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Pedro Ortega

@pedroorteg.bsky.social
254 followers 344 following 16 posts

Postdoctoral researcher at @CABIMER. Former researcher at @UCIrvine and @unisevilla. Cellular Stress Signaling and Poly(ADP-ribose) biology. scholar.google.com/citations?user=U…

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Reposted by Pedro Ortega
EMBO @embo.org · 25/09/2026
Tomorrow our Fellows' Meeting begins in Heidelberg! 🧪 We're looking forward to welcoming our fellows for days of discussion, #exchange and fresh ideas. Next week, they will be joined by our EMBO Members. Safe travels to everyone on their way and see you tomorrow! #EMBOFMM26 #community
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Román González-Prieto @romangp.bsky.social · 23/09/2026
Pre-print Alert! Spearheaded by @emilyshidalgo, RNF25 ubiquitin E3 activity modulates the three processes of the central dogma of Molecular Biology: DNA replication, Transcription and Translation by promoting the rapid degradation of different substrates www.biorxiv.org/content/10.6...
biorxiv.org
RNF25 Ubiquitin E3 activity Safeguards Genome Integrity by Modulating DNA Replication, Transcription and Translation.
The human genome encodes several hundreds of ubiquitin E3 enzymes, most of which have poorly understood biological roles. In search for novel ubiquitin E3 enzymes involved in DNA damage tolerance, we ...
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Reposted by Pedro Ortega
Lopes_Lab @lopeslab.bsky.social · 16/09/2026
Thrilled to share a new important study from the lab, published today in @nature.com, showing how cohesin mediates efficient replication fork plasticity and stress response, using its loop extrusion activity to promote 3D contacts on replicating DNA: www.nature.com/articles/s41...
nature.com
Cohesin reshapes replication fork contacts to aid fork slowing and reversal - Nature
Cohesin-mediated loop extrusion limits sister-fork coupling and tethers nearby replication forks under replication stress, promoting fork reversal and slowing fork progression to safeguard genome...
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ETH Laboratory of Toxicology @sturlalab.bsky.social · 21/08/2026
Check out the STAR publication: "Click-code-seq protocol for genome-wide single-nucleotide-resolution mapping of major types of DNA modifications" ⭐ www.cell.com/star-protoco... 🧬 Whole #genome instability 💻 #Computational pipeline
cell.com
Click-code-seq protocol for genome-wide single-nucleotide-resolution mapping of major types of DNA modifications
DNA modifications are central to carcinogenesis, chemotherapy drug action, neurodegeneration, and aging. Here, we present a protocol for click-code-seq, a next-generation sequencing technique for geno...
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Natalia Sampaio @drnatsampaio.bsky.social · 11/08/2026
We set out to map what #RNA binds to immune receptor #MDA5 during #virus infection. Our findings were unexpected: rather than viral, it was host RNA! Excited (translate: frankly, knackered) to share our paper in @natureportfolio.nature.com Nature Immunology! 🔗 www.nature.com/articles/s41... 🧵👇
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Rafael D. Acemel @rdacemel.bsky.social · 06/08/2026
The Acemel lab is #hiring!! :) We are looking for a PhD student to join us at @cabd-upo-csic.bsky.social to study developmental plasticity, epigenetics and evolution using medaka 🐟 and AI models 💻 . Deadline for applications 4th of September. See more details 👇
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Centro Andaluz de Biología del Desarrollo @cabd-upo-csic.bsky.social · 21/07/2026
Great talk last Friday at #CABDseminars by Pedro Ortega! Pedro told us about his past and future scientific projects. Pedro was hosted by Peter Askjaer. Thanks for coming @pedroorteg.bsky.social
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Centro Andaluz de Biología del Desarrollo @cabd-upo-csic.bsky.social · 15/07/2026
#CABDseminars "From DNA Damage to Translation Shutdown" by Pedro Ortega @pedroorteg.bsky.social , @cabimer.bsky.social 🗓️ July 17th ⏰12 pm 📍Rosalind Franklin Auditorium, CABD Hosted by Peter Askjaer
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Faraz Mardakheh @handle.invalid · 03/07/2026
🚨🚨NEW PREPRINT ALERT!🚨🚨Proud to present our recent study, out now on bioRxiv, in which we reveal an RNA-dependent positive feedback loop that drives malignant ribosome biogenesis and tumour growth (1/15). 🔗 www.biorxiv.org/content/10.6...
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Sandra Segura-Bayona @ssegurabayona.bsky.social · 01/07/2026
🧬 Our new paper is out in @natsmb.nature.com! ATRX is one of the most mutated genes in cancer, and linked to the rare ATR-X syndrome. We ran genome-scale CRISPR screens to map how it protects the genome, and found it is doing two separate jobs... 🧵 (1/4) nature.com/articles/s41594-026-01827-2
nature.com
Distinct ATRX functions cooperate with 9-1-1 and CST complexes to safeguard replication and telomere integrity - Nature Structural & Molecular Biology
Segura-Bayona et al. uncover genetically separable ATRX functions that independently safeguard telomeres and genome replication, revealing how CST and 9-1-1 pathways suppress accumulation of toxic sin...
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Fernando Gomez-Herreros Lab @fgh-lab.bsky.social · 16/06/2026
Very excited to announce the workshop "DNA–Protein Crosslinks: Mechanisms and Links to Rare Genetic Disorders", which will take place in Baeza (Spain) from 18–20 November 2026! www.unia.es/estudios-y-a...
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Pedro Ortega @pedroorteg.bsky.social · 14/06/2026
🧬 New work showing that PARP1 trapping activates ATM-mediated NF-κB signaling independently of DNA replication during TOP1 blockade. Glad to have contributed to this study from @buissonlab.bsky.social @ucirvine.bsky.social doi.org/10.1093/nar/...
doi.org
PARP1 trapping activates ATM-mediated NF-κB signaling independent of replication in response to TOP1 blockade
Abstract. The NF-κB signaling pathway is a key driver of inflammation and can be activated by many genotoxic stresses. Yet, the mechanisms by which differe
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Reposted by Pedro Ortega
Dr. Thomas Martínez @thomasmartinez.bsky.social · 05/06/2026
Check out our new review article on intrinsically disordered #microproteins now out in @acs.org Biochemistry! pubs.acs.org/doi/10.1021/...
pubs.acs.org
No Time to Fold: Intrinsically Disordered Microproteins in Action
Advances in genomics, proteomics, and bioinformatics have uncovered the existence of thousands of translated small open reading frames less than 100–150 codons in length that encode microproteins. In ...
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Bret Freudenthal @freudlab.bsky.social · 05/06/2026
How does a DNA repair enzyme find a needle in a haystack? 🧬 Our latest paper in NAR, led by the one and only C-trap queen Kaitlin Dehart, uses single-molecule imaging to watch APE1 scan DNA and lock onto AP-sites. @lumicks.bsky.social academic.oup.com/nar/article/...
academic.oup.com
A dynamic search mechanism enables APE1 to identify AP-sites in DNA
Abstract. Apurinic/apyrimidinic (AP) sites are among the most frequent DNA lesions, arising thousands of times per cell each day. These lesions threaten ge
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Alberto Ciccia @albertociccia.bsky.social · 02/05/2026
Happy to share our new review in @annualreviews.bsky.social on abasic sites and their impact on DNA replication written by @angelotaglialatela.bsky.social. www.annualreviews.org/content/jour...
annualreviews.org
Endogenous Sources of Abasic Sites and Implications for DNA Replication: Mechanisms of Fork Stalling and Recovery
Apurinic/apyrimidinic (AP) sites, also known as abasic sites, are among the most frequent DNA lesions, arising spontaneously or as intermediates in base excision repair. Their structural impediment to...
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keithcaldecott.bsky.social @keithcaldecott.bsky.social · 03/04/2026
Dear all, please see link below for Milano et al, describing a role for BRCA2 (& BRCA1) in the maturation of nascent DNA strand gaps during DNA replication in the presence of PARP inhibitor. Congratulations Larissa and all ! authors.elsevier.com/a/1mtQe3vVUP...
authors.elsevier.com
Please wait whilst we redirect you
All content on this site: Copyright © 2026 Elsevier B.V., its licensors, and contributors. All rights are reserved, including those for text and data mining, AI training, and similar technologies. For all open access content, the relevant licensing terms apply.
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Vincenzo Costanzo @labvincenzo.bsky.social · 22/03/2026
Excited to share our new review in Molecular Cell on replicative single-stranded DNA gaps and their role in genome instability and cancer therapy. #DNARepair #ReplicationStress #GenomeStability #CancerResearch #MolecularBiology #PARPinhibitors​​​​​​​​​​​​​​​​ www.cell.com/molecular-ce...
cell.com
Replicative gaps in DNA damage tolerance, genome instability, and cancer therapy
Replicative single-stranded DNA gaps arise when DNA synthesis proceeds past lesions or difficult-to-replicate regions. This review delineates the pathways that generate, stabilize, and process these i...
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Debbie Caswell @caswelldrm.bsky.social · 11/03/2026
Our lab is hiring! Please come join our lab in the department of @UCLRespiratory in @uclmedsci.bsky.social We have another fully funded postdoctoral position available, focusing on delineating the earliest stages of lung cancer development 🧪! Please apply using the link below: lnkd.in/gN4UK785
lnkd.in
LinkedIn
This link will take you to a page that’s not on LinkedIn
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Reposted by Pedro Ortega
Aurele Piazza @aurelepiazza.bsky.social · 09/03/2026
We just published a short conceptual review together with @angela-taddei.bsky.social on the spatial controls of homology search in both bacteria and eukaryotes. We discuss an emerging framework for homology search in cells with two main phases. Check it out: authors.elsevier.com/c/1mjyh,LqAZ...
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Pedro Ortega @pedroorteg.bsky.social · 23/02/2026
Glad to have contributed to this study from @thomasmartinez.bsky.social’s lab identifying a new microprotein, NISM, implicated in nucleolar integrity! 🎉 Check out the link below: 🔗 www.biorxiv.org/content/10.6...
biorxiv.org
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Dr. Thomas Martínez @thomasmartinez.bsky.social · 23/02/2026
🥳 🎉 New preprint from the lab is out! It's time to officially introduce the world to the Nucleolar Integrity and Stress Microprotein (NISM)! Check out the preprint in the link below
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Raquel A Oliveira @raoliveira.bsky.social · 17/02/2026
🧵 Thread: What happens when transcription isn’t properly shut off during mitosis? Our new preprint explores just that 👇 www.biorxiv.org/content/10.6...
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Edoardo Gianni @edogia.bsky.social · 13/02/2026
How could a simple self-replicating system emerge at the origins of life? RNA polymerase ribozymes can replicate RNA, but existing ones are so large that their self-replication seems impossible. Could they be smaller? Excited to share our latest work in @science.org on a new small polymerase. 1/n
science.org
A small polymerase ribozyme that can synthesize itself and its complementary strand
The emergence of a chemical system capable of self-replication and evolution is a critical event in the origin of life. RNA polymerase ribozymes can replicate RNA, but their large size and structural ...
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Nibal Badra @nibal-badra.bsky.social · 08/02/2026
Happy to share the results from my PhD thesis, in which we uncovered a function for FANCD2 on maintaining fork stability upon re-replication, now out in Nat. Commun! 📖 Read the full story here:  www.nature.com/articles/s41... Thanks to everyone who supported me along the way!
nature.com
FANCD2 restrains fork progression and prevents fragility at early origins upon re-replication - Nature Communications
Re-replication is a driving force of tumorigenesis and genomic instability. Here, the authors show that upon re-replication, FANCD2 localizes at early origins to limit replisome progression, ssDNA gap...
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Luijsterburglab @luijsterburglab.bsky.social · 15/01/2026
Excited to share our new Nature study! 🧬 We (sidrituruci.bsky.social et al) discovered that CFAP20 helps clear stalled RNAPII, preventing harmful clashes with DNA replication machinery. This protects cells from R-loops and genome instability. Full paper: www.nature.com/articles/s41...
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Lopes_Lab @lopeslab.bsky.social · 19/12/2025
Thrilled to share our latest work - now available in full in Nature Communications - led in my lab by @vcherdy.bsky.social, with key collaborative contributions from @nitikataneja.bsky.social . rdcu.be/eVrxX
rdcu.be
Nucleoplasmic Lamin A/C controls replication fork restart upon stress by modulating local H3K9me3 and ADP-ribosylation levels
Nature Communications - Replication fork plasticity upon genotoxic stress is modulated by nuclear architectural components by elusive mechanisms. Here the authors implicate Lamin A/C – best...
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Aura Carreira @acarreiralab.bsky.social · 10/12/2025
🚨 Exciting news! Our latest study is out in Nature Communications! We reveal how specific BRCA2 mutations can hijack transcriptional programs—beyond their role in DNA repair. 🔗 rdcu.be/eT1R9 #CancerResearch #BRCA2 #Genomics
nature.com
A recurrent pathogenic BRCA2 truncating variant reveals a role for BRCA2-PCAF complex in modulating NF-κB-driven transcription - Nature Communications
Pathogenic BRCA2 truncating variants in heterozygosis drive distinct cancer-linked mechanisms. Here the authors show that one causes PARPi sensitivity and HR loss via haploinsufficiency, while another...
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Alberto Marin @albertomarin.bsky.social · 04/12/2025
Thrilled to share that my postdoc research is published today in @science.org! We found that DNA repair uses cohesin complexes to build new chromatin loops that guide the homology search and boost accurate repair! 1/n www.science.org/doi/10.1126/...
science.org
Cohesin drives chromatin scanning during the RAD51-mediated homology search
Cohesin folds genomes into chromatin loops, the roles of which are under debate. We found that double-strand breaks (DSBs) induce de novo formation of chromatin loops in human cells, with the loop bas...
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Pablo Huertas’ lab @pablohuertaslab.bsky.social · 01/12/2025
Finally published! Our work on how the #CircadianClock controls DNA repair. This has direct implications for cancer treatment: #Chronotherapy. @CABIMER @UniSevilla rdcu.be/eSwxl
rdcu.be
Circadian regulation of homologous recombination by cryptochrome1-mediated dampening of DNA end resection
Nature Communications - The study shows that DNA double-strand break repair follows a circadian rhythm: homologous recombination peaks in the morning and declines by evening. CRY1 regulates CCAR2...
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Fernando Gomez-Herreros Lab @fgh-lab.bsky.social · 01/12/2025
New manuscript from the lab on @cddpress " H263A and SCAN1/H493R mutant TDP1 block TOP1-induced Double-Strand Break Repair during gene transcription in quiescent cells and promote cell death". rdcu.be/eSxtG @ibis-investigacion.bsky.social @unisevilla.bsky.social
rdcu.be
H263A and SCAN1/H493R mutant TDP1 block TOP1-induced double-strand break repair during gene transcription in quiescent cells and promote cell death
Cell Death & Disease - H263A and SCAN1/H493R mutant TDP1 block TOP1-induced double-strand break repair during gene transcription in quiescent cells and promote cell death
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Nature Cell Biology @natcellbio.nature.com · 13/06/2025
💫NEW: Saur, Lesage et al. report that RNA:DNA hybrids arise at double-strand breaks in transcribed genes, independently of de novo recruitment of RNA polymerase II/III, as a result of DSB-induced transcriptional repression. @lablegube.bsky.social @cbitoulouse.bsky.social bit.ly/4kFWGr1
bit.ly
Transcriptional repression facilitates RNA:DNA hybrid accumulation at DNA double-strand breaks - Nature Cell Biology
Saur, Lesage et al. report that RNA:DNA hybrids arise at double-strand breaks in transcribed genes, independently of de novo recruitment of RNA polymerase II/III, as a result of DSB-induced transcript...
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Andrew Blackford @andrewblackford.bsky.social · 10/09/2025
Excited to share our lab’s latest preprint! We identify DDIAS as a novel single-stranded DNA-binding component of the TOPBP1–CIP2A complex, which acts in a mitotic DNA damage response pathway to protect chromosome integrity. Short summary below, and read it here: www.biorxiv.org/content/10.1...
biorxiv.org
DDIAS is a single-stranded DNA-binding effector of the TOPBP1-CIP2A complex in mitosis
DNA double-strand breaks and unresolved DNA replication intermediates are particularly dangerous during mitosis. Paradoxically, cells inactivate canonical DNA repair mechanisms during chromosome segre...
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Daniel Durocher @durocher1.bsky.social · 10/09/2025
New work from the lab! 🔬 We report that DDIAS is a new component of the mitotic CIP2A-TOPBP1 pathway of genome maintenance. 1/n www.biorxiv.org/content/10.1...
biorxiv.org
Mitotic single-stranded DNA suppression by DDIAS
Incomplete DNA replication and chromosome breakage during mitosis pose major threats to chromosome segregation. The CIP2A-TOPBP1 complex acts to mitigate this peril, but its exact role is not yet unde...
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Cantorlab @cantorlab.bsky.social · 10/09/2025
Happy to share new work from my lab by co-authors Peng and Lee-when BRCA1 is absent, RAD51 is busy authors.elsevier.com/sd/article/S...
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Sarah Moser @sarahmoser.bsky.social · 13/08/2025
Thrilled to share our latest work, just published in @nature.com ⬇ www.nature.com/articles/s41... We discovered that PARP inhibitors 💊 trigger histone eviction from the chromatin and this creates a hidden vulnerability in PARPi resistant tumors. 🧵 (1/8)
nature.com
NASP modulates histone turnover to drive PARP inhibitor resistance - Nature
PARP inhibitor treatment triggers histone release from the chromatin in cancer cells; consequently, targeting the histone chaperone NASP renders cells vulnerable to PARP inhibition.
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Tony Cesare @thecesarelab.bsky.social · 04/08/2025
New from us in @natrevmcb.nature.com -- @szmyd-radoslaw.bsky.social & @radoncdocgee.bsky.social explore how DNA repair actively shapes cancer cell fate following DNA damage, reframing repair as both a protective process & a driver of treatment response and cell death. www.nature.com/articles/s41...
nature.com
DNA-repair-driven cell death compels us to rethink cancer therapies - Nature Reviews Molecular Cell Biology
Emerging evidence suggests that, following genotoxic therapy, it is the repair of DNA double-strand breaks, rather than the damage itself, that frequently drives cancer cell death.
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Iván Núñez Martín @ivannm97.bsky.social · 31/07/2025
Excited to share my first PhD paper published in @narjournal.bsky.social! This project was led by amazing supervisor Belén Gómez González in @aguilerloop.bsky.social lab. Thanks to all colaborators of Blanco and Diffley teams. I hope you like it! Now online here 👇🏼 academic.oup.com/nar/article/...
academic.oup.com
S-phase checkpoint protects from aberrant replication fork processing and degradation
Abstract. Replication stress, a hallmark of cancer cells, is detected by checkpoint mechanisms that trigger a range of cellular responses. Among these, the
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Pedro Leão @pedroleao.bsky.social · 16/06/2025
"In a competitive academic world, building bridges instead of walls may be our most powerful tool to accelerate discovery and rebuild public trust in science." I'm very happy with this article piece! 🥳 www.the-scientist.com/science-thri...
the-scientist.com
Science Thrives on Trust: Why Collaboration Is Our Greatest Strength
In a competitive academic world, building bridges instead of walls may be our most powerful tool to accelerate discovery and rebuild public trust in science.
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Dr. Thomas Martínez @thomasmartinez.bsky.social · 12/06/2025
These tiny proteins are super cool! 😊 www.science.org/doi/10.1126/... www.nytimes.com/2025/06/12/s...
nytimes.com
Shining a Light on the World of Tiny Proteins
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Environmental Mutagenesis and Genomics Society @emgsus.bsky.social · 03/06/2025
Join us NEXT WEEK for the #EMGS webinar "Oxidative DNA Damage and Repair: Impacts and Methods of Detection," featuring a workshop lead by Drs. Laurie Sanders and Tobias Dansen, a keynote talk by Dr. Karlene Cimprich, and more! Register Today: emgs-us.org/event/OxiDNA...
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Ed Boyden @eboyden3.bsky.social · 30/05/2025
Just published, expansion in situ genome sequencing, where you can sequence DNA while still inside the cell, mapping its organization relative to proteins and other markers, with the help of expansion microscopy! Led by @jbuenrostro.bksy.social. www.science.org/doi/10.1126/...
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altmeyerlab @altmeyerlab.bsky.social · 21/05/2025
Sharing our latest work tracking DNA damage inheritance by Live+QIBC www.nature.com/articles/s41.... Huge congrats to @apanagopoulos.bsky.social, M. Stout and all co-authors for this tour de force! Beautifully summarized by @s-j-aitken.bsky.social & E. Reilly www.nature.com/articles/d41...
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Zha Lab @zhalab.bsky.social · 17/05/2025
Excited to share our new paper on Nature - how Ku accommodates Alu expansion in primates by binding to dsRNA, providing a clue for both the high levels of Ku and its essentiality in human cells. Thank @chaolinzhang @hchung03 @LenaSteckelberg More to come www.nature.com/articles/s41...
nature.com
Ku limits RNA-induced innate immunity to allow Alu-expansion in primates - Nature
Nature - Ku limits RNA-induced innate immunity to allow Alu-expansion in primates
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Bou-Nader lab @bounaderlab.bsky.social · 14/05/2025
Happy to share yet another story back from my days as a postdoc 👇 we uncovered how the J2 antibody specifically recognizes #dsRNA. J2 is a quintessential tool used to discover #RNA, QC #RNA therapeutics and much more
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Pedro Ortega @pedroorteg.bsky.social · 29/04/2025
We describe how to perform Oligo-seq, a new method to map DNA motifs targeted by base editors. Validated with APOBEC3A and APOBEC3B, but adaptable to AID, CRISPR-Cas9, and more. 🧬 Full protocol 👉 www.sciencedirect.com/science/arti... Thanks to @buissonlab.bsky.social at @ucirvine.bsky.social!
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Pedro Ortega @pedroorteg.bsky.social · 16/04/2025
Our latest study from my postdoctoral work has just been published in Science Advances! Grateful to my mentor and collaborators who made it possible! @buissonlab.bsky.social @ucirvine.bsky.social 🔗 www.science.org/doi/10.1126/...
science.org
Mechanism of DNA replication fork breakage and PARP1 hyperactivation during replication catastrophe
Upon ATR inhibition, APOBEC3B targets unprotected single-stranded DNA at replication forks, leading to fork breakage.
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Debbie Caswell @caswelldrm.bsky.social · 07/04/2025
I am excited to announce that my laboratory @ucl.ac.uk is now open! We are hiring so please contact us if you are interested. www.caswelllaboratory.com
caswelllaboratory.com
Lung Cancer Prevention Laboratory
Pioneering research in lung cancer to improve diagnosis, treatment and prevention
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Pedro Ortega @pedroorteg.bsky.social · 07/04/2025
Glad to see our PACT preprint published in @naturecomms.bsky.social! "Cooperative role of PACT and ADAR1 in preventing aberrant PKR activation by self-derived double-stranded RNA" Another step forward in understanding innate immunity. @buissonlab.bsky.social 🔗 www.nature.com/articles/s41...
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Rosado lab @rosadolab.bsky.social · 27/03/2025
Thrilled to share our latest work. Great collab with Costanzo, Masson, Freire and Reyes' labs. Congrats to María José and coauthors HMCES corrupts replication fork stability during base excision repair in homologous recombination–deficient cells | Science Advances www.science.org/doi/10.1126/...
science.org
HMCES corrupts replication fork stability during base excision repair in homologous recombination–deficient cells
HMCES binding to nascent DNA blocks replication and kills homologous recombination–deficient cancer cells.
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