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Christine Mayr

@christinemayr.bsky.social
943 followers 474 following 12 posts

Scientist interested in 3’UTRs and mRNA-based translation environments. We study how mRNAs regulate IDR conformations and protein functions. MSKCC in NYC

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Christine Mayr @christinemayr.bsky.social · 28/07/2026
Jim Shorter and his postdoc Miriam wrote a beautiful preview about our most recent paper on mRNAs preventing misfolding of IDR-containing proteins. UTR-ly unexpected: RNA chaperones tame intrinsically disordered proteins: Cell www.cell.com/cell/fulltex...
cell.com
UTR-ly unexpected: RNA chaperones tame intrinsically disordered proteins
How do cells ensure that complex, multidomain proteins fold correctly? Luo et al. reveal a self-contained solution. The 3′UTR of an mRNA co-translationally chaperones the protein it encodes, preventin...
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Digital Brain @yourdigitalbrain.bsky.social · 25/07/2026
She fed a wild squirrel every day for months. Then it climbed down and offered her a treat back.
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Alexey Amunts @amunts.bsky.social · 04/07/2026
RNA can build. A short RNA self-assembles into a 60-subunit icosahedral cage like a viral capsid, but made entirely of RNA. The striking preprint also reveals a 57-nt RNA filament at ~2.7 Å. Congratulations, Lin Huang and colleagues! www.biorxiv.org/content/10.6...
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Memorial Sloan Kettering Cancer Center @mskcancercenter.bsky.social · 16/06/2026
MSK scientists have uncovered a hidden role for RNA. Researchers led by MSK molecular and cell biologist @christinemayr.bsky.social found that RNA can act as a critical regulatory proteins, revealing a previously unknown function of RNA. Learn more: bit.ly/3QpBprx
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Christine Mayr @christinemayr.bsky.social · 08/06/2026
Finally out in @Cellcellpress! Proteins with long IDRs are prone to misfolding during protein synthesis. This is prevented by mRNA 3′UTRs that act as mRNA-based IDR chaperones. www.cell.com/cell/fulltex...
cell.com
mRNA 3′ UTRs chaperone intrinsically disordered regions to control protein activity
Highly conserved mRNA 3′ UTRs act as co-translational chaperones for intrinsically disordered regions (IDRs), preventing inter-domain misfolding and enabling biogenesis of fully active proteins.
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Junjie Guo @junjieguo.bsky.social · 08/05/2026
Check out the phenomenal PhD work by Katie Copley, a current postdoc in our lab @yaleneuro.bsky.social @yalerna.bsky.social. www.science.org/doi/10.1126/...
science.org
Short RNA chaperones promote aggregation-resistant TDP-43 conformers to mitigate neurodegeneration
Aberrant aggregation of the prion-like RNA binding protein TDP-43 drives several fatal neurodegenerative proteinopathies, including amyotrophic lateral sclerosis (ALS). In this work, we define how sho...
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Christine Mayr @christinemayr.bsky.social · 08/05/2026
If you want to know what 3′UTRs with long conserved sequence stretches do, check out our BioRxiv preprint doi.org/10.64898/202.... They form functional intermolecular 3′UTR-3′UTR interactions that enable co-folding of proteins to rapidly induce transcriptional programs.
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Lori Passmore @lapassmore.bsky.social · 27/04/2026
Very importantly, one of the co-organisers @xrnchew.bsky.social is cycling to the meeting to raise awareness and funds for 'All things small and green' . Please join him or sponsor him! gofund.me/f4068dc3c
gofund.me
Donate to Cycling from Exeter to the 3' end (in Oxford)!, organized by Steven West
I'll be cycling from Exeter to Oxford (about 160 miles/260 km) - hopefully … Steven West needs your support for Cycling from Exeter to the 3' end (in Oxford)!
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Christine Mayr @christinemayr.bsky.social · 27/04/2026
If you are interested in mechanistic aspects of transcription regulation and mRNA processing, check out this fantastic EMBO Workshop in Oxford, UK in September 2026. Registration is closing soon!
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Miha Modic @paraspeckle.bsky.social · 02/06/2025
New method drop: HCR-Proxy, a modular proximity labelling approach to profile local proteome composition around RNA at nanoscale, subcompartmental resolution. Thereby we resolved nested nucleolar layers and uncovered the grammar of spatial protein partitioning. www.biorxiv.org/content/10.1...
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Ardem Patapoutian @ardemp.bskyverified.social · 10/07/2025
This is insane! "'Positive review only': Researchers hide AI prompts in papers" asia.nikkei.com/Business/Tec... h/t Ryan Pack
asia.nikkei.com
'Positive review only': Researchers hide AI prompts in papers
Instructions in preprints from 14 universities highlight controversy on AI in peer review
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UCSC Genome Browser @genomebrowser.bsky.social · 07/07/2025
We turn 25 today! July 7th marks the 25th anniversary of the human genome going online and the start of the UCSC Genome Browser. Then vs. now, we have 165k monthly visitors, and our codebase is over three million lines of code. See our news for more: bit.ly/genomeBrowser...
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Javier Irazoqui @javierira.bsky.social · 08/07/2025
apple.news/A6s0jhagcSLy...
apple.news
Franklin Stahl, biologist who helped reveal how DNA replicates, dies at 95 — The Washington Post
An early experiment, with colleague Matthew Meselson, helped set the stage for a revolution in genetics.
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Christine Mayr @christinemayr.bsky.social · 07/07/2025
New paper: More than 2700 human 3′UTRs are highly conserved. These 3′UTRs are essential components in mRNA templates, as their deletion decreases protein activity without changing protein abundance. Highly conserved 3′UTRs help the folding of proteins with long IDRs. www.biorxiv.org/content/10.1...
biorxiv.org
mRNA 3′UTRs chaperone intrinsically disordered regions to control protein activity
More than 2,700 human mRNA 3′UTRs have hundreds of highly conserved (HC) nucleotides, but their biological roles are unclear. Here, we show that mRNAs with HC 3′UTRs mostly encode proteins with long intrinsically disordered regions (IDRs), including MYC, UTX, and JMJD3. These proteins are only fully active when translated from mRNA templates that include their 3′UTRs, raising the possibility of functional interactions between 3′UTRs and IDRs. Rather than affecting protein abundance or localization, we find that HC 3′UTRs control transcriptional or histone demethylase activity through co-translationally determined protein oligomerization states that are kinetically stable. 3′UTR-dependent changes in protein folding require mRNA-IDR interactions, suggesting that mRNAs act as IDR chaperones. These mRNAs are multivalent, a biophysical RNA feature that enables their translation in network-like condensates, which provide favorable folding environments for proteins with long IDRs. These data indicate that the coding sequence is insufficient for the biogenesis of biologically active conformations of IDR-containing proteins and that RNA can catalyze protein folding. ### Competing Interest Statement The authors have declared no competing interest. Pershing Square Foundation, https://ror.org/04tce9s05 G. Harold & Leila Y. Mathers Foundation National Institutes of Health, DP1GM123454, R35GM144046 Memorial Sloan Kettering Cancer Center, https://ror.org/02yrq0923, P30 CA008748
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Christine Mayr @christinemayr.bsky.social · 24/06/2025
Scientists use bacteria to turn plastic waste into paracetamol www.theguardian.com/science/2025...
theguardian.com
Scientists use bacteria to turn plastic waste into paracetamol
Genetically modified E coli used to create painkillers from material produced from plastic bottles
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Christine Mayr @christinemayr.bsky.social · 24/06/2025
Scientists use bacteria to turn plastic waste into paracetamol
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brangwynnelab.bsky.social @brangwynnelab.bsky.social · 21/04/2025
What drives cytoplasmic mRNA organization? We created unbiased, genome-wide maps of mesoscale RNA-RNA spatial proximity, revealing impact of encoded protein function. Fantastic work from @lindsayabecker.bsky.social @sofiquinodoz.bsky.social @davidaknowles.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Genome-wide mapping of mesoscale neuronal RNA organization and condensation
Subcellular RNA organization can affect critical cellular functions. However, our understanding of RNA microenvironments, particularly biomolecular condensates, remains limited, largely due to a lack ...
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Michael Kearse @michaelkearse.bsky.social · 12/04/2025
New pre-print from the lab with some great collaborators. Julia worked so hard!
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Nicoletta Petridou @nicolettapetridou.bsky.social · 27/03/2025
Are material phase transitions more than simple regulators of tissue deformability? Check our latest work uncovering that rigidity transitions can trigger cell polarity! Congratulations to @laura-rustarazo.bsky.social , @crisp-c.bsky.social and Adrián for leading this work!
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Ryan Flynn @raflynn5.bsky.social · 26/03/2025
A nearly 9 year effort to design and implement new CLIP-based technologies to define multimeric protein assemblies on RNA. Enables ‘watching’ of RNP assemblies inside living cells Special congrats to Luca Ducoli, Brian Zarnegar, and Paul Khavari @nature.com www.nature.com/articles/s41...
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Kaia Mattioli @kaiamattioli.bsky.social · 26/03/2025
our work on the molecular differences between transcription factor isoforms is out now in Molecular Cell! key point: 2/3rds of TF isos differ in properties like DNA binding & transcriptional activity many are "negative regulators" & misexpressed in cancer www.sciencedirect.com/science/arti...
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Leo Schärfen @leoschaerfen.bsky.social · 26/03/2025
Here is our paper showing in vivo folding of nascent RNA right after synthesis, published now in @cp-molcell.bsky.social! With @karlaneugebauer.bsky.social, @isaac-vock.bsky.social, @mattdsimon.bsky.social www.cell.com/molecular-ce...
cell.com
Rapid folding of nascent RNA regulates eukaryotic RNA biogenesis
Schärfen et al. develop a method to measure the structure of nascent RNAs during their synthesis by RNA polymerases. Base pairing occurs rapidly in cells, revealing the strong regulatory potential of ...
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Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 22/03/2025
Why AI won’t replace scientists capable of making disruptive conceptual breakthroughs - they pose questions that challenge, rather than align with, the training data set thomwolf.io/blog/scienti...
thomwolf.io
🔭 The Einstein AI model
I shared a controversial take the other day at an event and I decided to write it down in a longer format: I’m afraid AI won't give us a compressed 21st century.
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Saarikangas lab @saarikangaslab.bsky.social · 19/03/2025
Apply now for the Susan Lindquist School on Proteostasis EMBO-FEBS Lecture Course, 16-19 Sept 2025 in Espoo, Finland! Top speakers cover the latest in proteostasis. Open to 60 PhDs & postdocs. Deadline: 15 June 2025. meetings.embo.org/event/25-pro...
meetings.embo.org
Susan Lindquist School on Proteostasis
Cells constantly surveil and monitor their proteome to ensure proper function. These processes, spanning multiple steps from protein synthesis to folding and degradation, are collectively known as pr…
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Wolfgang Huber @wkhuber.bsky.social · 19/03/2025
Interested in doing a sabbatical at EMBL, at one of its 6 sites in Barcelona, Cambridge, Grenoble, Hamburg, Heidelberg or Rome? Funding call with deadline 15 June, decisions in July. www.embl.org/about/info/s...
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Nott Lab @nottlab.bsky.social · 17/03/2025
New paper out! Why do condensates prefer some surfaces and not others? Check it out here: doi.org/10.1063/5.02...
doi.org
Intrinsic hydrophobicity of IDP-based biomolecular condensates drives their partial drying on membrane surfaces
The localization of biomolecular condensates to intracellular membrane surfaces has emerged as an important feature of sub-cellular organization. In this work,
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🌈Dr. Frizzle @swilua.bsky.social · 17/03/2025
I’m crying, this is so funny WEAPONIZED MANSPLAINING FOR ESPIONAGE ☠️☠️
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Luke Timmerman @luketimmerman.bsky.social · 12/03/2025
NIH cuts are hitting young scientists the hardest. By David Baker. timmermanreport.com/2025/03/davi...
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Raywat Deonandan 🍁🇨🇦 @deonandan.bsky.social · 03/03/2025
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Hilgers Lab @hilgerslab.bsky.social · 26/02/2025
Fantastic @embo.org lecture course in Pune, India! Lots of cool science, great interactions and condensation (pun intended) with RNA enthusiasts from all over the world. With Rick @rickmarsman.bsky.social and Sakshi @sakshigorey.bsky.social presenting posters. #EMBOrnaProtein #RNA
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Eric Topol @erictopol.bsky.social · 18/02/2025
Visualizing RNA in live cells using CRISPR nature.com/articles/s41...
nature.com
Single-molecule live-cell RNA imaging with CRISPR–Csm - Nature Biotechnology
Single-molecule live-cell fluorescence in situ hybridization uses an RNA-targeting CRISPR–Csm complex to image and track endogenous RNAs.
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Ardem Patapoutian @ardemp.bskyverified.social · 10/02/2025
Petition to Reverse the NIH Indirect Cost Cap initiated by Tom Maniatis. Please amplify Sign the Petition: chng.it/kK2HMP5pGk "Share with Leadership & Faculty. Reach out to professional societies, biotech and pharma leaders, and philanthropic organizations to raise awareness and mobilize support."
chng.it
Sign the Petition
Petition to Reverse the NIH Indirect Cost Cap (NOT-OD-25-068)
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David Kuster @rnadavid.bsky.social · 31/01/2025
G3BP1 ribonucleoprotein complexes regulate focal adhesion protein mobility and cell migration: Cell Reports www.cell.com/cell-reports... Amazing work by Liana Boraas, Mengwei Hu, ..., @christinemayr.bsky.social, Siyuan Wang, @nicolilab.bsky.social.
cell.com
G3BP1 ribonucleoprotein complexes regulate focal adhesion protein mobility and cell migration
Boraas et al. identify that mRNAs and the stress granule RNA-binding protein G3BP1 form ribonucleoprotein (RNP) complexes at FAs. These RNPs regulate FA protein mobility and cell migration under norma...
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Keren Lasker @kerenlasker.bsky.social · 30/12/2024
1/ 🚨We’re thrilled to share our latest study: "Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure" 🌟 www.biorxiv.org/content/10.1... How do biomolecular condensates achieve their cellular roles? It comes down to their internal structure. 🧵⬇️
biorxiv.org
Cellular Function of a Biomolecular Condensate Is Determined by Its Ultrastructure
Biomolecular condensates play key roles in the spatiotemporal regulation of cellular processes. Yet, the relationship between atomic features and condensate function remains poorly understood. We stud...
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Bede Portz @ysptsps.bsky.social · 21/12/2024
www.nature.com/articles/s41...
nature.com
The conformational space of RNase P RNA in solution - Nature
Using a deep neural network and statistical analyses of atomic force microscopy images of individual RNA molecules enables the mapping of RNA conformational space in solution.
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Cell Chemical Biology @cp-cellchembiol.bsky.social · 20/12/2024
Check out the latest Reviews and Perspectives from experts in RNA biology in this joint collection from @CellChemBiol and @MolecularCell dlvr.it/TGwFkr
dlvr.it
Molecular mechanisms in RNA biology: Cell Press
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Arjun Raj @arjunraj.bsky.social · 20/12/2024
Insightful thread by @erikvannimwegen.bsky.social arguing for nudges in the publishing system instead of blowing it up. What I find curious is how our truly vast publishing ecosystem is stubbornly resistant to any *experimentation*. eLife tries a couple things and gets vilified. What the heck! 1/2
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Nikolai Slavov @slavov-n.bsky.social · 27/11/2024
DNA copy number variation is strongly buffered at the protein level. The buffering is much stronger than at the RNA level.
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Eric Fauman (he/him) @ericfauman.bsky.social · 25/11/2024
Beats closest gene! @jengreitz.bsky.social @anshulkundaje.bsky.social And others that I can't find on bluesky. But if you're here let me know so I can follow you!
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Eugene Valkov @eugenevalkov.bsky.social · 25/11/2024
#RNAsky #RNAbiology
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Alexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 21/11/2024
Until 1966, women employees of the Australian Public Service had their permanent positions revoked upon marriage 😱 #womeninscience #womeninSTEM
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Alexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 20/11/2024
Interesting paper that explores the use of AlphaFold-Multimer in predicting Intrinsically disordered protein regions-protein complexes using in particular distogram data (minD) #alphafold #IDPs paging @jessicaandreani.bsky.social @raphguerois.bsky.social www.pnas.org/doi/10.1073/...
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Josh Tycko @joshtycko.com · 18/11/2024
New here and excited to share our new paper on transcriptional effectors! Interested to discuss context-specificity of gene regulation? Or how to get CRISPRi/a working in new contexts? 👋 www.nature.com/articles/s41...
nature.com
Development of compact transcriptional effectors using high-throughput measurements in diverse contexts - Nature Biotechnology
Improved effectors for CRISPRi/CRISPRa are developed following high-throughput screening of transcriptional domains.
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John Prensner @johnprensner.bsky.social · 14/11/2024
Wouldn't it be lovely to live in a world where we knew what every single amino acid change would do to patient response to therapy? We are getting there with these two exciting prime editing studies! #CanSky #MEDsky 💻🧬 www.nature.com/articles/s41... www.nature.com/articles/s41...
nature.com
Saturation profiling of drug-resistant genetic variants using prime editing - Nature Biotechnology
PEER-seq characterizes the drug resistance profiles of thousands of genetic variants.
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Di Jiang @dijiang319.bsky.social · 14/11/2024
This week #ScienceMagazine Ribozyme-activated mRNA trans-ligation enables large gene delivery to treat muscular dystrophies #URochesterResearch @urochester.bsky.social www.science.org/doi/10.1126/...
science.org
Ribozyme-activated mRNA trans-ligation enables large gene delivery to treat muscular dystrophies
Ribozymes are small catalytic RNA sequences capable of nucleotide-specific self-cleavage found widespread in nature. Ribozyme cleavage generates distinct 2′,3′-phosphate and 5′-hydroxyl termini that r...
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Allison Didychuk @didychuk.bsky.social · 14/11/2024
welcome new friends - come be my irl friend? there's still a few days left to apply for our open rank search for a colleague doing innovative biophysics/biochemistry in cells! 🧑‍🔬 Yale Molecular Biophysics & Biochemistry Department - deadline Nov. 15 - apply.interfolio.com/151559
apply.interfolio.com
Apply - Interfolio {{$ctrl.$state.data.pageTitle}} - Apply - Interfolio
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DjuranovicLab at Brown University RNA Center @djuranoviclab.bsky.social · 13/11/2024
@djuranoviclab.bsky.social will be Djuranovic lab at Brown University and newly formed RNA Center from July 1st 2025. Postdoc as well as staff scientist positions will be available. www.brown.edu/news/2024-02...
brown.edu
Changing the future of medicine: How Brown is becoming a global hub for RNA research
The ambitious goal of the new Brown RNA Center is to untangle the mysteries of human RNA, which could be instrumental in preventing and developing treatments for a wide variety of complex diseases.
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Brian Carrick @bcarrick.bsky.social · 26/10/2024
I’m excited to share this story. We found that mutating an RNA binding protein’s ability to bind RNA did not remove all biological function, but when combined with a mutation that affects protein interactions, the RBP no longer functioned. www.biorxiv.org/content/10.1...
biorxiv.org
The PUF RNA-binding protein, FBF-2, maintains stem cells without binding to RNA
Like all canonical PUF proteins, C. elegans FBF-2 binds to specific RNAs via tripartite recognition motifs (TRMs). Here we report that an FBF-2 mutant protein that cannot bind to RNA, is nonetheless b...
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Eugene Valkov @eugenevalkov.bsky.social · 13/11/2024
#RNASky #RNAbiology
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Matthias Soller @matthiassoller.bsky.social · 13/11/2024
Excited to share our new paper describing how ELAV/Hu RNA binding proteins achieve binding specificity now in NAR thanks to fantastic @davidmcquarrie.bsky.social academic.oup.com/nar/article/...
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