Sign in

Ali Turk

@turkchembio.bsky.social
526 followers 627 following 1 posts

Chemical Biologist in the Schroeder lab at Cornell

PostsRepliesMedia
Reposted by Ali Turk
Jake Yeston @jakeyeston.bsky.social · 07/10/2026
Even 17 years later I still find this particular result astonishing. Congrats to Profs Kagan and Soai for amplifying our amazement along with the chemistry! www.science.org/doi/10.1126/...
science.org
Asymmetric Autocatalysis Triggered by Carbon Isotope (13C/12C) Chirality
The origin of chirality in asymmetric autocatalysis is due to carbon isotope substitution.
0288
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 26/09/2026
Mammalian cells produce and store a sulfur compound for antioxidant protection @science.org www.science.org/doi/10.1126/... www.science.org/doi/10.1126/...
095
Reposted by Ali Turk
Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 24/09/2026
“Many of the greatest scientific breakthroughs have emerged from this ability to…challenge prevailing conceptual frameworks…it remains unclear whether [AI systems] can deliberately perform this kind of conceptual reframing.” www.nature.com/articles/s41...
nature.com
Scientific culture in the age of AI - Nature Cell Biology
Recent changes in Genentech’s scientific organization, occurring as the company makes artificial intelligence (AI) increasingly central to its research strategy, highlight a broader question facing bi...
03715
Reposted by Ali Turk
Anil Seth @anilseth.bsky.social · 16/09/2026
1/6 An extraordinary @nature.com paper has just landed from the lab of @sergiuppasca.bsky.social. They found a way to create "xenocortical mice" which have ~92% of their cortex occupied by a cortical organoid derived from human stem cells.
69140
Reposted by Ali Turk
Carrie Adler @carrieadler.bsky.social · 14/09/2026
Come be my colleague here in Ithaca! We're looking for a colleague doing cool science in the realm of genome editing, structural biology, or pharmacology. Or all of the above. apps.hr.cornell.edu/recruiting/f...
apps.hr.cornell.edu
Academic Career Opportunities
055
Reposted by Ali Turk
Dirk Trauner @dirktrauner.bsky.social · 14/09/2026
The Department of Chemistry at the University of Pennsylvania invites applications for a tenure-track position at the rank of Assistant Professor in the broadly defined area of organic chemistry. I have the honor of chairing the search committee. apply.interfolio.com/192648
12914
Reposted by Ali Turk
Jeremy Baskin @jeremybaskin.bsky.social · 04/09/2026
Come be my colleague! Cornell Chemistry & Chemical Biology is hiring TWO tenure-track faculty: assistant professor in chemical biology and open rank in quantum materials. Applications due Oct 15 — academicjobsonline.org/ajo/jobs/32602 #chemjobs
academicjobsonline.org
Cornell University, Chemistry and Chemical Biology
Job #AJO32602, WDR-00061091 Assistant Professor/Open Rank Professor - Chemistry and Chemical Biology, Cornell University (Ithaca, NY), Chemistry and Chemical Biology, Cornell University, Ithaca, New Y...
03425
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 02/09/2026
Engineering inflammation-responsive proteins through nitric oxide-caged amino acids @natbiomedeng.nature.com www.nature.com/articles/s41...
021
Reposted by Ali Turk
Nature Chemistry @natchem.nature.com · 02/09/2026
Palladium-triggered bioorthogonal phenylalanine decaging #chemsky
dlvr.it
Palladium-triggered bioorthogonal phenylalanine decaging
Nature Chemistry, Published online: 02 September 2026; doi:10.1038/s41557-026-02226-2Chemically manipulating phenylalanine’s purely hydrocarbon side chain in living systems is challenging. Now this has been achieved through biocompatible, palladium-triggered decaging of iodine-caged phenylalanine. This enables on-demand control of live-cell hydrophobic interactions as well as π interactions, which spans from fluorophore activation and peptide disassembly to protein binding and tumour–immune cell recognition.
011
Reposted by Ali Turk
Craig Kaplan @triggerloop.bsky.social · 28/08/2026
Wow- the beneficial function of the drugs Empagliflozin etc (Jardiance etc) on heart function is an off target direct effect on another enzyme www.science.org/doi/10.1126/...
science.org
SGLT2 inhibitors activate pantothenate kinase in the human heart
Sodium-glucose cotransporter 2 inhibitors (SGLT2i) reduce mortality in heart failure, but their pharmacological target remains unclear. In this study, we showed that SGLT2i directly activate pantothen...
132
Reposted by Ali Turk
Nature Chemistry @natchem.nature.com · 28/08/2026
Cyclopropanol can function as a caged dual-functional warhead for selective electrochemical bioconjugation #chemsky
dlvr.it
Cyclopropanol can function as a caged dual-functional warhead for selective electrochemical bioconjugation
Nature Chemistry, Published online: 28 August 2026; doi:10.1038/s41557-026-02227-1Spatiotemporal control over bioorthogonal reactions remains challenging. Now cyclopropanol has been shown to act as a functional moity that is inert under physiological conditions but can be selectively activated by mild electrochemical stimuli to preferentially modify acidic amino acids, such as glutamate and aspartate, within hydrophobic regions of proteins.
053
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 27/08/2026
Automated prototyping of genetic codes www.nature.com/articles/s41... @geochurch.bsky.social @harvard.edu @nature.com
011
Reposted by Ali Turk
bioRxiv Microbiology @biorxiv-microbiol.bsky.social · 23/08/2026
Human Gut Bacteria Convert Endogenous Steroids into Host Cortisol Shuttle Inhibitors www.biorxiv.org/content/10.64898/20…
052
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 19/08/2026
Virus deploys a ‘loose cannon’ enzyme to overpower bacterial defences @nature.com @embl.org www.nature.com/articles/d41... www.nature.com/articles/s41...
1124
Reposted by Ali Turk
Nature Chemical Biology @natchembio.nature.com · 17/08/2026
Photoproximity labeling of c-Myc reveals SLK as a cancer-specific co-regulator www.nature.com/articles/s41...
nature.com
Photoproximity labeling of c-Myc reveals SLK as a cancer-specific co-regulator - Nature Chemical Biology
A photoproximity-labeling approach maps cancer-specific partners of the c-Myc oncoprotein, revealing that the kinase SLK binds and stabilizes c-Myc, drives tumor growth and offers a new strategy to ta...
033
Reposted by Ali Turk
Nature Chemical Biology @natchembio.nature.com · 17/08/2026
Biological circuit boards are engineered that compute functions based on the spatial arrangement of different bacterial strains printed on a surface www.nature.com/articles/s41...
nature.com
Living circuit boards built by printing bacterial transistors - Nature Chemical Biology
Electronic circuit boards carry out different operations on the basis of the configuration of their components. Now, equivalent biological circuits are engineered that compute functions on the basis o...
063
Reposted by Ali Turk
Harmit Singh Malik @harmitmalik.bsky.social · 13/08/2026
MxA is one of the broadest antiviral proteins mammals make. It’s a big reason most bird flu strains never get a foothold in people. The rare ones that succeed have learned to dodge it. How MxA actually recognizes viral targets at the molecular level is unknown for a bunch of technical reasons.
25923
Reposted by Ali Turk
Nature Chemical Biology @natchembio.nature.com · 12/08/2026
A chemical screen identifies a PRC2-AR-ETV1-PPP axis that regulates pancreatic β cell identity features in α cells. An intermediate PPP metabolite induces metabolic reprogramming to stimulate β cell regeneration www.nature.com/articles/s41...
nature.com
Metabolic reprogramming drives pancreatic β cell neogenesis from α cells - Nature Chemical Biology
A chemical screen identified a PRC2–AR–ETV1–PPP axis that regulates β cell identity features in α cells. An intermediate PPP metabolite, methyl esterified 6-phosphogluconate, induced metabolic reprogr...
051
Reposted by Ali Turk
Nature Chemical Biology @natchembio.nature.com · 12/08/2026
Bronsted-basic small molecules activate GTP hydrolysis in KRAS-Q61 mutants www.nature.com/articles/s41...
nature.com
Brønsted-basic small molecules activate GTP hydrolysis in KRAS-Q61 mutants - Nature Chemical Biology
Through chemical complementation, Brønsted-basic small molecules rescue the loss of the catalytic glutamine side chain in KRAS-Q61X mutants, accelerating GTP hydrolysis up to 20-fold.
0103
Reposted by Ali Turk
Stefan Borsley @stefanborsley.bsky.social · 03/08/2026
First paper featuring one of my students out now in @jacs.acspublications.org! The brilliant Willow Baxter teamed up with the group of @giuliosflask.bsky.social to show how we can pump gradients across lipid bilayer membranes, and harness them to drive other processes. pubs.acs.org/jacsat/artic...
1157
Reposted by Ali Turk
Cell Chemical Biology @cp-cellchembiol.bsky.social · 10/08/2026
Online now! Online now! Chemical tools for inhibition and activity-based profiling of glucocerebrosidase in vitro and in vivo #chembiol
dlvr.it
Chemical tools for inhibition and activity-based profiling of glucocerebrosidase in vitro and in vivo
Glucocerebrosidase (GCase) has been implicated in Parkinson’s disease, but unraveling its role is hampered by a lack of selective chemical tools. Wang et al. develop chemical tools that enable selective inactivation and monitoring of GCase in vitro and in vivo, facilitating studies of disease mechanisms and efficacy of GCase-targeting therapies.
021
Reposted by Ali Turk
bioRxiv Biochemistry @biorxiv-biochem.bsky.social · 10/08/2026
Omics-scale capture of electrophilic metabolites www.biorxiv.org/content/10.64898/20…
011
Reposted by Ali Turk
bhadurilab.bsky.social @bhadurilab.bsky.social · 04/08/2026
Congratulations to Jessenya Mil and Jose Soto on their published paper, online now!! We are so excited that this is out! www.cell.com/cell/fulltex...
cell.com
Metabolic atlas of early human cortex reveals glycolytic remodeling and pentose phosphate pathway control of cell fate transitions
The developing human cortex is composed of diverse cell types, but how nutrient metabolism shapes their fate has remained unclear. This study maps the metabolic landscape of the developing human corte...
192
Reposted by Ali Turk
Manx Neurobiologist @garyrlewin.bsky.social · 15/07/2026
For me this paper is a career highlight..truly astonishing biology! www.nature.com/articles/s41...
nature.com
A queen odour mediates reproductive suppression in a eusocial mammal - Nature
Naked mole-rat (Heterocephalus glaber) queens produce isopropyl myristate, a low-volatility ester that high-ranking animals detect and avoid, which alters prolactin and progesterone in other females t...
27532
Reposted by Ali Turk
Di Jiang @dijiang319.bsky.social · 30/07/2026
Why is the X chromosome rich in L1 mobile elements? @science.org X-chromosome inactivation draws L1 mutagenesis to the human X chromosome | Science www.science.org/doi/10.1126/...
science.org
X-chromosome inactivation draws L1 mutagenesis to the human X chromosome
X-chromosome inactivation (XCI) enables gene dosage compensation in XX eutherians. Long interspersed element-1 (LINE-1 or L1) retrotransposons are unusually abundant on the human X chromosome and are ...
16018
Reposted by Ali Turk
Brett Garabedian, PhD @brettgarabedian.bsky.social · 30/07/2026
“…we report that CD19, an assumingly exclusive B cell marker, is transferred via trogocytosis when B cells activate T cells” Trogocytosis is fascinating, and really complicates the picture for the targeting ‘mobile’ receptors. Same recently reported for Siglecs, and I’m sure many, many others
nature.com
B cell CD19 is transferred between immune cells in mice and humans - Nature Communications
Trogocytosis enables the transfer of membrane-bound antigens during pathogenic B-T cell interactions. Here, the authors utilize mouse and human cell models and demonstrate that the B cell marker CD19 ...
011
Reposted by Ali Turk
Vaughn Cooper @vscooper.micropopbio.org · 26/07/2026
In 2014, Jason Rosch and I met at a GRC in Tuscany and sketched an idea on a cocktail napkin: what if we evolved S.pneumo in mice, treated them with antibiotics, varied their immune systems and watched what won? 11 years and a huge team effort later, it's out in @cp-cellhostmicrobe.bsky.social 🧵
211245
Reposted by Ali Turk
Craig Kaplan @triggerloop.bsky.social · 26/07/2026
This I think has been the goal of examining models that can regenerate - that gene regulatory networks are there to do these things even in organisms that don’t see to have the ability
083
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 21/07/2026
CSF clearance through arachnoid fenestrations to olfactory meningeal lymphatics @cellcellpress.bsky.social www.cell.com/cell/fulltex...
0113
Reposted by Ali Turk
erzbergerlab.bsky.social @erzbergerlab.bsky.social · 16/07/2026
www.nature.com/articles/s41...
nature.com
Molecular basis of polyadenylated RNA fate determination in the nucleus - Nature
Biochemical, structural and cell biological analyses reveal that UAP56 (DDX39B) assembles with a TREX-2–like module that redirects non-functional polyadenylated RNAs from export to degradati...
041
Reposted by Ali Turk
Marco Trujillo @trujillolab.bsky.social · 16/07/2026
Endogenous molecular glue acts as a signal in human cells - akin to auxin! Metabolite glues as a means of purine sensing and chemotherapeutic response www.nature.com/articles/s41...
nature.com
Metabolite glues as a means of purine sensing and chemotherapeutic response - Nature
Purines can act as endogenous molecular glues in human cells by anchoring a rate-limiting enzyme in purine biosynthesis to its inhibitor, and modifying this mechanism could provide a way to improve th...
0105
Reposted by Ali Turk
Sorek Lab @soreklab.bsky.social · 09/07/2026
Our paper out in Science today: The Metis defense system senses molecular byproducts released when a phage degrades the bacterial genome, and then prevents replication of the phage in the infected cell Congratulations @ostermanilya.bsky.social and co-authors!
science.org
Bacteria sense virus-induced genome degradation via methylated mononucleotides
Phages often degrade the genome of their bacterial host to individual nucleotides. Here we describe Metis, a bacterial defense system that directly senses phage-mediated host genome degradation. Metis...
410353
Reposted by Ali Turk
Nature Chemistry @natchem.nature.com · 08/07/2026
Genetically targeted photocatalytic organic dyes for spatiotemporally controlled organic synthesis in specific living cells #chemsky
dlvr.it
Genetically targeted photocatalytic organic dyes for spatiotemporally controlled organic synthesis in specific living cells
Nature Chemistry, Published online: 08 July 2026; doi:10.1038/s41557-026-02195-6Adapting abiotic catalysis to living cells broadens the scope of in situ non-natural synthesis, but it is challenging to achieve synthetic versatility at cellular-level spatiotemporal organization. Now organic dyes have been shown to perform light- and genetically patternable photocatalytic synthesis, enabling in situ C–H functionalization and the construction of ligands for protein translocation.
031
Reposted by Ali Turk
Ryan Flynn @raflynn5.bsky.social · 29/06/2026
Taking our first steps towards sequencing the extracellular matrix by “Intact and single-molecule analysis of heparan sulfate” from @phristov.bsky.social in the lab, in collaboration with Miten Jain's lab. "HS-nano-seq" www.biorxiv.org/content/10.6...
12611
Reposted by Ali Turk
Sharon 🪳🌹 @sharonk.bsky.social · 23/06/2026
there's something remarkable how on a scientific level we're performing what would essentially be miracles and on a cultural/political level, we're going in reverse
3058801287
Reposted by Ali Turk
Yamuna Krishnan @krishnanyamuna.bsky.social · 22/06/2026
1/ Mitochondrial Na⁺ links metabolism, Ca2+ signaling and disease. We know how it gets in, how it gets out, and proteins that use it. But: we've never actually seen Na⁺ in single mitochondria in live cells. We started with an unusual observation, went down a rabbit hole & found some cool biology .
A mitochondrion showing Ca2+ entering through the MCU, exchanged for Na+ by NCLX, Complex I acting as a Na+/H+ exchanger, and various transporters that use Na+ to move their substrates in and out of the mitochondria
411139
Reposted by Ali Turk
Kranzusch Lab @kranzuschlab.bsky.social · 12/06/2026
How do human cells defend against viruses? @sgfern.bsky.social discovers that human immune proteins named ISGs target ancient features of replication shared between animal and bacterial viruses – opening analysis of human immunity to the power of bacterial genetics www.biorxiv.org/content/10.6...
311565
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 11/06/2026
Placenta metabolic clock: NAD+ depletion triggers a countdown to birth in mice @science.org www.science.org/doi/10.1126/... www.science.org/doi/10.1126/...
science.org
The placental metabolic clock
NAD+ depletion triggers a countdown to birth in mice
0104
Reposted by Ali Turk
David Schoppik @schoppik.com · 01/06/2026
Big if true: www.biorxiv.org/content/10.6...
biorxiv.org
1183
Reposted by Ali Turk
bioRxiv Biochemistry @biorxiv-biochem.bsky.social · 24/05/2026
Unconventional biocatalytic strategies orchestrate synthesis of the nucleoside analog sinefungin www.biorxiv.org/content/10.64898/20…
031
Reposted by Ali Turk
Nature Biotechnology @natbiotech.nature.com · 22/05/2026
Photosynthesis in mammalian corneal cells boosts energy production and reduces inflammation #NBThighlight www.cell.com/cell/fulltex...
cell.com
Transplanting light-dependent reactions for mammalian eye photosynthesis
Therapeutic delivery of LEAF, a chloroplast-derived nanoscale thylakoid supercomplex system, enables mammalian corneal cells to generate photosynthetic NADPH and ATP that suppress oxidative stress and...
0112
Reposted by Ali Turk
Jenna Norton @jenna-m-norton.bsky.social · 20/05/2026
Powerful essay, please read. "Children will die from this. Not metaphorically. Not eventually." www.nytimes.com/2026/05/13/o...
nytimes.com
Opinion | My Son Never Turned 7. Because of Choices in Washington, Others Won’t Either.
35429
Reposted by Ali Turk
David Solecki @so-lets-kilab70.bsky.social · 11/05/2026
Mind-blowing cell action alert! Watching vesicle cargo lanes light up like a @FedEx highway in real-time under the #microscope. Who knew that a home-brewed phosphatidic acid imaging probe would look so stunning in fibroblasts? Too late for #FluorescenceFriday but just in time for #MicroscopyMonday
1418
Reposted by Ali Turk
Science Magazine @science.org · 09/05/2026
Breaking news: Indiana University plant microbiologist Roger Innes has been locked out of his laboratory by the school in response to a request by one of his federal funders. The move comes after Innes complained about the government’s prosecution of Chinese postdocs. scim.ag/4tsDqRr
scim.ag
After USDA request, Indiana plant biologist locked out of lab by school
Move comes after Roger Innes complained about the government’s prosecution of Chinese postdocs
19839442216
Reposted by Ali Turk
L.-C. Campeau @drlcsquare.bsky.social · 08/05/2026
www.science.org/doi/10.1126/...
science.org
Biocatalytic cascades enable manufacture of the macrocyclic peptide enlicitide
Historically, many compelling therapeutic targets have been accessible only by injectable biologic drugs. Macrocyclic peptides, such as the proprotein convertase subtilisin/kexin type 9 inhibitor enli...
001
Reposted by Ali Turk
John Prensner @johnprensner.bsky.social · 06/05/2026
Major new work by the #TransCODE Consortium out today in @nature.com. Read all about our efforts to shed light onto the forgotten areas of the human proteome. #Microproteins #Peptideins #DarkProteome This was a huge global collaboration, in part funded via #NIH www.nature.com/articles/s41... 1/
nature.com
Expanding the human proteome with microproteins and peptideins - Nature
A large-scale proteomics analysis of the dark proteome by the TransCODE Consortium reveals many translated non-canonical open reading frames to encode microproteins and peptideins.
23314
Reposted by Ali Turk
Elliot Murphy @elliot-murphy.bsky.social · 01/05/2026
Amazing work ⚡️ 🧠 “Laminar organization of cellular microcircuits modulating human interictal epileptiform discharges” www.nature.com/articles/s41...
nature.com
Laminar organization of cellular microcircuits modulating human interictal epileptiform discharges - Nature Neuroscience
High-density single-neuron recordings in patients with epilepsy revealed interictal discharges are generated by structured laminar circuits. These circuits overlapped with cognitive circuits and could...
074
Reposted by Ali Turk
Keri Backus @keribackus.bsky.social · 03/05/2026
Super excited to launch POCAxOMAP with @dschweppe.bsky.social and @oligopain.bsky.social and led by Eli Biletch, Conor Herlihy and Lidan Li. If you’ve ever wanted to do proximity labeling on DNA, RNA, or protein without genetic engineering, look no further. www.biorxiv.org/content/10.6...
18234
Reposted by Ali Turk
Waggoner Lab @labwaggoner.bsky.social · 30/04/2026
Vaginal bacteria turn newborn skin into a beneficial ‘bioreactor’ for lipid promoting brain development. Vaginal fluid swab can provide this to C-section babies @science.org commentary on @cp-cellhostmicrobe.bsky.social report www.science.org/content/arti... www.cell.com/cell-host-mi...
154
Reposted by Ali Turk
Amy C Fan (she/her) @amycfanphd.bsky.social · 29/04/2026
Excited to announce our new study (w/ @maxkrummel.bsky.social) published today @nature.com: Macrophages “hold our living identities” by taking tiny bites from living cells and presenting this information to CD8 T cells. www.nature.com/articles/s41... #immunology #cellbiology @immunox.bsky.social
nature.com
Submicrometre sampling of living cells by macrophages - Nature
Macrophages can sample antigens from living cells through a trogocytosis-like mechanism that routes ingested material away from degradation, a finding that delineates a previously unknown pathway...
16022