Reposted by Doudna LabKenneth Loi @kenjmloi.bsky.social · 18/09/2026VIPR is now out in Science! What started with a mysterious RNA led us to an unexpected way of recognizing DNA, as well as some clues to CRISPR’s origins. So happy to share these two papers with an incredible team. Links below; original discovery thread here ↓ 25619
Reposted by Doudna LabKenneth Loi @kenjmloi.bsky.social · 18/09/2026Pretty surreal to see our work in The New York Times. Thank you, Carl Zimmer, for sharing the story of VIPR! www.nytimes.com/2026/09/17/s...nytimes.comThe Next Gene-Editing Technology May Also Be the Oldest (Gift Article)Scientists have discovered a powerful gene-targeting system in viruses. Billions of years old, VIPR seems to predate CRISPR and may be even more effective. 0153
Doudna Lab @doudna-lab.bsky.social · 19/09/2026Out now in Science: Two papers from our lab reveal VIPR, an RNA-guided DNA-targeting system in bacteriophages, providing clues to the origins of CRISPR www.science.org/doi/10.1126/... www.science.org/doi/10.1126/... Congrats to Peter Yoon, @kenjmloi.bsky.social @terryzzy.bsky.social, T.Docter & teamscience.orgA noncontiguous code for RNA-guided DNA recognition at the origin of CRISPR-CasCRISPR-Cas provides RNA-mediated adaptive immunity, but how its first RNA-guided effector arose is unclear. In this study, we report the discovery of Viral Interference Programmable Repeat (VIPR) syst... 217569
Reposted by Doudna LabConner Langeberg @clangeberg.bsky.social · 05/09/2026RNA structure prediction lags behind proteins for lack of data. RNASSTR, our new dataset, offers millions of RNA sequence-secondary structure pairs, split structurally to avoid train/test leakage. 📄 doi.org/10.1261/rna.... 📰 innovativegenomics.org/news/ai-mode...doi.org 11410
Reposted by Doudna LabErin Doherty @erinedoherty.bsky.social · 31/08/2026I'm very excited to share that this January, I’ll be joining Columbia University’s Department of Biological Sciences as a tenure-track Assistant Professor 🏙️🦁🍎 @columbiauniversity.bsky.social 🧬 Learn more: dohertylab.org Thank you to all those who supported me along the way!dohertylab.orgDoherty lab at Columbia University | immune signaling | Sherman Fairchild Center, 1212 Amsterdam Ave, New York, NY 10027, USAWe treat viral antagonism as a discovery tool for host biology to reveal fundamental mechanisms of immune signaling and new opportunities for therapeutic intervention. 26312
Reposted by Doudna LabNature Biotechnology @natbiotech.nature.com · 31/07/2026Research Highlight: An RNA-guided ‘chromatin shredder’ for selective cell killing www.nature.com/articles/s41...nature.comAn RNA-guided ‘chromatin shredder’ for selective cell killing - Nature BiotechnologyNature Biotechnology - An RNA-guided ‘chromatin shredder’ for selective cell killing 0101
Reposted by Doudna LabEvan DeTurk @evandeturk.bsky.social · 20/08/2026Finally managed to get my hands on a physical copy of this! Great to see in our paper literally in print 081
Doudna Lab @doudna-lab.bsky.social · 06/08/2026The latest work from the lab now out in @cp-molcell.bsky.social! New mechanistic insights into TnpB DNA unwinding and hypercompact plant genome editors🌱 Congratulations to leads @zehanzhou.bsky.social, Iren Saffarian, @honglue.bsky.social, Trevor Weiss & team, and Jacobsen, Savage and Bryant labs 0257
Reposted by Doudna LabNature @nature.com · 17/07/2026Scientists have harnessed AI models to create synthetic CRISPR proteins that edit the genome more efficiently than those seen in nature go.nature.com/4f8AN3ngo.nature.comCRISPR gets a power boost from AI-designed ‘molecular scissors’Researchers used artificial intelligence to design functional CRISPR enzymes not seen in nature. 13715
Reposted by Doudna LabScience Magazine @science.org · 22/07/2026In a new Science study, researchers report the design of synthetic RNA-guided nucleases that match or exceed the activity of natural enzymes, revealing how structure-guided design can generate functional genome-editing proteins with substantially different sequences. scim.ag/45fbSFf scim.agStructure and evolution-guided design of minimal RNA-guided nucleasesThe design of RNA-guided nucleases with properties not limited by evolution can expand programmable genome-editing capabilities. However, generating diverse multidomain proteins with robust enzymatic ... 0307
Doudna Lab @doudna-lab.bsky.social · 22/07/2026First preprint from the lab of postdoc alumni @jnoms.bsky.social. Check it out! 070
Reposted by Doudna LabJason Nomburg @jnoms.bsky.social · 22/07/2026Happy to share the first preprint out of the Nomburg lab! Many aspects of cellular immunity are shared across the tree of life. Here, we show that some of these conserved aspects of cellular immunity are mirrored by conserved effectors of immune antagonism. Thread below! 1/15 38249
Reposted by Doudna LabBel Esain @isabelesain.bsky.social · 17/07/2026So excited to see our paper out in Science! Beyond grateful to my co-leads @petrskopintsev.bsky.social @evandeturk.bsky.social, all co-authors & collaborators, everyone in Doudna lab, and @innovativegenomics.bsky.social Being EsAIn in the DouDNA lab, it couldn't have been any other way ✨ 0103
Reposted by Doudna LabPetr Skopintsev @petrskopintsev.bsky.social · 17/07/2026Proud to present our work, published today in @science.org! My deepest gratitude to @isabelesain.bsky.social, @evandeturk.bsky.social, Jennifer and our collaborators in the Doudna, Cate, Banfield, and Jacobsen labs, and the @innovativegenomics.bsky.social! I hope you enjoy reading it! ✨ 04310
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 16/07/2026Out today in @science.org, Doudna lab researchers describe an #AI-assisted method for designing enhanced genome editors, testing close to 2000 in lab. Read more: innovativegenomics.org/news/ai-desi...innovativegenomics.orgAI-Assisted Technique Allows Scientists to Design New, Functional Genome Editors Beyond What Can Be Found in NatureAI-Assisted Technique Allows Scientists to Design New, Functional Genome Editors Beyond What Can Be Found in Nature - Innovative Genomics Institute (IGI) 1135
Doudna Lab @doudna-lab.bsky.social · 16/07/2026Our AI-guided design of RNA-guided nucleases is now out in @science.org 💻🧬 We used structure and evolutionary data to generate minimal, active and divergent gene editors! www.science.org/doi/10.1126/... Congrats to @petrskopintsev.bsky.social @isabelesain.bsky.social @evandeturk.bsky.social & team!science.orgStructure and evolution-guided design of minimal RNA-guided nucleasesThe design of RNA-guided nucleases with properties not limited by evolution can expand programmable genome-editing capabilities. However, generating diverse multidomain proteins with robust enzymatic ... 212841
Reposted by Doudna LabWaggoner Lab @labwaggoner.bsky.social · 08/06/2026Targeting Cancer-Specific Mutations with RNA-Triggered Chromatin Shredding @nature.com @doudna-lab.bsky.social @gladstoneinst.bsky.social @jingkunzeng.bsky.social www.nature.com/articles/s41... 0153
Reposted by Doudna LabGladstone Institutes @gladstoneinst.bsky.social · 10/06/2026A team led by Jennifer Doudna developed an innovative chromatin-shredding technique shown to destroy cancer cells carrying a prevalent mutation while keeping healthy cells intact. @doudna-lab.bsky.social @innovativegenomics.bsky.social @ucsanfrancisco.bsky.social @ucberkeleyofficial.bsky.social gladstone.orgNew CRISPR Technique Selectively Shreds Cancer Cells, Including Those of ‘Undruggable’ CancersAn innovative chromatin-shredding technique shown to destroy cancer cells carrying a prevalent mutation while keeping healthy cells intact. 073
Doudna Lab @doudna-lab.bsky.social · 24/06/2026Huge congratulations to Doudna Lab postdoc, Santiago! 052
Doudna Lab @doudna-lab.bsky.social · 09/06/2026We now present our latest work, now out in @nature.com! A creative new CRISPR-based approach can selectively destroy cells carrying undruggable mutations in cancer. Work led by @jingkunzeng.bsky.social In collaboration with Alan Ashworth, Yang Liu and Ryan Jackson. www.nature.com/articles/s41...nature.comTargeting Cancer-Specific Mutations with RNA-Triggered Chromatin Shredding - NatureNature - Targeting Cancer-Specific Mutations with RNA-Triggered Chromatin Shredding 05914
Doudna Lab @doudna-lab.bsky.social · 12/05/2026New pre-print 📣 “Undruggable” cancer mutations remain very hard to target with current modalities. What if we could instead sense mutant transcripts and convert that recognition into selective cell killing? Check out this work led by postdoc Jingkun Zeng: www.biorxiv.org/content/10.6...biorxiv.org 14117
Reposted by Doudna LabCress Lab @cresslab.bsky.social · 30/04/2026Our lab is proud to present our latest work harnessing Bridge Recombinase for genome-scale editing in diverse bacteria, microbiome editing, and programmable horizontal gene transfer. 69851
Doudna Lab @doudna-lab.bsky.social · 27/04/2026We present VIPR, a phage-encoded RNA-guided system that recognizes DNA with a noncontiguous code unlike CRISPR. Tiny, programmable, possibly ancestral to CRISPR immunity; VIPR is built around a striking RNA-DNA-DNA triplex. 116050
Reposted by Doudna LabFletcher Lab @fletcherlabucb.bsky.social · 02/04/2026In our new work published in @natbiomedeng.nature.com in collaboration with @theottlab.bsky.social and @doudna-lab.bsky.social, we introduce "interfering" guide RNAs (igRNA) for CRISPR-Cas13a that regulate enzyme activity after activation. Congrats to all the authors! www.nature.com/articles/s41...nature.comProgrammable kinetic barcoding for multiplexed RNA detection with Cas13a - Nature Biomedical EngineeringA multiplexed RNA detection method exploits crRNA-dependent variability in Cas13a activity on RNA targets for kinetic barcoding and can be used to distinguish among SARS-CoV-2 variants in clinical sam... 084
Reposted by Doudna LabMichael Le Page @mjflepage.bsky.social · 12/02/2026A big challenge for CRISPR gene editing 🧬 is altering a high enough proportion of target cells in the body 🧪 So @doudna-lab.bsky.social have developed editors that can amplify themselves by spreading from cell to cell Comment from @gaetanburgio.bsky.social www.newscientist.com/article/2514...newscientist.comGene editing that spreads within the body could cure more diseasesThe idea of self-amplifying gene editing is to get cells to pass on packages of CRISPR machinery to their neighbours, boosting the effect 1166
Reposted by Doudna LabThe Kavli Prize @kavliprize.bsky.social · 04/03/2026Congratulations to Jennifer Doudna, 2018 #KavliPrize Nanoscience Laureate and CRISPR pioneer, for her recent election to the National Academy of Engineering! She's now one of a few people elected to all three academies @nationalacademies.org. Learn more: bit.ly/4s4k98m @doudna-lab.bsky.socialbit.lyFive UC Berkeley faculty elected to National Academy of Engineering - Berkeley NewsA chemical engineer, an electrical engineer, a biochemist, a roboticist and a laser dynamicist are among the new members. 022
Reposted by Doudna LabUC Berkeley MCB @berkeleymcb.bsky.social · 12/03/2026Today’s the day to make a BIG impact for the MCB community! 🌟 MCB faculty share—in their own words—why our initiatives matter. @doudna-lab.bsky.social @hariharanlab.bsky.social ✅ Read about our goals bit.ly/BigGiveMCB26goals ✅ Click 🔗 bit.ly/BigGiveMCB26 to donate 011
Doudna Lab @doudna-lab.bsky.social · 27/01/2026🚀 New preprint! @jacobsenucla.bsky.social x @doudna-lab.bsky.social collaboration: High-activity TnpB (Ymu1-WFR) + a multi-gRNA system in TRV enables heritable, tissue-culture-free multiplex editing in plants. Big potential for plant biotech 🧬🌾🌱 doi.org/10.64898/202...doi.org 0157
Reposted by Doudna LabZehan Zhou @zehanzhou.bsky.social · 15/01/2026How do the ancestors of CRISPR-Cas unwind DNA and how can this lead to better genome editing? With our collaboration between @doudna-lab.bsky.social x @jacobsenucla.bsky.social x Zev Bryant's lab x @savagecatsonly.bsky.social we've uncovered the secrets behind TnpB's dynamics!biorxiv.org 1179
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 13/01/2026Check out the latest episode of Rewriting the Code, featuring Jennifer Doudna and #SickleCell patient pioneer Victoria Gray who was cured with a #CRISPR-based treatment in a groundbreaking clinical trial: ow.ly/t6FY50XVNO7 053
Reposted by Doudna LabNature Biotechnology @natbiotech.nature.com · 12/01/2026Targeted delivery of genome editors in vivo - @doudna-lab.bsky.social @innovativegenomics.bsky.social go.nature.com/4qKp6Tb 0147
Doudna Lab @doudna-lab.bsky.social · 10/01/2026New preprint 👉Doudna x Bryant x Jacobsen x Savage collaboration! Work led by @zehanzhou.bsky.social, I. Saffarian-Deemyad, @honglue.bsky.social, T. Weiss We dissect how stepwise DNA unwinding gates TnpB genome editing, revealing how unwound DNA states enhance cleavage www.biorxiv.org/content/10.6...biorxiv.orgStepwise DNA unwinding gates TnpB genome-editing activityTnpB is a compact RNA-guided endonuclease and evolutionary ancestor of CRISPR-Cas12 that offers a promising platform for genome engineering. However, the genome-editing activity of TnpBs remains limit... 02611
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 05/01/2026New in Science Magazine Science Advances from the Doudna Lab, Rubin Lab and Cress Lab —Identification of proteins influencing #CRISPR-associated #transposases for enhanced #GenomeEditing. Read here: ow.ly/U0s450XS82n 0137
Reposted by Doudna LabAmanda Alker @atp-alker.bsky.social · 05/01/2026During my postdoc in @therubinlab.bsky.social, @leosong.bsky.social and I aimed to make CRISPR-associated transposons more efficient for editing bacteria. Couldn’t have done it w/o a CAST of characters at IGI and beyond @innovativegenomics.bsky.social, @cresslab.bsky.social, @doudna-lab.bsky.social 12511
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 16/12/2025🎺New paper alert🎺 Out now in Nature Chemical Biology from IGI's Jennifer Doudna (Doudna Lab) and collaborators: Temporal photoproximity labeling of ligand-activated EGFR neighborhoods using MultiMap Read here: ow.ly/izGo50XAkog ow.lyTemporal photoproximity labeling of ligand-activated EGFR neighborhoods using MultiMap - Nature Chemical BiologyA multiscale photoproximity labeling proteomics workflow captures dynamic neighborhoods of extracellular and intracellular epidermal growth factor (EGF) receptor interactomes during early, middle and late signaling upon activation by EGF. 022
Reposted by Doudna LabEvan DeTurk @evandeturk.bsky.social · 09/12/2025Excited to share our work designing genome editors with machine learning! 🧬💻 Huge thanks to @petrskopintsev.bsky.social @isabelesain.bsky.social @doudna-lab.bsky.social and all co-authors. Check out the thread for a summary of what we found 👇 0133
Reposted by Doudna LabErin Doherty @erinedoherty.bsky.social · 10/12/2025A very nice Preview of our work in @cp-cellhostmicrobe.bsky.social this morning from Chrishan Fernando & Nicole D. Marino! www.cell.com/cell-host-mi...cell.comViral enzymes degrade to evadeAcross all domains of life, immune systems rely on nucleotide-based signaling molecules to activate defense responses. In a recent Cell Host & Microbe study, Doherty, Nomburg, and colleagues identify ... 02911
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 10/12/2025Congrats to IGI's Jill Banfield, Jennifer Doudna, Mary Firestone, Patrick Hsu, Alex Marson, Kris Niyogi, Eva Nogales, Dan Nomura, and Jennifer Puck — each is on Clarivate's Highly Cited Researchers 2025 list for ranking in the top 1% in their field by citations! 062
Reposted by Doudna LabPetr Skopintsev @petrskopintsev.bsky.social · 09/12/2025Excited to share our first work on protein design! Huge thanks to the entire team, and especially to Bel, Evan, to the Doudna, Jacobsen, Cate, Banfield labs, all co-authors, and my D-lab mates! 💫 0268
Reposted by Doudna LabBel Esain @isabelesain.bsky.social · 09/12/2025First co-led work from the Doudna lab 🤜🤛 We designed minimal RNA-guided nucleases with AI, and even did Cryo-EM during an earthquake (!) Huge honor working with @petrskopintsev.bsky.social, @evandeturk.bsky.social, Jennifer Doudna and co-authors, everyone at D-Lab and @innovativegenomics.bsky.social 0204
Doudna Lab @doudna-lab.bsky.social · 09/12/2025✨New preprint! 🧵1/4 Excited to share our work on AI-guided design of minimal RNA-guided nucleases. Amazing work by @petrskopintsev.bsky.social @isabelesain.bsky.social @evandeturk.bsky.social et al! Multi-lab collaboration @banfieldlab.bsky.social @jhdcate.bsky.social @jacobsenucla.bsky.social🧬 🔗👇 110248
Reposted by Doudna LabIndigo V. L. Rose @ivlrose.bsky.social · 06/12/2025Career update: I'm happy to say that I've accepted a postdoc position at UC Berkeley at @innovativegenomics.bsky.social in Jennifer Doudna's lab! I'm looking forward to this exciting new chapter of my scientific career! 3321
Reposted by Doudna LabRubin Lab @therubinlab.bsky.social · 02/12/2025We're excited to share our lab's first lead paper! We developed OriGen, a language model trained to generate plasmid origins of replication. 🔄🦠 The model generates sequences that are significantly different from wild type origins and, remarkably, they allow for replication in vivo. Read it here ⬇️academic.oup.comValidate User 1137
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 25/11/20251/2 New from co-first authors @erinedoherty.bsky.social and @jnoms.bsky.social of the @doudna-lab.bsky.social — Bacteria fight off viruses using tiny molecular “alarm signals” made of nucleotides. To survive, viruses must find ways to shut these signals down.innovativegenomics.orgNew Method Uncovers How Viruses Evade Immune Responses — and How We Might Fight BackExplore how viruses evade immune responses by developing enzymes that disrupt molecular alarm signals in host cells. 182
Reposted by Doudna LabJason Nomburg @jnoms.bsky.social · 20/10/2025My lab is hiring postdocs! We combine AI, protein structure prediction and comparison, and high-throughput virology to study the virus-host conflict. You can read more about my lab's research here: jasonnomburg.com/research/ Apply here to join us in lovely Vienna! aithyra.onlyfy.jobs/job/0khkxp82 1159
Reposted by Doudna LabJason Nomburg @jnoms.bsky.social · 25/11/2025So happy to see this work out! Was such a pleasure to co-lead this effort with Erin. Do you like viral immune evasion, and using protein structure to study immune antagonists? Give it a read! 0178
Reposted by Doudna LabErin Doherty @erinedoherty.bsky.social · 25/11/2025Work I co-led with @jnoms.bsky.social is now online at @cp-cellhostmicrobe.bsky.social ! We revealed a previously unrealized diversity of viral immune-evasion proteins that selectively destroy different cyclic nucleotide signals used in bacterial immunity. www.sciencedirect.com/science/arti...sciencedirect.comDivergent viral phosphodiesterases for immune signaling evasionCyclic dinucleotides (CDNs) and other short oligonucleotides play fundamental roles in immune system activation in organisms ranging from bacteria to … 15121
Doudna Lab @doudna-lab.bsky.social · 25/11/2025Now online at @cp-cellhostmicrobe.bsky.social from co-first authors @erinedoherty.bsky.social & @jnoms.bsky.social 0102
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 18/11/2025New in Science Magazine from the Doudna Lab and first author Owen Tuck: Recurrent acquisition of nuclease-protease pairs in antiviral immunity. Read here: ow.ly/pIWQ50XtEtM ow.lyRecurrent acquisition of nuclease-protease pairs in antiviral immunityAntiviral immune systems diversify by integrating new genes into existing pathways, creating new mechanisms of viral resistance. We identified genes encoding a predicted nuclease paired with a trypsin-like protease repeatedly acquired by multiple, ... 0123
Reposted by Doudna LabInnovative Genomics Institute @innovativegenomics.bsky.social · 14/11/2025New from the @doudna-lab.bsky.social and first author @owentuck.bsky.social! 073