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Rob Mettelman

@rmettelman.bsky.social
63 followers 126 following 2 posts

Assistant Professor | University of Pittsburgh SOM | Center for Vaccine Research | T cell Immunity | Influenza | Virus Enthusiast

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Reposted by Rob Mettelman
Waggoner Lab @labwaggoner.bsky.social · 12h
Human lung organoid modelling of tissue-resident antiviral T cell responses @nature.com @stanfordmedicine.bsky.social www.nature.com/articles/s41...
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Waggoner Lab @labwaggoner.bsky.social · 02/10/2026
@biorxivpreprint.bsky.social A pro-inflammatory effector-memory T cell program links peripheral EBV priming to CNS autoimmunity www.biorxiv.org/content/10.6...
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Asya Minervina @asya-minervina.bsky.social · 04/09/2026
Our paper is out! It turns out that finding the right TCR partner is a bit like matching socks🧦: almost every pair fits, but only a small fraction make the right match for antigen recognition. If you don’t feel like diving into the full paper, there’s also a one-page summary!
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Paul Thomas @pgtimmune.bsky.social · 04/09/2026
TCR specificity prediction is advancing rapidly. The central question is not only which TCR sequence recognizes an antigen, but also which TCR pairings make recognition possible & where is the binding boundary? Our new paper tackles these questions. 🧵 www.science.org/doi/10.1126/...
science.org
Uneven TCR chain pairing constraints govern epitope recognition
Combinatorial pairing of independently recombined T cell receptor (TCR) α- and β-chains is central to diversifying the TCR repertoire. Although sequence motifs in one chain correlate with epitope reco...
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Uri Alon @urialonlab.bsky.social · 06/05/2026
Identify. Attack. Resolve. The immune system follows a perfect defense program: ignore weak/self signals, attack true threats with force, then shut down to avoid damage. (1/2) www.science.org/doi/10.1126/...
science.org
Excitability as a design principle in the immune system
A simple pulse-and-rest circuit may explain how immune cells strike hard at threats yet avoid self-destruction.
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Reposted by Rob Mettelman
Waggoner Lab @labwaggoner.bsky.social · 13/04/2026
Despite Low Uptake, Flu Vaccines Show Benefit to Children from 2021-24 @cincyresearch.bsky.social scienceblog.cincinnatichildrens.org/despite-low-... publications.aap.org/pediatrics/a...
scienceblog.cincinnatichildrens.org
Despite Low Uptake, Flu Vaccines Show Benefit to Children from 2021-24 - Research Horizons
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Reposted by Rob Mettelman
Eric Topol @erictopol.bsky.social · 18/03/2026
What we should be doing, but we're not: "Arming the immune system for the next zoonotic coronavirus spillover" A nasal dendritic-cell targeting vaccine that prevents viral transmission vs pan-sarbecovirus clades (i.e. all coronaviruses, irrespective of variants) www.jci.org/articles/vie...
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Carolien van de Sandt @cvandesandt.bsky.social · 13/03/2026
📢 A long-term mystery in Flu finally solved by Mathilde Richard & her team at @erasmusmc.bsky.social in @science.org : How do #influenza viruses transition from low to high path? Polymerase gets trapped by the RNA template leading to backtrackig and insertions 🤯 www.science.org/doi/10.1126/...
science.org
Polymerase trapping as the mechanism of H5 highly pathogenic avian influenza virus genesis
Highly pathogenic avian influenza viruses (HPAIVs) derive from H5 and H7 low pathogenic avian influenza viruses (LPAIVs). Although insertion of a furin-cleavable multibasic cleavage site (MBCS) in the...
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Reposted by Rob Mettelman
Waggoner Lab @labwaggoner.bsky.social · 10/03/2026
Immune-microbiome coordination defines interferon setpoints in healthy humans @cellcellpress.bsky.social www.cell.com/cell/fulltex... @spitzerlab.bsky.social @ucsfhealth.bsky.social @joelbabdor.bsky.social @pennmedicine.bsky.social
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Jennifer Juno @jenjuno.viralvaxlab.com · 03/03/2026
🎉 Our new study of CD4 TFH quality is now online @ebiomedicine.bsky.social! We know that TFH are critical for germinal centres and antibody production, but want to understand whether all CD4 responses can be equally helpful to B cells. www.thelancet.com/journals/ebi...
thelancet.com
Immunodominance is a poor predictor of vaccine-induced T follicular helper cell quality
Our findings emphasise the importance of CD4+ T cell help for programming robust and durable humoural immunity, and provide crucial insights to guide the rational incorporation of favourable T cell ep...
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Rob Mettelman @rmettelman.bsky.social · 04/03/2026
The Mettelman Lab at the University of Pittsburgh Center for Vaccine Research has officially opened its doors, and I’m looking to hire a Lab Manager! If interested, please apply using the link below Come join our team of 1! cfopitt.taleo.net/careersectio...
cfopitt.taleo.net
Laboratory Manager
Click the link provided to see the complete job description.
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Joe Sabatino @jsabatino37.bsky.social · 05/02/2026
Overjoyed to share our new work exploring the antigen specificity of CSF-expanded CD8+ T cells in #multiplesclerosis #EBV in @natimmunol.nature.com #immunology 🧪🧵1/ www.nature.com/articles/s41...
nature.com
Antigen specificity of clonally enriched CD8+ T cells in multiple sclerosis - Nature Immunology
Sabatino and colleagues examine expanded CD8+ T cell clonotypes from a small cohort of multiple sclerosis patients. They identified several cognate peptide epitopes that derive from Epstein–Barr virus...
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Reposted by Rob Mettelman
Mark Brimble @brimble.bsky.social · 31/01/2026
Congratulations to now graduated PhD student Stephen Winston for leading this study on rAAV contaminants. This study shows that a mere 2 nucleotide modification to the (Rep78/68 driving) p5 promoter results in rAAV with equivalent titers but ~50-fold lower p5-derived contaminants. #genetherapy #AAV
cell.com
Rational engineering of the P5 TRS-mimic site and REP78/68 start codon yields promoter variants that improve rAAV vector purity while maintaining high titers.
During recombinant adeno-associated virus (rAAV) production, certain components of the manufacturing system can be encapsidated as unwanted nucleic acid contaminants. Prior work has established that t...
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saligramalab.bsky.social @saligramalab.bsky.social · 28/01/2026
@CellPressNews For the #love of #TCRs -#Read this >#Scalable #TCR synthesis and screening enable antigen reactivity mapping... www.sciencedirect.com/science/arti...
sciencedirect.com
Scalable TCR synthesis and screening enable antigen reactivity mapping in vitiligo
T cells initiate targeted immune responses using T cell receptors (TCRs) to recognize specific antigens. Mapping TCRs to antigens at scale remains a m…
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Reposted by Rob Mettelman
Pam Brigleb @pambrigleb.bsky.social · 27/01/2026
Excited to see our paper out, it was a great team effort! Immune history confers antibody- and T cell-dependent cross-protection against highly pathogenic avian influenza H5N1 viruses | Journal of Virology journals.asm.org/doi/10.1128/...
journals.asm.org
Immune history confers antibody- and T cell-dependent cross-protection against highly pathogenic avian influenza H5N1 viruses | Journal of Virology
The rapid spread of highly pathogenic avian H5 influenza (HPAI) clade 2.3.4.4b in U.S. cattle represents an urgent and evolving public health threat. Our findings reveal that pre-existing immunity, whether from seasonal H1N1 infection or live-attenuated vaccination, can confer substantial protection against lethal bovine- and feline-derived HPAI H5N1 viruses, even in the absence of strong cross-neutralizing antibody titers. By integrating T cell epitope mapping with mechanistic depletion studies, we demonstrate that conserved CD4 and CD8 T cell epitopes across H1N1 and H5N1 strains underpin this cross-protection. Critically, loss of CD4 T cell help during primary H1N1 infection disrupts the development of cross-reactive antibody responses and markedly worsens outcomes after H5N1 challenge. These results identify memory T cell responses as important determinants of heterosubtypic immunity and highlight the need to incorporate T cell-focused metrics into risk assessment, vaccine evaluation, and preparedness strategies for emerging HPAI H5N1 viruses.
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St. Jude Children's Research Hospital @stjuderesearch.bsky.social · 26/01/2026
Infectious diseases remain one of the greatest threats to children. As a WHO Collaborating Center for Influenza, St. Jude helps inform global flu vaccine decisions through year-round surveillance and data sharing.
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Michelle Linterman @linterman.bsky.social · 26/01/2026
Ever wondered what happens if you remove Tfh cells from established germinal centres?
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Victor J. Torres @torreslab.bsky.social · 24/01/2026
Excited to announce the upcoming 2026 Microbial Toxins and Pathogenicity GRC and GRS meeting taking place July 12 - 17, 2026 at Waterville Valley in New Hampshire. This meeting will be chaired by yours truly and co-chaired by @sunnyshinlab.bsky.social www.grc.org/microbial-to...
grc.org
2026 Microbial Toxins and Pathogenicity Conference GRC
The 2026 Gordon Research Conference on Microbial Toxins and Pathogenicity will be held in Waterville Valley, New Hampshire. Apply today to reserve your spot.
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Ellen Foxman @ellenfoxman.bsky.social · 20/01/2026
Rhinoviruses cause common cold & asthma attacks but are also often benign. Using nasal organoids, we learned how the community of cells in the lining the nasal passages coordinates to respond to rhinovirus and which responses lead to excess mucus & inflammation. www.cell.com/cell-press-b...
cell.com
Rhinovirus triggers distinct host responses through differential engagement of epithelial innate immune signaling
Rhinoviruses are the most frequent cause of common colds and also a major cause of respiratory distress in high-risk groups. Using single-cell sequencing of rhinovirus-infected nasal epithelial organo...
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Apoorva Mandavilli @apoorvanyt.bsky.social · 13/01/2026
Six leading medical organizations plan to ask the courts to throw out revisions to the childhood vaccination schedule announced last week by Health Secretary Robert F. Kennedy Jr. and other federal officials. (Gift link) www.nytimes.com/2026/01/13/h...
nytimes.com
Medical Groups Will Try to Block Childhood Vaccine Recommendations
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Rod Rahimi @rodrahimi.bsky.social · 09/01/2026
Delighted that our latest paper is out at @mucosalimmunol.bsky.social. Here, using bronchoscopies and scRNA- and TCR-seq, we found that T cells isolated from bronchoalveolar lavage versus the airway mucosal are surprisingly distinct. Summary of the original preprint below. #Immunology #PCCM
sciencedirect.com
Distinct phenotypes and repertoires of bronchoalveolar and airway mucosal T cells in health and allergic asthma
T cells play a central role in host protection against respiratory pathogens, but a maladaptive T cell response can lead to pulmonary diseases. Previo…
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Reposted by Rob Mettelman
Edward Nirenberg @enirenberg.bsky.social · 05/12/2025
AAP on the ball and already out with comments about the ACIP meeting: www.aap.org/en/news-room...
aap.org
Statement from Leading Medical, Health and Patient Advocacy Groups on CDC Vaccine Meeting
"We are deeply alarmed by the actions taken this week by the Centers for Disease Control and Prevention’s Advisory Committee on Immunization Practices (ACIP). The apparent goal of this meeting was to ...
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Waggoner Lab @labwaggoner.bsky.social · 26/11/2025
Virus-specific CD8+ tissue-resident memory T cells trigger epithelial antiviral defenses via IFNγ @cp-immunity.bsky.social @emoryuniversity.bsky.social www.cell.com/immunity/ful...
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Mikhail Pogorelyy @pogorely.bsky.social · 25/11/2025
Excited to see our TIRTL-seq method published in Nature Methods www.nature.com/articles/s41...! Some updates after the revision: (1/4)
nature.com
TIRTL-seq: deep, quantitative and affordable paired TCR repertoire sequencing - Nature Methods
TIRTL-seq is a high-throughput method for paired T cell receptor sequencing at the cohort scale.
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saligramalab.bsky.social @saligramalab.bsky.social · 26/11/2025
We are #absolutely #thrilled to #present @cp-immunity.bsky.social - Deep profiling of human T cells defines compartmentalized clones and phenotypic trajectories across blood and tonsils: Immunity www.cell.com/immunity/ful...
cell.com
Deep profiling of human T cells defines compartmentalized clones and phenotypic trajectories across blood and tonsils
Human T cell responses are often studied using blood, yet most T cells reside in tissues. By comparing T cell receptor repertoires from millions of T cells from autologous tonsils and blood, Sureshcha...
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Reposted by Rob Mettelman
Waggoner Lab @labwaggoner.bsky.social · 25/11/2025
@natmethods.nature.com TIRTL-seq: deep, quantitative and affordable paired TCR repertoire sequencing www.nature.com/articles/s41... @pogorely.bsky.social @fredhutch.org @stjude.bsky.social @pgtimmune.bsky.social
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Waggoner Lab @labwaggoner.bsky.social · 25/11/2025
High expression of IL-18 receptor alpha correlates with severe respiratory viral disease and defines T cells with reduced cytotoxic signatures www.nature.com/articles/s41... @natcomms.nature.com @katherinekedz.bsky.social @thedohertyinst.bsky.social @unimelb.bsky.social
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Paul Thomas @pgtimmune.bsky.social · 24/11/2025
FLC is a rare, aggressive liver cancer lacking effective systemic therapies. Our vaccine targets the recurrent DNAJB1::PRKACA fusion, offering a universal neoantigen to drive anti-tumor immunity. www.nature.com/articles/s41...
nature.com
A therapeutic peptide vaccine for fibrolamellar hepatocellular carcinoma: a phase 1 trial - Nature Medicine
In this phase 1 trial, treatment of patients with fibrolamellar hepatocellular carcinoma with a therapeutic peptide vaccine targeting the fusion kinase DNAJB1–PRKACA, which is the driver of the diseas...
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Paul Thomas @pgtimmune.bsky.social · 24/11/2025
Two complementary studies from our group out today: a therapeutic peptide vaccine trial for fibrolamellar carcinoma (FLC) & TIRTL-Seq, our robust method for deep quantitative paired TCR sequencing a🧵w/ @markyarchoan.bsky.social & @pogorely.bsky.social www.nature.com/articles/s41...
nature.com
TIRTL-seq: deep, quantitative and affordable paired TCR repertoire sequencing - Nature Methods
TIRTL-seq is a high-throughput method for paired T cell receptor sequencing at the cohort scale.
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Paul Thomas @pgtimmune.bsky.social · 07/11/2025
After many rewarding years at @StJudeResearch surrounded by exceptional colleagues & groundbreaking science, I’m delighted to join @fredhutch to push boundaries in viral & cancer immunology. Grateful to St. Jude and looking forward to what’s next at FH! More here: www.fredhutch.org/en/news/cent...
fredhutch.org
Viral immunologist taps ‘incredible potential’ of immune system
New Fred Hutch Cancer Center viral immunologist Dr. Paul Thomas is working to turn the "incredible potential" of the immune system into real-life diagnostic and therapeutic applications. He studies ho...
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Marc Veldhoen @marcveld.bsky.social · 28/10/2025
Multisystem inflammatory syndrome in children is a SARS-CoV-2 triggered Kawasaki disease Like post acute infection syndrome, tihis is not new. But, we now have identified a trigger, and have more early event data. www.nature.com/artic... 1/4
nature.com
Multisystem inflammatory syndrome in children is a SARS-CoV-2 triggered Kawasaki disease
Pediatric Research - Multisystem inflammatory syndrome in children is a SARS-CoV-2 triggered Kawasaki disease
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Waggoner Lab @labwaggoner.bsky.social · 09/10/2025
Antiviral MX1 transiently associates in the cytoplasm with neosynthesized viral ribonucleoproteins and, using dynein, reroutes them toward the microtubule organizing center where they remain sequestered www.pnas.org/doi/10.1073/...
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St. Jude Children's Research Hospital @stjuderesearch.bsky.social · 26/09/2025
New study reveals pasteurized milk containing H5N1 influenza viral components poses minimal health risks and doesn’t alter influenza immunity. Regularly drinking contaminated pasteurized milk doesn’t increase flu susceptibility in model systems. ow.ly/stPC50X32eB
Person in a bright pink blazer standing in a hallway. Text overlay reads: Pasteurized milk with H5N1 viral components does not impact flu immunity. St. Jude Children's Research Hospital logo in the corner.
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Joe Sabatino @jsabatino37.bsky.social · 16/09/2025
Very pleased to publish this new review with Farah Wahbeh on the role of #EBV in #Multiplesclerosis. I learned a lot writing this, I hope others find it useful too www.neurology.org/doi/10.1212/...
neurology.org
Epstein-Barr Virus in Multiple Sclerosis | Neurology Neuroimmunology & Neuroinflammation
Epstein-Barr virus (EBV) is a very common herpesvirus that infects more than 90% of the general population. Epidemiologic data indicate that EBV is a requisite risk factor for the development of multi...
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Joanne Flynn @joanneflynn19.bsky.social · 20/08/2025
We are hiring! The Dept of Microbiology and Molecular Genetics is looking for faculty at the Assistant or Associate professor level (tenure track). Please consider joining our vibrant microbiology and immunology community at the University of Pittsburgh School of medicine
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E John Wherry @ejohnwherry.bsky.social · 14/08/2025
What's the difference between Trm and exhausted CD8 T cells? Simone Park's new work dissects this important question. These cell types are often confused, but are ontologically and mechanistically distinct with implications for immunotherapy responses. www.biorxiv.org/content/10.1...
biorxiv.org
Divergent ontogeny of Tissue Resident Memory and Tissue Resident Exhausted CD8+ T cells underlies distinct functional potential
Persistent antigen stimulation promotes differentiation of exhausted CD8+ T (TEX) cells. TEX cells are distinct from circulating memory T (TCIRCM) cells but share many features with tissue-resident me...
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Alba Grifoni @albagrifoni.bsky.social · 06/08/2025
Just out on @cp-cell.bsky.social! Focusing on Conserved T-cell Epitope Regions (CTERs) increases the ability of T cells to recognize Coronaviruses of pandemic concern. This strategy is broadly applicable to other viral families @tertuapn.bsky.social @lji.org www.sciencedirect.com/science/arti...
sciencedirect.com
Highly conserved Betacoronavirus sequences are broadly recognized by human T cells
The COVID-19 pandemic highlighted the critical need for vaccine strategies capable of addressing emerging viral threats. Betacoronaviruses, including …
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Bloom lab @jbloomlab.bsky.social · 04/08/2025
Wanted to flag this interesting study led by our collaborators @kinglabipd.bsky.social suggesting that at least in some contexts, the immunogenicity of H5 influenza vaccines can be improved by mutations that stabilize the HA protein.
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Waggoner Lab @labwaggoner.bsky.social · 31/07/2025
Early-life human CD8+ T cells exhibit rapid, short-lived effector responses and a unique transcription factor landscape @lucasite-lab.bsky.social www.pnas.org/doi/10.1073/...
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Waggoner Lab @labwaggoner.bsky.social · 31/07/2025
Multisystem inflammatory syndrome (MISC) in children involve inflammation caused by SARS-CoV-2 proteins leaking from the gut into the bloodstream Larazotide, a zonulin antagonist, promotes rapid recovery @laelyonker.bsky.social www.science.org/doi/10.1126/...
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Paul Thomas @pgtimmune.bsky.social · 15/07/2025
How much of the TCR repertoire can we make sense of? Can your TCR and GEX data be put in the context of other conditions/tissues? How many varieties of T cells are in the repertoire zoo? All these questions (& more) addressed in our latest preprint: MetaCoNGA www.biorxiv.org/content/10.1... . a 🧵
biorxiv.org
Diverse modes of T cell receptor sequence convergence define unique functional and cellular phenotypes
Single-cell techniques allow concurrent study of gene activity and T cell receptor (TCR) sequences, identifying connections between TCR structure and cell traits. Expanding on our CoNGA software, we p...
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Sarah Cobey @cobey.bsky.social · 23/06/2025
Sang Woo (Daniel) Park and I are excited to share a new preprint, "Susceptible host dynamics explain pathogen resilience to perturbations" [1/8] www.biorxiv.org/content/10.1...
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Denis Wirtz @deniswirtz.bsky.social · 07/05/2025
We have updated our database of funding opportunities for Early-Career Researchers (private foundations, federal, international) We have 456 entries, for which we provide $ amount, deadline, eligibility criteria, etc. Download this massive database here for free: research.jhu.edu/rdt/funding-...
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Journal of Experimental Medicine @jem.org · 07/05/2025
Impaired Aire-dependent IFN signaling in the thymus precedes the protective autoantibodies to IFNα, say Artur Stoljar, Maksym Zarodniuk, Pärt Peterson and colleagues @unitartu: rupress.org/jem/article/... #Autoimmunity #Tolerance
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jie-immunology.bsky.social @jie-immunology.bsky.social · 20/03/2025
Join us on the topic of an aberrant immune-epithelial niche driving respiratory long COVID at the ATS online journal club. Please register below here. site.thoracic.org/events/an-ab...
site.thoracic.org
American Thoracic Society | An Aberrant Immune–Epithelial Progenitor…
The American Thoracic Society is the world's leading medical society dedicated to accelerating the advancement of global respiratory health through…
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Nature Portfolio @natureportfolio.nature.com · 17/03/2025
A study in Nature Microbiology finds that the FDA-approved antiviral baloxavir improves disease outcomes in mice infected with avian influenza A (H5N1) virus, compared with the current standard treatment of oseltamivir. go.nature.com/4iB93Dy 🧪
This is figure 1, which shows the effects of OSE and BXA on survival and viral titres in mice inoculated with A/bovine/Ohio/B24OSU-439/2024-contaminated milk.
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The American Association of Immunologists @aai.org · 05/03/2025
Meeting with staff from Senator @slotkin.senate.gov (D-MI) office with Cherie Butts, Insha Zahoor and Mark Brimble. You can amplify their impact to #FundNIH by sending your letter now: www.aai.org/Public-Affai.... #PPFPHillDay #SciPol #AAIadvocacy
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Mark Copelovitch @mcopelov.bsky.social · 22/02/2025
The entire business model of American R1 universities is not viable without restoration of federal funding, & every individual institution pretending it can solve this problem alone is also not viable. University presidents need to be speaking out, collectively & loudly about this, in DC, right now.
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Sarah Cobey @cobey.bsky.social · 19/02/2025
This is not news to most scientists by now, but others might be interested. Biomedical research is undergoing tremendous damage, even beyond the firings at NIH, CDC, and NSF; the suppression of data sharing; and the attacks on initiatives to improve scientific quality.
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Marion Brunck @marionbrunck.bsky.social · 04/02/2025
Sweat 😓, tears 😭, blood (and #colostrum) went into producing this paper 🧪 Ok mostly blood and colostrum 😜 We studied B cells and #antibodies in blood vs. colostrum (the first milk) from mothers with BMI >30 (#obesity) or BMI <25 (normal weight, as per WHO) Key findings in 🧵
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