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Rangan Lab

@ranganlab.bsky.social
185 followers 221 following 12 posts

Germline development @IcahnMountSinai @CDRBSinai scholar.google.com/citations?user=G…

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Philippe Batut @philippebatut.bsky.social · 10/09/2026
🧬🔬 Why are enhancers transcribed and how does that impact gene regulation? I’m really excited to share our new paper in @science.org showing that noncoding RNAs control the timing of gene activation in embryos. With Mike Levine #ScienceResearch @columbiamed.bsky.social A few highlights below... 🧵👇
science.org
Noncoding transcription controls the developmental dynamics of long-range gene regulation
The genomic regions regulating gene expression are often themselves transcribed into a variety of noncoding RNAs (ncRNAs). However, the regulatory roles of this noncoding transcription remain largely ...
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Reposted by Rangan Lab
Suckjoon Jun’s lab at UCSD @junlab.bsky.social · 28/09/2026
1/5 Do you use GFP to measure protein abundance? Be very careful. Our new bioRxiv preprint shows that, under translation inhibition, fluorescence can stop tracking how much reporter protein is actually there. Please share widely.
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H. B. Beryl Rappaport @hbrappap.bsky.social · 22/09/2026
Our description of fire amoeba, 𝘐𝘯𝘤𝘦𝘯𝘥𝘪𝘢𝘮𝘰𝘦𝘣𝘢 𝘤𝘢𝘴𝘤𝘢𝘥𝘦𝘯𝘴𝘪𝘴, is now online at Cell! Thanks @oliverio.bsky.social and amazing team for questioning the limits of eukaryotes! 🔥 www.cell.com/cell/fulltex...
cell.com
A geothermal amoeba sets a new upper temperature limit for eukaryotes
The amoeba Incendiamoeba cascadensis demonstrates that eukaryotic life can withstand temperatures beyond what was thought possible and sheds light on molecular strategies for survival in extreme heat.
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Rangan Lab @ranganlab.bsky.social · 28/09/2026
www.cell.com/cell/fulltex...
cell.com
Direct cell-to-cell transmission of retrotransposons
Retrotransposons can infect neighboring cells using a mechanism that relies on a small fusogen-like protein rather than on the envelope protein that is typically required for infection.
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Reposted by Rangan Lab
Anders Sejr Hansen @andersshansen.bsky.social · 28/09/2026
Very nice new paper from Paggi, Long, Zhang using physical modeling of RCMC data to reconstruct physical structures of euchromatin at the nucleosome scale: Euchromatin forms condensed domains and E-P interactions largely occur on the surface! www.nature.com/articles/s41...
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Kranzusch Lab @kranzuschlab.bsky.social · 10/09/2026
Stunning cryo-ET analysis from the Harrison Lab capturing every stage of how non-membrane viruses infect animal cells www.science.org/doi/10.1126/...
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Waggoner Lab @labwaggoner.bsky.social · 26/09/2026
Mammalian cells produce and store a sulfur compound for antioxidant protection @science.org www.science.org/doi/10.1126/... www.science.org/doi/10.1126/...
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Kazuhiro Maeshima @kazu-maeshima.bsky.social · 26/09/2026
🧬 Highly related @natgenet.nature.com paper from @binzmit.bsky.social group, using nucleosome-resolution chromatin modeling: Euchromatin forms condensed domains with short active regions on the surface www.nature.com/articles/s41... Congratulations! 🎉
nature.com
Euchromatin forms condensed domains with short active regions on the surface - Nature Genetics
Simulations integrating micro-C and imaging data provide a coherent view of chromatin organization from nucleosomes to clutches to domains, revealing that most regions form compact domains but short r...
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Craig Kaplan @triggerloop.bsky.social · 25/09/2026
Cryo-EM peeps are living the dream www.science.org/doi/10.1126/...
science.org
In-cell structures visualize human pre-ribosome assembly in the nucleolus
In eukaryotes, ribosome biogenesis initiates within the nucleolus, a hallmark multilayered compartment of the nucleus. Structures of pre-ribosomes have been characterized ex situ, but their assembly p...
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SCBRM Department @ MSSM @scbrmmountsinai.bsky.social · 25/09/2026
Congratulations to the @joelwblanchard.bsky.social lab on their two new studies on miBrains 🧠 Read more about their findings here: www.mountsinai.org/about/newsro...
mountsinai.org
Mount Sinai Researchers Identify How APOE4 Gene Damages Brain Blood Vessels in Alzheimer’s Disease
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Rasmus Jensen @rasmusjensen.bsky.social · 25/09/2026
🎉 Out today in Cell: the paper I've been looking forward to sharing for a long time 🎉 We used cryo-ET to find a molecular machine nobody knew existed on the surface of a minimal bacterium, and worked out what it does. 🧵(1/7) #TeamTomo #cryoET
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Maya Voichek @mayavoichek.bsky.social · 24/09/2026
Super excited to share my postdoctoral work at @imbavienna.bsky.social @viennabiocenter.bsky.social - We discovered that some retrotransposons, or "jumping genes" 🧬, are able to spread from cell to cell via a new viral infectivity route. A short thread: 🧵👇 (1/7)
AI-generated illustration of the soma-to-germline transmission of retrotransposons described in our work
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Josh Currie @joshcurrie.bsky.social · 24/09/2026
Dreams do come true!! Pretty stoked to be invited to the invertebrate lovefest that is #cnidofest2026 to talk about technical details around live imaging regeneration. Amazing talks so far. @cnidofest.bsky.social
Two scientists in awesome meeting T-shirts express enthusiasm for cnidarians
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Maitreya Dunham @maitreya.bsky.social · 24/09/2026
Exciting news: @uwgenome.bsky.social will be hiring for two tenure-track faculty positions this year, one open rank and one assistant professor. Both are “Genome Sciences” interpreted broadly so we welcome applicants working in a variety of fields and methods. Ad will be out shortly.
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Cedric Feschotte @cedricfeschotte.bsky.social · 24/09/2026
Thrilled to see this published today! Truly special because we made the initial discovery >15 yrs ago! We found two copies of a human gene called BC200 embedded in a human poxvirus. BC200 blurs the line between gene & transposon—both functional & mutagenic! www.science.org/doi/10.1126/... 🧵1/n
science.org
Escape of the BC200 gene to a human poxvirus reveals its persistent transposition in primates
Transposable elements mobilize within and occasionally between genomes, including from host to virus. We identified two insertions of the human BC200 noncoding RNA gene in the poxvirus molluscum conta...
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Harmit Singh Malik @harmitmalik.bsky.social · 24/09/2026
I see that @anthropic.com is now competing with PhD students in Biology/Bioengineering labs, whose biggest worry until now was being inevitably scooped by the Feng Zhang and Jennifer Doudna labs. Very different from Wild West days of RT discoveries in my PhD. www.anthropic.com/news/claude-...
anthropic.com
Claude discovers a novel enzyme system
In early results from our new life sciences research lab, Claude agents found an enzyme system whose function is still unknown.
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Harmit Singh Malik @harmitmalik.bsky.social · 23/09/2026
Then and Now: The Rapid Evolution of Harmit Malik www.the-scientist.com/then-and-now...
the-scientist.com
Harmit Malik Dives Into Viral Evolution and Speciation | The Scientist
Fascinated by evolution and driven by curiosity, Malik studies everything from viruses to Drosophila and, like his research subjects, is constantly reinventing himself.
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Arjuna Rajakumar PhD @arjunarajakumar.bsky.social · 19/09/2026
So proud of my lab mate @sagrill.bsky.social (whose on the job market 👀) for this magnum opus from @remlehmann.bsky.social lab @whiteheadinstitute.bsky.social ScRNA-seq of 🪰 germ cells reveals new biology, answers age old questions, and proposes new paradigms! 1/8 www.biorxiv.org/content/10.6...
Drosophila stage 10b embryo w/HCR staining marking two germ cell clusters. One will successfully colonize the gonad and the other, like tears in the rain, will be lost forever
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bioRxiv Developmental Biology @biorxiv-devbio.bsky.social · 18/09/2026
Decoupling Transcription from Cell Fate Preserves Germ Cell Totipotency www.biorxiv.org/content/10.64898/20…
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Doudna Lab @doudna-lab.bsky.social · 19/09/2026
Out now in Science: Two papers from our lab reveal VIPR, an RNA-guided DNA-targeting system in bacteriophages, providing clues to the origins of CRISPR www.science.org/doi/10.1126/... www.science.org/doi/10.1126/... Congrats to Peter Yoon, @kenjmloi.bsky.social @terryzzy.bsky.social, T.Docter & team
science.org
A noncontiguous code for RNA-guided DNA recognition at the origin of CRISPR-Cas
CRISPR-Cas provides RNA-mediated adaptive immunity, but how its first RNA-guided effector arose is unclear. In this study, we report the discovery of Viral Interference Programmable Repeat (VIPR) syst...
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Carrie Adler @carrieadler.bsky.social · 14/09/2026
Come be my colleague here in Ithaca! We're looking for a colleague doing cool science in the realm of genome editing, structural biology, or pharmacology. Or all of the above. apps.hr.cornell.edu/recruiting/f...
apps.hr.cornell.edu
Academic Career Opportunities
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Pau Pascual @paupascual.bsky.social · 09/09/2026
New paper from the Capelson Lab in collaboration with the @ranganlab.bsky.social where they found that Nup93-2 only partially overlaps with mature NPCs. This off-pore Nup pool helps silence Polycomb domains. 🤩https://www.biorxiv.org/content/10.64898/2026.08.28.747911v1
biorxiv.org
Distinct functions of Nup93 paralogs in tumor growth and Polycomb-mediated repression of JAK/STAT signaling
Nuclear pore complexes (NPCs) are nuclear envelope (NE)-embedded protein assemblies that mediate nucleocytoplasmic exchange and interact with the genome, including binding of an NPC component Nup93 to...
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Journal of Cell Biology @jcb.org · 09/09/2026
GCL pruning of PIP3 establishes the soma-germline boundary. From Mariyah Saiduddin, Ruth Lehmann @remlehmann.bsky.social and colleagues: rupress.org/jcb/article/... 📕 From our #Lipid and #Membrane collection: rupress.org/jcb/collecti... #EMBOLipidCode
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Rangan Lab @ranganlab.bsky.social · 01/09/2026
New preprint in collaboration with the Capelson lab. Roles for nucleoporin paralogs.
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bioRxiv Developmental Biology @biorxiv-devbio.bsky.social · 01/09/2026
Distinct functions of Nup93 paralogs in tumor growth and Polycomb-mediated repression of JAK/STAT signaling www.biorxiv.org/content/10.64898/20…
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Mark Pownall @mpownall.bsky.social · 17/08/2026
First preprint from the lab 🚨 We asked when and how global chromatin organization emerges during early development 🐟
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Harmit Singh Malik @harmitmalik.bsky.social · 12/08/2026
Amid the rush to burn DEI infrastructure to the ground, it’s worth remembering that the goal was never favoritism. It was a fair shot for people long excluded by unconscious or real bias — prominent scientists, including Nobel laureates, openly argued some “races” were innately unsuited for science.
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Matthew Taliaferro @jmtali.bsky.social · 12/08/2026
Excited to share our newest work! We asked whether RNA molecules need to be in a specific place in the cell to do their job. We found that a single RNA must reach the midbody, the structure that pinches two dividing cells apart, for cell division to finish efficiently. 🧵⬇️
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Development @dev-journal.bsky.social · 13/08/2026
Issue 14 is now complete! Cover: During early oogenesis in the fruit fly, oocytes arise from germ cells (green) and are packaged linearly into discrete egg chambers, surrounded by somatic follicle cells (outlined in magenta). See Jung et al. journals.biologists.com/dev/issue/15...
Cover: During early oogenesis in the fruit fly Drosophila melanogaster, oocytes arise from germ cells (green) and are packaged linearly into discrete egg chambers, surrounded by somatic follicle cells (outlined in magenta). See Research Article by Jung et al. (dev205460).
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Böke Lab @bokelab.bsky.social · 12/08/2026
What does an ovary actually look like as it ages—one oocyte at a time? We mapped >85,000 oocytes in >100 intact mouse ovaries, in 3D, across the reproductive lifespan. And the ovary turned out to be much more organized than we expected. 🧵 1/5 www.nature.com/articles/s43...
nature.com
Three-dimensional mapping of intact ovaries reveals the aging dynamics of the ovarian reserve - Nature Aging
The spatiotemporal dynamics of the depletion of the ovarian reserve remain incompletely understood. Combining whole-ovary imaging, AI and modeling, the authors mapped over 85,000 mouse oocytes and fou...
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Genetics Society of America @genetics-gsa.bsky.social · 29/07/2026
Meet three of our #Dros27 plenary speakers! 🧠 Vanessa Auld 🪰 @nabroderick.bsy.social 🧬 Don Fox From glial biology to host-microbe interactions to genome stability and regeneration, they'll bring exciting science to Philadelphia. 🔗https://buff.ly/7IBPyFM
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Alex Eve @amjeve.uk · 11/07/2026
The #ISSCR2026 Anne McLaren Memorial Keynote is delivered by Azim Surani. Learn more about Azim's life and career in this @dev-journal.bsky.social interview by Ashley Moffett and @geraldinejowett.bsky.social.
doi.org
An interview with Azim Surani
Professor Azim Surani is the Director of Epigenomics and Germline Imprinting at the Gurdon Institute in Cambridge, UK. He is this year's recipient of both the prestigious Kyoto Prize and the Paul Ehrl...
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Reese Richardson @reeserichardson.bsky.social · 05/06/2026
The Thermo Fisher situation keeps getting worse. We've now collected 450+ problematic images presented as verification data in TF's antibody catalog. This includes: 🖌️ Dozens more images with duplications or painting 🖨️ Hundreds of blots that all share the same background (behold slideshow below)
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Yunsun Nam @yunsunnam.bsky.social · 05/06/2026
Excited to share our latest work! The oncogenic m5C writer NSUN2 achieves substrate specificity by recognizing RNA structure and conformational dynamics. RNA folding shapes methylation! Congratulations to the team! Thank you, colleagues and supporters! ttps://nature.com/articles/s41586-026-10582-9
nature.com
Substrate selectivity of the human RNA m5C methyltransferase NSUN2 - Nature
NSUN2 is an enzyme that adds a small chemical mark to RNA molecules and uniquely selects its targets based on specific sequence patterns and structural features.
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Abby Dernburg @adernburg.bsky.social · 22/05/2026
Yet more shenanigans that only damage the US scientific enterprise. www.insidehighered.com/news/quick-t...
insidehighered.com
Report: NIH, NASA Restrict Co-Authoring With Foreign Scientists
The National Institutes of Health and the National Aeronautics and Space Administration are targeting collaborations between U.S. scientists and foreign researchers, Science reports.
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Rangan Lab @ranganlab.bsky.social · 22/05/2026
@benforward3.bsky.social is running for State Rep in MA. Ben is a fellow scientist and fly biologist who has gone into public service, and I think supporting scientists running for office matters at every level. Support his campaign:https://secure.actblue.com/donate/ben-for-state-rep Please RT
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Mariko Bennett @nachoriko.bsky.social · 24/03/2026
I defended my PhD 10 years ago today. That was the least remarkable thing that happened that day. Sharing something I wrote about it last year. Since then "the horrors persist but so do we." And with dignity.
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James Briscoe @jamesbriscoe.bsky.social · 25/03/2026
Honoured and overwhelmed to receive the 2026 Waddington Medal. Science is a team effort, and I've been fortunate to work alongside exceptional people asking hard questions. Thank you to the BSDB and to everyone who has been part of the journey. bsdb.org/2026/03/24/2...
bsdb.org
2026 Waddington Medal Winner - James Briscoe - BSDB - British Society for Developmental Biology
We are very pleased to announce that this year’s Waddington medal winner is James Briscoe. His fundamental discoveries have helped shape our understanding of of how morphogens work, and he has played ...
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Rangan Lab @ranganlab.bsky.social · 23/03/2026
Amazing new work from the Hurd lab:Sperm keep their mitochondria but lose their mitochondrial genomes. This new preprint identifies the nuclease responsible — and shows it reads DNA structure, not sequence. tinyurl.com/3npwwk37
tinyurl.com
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Ben Ewen-Campen @benforward3.bsky.social · 03/03/2026
My paper on how the fruit fly foregut uses a modified cell cycle to respond to tissue damage and cell loss is now published :) www.nature.com/articles/s41... #proventriculus #drosophila
Screen shot of my paper Figure 6Figure 7
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Harmit Singh Malik @harmitmalik.bsky.social · 19/02/2026
The last two days to vote for the Flyboard elections. Don't put it off any longer. Vote now!!! Also, if you are on the fence, please register for #Dros26. I just did!
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bioRxiv Developmental Biology @biorxiv-devbio.bsky.social · 16/02/2026
Developmentally programmed nuclear pore complex replacement enables oocyte specification www.biorxiv.org/content/10.64898/20…
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Rangan Lab @ranganlab.bsky.social · 16/02/2026
New preprint in collab with Capelson & Schindler labs): Nuclear pore complexes are developmentally removed and rebuilt during oocyte specification. Blocking turnover prevents gene silencing and meiotic entry. Nuclear architecture renewal is required for cell fate. www.biorxiv.org/content/10.6...
biorxiv.org
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SCBRMSinai @scbrm.bsky.social · 21/10/2025
In the 2nd preprint from @mlodziklab.bsky.social, Weber et al. show that LRP5/6/arrow, the Wnt/bcatenin signaling specific co-receptor, is also required for Wnt/planar cell polarity establishment, a challenge and eye-opener for the Wnt field. www.biorxiv.org/content/10.1...
biorxiv.org
The Wnt co-receptor Arrow-LRP5/6 is required for Planar Cell Polarity establishment in Drosophila
Wnt-signaling, via β-catenin or the planar cell polarity (PCP) branch, is crucial for development, tissue homeostasis, and linked to many diseases. LRP5/6, arrow ( arr ) in Drosophila , is the obligat...
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SCBRMSinai @scbrm.bsky.social · 21/10/2025
Two exciting preprints from @mlodziklab.bsky.social lab. In the first preprint, Vuong and Mlodzik describe a novel, essential factor for bcatenin translocation to the nucleus, a big step forward to understand nuclear bcatenin localization. www.biorxiv.org/content/10.1...
biorxiv.org
A novel conserved protein associates with the IFT-A complex to mediate nuclear translocation of β-catenin in Wg/Wnt-signaling
Wingless (Wg)/Wnt signaling is critical throughout development and tissue homeostasis and associated with many disease states. Canonical Wg/Wnt-signaling is mediated by β-catenin (Arm in Drosophila ) ...
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European Drosophila Society @fly-eds.bsky.social · 24/09/2025
The @fly-eds.bsky.social is having its general assembly this saturday at 13:30 at #EDRC2025 , please join us to discuss our society and to find out more about @flybase.bsky.social and the current funding crisis
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EDRC2025 @edrc2025.bsky.social · 04/09/2025
There are only 8 days left to register to @edrc2025.bsky.social and we would like to thank all our sponsorss! We start acknowledging the support received from @biologists.bsky.social to #EDRC2025 Thank you!
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Rangan Lab @ranganlab.bsky.social · 05/09/2025
Registration is officially open for the 2026 EMBO Drosophila Meeting in Crete 🪰☀️. This flagship meeting brings together researchers from around the world to share discoveries, foster collaborations, and celebrate the power of Drosophila in advancing biology. Consider applying!
meetings.embo.org
Molecular and Developmental Biology of Drosophila
The principal theme of the EMBO Workshop is the Molecular and Developmental Biology of Drosophila. Supported by EMBO over four decades, this will be the 24th biennial “Crete meeting”. With the a…
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Marco MILAN LAB @milanlab.bsky.social · 04/09/2025
EMBO meeting on "Molecular and Developmental Biology of Drosophila" 21 – 27 June 2026 Registration is now open! Deadline next November 3rd! meetings.embo.org/event/26-dro...
meetings.embo.org
Molecular and Developmental Biology of Drosophila
The principal theme of the EMBO Workshop is the Molecular and Developmental Biology of Drosophila. Supported by EMBO over four decades, this will be the 24th biennial “Crete meeting”. With the a…
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Development @dev-journal.bsky.social · 05/09/2025
Actin up: Mrtfa regulates actomyosin and apical constriction This Research Highlight showcases the work from Keiji Itoh, Olga Ossipova, Sergei Y. Sokol: journals.biologists.com/dev/article/...
Fig. 3. Mrtfa depletion leads to reduced F-actin levels and increases apical domain size in the neural plate. (A) One dorso-animal site of eight-cell embryos was injected with control MO (Co MO) or Mrtfa-MOsp (40 ng each) with lineage tracer MyrGFP (10 pg) and allowed to develop until control embryos reached stage 16-17. (B-E) Neural plate was dissected from the injected embryos. Neural plate images from the CoMO- (B-B″) or Mrtf-MOsp (C-C″) -injected embryos at low (B,C) or high (B′,B″,C′,C″) magnification at the level of hindbrain. Midline is indicated with a white dashed line (B′,B″,C′,C″). Scale bars: 100 µm for B,C; 50 µm for B′,B″,C′,C″. (D) Quantification of F-actin intensity at the bicellular junctions (BCJs). Injected (GFP) and uninjected (Uni.) cells were scored in the neural plate at the hindbrain region, as indicated. N=numbers of junctions scored. (E) Quantification of apical domain size. N=numbers of cells scored. Kruskal–Wallis test: ****P<0.0001; n.s., not significant. The box plots indicate the median and quartiles.
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