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Eugene Valkov

@eugenevalkov.bsky.social
3.1K followers 2.8K following 766 posts

mRNA regulation & decay | biochemistry | structural biology | molecular biology | cancer All views are personal. Google Scholar: tinyurl.com/EuValScholar ORCID: 0000-0002-3721-1739

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Eugene Valkov @eugenevalkov.bsky.social · 12/09/2026
Without saying your age, what is your favorite movie that came out when you were 20 years old?
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Gandalf's Iconic 'Fly, You Fools!' Line
ALT: Gandalf's Iconic 'Fly, You Fools!' Line
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Max-Planck-Gesellschaft @maxplanck.de · 09/09/2026
We are hiring! Start at a #MaxPlanckInstitute with your own independent Max Planck Research Group. This position is equivalent to a W2 Professorship at a German university, or Associate Professor internationally. 🔗Apply until October 14th! www.mpg.de/career/max-p... #ScienceCareer #MPRG #TenureTrack
Call for independent Max Planck Research Groups
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Sebastian Falk @sebastianfalk.bsky.social · 08/09/2026
Proud to see this preprint from @virginiabusetto.bsky.social out today — she's uncovered how a pseudohelicase-centered complex couples RNA cleavage to poly(UG)ylation. Beautiful mechanistic work from the lab, go check out the thread! 🧵
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Drummond Lab @drummondlab.bsky.social · 08/09/2026
We are hiring! 🌟 Dept of Biochemistry and Molecular Biology at the University of Chicago is searching for a tenure-track assistant professor. It's a broad search: we want great colleagues doing serious biological work at the molecular scale. Join us! apply.interfolio.com/191981 bcmb.uchicago.edu
A picture of the University of Chicago campus, with downtown Chicago in the distance and Lake Michigan on the horizon. The campus's central quad is pictured, a classical collegiate quad with paths and old trees and stone architecture. It's really pretty and I love it.
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The Royal Society @royalsociety.org · 28/08/2026
The Francis Crick Medal and Lecture 2027 is awarded to Dr Thi Hoang Duong (Kelly) Nguyen for her ground-breaking discoveries into the molecular mechanisms of telomere maintenance. #RSMedals royalsociety.org/medals-and-prizes/…
A woman in a blue top with a small colourful pattern smiles at the camera in front of a white background.
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Eugene Valkov @eugenevalkov.bsky.social · 27/08/2026
What would happen if we stopped spending $3.7B on APCs? Where could all that money go instead? 🤔
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Eugene Valkov @eugenevalkov.bsky.social · 27/08/2026
UCSF is recruiting. Top notch science environment in an amazing location
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Eugene Valkov @eugenevalkov.bsky.social · 27/08/2026
I thought initially this was the first evidence of minions in Ancient Greece
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Sebastian Baumgarten @sebbaumgarten.bsky.social · 19/08/2026
The singular job of all known ribosomes: synthesizing protein. Enter the malaria parasite. In our new work, we show that Plasmodium evolved an entire new kind that does just the opposite - inhibit mRNA translation. www.biorxiv.org/content/10.6...
biorxiv.org
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Drew Scanlon @drewscanlon.bsky.social · 24/08/2026
Hi Internet! I'm Drew and THIS IS MY FACE. If this GIF has ever brought you joy in the past, I humbly ask you to consider making a donation to the National MS Society. It would mean a lot to me and to those I know affected by the disease! Donate at blinkingguy.com
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Eugene Valkov @eugenevalkov.bsky.social · 24/08/2026
Make a band bigger: Garbage → Landfill
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Admirable Women @admirablewomen.bsky.social · 23/08/2026
Biochemist Florence Seibert developed the Purified Protein Derivative (PPD) in the 1930s. Before her work, TB skin tests were inconsistent & unreliable. Her PPD formula was adopted as the international standard (1952) & remains in use for TB testing today. Died #OTD in 1991. #WomenInSTEM
Vintage black-and-white studio portrait of American biochemist Florence Barbara Seibert (1897–1991), shown from the shoulders up. The young woman has short, dark, wavy 1920s-style hair parted on the side, wears round wire-rimmed eyeglasses, and offers a gentle smile toward the camera. She is dressed in a light-colored blouse with a ruffled collar. A studio imprint reading “A. F. R. S. Chicago” appears in the lower right corner.
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Eugene Valkov @eugenevalkov.bsky.social · 24/08/2026
Exposure to skilled trades in elementary school is fine. Most adults don’t know how to wire a plug. Germany runs a teacher recommendation at 10yo that steers toward university or away from it. Most German states have since scrapped or merged the bottom track because it sorted by class, not aptitude.
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Matt Higgins @parasitematt.bsky.social · 20/08/2026
How do African trypanosomes regulate the complement system? Check out our new study from @BiochemCook, in which he identified a new trypanosome receptor which binds to the core C3bBb convertase of the complement system and blocks its activity. Real all about it! doi.org/10.64898/202...
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Eugene Valkov @eugenevalkov.bsky.social · 17/08/2026
NIH Intramural Research Program is hiring via the Stadtman program. Prospective candidates should feel free to reach out to me, and I will be happy to share my experience both as an applicant and a panel member- we are looking for great new colleagues! irp.nih.gov/careers/nih-...
irp.nih.gov
Stadtman Tenure-Track Investigators | NIH Intramural Research Program
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David McQuarrie @davidmcquarrie.bsky.social · 01/08/2026
A multivalent RNA affinity tag enables selective purification of tagged RNAs and bound proteins doi.org/10.1093/nar/...
doi.org
A multivalent RNA affinity tag enables selective purification of tagged RNAs and bound proteins
Abstract. Efficient purification of specific RNAs from lysates remains a major challenge. Existing methods, such as MS2 tagging or oligonucleotide hybridiz
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Matthew Cobb @matthewcobb.bsky.social · 29/07/2026
It's my thesis that the Habsburg/Hapsburg lip/jaw was noticed as a family trait only in the mid-C19 (so sez ngram viewer), but I can't find any decent historiography of the issue, despite it being so notorious. There's loads of medical speculation, but that's not what I'm after. Any ideas? Pls RT
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Eugene Valkov @eugenevalkov.bsky.social · 28/07/2026
I found little to disagree with in this assessment of the film. An Uncomplicated Man www.lrb.co.uk/the-paper/v4...
lrb.co.uk
Emily Wilson · An Uncomplicated Man
As they say at the awards shows, I was humbled to learn that Christopher Nolan has read at least the first line of my...
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Deva Woodly @devawo.bsky.social · 25/07/2026
Love it when professors stumble into notoriety by doing nothing but their work.
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@JohnGrossSF @johngrosssf.bsky.social · 24/07/2026
Strain-specific epistasis shapes fitness landscapes of APOBEC3G antagonism by HIV-1 Vif proteins | Science Advances www.science.org/doi/10.1126/... Congratulations on this beautiful work!
science.org
Strain-specific epistasis shapes fitness landscapes of APOBEC3G antagonism by HIV-1 Vif proteins
Unexpected flexibility and evolutionary constraints shape how HIV-1 overcomes a key human antiviral protein.
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Quaid Morris @quaidmorris.bsky.social · 21/07/2026
Can we predict which T cells recognize which peptides? A lot of the signal is hiding in AlphaFold3's (AF3's) hallucinations. enFoldX: instead of one predicted structure, we use the whole noisy ensemble to predict TCR:pMHC binding. www.biorxiv.org/content/10.6... 💻 🧬 github.com/jonlevi/enFoldX
biorxiv.org
Ensembles of in silico structures enable T cell peptide-MHC binding prediction
Adaptive immunity relies on T-cell receptor (TCR) recognition of peptides presented by the major histocompatibility complex (pMHC). Accurate prediction of TCR:pMHC binding pairs from sequence data rem...
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Eugene Valkov @eugenevalkov.bsky.social · 19/07/2026
Football wins! Well done Spain!
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Eugene Valkov @eugenevalkov.bsky.social · 19/07/2026
Whenever I go to a kid 🎭 production and read among all the kid bios “I thank baby J for dying for my sins”, I’m like 😳 for the rest of the performance
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Loukas Theodosiou @bioinformatician.bsky.social · 19/07/2026
After four years, several updates and a handful of CRAN releases, 𝗹𝘁𝗰 𝗰𝗼𝗹𝗼𝗿 𝗽𝗮𝗹𝗲𝘁𝘁𝗲 𝗥-𝗽𝗮𝗰𝗸𝗮𝗴𝗲, reached a version I feel genuinely good about sharing with the community. github.com/loukesio/ltc...
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Tatiana Moiseeva @tat1anamoiseeva.bsky.social · 15/07/2026
Our lab at Pitt is looking to hire a technician. Ideal candidate would be a recent graduate with some cell biology skills, looking to expand their experience before applying to a PhD program in a couple of years. If you are this person, interested in DNA replication, please email me. moiseevalab.com
moiseevalab.com
Tatiana Moiseeva Lab
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Eugene Valkov @eugenevalkov.bsky.social · 18/07/2026
Agincourt 2.0 🏴󠁧󠁢󠁥󠁮󠁧󠁿 vs 🇫🇷
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Alex Cope, PhD (he/him) @alexcope241.bsky.social · 08/07/2026
If anyone is looking for a postdoc/staff scientist with experience in evolutionary genetics, computational biology/bioinformatics, and/or various omics methods (RNA-seq, Ribo-seq, LC-MS/MS), I'm still looking! (1) doi.org/10.1126/scie... (2) doi.org/10.1073/pnas... (3) doi.org/10.1371/jour...
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Eugene Valkov @eugenevalkov.bsky.social · 09/07/2026
Looks like a genuine breakthrough for small(ish) particles
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Sebastian S. Cocioba @atinygreencell.bsky.social · 08/07/2026
@breakliquid.bsky.social and I are delighted to say our OpenEVO preprint is finally live! An open source hand-made turbidostat that's modular, affordable, and made to be customized. Designed with love for the research community. Enjoy!!!💚 www.biorxiv.org/content/10.6...
biorxiv.org
OpenEvo: An Open-Source Platform for Automated Evolution and Analysis
Here we introduce OpenEvo, a fully open-source, low-cost turbidostat platform for automated continuous culture and directed evolution experiments. Existing tools are expensive, complex, or lack open-s...
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Eugene Valkov @eugenevalkov.bsky.social · 06/07/2026
Best team won
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England Fans Cheer: Come On England!
ALT: England Fans Cheer: Come On England!
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Eugene Valkov @eugenevalkov.bsky.social · 04/07/2026
Has anyone been able to use Anthropic’s Fable for any coding task or analysis? It balked and reverted to Opus on literally everything for me
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Eugene Valkov @eugenevalkov.bsky.social · 01/07/2026
I intend to claim back pay if Nature Springer and Elsevier take this up
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Breaking Bad: This Is What We'Ve Been Working For
ALT: Breaking Bad: This Is What We'Ve Been Working For
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De-Sheng Ker @kerds.bsky.social · 30/06/2026
We solved a high resolution structure of the nucleosome core particle directly from nuclear extract from a single T25 flask (3 mL culture). No affinity purification. No sucrose gradients. Just lysate on grids. Raw data available now for anyone who wants to reprocess. www.biorxiv.org/content/10.6...
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Eugene Valkov @eugenevalkov.bsky.social · 27/06/2026
🤣 open.substack.com/pub/inprepar...
open.substack.com
Springer Nature CEO Opens Special Bottle Of Wine Upon News of Open Science Self-Cannibalization
LONDON—Springer Nature CEO Willem Klaassen-Hooft opened a 2016 Châteauneuf-du-Pape he had been saving for the right occasion Tuesday evening after reading that an open science advocate had used AI to ...
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Eugene Valkov @eugenevalkov.bsky.social · 25/06/2026
Great advice here
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Shicheng Guo @shihcheng.bsky.social · 23/06/2026
Ribonuclease DIS3 extends aging by generating crucial tRNA halves in C. elegans. 5'-tRH-Gln is vital for longevity via various interventions like dietary restriction. PMID:42168172, Nat Commun 2026, @NatureComms doi.org/10.1038/s41467-026-73295-7 #Medsky #Pharmsky #RNA #ASHG #ESHG 🧪
doi.org
Ribonuclease DIS3 delays aging and senescence by generating tRNA halves | Nature Communications
Transfer RNA (tRNA) halves (tRHs) are generated via the cleavage of tRNAs, but their roles in aging and longevity remain poorly understood. Here, we demonstrate a direct role of tRHs in aging in metazoans. Through a genetic screen using Caenorhabditis elegans, we identify DIS-3/DIS3 as a ribonuclease that catalyzes tRH generation, including 5′-tRH-Gln and 5′-tRH-Asp, from tRNAs. Among them, 5′-tRH-Gln is essential for longevity conferred by various interventions, including dietary restriction. Generation of 5′-tRH-Gln reduces translation via ribosomal protein binding and upregulates the SKN-1/NRF transcription factor responsible for lifespan extension. We further show that mammalian DIS3 contributes to tRH generation and delays cellular senescence through translation downregulation by another tRH, 5′-tRH-Cys. Overall, our data demonstrate that DIS-3/DIS3 is an evolutionarily conserved tRH-generating ribonuclease that counteracts organismal and cellular aging. Direct roles of tRNA halve
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Eugene Valkov @eugenevalkov.bsky.social · 23/06/2026
#cryoem folks- we keep seeing this popping up in 2d classes. Sample is a recombinant complex from insect cells
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Eugene Valkov @eugenevalkov.bsky.social · 21/06/2026
Will GNU/Linux will become the OS for 🇳🇴 schools then?
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Svetlana Dodonova @dodonova-sveta.bsky.social · 19/06/2026
Excited to share our new preprint! 🧬❄️ by brilliant @mdreimann.bsky.social and great collaborators! Using cryo-ET&EM, we reveal archaeal chromatin in a near-native state: variable-beads-on-a-string fibers shaped by growth phase and histone composition #ArchaeaSky www.biorxiv.org/content/10.6...
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David Bartel's Lab @bartellab.bsky.social · 16/06/2026
Two new preprints featuring work from @ryanymuller.bsky.social on PABPC biology! With important contributions from @eugenevalkov.bsky.social, Tanner Myers, and @kxwang.bsky.social
biorxiv.org
The molecular determinants of PABPC-mediated deadenylation rate
Deadenylation, the enzymatic shortening of the poly(A) tail, is typically the first committed step of mRNA decay. Deadenylation rates span nearly a 1000-fold range between transcripts and are governed...
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Eugene Valkov @eugenevalkov.bsky.social · 15/06/2026
prepublication checklist
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Eugene Valkov @eugenevalkov.bsky.social · 13/06/2026
I would seriously doubt that, but will find out for sure in a few weeks
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Rita Strack @ritastrack.bsky.social · 11/06/2026
Nature Comms is seeking an editor with expertise in clinical infectious diseases urldefense.com/v3/__https:/...
urldefense.com
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Lara Krüger @lara-kruger.bsky.social · 09/06/2026
📢 We are looking for a Junior Group Leader to join us at @institutcurie.bsky.social! Having joined the department just over a year ago, I can honestly say that it is an exceptionally stimulating and supportive scientific environment, filled with outstanding colleagues — all in the heart of Paris.
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Eugene Valkov @eugenevalkov.bsky.social · 08/06/2026
It really doesn’t work by “locking onto the mutated KRAS gene”. But good news nonetheless.
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Eugene Valkov @eugenevalkov.bsky.social · 31/05/2026
They called it “EuroOffice”? 😂
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Eugene Valkov @eugenevalkov.bsky.social · 17/05/2026
“If I sit really still perhaps he won’t see me”
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Eugene Valkov @eugenevalkov.bsky.social · 17/05/2026
👇🏻💯
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niels-fischer.bsky.social @niels-fischer.bsky.social · 13/05/2026
How does a scanning ribosome decide where to start protein synthesis? In our new bioRxiv preprint, we identify an extended translation initiation sequence, the eTIS, an ~80-nt region around the start codon that shapes initiation efficiency: www.biorxiv.org/content/10.6... #Ribosome #CryoEM #mRNA
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Ahmad Jomaa @jomaalab.bsky.social · 13/05/2026
Excited to share our work uncovering SNOR, a ribosome-associated factor that promotes translation restart after dormancy published in Nature!! This was, as usual, a wonderful collaborative effort between our group and the Mattei Lab @simonemattei.bsky.social @embl.org www.nature.com/articles/s41...
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