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Roux Lab, Geneva

@rouxlab.bsky.social
3.3K followers 818 following 30 posts

A mix of physics and biology, understanding shapes in biology, from molecules to tissues. www.orelrouxlab.org

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Claire Dessalles @clairedessalles.bsky.social · 23/09/2026
We are also very excited to present the first 'in curvo' nematics of each actin layer in the same Hydra ! 🤩 Amazing work by NeMo's dad @kandreadis.bsky.social and the fantastic imaging by @oriolmb.bsky.social from the @rouxlab.bsky.social, to illustrate the possible use of NeMo.
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Claire Dessalles @clairedessalles.bsky.social · 23/09/2026
NeMo is finally out! 🐟 We present our new method to peel cellular layers and extract their nematics. If you're wondering what a fish has to do with curved nematics, check out the thread and the publication 👀👇🏼 arxiv.org/html/2609.12...
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Roux Lab, Geneva @rouxlab.bsky.social · 11/08/2026
Fantastic collaboration with the Kaksonen lab, amazing work from Anne-Laure Boinet with some truly surprising result! Congrats to all contributors!
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Roux Lab, Geneva @rouxlab.bsky.social · 12/05/2026
@mhakala.bsky.social shows that HRS forms bidimensional condensates onto endosomal membranes to flatten clathrin/ESCRT-0, an observation unexplained since the 2000s. Thx to Kukulski lab, @stefvass.bsky.social @colomlab.bsky.social @kaksonen.bsky.social @mishakudryashev.bsky.social rdcu.be/fihKk
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Roux Lab, Geneva @rouxlab.bsky.social · 23/04/2026
Congrats to Nicolas, Mathieu ad Claire for this important achievement. This will help the community tremendously!
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Juanma García-Arcos @juanmagararc.bsky.social · 18/02/2026
New method paper out today on FLIM analysis with Flipper-TR. We discuss fitting strategies, common pitfalls, and quantitative interpretation for measurements. First corresponding/last authorship for me! Free link: authors.elsevier.com/a/1me2hHRzCb... Thanks to @rouxlab.bsky.social and Tithi Mandal!
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Association of Postdoc at University of Geneva @apdu-unige.bsky.social · 19/02/2026
This monday we had our monthly Sciences Club. Here Cesar Bernat is showing his work on CHMP1A in mammalian cells in the @rouxlab.bsky.social ! #postdoclife
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Philipp Radler @radler92.bsky.social · 19/02/2026
I am super happy and honored to see some of my movies making it into the NYT. I hope everybody enjoys watching them go as much as I do!
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Roux Lab, Geneva @rouxlab.bsky.social · 08/02/2026
So grateful to @epimechfc.bsky.social for citing our work! It’s a classic from the lab, forever thanks to @colomlab.bsky.social
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Roux Lab, Geneva @rouxlab.bsky.social · 08/02/2026
thanks for showing this movie! The gradients of tension reorient while migrating cells change directions.
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Roux Lab, Geneva @rouxlab.bsky.social · 06/02/2026
All what you want to know about flipper probes without daring asking
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Juanma García-Arcos @juanmagararc.bsky.social · 06/02/2026
Exhaustive guide about Flipper TR FLIM analysis we made with Tithi Mandal and @rouxlab.bsky.social very soon in the methods in Enzymology series edited by @jeremybaskin.bsky.social
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Roux Lab, Geneva @rouxlab.bsky.social · 05/02/2026
You should also read Juanma’s paper, which visualizes membrane tension gradients in migrating and non-migrating cells! rdcu.be/e2u20 It also shows that flipper truly reports tension, but that response varies with lipid composition.
rdcu.be
Adherent cells sustain membrane tension gradients independently of migration
Nature Communications - This study shows that adherent cells maintain membrane tension gradients even without moving. Using a fluorescent probe, the authors reveal that actin and adhesion forces...
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epithelial mechanics fan club @epimechfc.bsky.social · 03/02/2026
Roffay, C., Molinard, G., ..., & Roux, A. (2021). Passive coupling of membrane tension and cell volume during active response of cells to osmosis. Proceedings of the National Academy of Sciences of the United States of America, 118(47), e2103228118. #EpithelialMechanics buff.ly/r1Hj7F6
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Roux Lab, Geneva @rouxlab.bsky.social · 20/01/2026
Guillaume Pernollet shows that epithelial cells adjust their shape to locally flatten, forming scutoids for any geometry, changing our view of cell packing. Thanks to all! @clairedessalles.bsky.social @juanmagararc.bsky.social @sciencesunige.bsky.social www.biorxiv.org/content/10.6...
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Roux Lab, Geneva @rouxlab.bsky.social · 20/01/2026
@marineluciano.bsky.social recreates intestinal Villi geometry by growing epithelial cells on wavy rolling substrates. Unexpected intrication of curvature effects is observed. Thanks to all! @caterinatomba.bsky.social @sgabriele.bsky.social @sciencesunige.bsky.social www.biorxiv.org/content/10.6...
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Franze Lab @franzelab.bsky.social · 19/01/2026
Paper alert: Our study led by @evapillai.bsky.social and @sudimukherjee.bsky.social showing that mechanical properties of the #brain actively shape the molecular landscape during development and #axonpathfinding is finally out! www.nature.com/articles/s41... @pdncambridge.bsky.social @fau.de @MPZPM
nature.com
Long-range chemical signalling in vivo is regulated by mechanical signals - Nature Materials
Tissue stiffness mediated by Piezo1 is shown to regulate the expression of diffusive guidance cues in the developing Xenopus laevis brain, revealing a crosstalk between mechanical signals and long-ran...
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Joshua Tran @joshuatran.bsky.social · 17/01/2026
A great start to 2026! It was a pleasure to present my work on membrane asymmetry in the @rouxlab.bsky.social at the Geneva Chemistry and Biochemistry Days. It was also an honor to receive the Best Oral Presentation in Life Science!
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Roux Lab, Geneva @rouxlab.bsky.social · 16/01/2026
A fantastic opportunity to work in Geneva if you are in the field of origins of life!
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David Drubin @drubin.bsky.social · 02/12/2025
Today, our animation synthesizing decades of research on actin-mediated endocytosis in budding yeast was published: journals.biologists.com/jcs/article/... The result of a fantastic Iwasa-Drubin lab collaboration. @margotriggi.bsky.social @jiwasa.bsky.social movie.biologists.com/video/10.124...
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Mathieu M.J.E. Rebeaud @chercheurjuteux.com · 01/12/2025
Un très grand plaisir d'avoir pu enfin (après 5 ans) voir @elisabethbik.bsky.social en face à face à l'UNIL. Elle y donne en plus un séminaire aujourd'hui.
Photo de moi et Élisabeth
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
All credits to the dreamteam that made this possible! what a pleasure and honor working with these people! 🥰 @diorgeps.bsky.social @mhakala.bsky.social @juanmagararc.bsky.social @joshuatran.bsky.social @mudgal17.bsky.social @Carlos Marcuello @Andrea Merino
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
The crucial test: We fused Heimdall Hofund to a fission-defective yeast ESCRT-III protein (Did2). This chimera restored Mup1 trafficking to vacuoles back to wt! A short amphipathic helix, present in Asgard and retained as fragments in eukaryotes, acts as a minimal membrane fission trigger!
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
Eukaryotic ESCRT-IIIA paralogs, known to form heteropolymers, retain Hofund elements at their N-termini. In yeast, mutating these elements blocks ESCRT-III-dependent Mup1 transport to vacuoles. So these elements matter in eukaryotes too.
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
Is this Asgard-specific, or conserved with their eukaryotic paralogs? Hard to tell, since the exact molecular mechanism of fission by eukaryotic ESCRT-III remains blurry, probably due to its complexity. Let’s figure it out!
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
Meet Hofund, the N-terminal amphipathic helix of 15 aa in Heimdall ESCRT-IIIA (named after Heimdall’s sword). How do we know Hofund is the molecular trigger for fission? Remove Hofund → ESCRT-IIIA loses fission activity. Add Hofund alone → uncontrolled fission.
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
Through membrane fission! We show in vitro that the Asgard Heimdallarchaeota (Heimdall) ESCRT-IIIA subunit is inherently capable of triggering fission upon subunit turnover driven by ATP hydrolysis by Vps4. And the key question: what actually destabilizes the membrane when ESCRT-IIIA turns over?
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Javier Espadas @javierespadas.bsky.social · 01/12/2025
In a recent work, @buzzbaum.bsky.social and colleagues showed an Asgard archaeon with internal vesicles. www.biorxiv.org/content/10.1... How might Asgard ESCRT-III have contributed to compartmentalization?
biorxiv.org
An Asgard archaeon with internal membrane compartments
The emergence of eukaryotes from a merger between an archaeon and a bacterial cell ∼two billion years ago involved a profound change in cellular organisation. While the order in which different featur...
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Roux Lab, Geneva @rouxlab.bsky.social · 01/12/2025
Fantastic work from Javier @javierespadas.bsky.social in collaboration with @buzzbaum.bsky.social and @kaksonen.bsky.social labs, thank you Chris Toret, thank you Diorge @diorgeps.bsky.social!
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Juanma García-Arcos @juanmagararc.bsky.social · 27/11/2025
Thanks to all the team at @rouxlab.bsky.social and abroad: @pauguillamat.bsky.social @caterinatomba.bsky.social @giodang.bsky.social @colomlab.bsky.social @lizhinde.bsky.social @javierespadas.bsky.social and many more
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Juanma García-Arcos @juanmagararc.bsky.social · 27/11/2025
Overall, the work shows that tension gradients arise from the combination of actin dynamics and strong cell–substrate adhesion, rather than from migration itself. Link: rdcu.be/eRTQA
rdcu.be
Adherent cells sustain membrane tension gradients independently of migration
Nature Communications - This study shows that adherent cells maintain membrane tension gradients even without moving. Using a fluorescent probe, the authors reveal that actin and adhesion forces...
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Juanma García-Arcos @juanmagararc.bsky.social · 27/11/2025
We accompanied this dynamic live Flipper-TR FLIM imaging with lipid diffusion analysis, spatial lipidomics (shown below), and cool in vitro reconstitutions of tension gradients using supported lipid bilayers that are expanding
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Juanma García-Arcos @juanmagararc.bsky.social · 27/11/2025
A key result: adherent cells maintain long-range membrane tension gradients even when they are not migrating! (micropatterned cells below) In contrast, non-adherent migrating cells *do not* show these gradients.
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Pau Guillamat @pauguillamat.bsky.social · 12/11/2025
Microfluidic pumping with active nematics! Self-organized and self-sustained. No external pumps. @pnas.org @ub.edu www.pnas.org/doi/10.1073/... #ActiveMatter #Microfluidics #SoftMatter
pnas.org
Active nematic pumps | PNAS
Microfluidics involves the manipulation of flows at the microscale, typically requiring external power sources to generate pressure gradients. Alte...
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Roux Lab, Geneva @rouxlab.bsky.social · 14/11/2025
Maria Tettamanti shows that inhibition of TORC2 by the small amphipath PalmC induces the TORC2-dependent internalization of sterols. Congrats to Maria and all coworkers involved, and to EMBOj for the efficient review process: use review commons! @biology-unige.bsky.social @sciencesunige.bsky.social
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MOREL Lab / MEMBRAMICS research @membramics-lab.bsky.social · 07/11/2025
Etienne @membramics-lab.bsky.social is very happy to visit @rouxlab.bsky.social in Geneva! great people, great projects, good memories...
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Biology-UNIGE @biology-unige.bsky.social · 03/11/2025
‪ Congratulations @centriolelab.bsky.social @dudinlab.bsky.social and @gautamdey.bsky.social for your publication in @cp-cell.bsky.social: Charting the landscape of #cytoskeletal diversity in #microbial eukaryotes #Expansion #Microscopy @sciencesunige.bsky.social www.unige.ch/medias/en/20...
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Juanma García-Arcos @juanmagararc.bsky.social · 05/10/2025
*ALL*source data and Python notebooks are available (you can reproduce all figures!) 🔗 doi.org/10.6084/m9.f... We hope this helps make lifetime analysis transparent and comparable across setups. 📄 www.biorxiv.org/content/10.1... @rouxlab.bsky.social #FLIM #FlipperTR #Microscopy #OpenScience
doi.org
Data and codes
Data and codes corresponding to the preprint:
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Juanma García-Arcos @juanmagararc.bsky.social · 05/10/2025
🚨 New preprint out! “Fluorescence lifetime estimation: a practical approach using Flipper-TR FLIM” with Tithi Mandal and @rouxlab.bsky.social We benchmark and describe step-by-step Flipper-TR FLIM measurements across different set-ups and and strategies. www.biorxiv.org/content/10.1...
biorxiv.org
Fluorescence lifetime estimation: a practical approach using Flipper-TR FLIM
Flipper-TR is a membrane dye sensitive to lipid packing widely used to probe membrane tension in live cells via fluorescence lifetime imaging microscopy (FLIM). However, no consensus currently exists ...
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Holthuis Lab @holthuislab.bsky.social · 30/09/2025
I am pleased to 📣 today’s superb thesis defense by Christian Schroer on “Chemical strategies for studying lipid signaling and transport”. Part of his work was recently published in the JLR; the other part will follow soon. A very proud and somewhat tipsy “Doktorvater” 🥂
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Markku Hakala @mhakala.bsky.social · 29/09/2025
Undergraduate/internship/master's thesis position: jobs.helsinki.fi/job-invite/4...
jobs.helsinki.fi
Research Assistant or Master Thesis worker, group Hakala
Research Assistant or Master Thesis worker, group Hakala
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Markku Hakala @mhakala.bsky.social · 29/09/2025
PhD student position: jobs.helsinki.fi/job-invite/4...
jobs.helsinki.fi
Doctoral Researcher, group Hakala
Doctoral Researcher, group Hakala
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Markku Hakala @mhakala.bsky.social · 29/09/2025
I have a PhD student and an undergrad student positions open at the Institute of Biotechnology @helsinki.fi We are using reconstitution, cell and structural biology to study protein-membrane interactions and membrane microdomain formation. Links to calls below! Feel free to drop a message and share!
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De Camilli Lab @pdc-lab.bsky.social · 29/09/2025
"Impaired hematopoiesis and embryonic lethality at midgestation of mice lacking both lipid transfer proteins VPS13A and VPS13C" out now in PLOS Biology journals.plos.org/plosbiology/...
journals.plos.org
Impaired hematopoiesis and embryonic lethality at midgestation of mice lacking both lipid transfer proteins VPS13A and VPS13C
VPS13A and VPS13C are bridge-like lipid transport proteins with distinct subcellular localization and function, and their absence is linked with chorea-acanthocytosis and Parkinson's disease, respecti...
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Mechanobiology Institute @mbisg.bsky.social · 11/09/2025
Order matters! Aurelien Roux @rouxlab.bsky.social studied the formation of multi-cellular tornado-like structures and regeneration of heads in hydra to share with us how stress fields, topology and geometry of initial tissue organization set the sequence of morphogenesis. #MBIMPG2025
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Erdinc Sezgin @sciezgin.bsky.social · 08/09/2025
Previous preprint is now published in RSC Chemical Biology. If you are interested in plasma membrane labeling, see the paper! 👇 pubs.rsc.org/en/content/a...
pubs.rsc.org
Plasma membrane labelling efficiency, internalization and partitioning of functionalized fluorescent lipids as a function of lipid structure
Labeling the plasma membrane for advanced imaging remains a significant challenge. For time-lapse live cell imaging, probe internalization and photobleaching are major limitations affecting most membr...
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Roux Lab, Geneva @rouxlab.bsky.social · 10/07/2025
Nice discussions after the talk given online yesterday at cytophys.org, presenting the work of @pauguillamat.bsky.social @clairedessalles.bsky.social @yamini-ravichan.bsky.social @oriolmb.bsky.social and Tithi Mandal. Available on the lab youtube channel at: youtu.be/g-7HomnPdtk
youtu.be
Cell forces, order and flows during In vitro reconstitution of morphogenesis
YouTube video by Roux Lab - University of Geneva
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Manuel Thery @manuelthery.bsky.social · 08/07/2025
Ever wished to become an actin star? 😎 Then try getting suspended above a non-adhesive substrate. www.nature.com/articles/s41...
nature.com
A multicellular star-shaped actin network underpins epithelial organization and connectivity - Nature Communications
The combined role of cellular junctions and actomyosin networks in tissues remains unclear. Here, the authors identify a tissue-scale star-shaped network of actomyosin that preserves cell shape, limit...
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Marko Kaksonen @kaksonen.bsky.social · 07/07/2025
Hello microscopy and imaging experts and enthusiasts! We are looking for a staff scientist to join us here in Geneva to work on microscopy and image analysis projects! See the link for the job announcement (in French and in English). Please apply and/or repost! jobs.unige.ch/www/wd_porta...
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Ben Engel @cellarchlab.com · 27/06/2025
The @embo.org ESCRT meeting was packed with membrane remodeling from every branch of the tree of life🌳. Some awesome science 🧪 highlights in the next posts 🧵. But a first impression… the venue!! Wow, Caux castle up a cogwheel train, overlooking Lac Léman! Perfect! 🌄 Thank you @rouxlab.bsky.social 🤗
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