Excited to share our latest collaboration led by tkjeong.bsky.social and ciaranfrater.bsky.social! Structural determination of the histone chaperone ASF1 and its regulator CODANIN-1 uncovers how CODANIN-1 counters ASF1 activity. 🧵👇
rdcu.be
CODANIN-1 sequesters ASF1 by using a histone H3 mimic helix to regulate the histone supply
Nature Communications - CODANIN-1 negatively regulates the function of ASF1, the key chaperone for histone H3-H4 supply. Here the authors present the cryo-EM structure of the CODANIN-1_ASF1A...
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