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Maya Voichek

@mayavoichek.bsky.social
735 followers 966 following 64 posts

Studying the twilight zone between transposons and endogenous retroviruses // Scientist, mom, bioart enthusiast

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Reposted by Maya Voichek
Eirik Lågeide @eiriklag.bsky.social · 01/10/2026
Very excited to share the first preprint from my PhD with the community! This is also the first paper from the Plant Immunogenomics group with @galofir.bsky.social, so stay tuned for more! www.biorxiv.org/content/10.6... 1/n 🧵
biorxiv.org
NO VEIN is an ancestral immunity protein involved in plant-virus interaction
The conservation of immune systems from prokaryotes to eukaryotes can guide discovery of immunity genes across the tree of life. Most studies to date have focused on metazoan systems, while the extent...
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Leah Houri-Zeevi @leahhouri.bsky.social · 25/09/2026
🩸🩸🩸TODAY WE SHARE TWO MAJOR DISCOVERIES🩸🩸🩸 1. We peered into genomes and brains of the rare mosquitoes that QUIT feeding on blood and found what biting is built from 2. Humans got rid of isoleucine in their blood, malaria suffers from it, and mosquito proteomes budget for it THREADS>
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Cedric Feschotte @cedricfeschotte.bsky.social · 24/09/2026
Thrilled to see this published today! Truly special because we made the initial discovery >15 yrs ago! We found two copies of a human gene called BC200 embedded in a human poxvirus. BC200 blurs the line between gene & transposon—both functional & mutagenic! www.science.org/doi/10.1126/... 🧵1/n
science.org
Escape of the BC200 gene to a human poxvirus reveals its persistent transposition in primates
Transposable elements mobilize within and occasionally between genomes, including from host to virus. We identified two insertions of the human BC200 noncoding RNA gene in the poxvirus molluscum conta...
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Quanta Magazine @quantamagazine.org · 23/09/2026
“Jumping genes” can cut and paste themselves into new locations in the genome. But they’re more than parasites or genetic junk. www.quantamagazine.org/how-virus-li…
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Cell - a Cell Press journal @cp-cell.bsky.social · 23/09/2026
Now online! Direct cell-to-cell transmission of retrotransposons
dlvr.it
Direct cell-to-cell transmission of retrotransposons
Retrotransposons can infect neighboring cells using a mechanism that relies on a small fusogen-like protein rather than on the envelope protein that is typically required for infection.
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Maya Voichek @mayavoichek.bsky.social · 24/09/2026
Super excited to share my postdoctoral work at @imbavienna.bsky.social @viennabiocenter.bsky.social - We discovered that some retrotransposons, or "jumping genes" 🧬, are able to spread from cell to cell via a new viral infectivity route. A short thread: 🧵👇 (1/7)
AI-generated illustration of the soma-to-germline transmission of retrotransposons described in our work
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Institute of Molecular Biotechnology @imbavienna.bsky.social · 23/09/2026
Can “jumping genes” spread like viruses? New research from the Brennecke lab at IMBA shows that, in fruit flies, certain transposable elements can break out of their own cell and slip into developing eggs—securing their passage to the next generation. Published in Cell: imba.science/4jdMuYQ
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Physalia-courses@ONLINE @physaliacourses.bsky.social · 23/09/2026
The Bioinformatic analysis of TEs is almost full! If interested in TE, you cannot miss this course with such an amazing team of instructors @valentinapeona.bsky.social @ritarebollo.bsky.social & @clementgoubert.bsky.social www.physalia-courses.org/courses-work...
physalia-courses.org
Bioinformatic analysis of Transposable Elements
2nd-6th November 2026 To foster international participation, this course will be held online
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Aris Katzourakis @ariskatzourakis.bsky.social · 14/09/2026
Our paper on the enigmatic alpharetrovirus lineage in bats is out! Huge credit to @emma-harding.bsky.social, and of course all co-authors involved in helping experiment, draft, analyse and discuss. @biology.ox.ac.uk @ox.ac.uk #paleovirology journals.plos.org/plosgenetics...
journals.plos.org
An ancient alpharetrovirus lineage in bats: Evolutionary insights and possible roles in reproduction
Author summary Retroviruses are important pathogens, providing constant selective pressure and sources of genetic variability throughout vertebrate evolution. Significant evolutionary leaps have been ...
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Harmit Singh Malik @harmitmalik.bsky.social · 30/08/2026
Scientists turn mosquitoes into "flying vaccines" www.gavi.org/vaccineswork...
gavi.org
Scientists turn mosquitoes into "flying vaccines"
Researchers are investigating whether vaccine-carrying mosquitoes and edible vaccines could help reduce the spread of rabies and Nipah virus from bats to humans.
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Peter Andersen @germline.bsky.social · 29/08/2026
We watched piRNAs and transposons across development, saw them dance tightly and wrote a paper about it. It's so cool to see it online and we will make a thread about it all very soon. Stay tuned :-)
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Cell - a Cell Press journal @cp-cell.bsky.social · 03/08/2026
Now online! Co-option of retrotransposons promotes antibody diversification
dlvr.it
Co-option of retrotransposons promotes antibody diversification
A longstanding mystery in antibody diversification is how AID specifically targets immunoglobulin V genes. Ancient LINE-1 retrotransposons embedded within the immunoglobulin locus provide a recruitment platform for the HUSH complex and AID to drive somatic hypermutation.
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c0nc0rdance @c0nc0rdance.bsky.social · 01/08/2026
The headlines are still covering the cyclosporiasis outbreak from lettuce, but let's talk about a different summer, long ago. The headlines in Bavaria would have called it "summer diarrhea" & it was killing babies. Enter our hero, Professor Theodor Escherich of the Julius Hospital, Würzburg.
Signed portrait of Theodor Escherich, MD (1857-1911). Dr. Escherich was a German-Austrian pediatrician, best known for his discovery of the Escherichia coli bacterium
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Geoff Faulkner @faulknerlab.bsky.social · 30/07/2026
Our study published today @science.org shows that X-chromosome inactivation (XCI) attracts L1 mutations to the human X chromosome: doi.org/10.1126/scie... With outstanding Perspective from @aurelien-doucet.bsky.social & @retrogenomics.bsky.social: doi.org/10.1126/scie...
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Jakob Schnabl-Baumgartner @jakobschnabl.bsky.social · 17/07/2026
Cool study! TEs in the male Drosophila germline jump in bursts
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Rafael Pinilla-Redondo (Rafa) @rafomics.bsky.social · 16/07/2026
1/10 🚨Preprint! One RING to rule them all (phages)👑💍⚔️ Bacteria build giant DNA-scaffolded RNase rings (larger than the ribosome!) to shut down viral infection🧬🧵👇 biorxiv.org/content/10.6...
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Cedric Feschotte @cedricfeschotte.bsky.social · 13/07/2026
📣 Abstract submission deadline for CSHL TEs extended to July 24! Two more weeks to submit your abstract for a short talk or poster — do it! It’s gonna be a fantastic meeting!! meetings.cshl.edu/meetings.asp...
meetings.cshl.edu
Transposable Elements
Cold Spring Harbor Laboratory Meetings & Courses -- a private, non-profit institution with research programs in cancer, neuroscience, plant biology, genomics, bioinformatics.
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Sorek Lab @soreklab.bsky.social · 09/07/2026
Our paper out in Science today: The Metis defense system senses molecular byproducts released when a phage degrades the bacterial genome, and then prevents replication of the phage in the infected cell Congratulations @ostermanilya.bsky.social and co-authors!
science.org
Bacteria sense virus-induced genome degradation via methylated mononucleotides
Phages often degrade the genome of their bacterial host to individual nucleotides. Here we describe Metis, a bacterial defense system that directly senses phage-mediated host genome degradation. Metis...
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Jakob Schnabl-Baumgartner @jakobschnabl.bsky.social · 07/07/2026
www.cell.com/molecular-ce... I'm happy to see our work published! If you are interested in transposons, transcriptional regulation and Pol III come and check it out 👀 🧫 🧬
cell.com
ChAHP silences SINE retrotransposons by inhibiting TFIIIB recruitment
SINEs are short transposable elements that make up large fractions of mammalian genomes. Known to be transcribed by RNA polymerase III, their regulation has remained largely unexplored. Schnabl-Baumga...
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Vienna BioCenter Scientific Training @vbcscitraining.bsky.social · 03/07/2026
Molecular medicine in Berlin. Exchanges with NYU and the Weizmann Institute. Max Delbrück Center: cardiovascular, cancer, neuro, immunology, systems biology. Your PhD. Your city. Your move. Symposium Sept 10 → doctoralinsights.at #DocInsights #MDC
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Mikko Taipale @miketilapia.bsky.social · 30/06/2026
Our evil ORFeome paper is out! In collaboration with @alex-stark.bsky.social, we screened ~4,000 viral proteins and secreted effectors from bacteria and parasites, covering hundreds of diverse pathogens, for phenotypes in human cells.
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Jason Shepherd @jasonsynaptic.bsky.social · 29/06/2026
Very excited for our new paper, now out in @cellcellpress.bsky.social! /🧵 The protein Tau forms intracellular toxic tangles in neurons in Alzheimer’s disease and Tauopathies. Tau pathology slowly spreads from cell-to-cell but the mechanisms are not clear /1 authors.elsevier.com/sd/article/S...
authors.elsevier.com
Arc mediates intercellular tau transmission via extracellular vesicles
Tau pathology spreads cell to cell, but the mechanisms of intercellular tau transmission remain unclear. We find that the neuronal gene Arc is critica…
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Julius Brennecke @juliusbrennecke.bsky.social · 13/06/2026
a small attempt to capture this enormous loss and what Greg meant and means to so many. www.cell.com/cell/fulltex...
cell.com
Gregory J. Hannon (1964–2026)
Gregory J. Hannon passed away in April 2026 at the age of 61. A towering figure in modern molecular biology, Greg influenced remarkably diverse areas of science. His work reshaped our understanding of...
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Marion Clavel @thevirusmc.bsky.social · 29/05/2026
Our work is out now! (www.science.org/doi/10.1126/...). We discover a selective autophagy pathway that protects plants from the mess caused by RNA viruses. Intrigued? Follow the spaghetti trail for a summary of our findings🧵-->
science.org
Selective autophagy fine-tunes plant immunity to promote cell survival during viral infection
RNA viruses co-opt host endomembranes to form replication complexes, often triggering cellular stress and immune responses. Here, we show that Arabidopsis thaliana activates selective autophagy to res...
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Cedric Feschotte @cedricfeschotte.bsky.social · 29/05/2026
📣 POSTDOC position available in the Feschotte Lab at Cornell to work on #TRANSPOSONS! More details below. Pls send informal application or inquiry ASAP by DM or email to cf458_at_cornell.edu. Pls spread the word 🙏 #TEsky www.thefeschottelabatcornell.com
thefeschottelabatcornell.com
The Feschotte Lab at Cornell
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Osterman Ilya @ostermanilya.bsky.social · 28/05/2026
🚨After 4 fantastic years in the Sorek lab @soreklab.bsky.social, I’ll be starting my own group at EMBL @embl.org bl.org Hamburg. www.embl.org/groups/oster... Metabolism-driven immunity: phages, metabolites, and discovery of new enzymes, molecules, and pathways 🦠🧬
embl.org
Osterman Group – Metabolism-driven immunity
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Superbugs 🦠🔬🏫🧒🏽 @superbugs.bsky.social · 23/05/2026
With hantavirus, Ebola and meningitis making recent headlines, here's an interactive timeline to explore devastating infections throughout history and the scientific and medical advances to fight and prevent them. www.superbugs.online/timeline 🦠 🧫 🔬 💊 🏥
superbugs.online
Timeline 'R' Us — Superbugs - The microbial world in, on and around us
Of superbugs and superheroes. Timeline 'R' Us – Explore devastating infections through the ages, alongside crucial scientific discoveries to help control them.
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Victoria Deneke @vdeneke.bsky.social · 22/05/2026
How do sperm and egg fuse? Surprisingly, we still don’t fully know… Our field has uncovered many pieces of the fertilization puzzle, but not how they fit together. We identify ✨ SPARK ✨ - a conserved sperm complex that couples sperm-egg binding to fusion. tinyurl.com/34cm4xat Read on! 🧵👇
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The EMBO Journal @embojournal.org · 18/05/2026
Host-transposable element coexistence: a matter of resistance, tolerance and trade-off Read this new review by Séverine Chambeyron, Charlotte Grimaud, Mikiko Siomi et al link.springer.com/article/10.1...
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Alejandro Burga @arburga.bsky.social · 18/05/2026
🧬 New research from the Burga lab! We took a closer look at a rogue selfish protein and caught evolution in the act of turning something old into something radically new 💡 (a.k.a. neofunctionalization) @imbavienna.bsky.social www.biorxiv.org/content/10.6... Curious? Here’s a breakdown:
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Cedric Feschotte @cedricfeschotte.bsky.social · 07/05/2026
👋 Transposon lovers: registration is now open for the CSHL TE meeting! We have a 🔥 lineup of invited speakers and many slots for short talks selected upon abstract across all areas of TE biology. 🧬➰🧬 #TEsky Abstract deadline: July 10 meetings.cshl.edu/meetings.asp...
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Kenneth Loi @kenjmloi.bsky.social · 27/04/2026
Excited to share our discovery of a new programmable RNA-guided DNA-targeting system hiding inside bacteriophages that predates CRISPR. We call it VIPR (Viral Interference Programmable Repeat), and it uses an entirely new logic to find its targets. Thread + link below.
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Bohdana Hurieva🇺🇦 @bhurieva.bsky.social · 23/04/2026
🎉Excited to share our new preprint! TIR domains from diverse animals, including human TLR4, are catalytically active and produce cyclic ADP-ribose (cADPR). This enzymatic activity is widespread in animals and conserved across the tree of life. www.biorxiv.org/content/10.6...
biorxiv.org
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Quanta Magazine @quantamagazine.org · 15/04/2026
Over two billion years, a fierce battle has raged between bacteria and the viruses that infect them. The resulting evolution has shaped the way our bodies fight disease today. @vcallier.bsky.social reports: www.quantamagazine.org/the-ancient-...
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Emilie Brasset @emiliebrasset.bsky.social · 09/04/2026
Love Drosophila genetics — this journal club was a great way to share that enthusiasm and pay tribute to the pioneers of transposons regulation 🪰 How classical genetics uncovered key determinants of TE silencing #transposon @igred.fr @igred.fr 👇👇
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Peter Andersen @germline.bsky.social · 01/04/2026
Germ cells have their own versions of core transcription factors and fertility depends on them. We're hiring a PhD student to figure out how! 📢 Fly genetics + proteomics + genomics. Fully funded. Aarhus University 🇩🇰 Deadline May 1 👇 Please share with anyone who might be interested!
phd.nat.au.dk
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Sorek Lab @soreklab.bsky.social · 07/04/2026
Our current understanding of the Metis defense system - carved in wood By @naamalila.bsky.social www.biorxiv.org/content/10.1...
Would carving of the mechanism of Metis antiphage defense
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Aude Bernheim @audeber.bsky.social · 02/04/2026
How diverse is bacterial immunity ? We report in @science.org how language models allowed us to predict 2.4M antiphage proteins spanning >23K novel potential systems. 👏 @emordret.bsky.social, @alexhv.bsky.social & al doi.org/10.1126/scie... Explore them here defensefinder.mdmlab.fr/wiki/refseq_...
science.org
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José R Penadés @jrpenades.bsky.social · 31/03/2026
This paper started as an idea @albertomarina.bsky.social had many years ago… which of course means he was right all along 😄. Some of us just needed a few years (and a lot of experiments) to catch up. Grateful (and slightly humbled) to be part of this. Thanks Alberto! www.cell.com/cell/fulltex...
cell.com
Phages communicate across species to shape microbial ecosystems
Gallego-del-Sol et al. show that arbitrium-coding phages can sense non-cognate peptide signals from other phages to regulate lysis-lysogeny decisions. This crosstalk affects lysis-lysogeny outcomes of...
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IMP @impvienna.bsky.social · 19/03/2026
Securing two group leader positions at the same institute is no small feat.  From IMP postdocs to group leaders: Laura Lorenzo-Orts and Ulrich Hohmann started their labs at IMB Mainz this year:
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Julien Colombani & Ditte Andersen lab @colombani-lab.bsky.social · 24/02/2026
Join us for a day of talks, posters, and discussions, featuring a morning joint lecture with Nobel Laureates Eric F. Wieschaus and Christiane Nüsslein-Volhard! Date: Monday, May 4th, 2026 Location: University of Copenhagen, Mærsk Tower sites.google.com/view/emergin... Free to participate
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Julius Brennecke @juliusbrennecke.bsky.social · 13/02/2026
The demystification of piRNA clusters if you wonder how cells generate piRNAs specifically against transposons & you are looking for a weekend read check out @86dominik.bsky.social's opus magna (or Dominik's great thread) a shared project with the one and only Rippei Hayashi, lab alumnus & friend
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Dominik Handler @86dominik.bsky.social · 13/02/2026
How does the piRNA pathway solve the self vs. non-self problem? 🧬 Since piRNAs come from single-stranded RNA, how does the cell choose the right ones? For years, "piRNA clusters" were seen as THE privileged source. But are they really special and earmarked for biogenesis? (1/19)
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Jackson Ridges @jacksonridges.bsky.social · 11/01/2026
Check out our new paper in early access at Nature Communications! www.nature.com/articles/s41...
nature.com
Client Challenge
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Maya Voichek @mayavoichek.bsky.social · 11/01/2026
The (Yoav) Voichek lab has opened its gates at the Weizmann Institute, and is actively recruiting students and researchers at all levels - come explore gene regulation and computational genomics in a fun, friendly sprouting lab 🤗🥼⚗️🧪 www.weizmann.ac.il/plants/voichek
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Julius Brennecke @juliusbrennecke.bsky.social · 22/12/2025
Intrigued by a long-standing conundrum in small RNA biology—how nuclear Argonaute proteins silence transposons when they *need* target transcription for their own recruitment—we studied the piRNA pathway. And found a hidden RNA-decay axis from Piwi to the RNA exosome.
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Ulrich Hohmann @hohmannulrich.bsky.social · 19/11/2025
Lastly, I’m excited to join @imbmainz.bsky.social in 2026 to start my own lab. We'll explore new mechanisms in eukaryotic gene expression, leveraging ‘evolutionary play’ to uncover how regulation, repurposing, and hijacking shape RNA biology. tinyurl.com/y4x29ctt Thanks for reading! 20/20
tinyurl.com
Research
IMB Mainz
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Harmit Singh Malik @harmitmalik.bsky.social · 12/11/2025
Are you an early-stage graduate student (2nd or 3rd year) or early-stage postdoc based in the US or Canada, working primarily in Drosophila? Would you like to help improve the experience of all trainees working in Drosophila research? If so, read on. (Please repost to reach a broad audience.)
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Julius Brennecke @juliusbrennecke.bsky.social · 07/11/2025
Some impressions from the rather fabulous #EMBOmobilegenome Mobile Genome meeting in Heidelberg Morning walk through the woods, exciting panel discussion, flash talks, lab community, drosophila friends, … @events.embl.org The transposon community is going very strong. see you all again in 2027!!
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Dominik Handler @86dominik.bsky.social · 14/10/2025
When transposons jump, genomes diverge - even in cultured cells. I am happy to share our new preprint: a chromosome-scale genome assembly for Drosophila OSC cells, one of the key model systems in the piRNA field, especially for nuclear piRNA biology. 🧬🧵 (1/12)
Graphical abstract: The Drosophila OSC Genome as a resource for transposon and piRNA biology. The figure illustrates the workflow and key findings. Left: De novo genome assembly using Oxford Nanopore Technologies (ONT) long reads and Hi-C data generates a phased assembly distinguishing unique (blue) and repetitive (orange) sequences. Dot plot comparison between OSC-r1.01 and dm6 reference genomes shows overall synteny with extensive structural variation. Middle: A freely accessible UCSC genome browser session displays multi-omics data tracks including gene models, transposon insertions, chromatin accessibility, transcription, small RNAs, and histone modifications. Right: New insights into flamenco piRNA cluster biology reveal >730 kb transcribed from a single promoter without major splicing. Tethering assays demonstrate long-range silencing effects across the locus, and genome browser tracks show coordinated regulation of piRNA production, transcription, and chromatin state. This resource enables comprehensive studies of transposon regulation and piRNA pathway function in a widely-used Drosophila cell line.
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