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Natalia Favila

@nataliafavila.bsky.social
241 followers 465 following 3 posts

Postdoc at DZNE Bonn | Computational Neuroscience | Data Science | Basal Ganglia | Border collies 🐶 🐶

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Reposted by Natalia Favila
Earl K. Miller @earlkmiller.bsky.social · 04/10/2026
To understand the brain, we need to study groups of neurons, not individual cells alone. These groups form distinct “subspaces,” allowing different downstream areas to extract the information they need. Beyond single-cell sensory representations in cortex doi.org/10.1016/j.co... #neuroscience
doi.org
Redirecting
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Rachel Donka @racheldonka.bsky.social · 27/09/2026
🚨New paper alert: Excited to share our journey to contrast how multiple dopamine sensors respond to acute morphine treatment. We first compared changes in dopamine transients in rats prepared with VTA DA GCaMP6f, NAcLS dLight1.3b or GRABDA2h 1/5
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bioRxiv Neuroscience @biorxiv-neursci.bsky.social · 24/09/2026
Cholinergic interneurons in the nucleus accumbens regulate the initiation of natural reward approach www.biorxiv.org/content/10.64898/20…
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Jeremiah Cohen @jeremiahycohen.bsky.social · 13/04/2026
Delighted to share our discoveries about one of the brain's neurotransmitter systems: www.biorxiv.org/content/10.6... Together with colleagues at the @alleninstitute.org, we have learned a lot about a tiny cluster of neurons in the brainstem locus coeruleus (LC) that releases norepinephrine (NE). 1
biorxiv.org
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adamezracohen.bsky.social @adamezracohen.bsky.social · 10/09/2026
We wrote a tutorial guide on voltage imaging, now out in Neuron: authors.elsevier.com/a/1nlgh3BtfH... Indicators, microscopes, and software have all advanced to the point that it's not so hard -- you can now directly watch the electrical activity of neurons in live animals or in culture.
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Adrian Liston @labliston.bsky.social · 08/09/2026
"The Professor, The Pipette, and the Path Not Taken" finds readers working in cutting-edge research, developing spin-out companies, becoming a professor or leaving science altogether. The hundreds of paths through the book lead to a range of alternative endings. biologist.rsb.org.uk/adrian_listo...
biologist.rsb.org.uk
‘Whether you go the hard or easy way, you can end up in the same place’
An interview from the RSB with author Adrian Liston on his new science career book
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Reposted by Natalia Favila
Mark D Humphries @markdhumphries.bsky.social · 08/09/2026
Terrific piece from @mattperich.bsky.social on how to think about the dimensionality of neural activity Will be borrowing the excellent folding paper analogy… www.thetransmitter.org/neural-dynam...
thetransmitter.org
Dimensionality—neuroscience’s red herring?
Placing too much emphasis on a specific interpretation of dimensionality may lead neuroscience down the wrong path.
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Sabine Krabbe @sabinekrabbe.bsky.social · 07/09/2026
Amygdala dopamine is often studied in response to external rewards or threats. But what happens during self-initiated exploration? Our new preprint suggests a broader role: a state-dependent salience signal linking exploration and associative learning. 👉 www.biorxiv.org/content/10.6...
biorxiv.org
Basolateral amygdala dopamine signals behavioural salience across exploration and learning
Animals must balance exploration with threat avoidance, yet how neuromodulatory signals shape information-seeking states remains unclear. Using fibre photometry recordings in the basolateral amygdala ...
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Matteo Carandini @carandinilab.net · 04/09/2026
Brainwide Representation of Navigation Enny recorded >20k neurons across forebrain and midbrain while mice navigated 1D VR. She found that every region encodes spatial position! Hippocampal formation stands out only in uniformity of the representation. But visual cortex beats it in precision...
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Elle Cordova @ellecordova.bsky.social · 03/09/2026
Rough Draft vs Final Draft
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Kenneth Amaya, PhD @kenam15.bsky.social · 02/09/2026
Attention all central amygdala aficionados and habit learning lovers: Sharing the latest work from my time at Dartmouth where we examined CeA activity during habit formation, now out at JNeuro www.jneurosci.org/content/earl...
jneurosci.org
Habit learning shapes activity dynamics in the central nucleus of the amygdala
A habit develops as a motivated behavior that is strengthened by extended experience and feedback. While the performance component of a habit is relatively well studied, being linked to action-related...
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Spencer LaVere Smith @spencerlaveresmith.bsky.social · 27/08/2026
The scale and brazenness is breathtaking. Fantastic work in this blog post. Just take a moment and look at the figures! Even if you don’t typically use antibodies in your own work, you’ve probably cited papers that have. This is fraud on a staggering scale spanning many companies.
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Drew Schreiner @schreinerdrew.bsky.social · 20/08/2026
Grab-Da + Venus–iGluSnFR + sRGECO, 3-color photometry
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Matteo Carandini @carandinilab.net · 17/08/2026
I am proud of this paper. Since it came out in 2022 it has received 0 citations (yes that's a zero). But multiple young scientists have found it useful! (from other labs, so they were not coerced...). Perhaps you will find it useful too? SOME TIPS FOR WRITING SCIENCE doi.org/10.1523/ENEU...
doi.org
Some Tips for Writing Science
When preparing a scientific paper, we typically write with coauthors who have different backgrounds and styles, and we target readers who have little time and patience. To help both readers and writer...
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Vincent Breton-Provencher @vincentbp.bsky.social · 17/08/2026
Happy to share this new paper from the lab. www.sciencedirect.com/science/arti...
sciencedirect.com
Region-specific weighting of sensory intensity and reward prediction error by dopamine signals
Growing evidence shows that dopamine signaling is diverse, with dopaminergic neurons responding to rewarding and aversive stimuli. Here, we hypothesiz…
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Nature Methods @natmethods.nature.com · 06/08/2026
CellTune: high-precision analysis of spatial proteomics data via human-in-the-loop active learning. www.nature.com/articles/s41...
nature.com
CellTune: an integrative software for accurate cell classification in spatial proteomics - Nature Methods
CellTune enables high precision analysis of spatial proteomics datasets through a human-in-the-loop active learning workflow.
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Reposted by Natalia Favila
Dr. Cate Peña @cate-cholamine.bsky.social · 07/08/2026
So proud to have “Early-life stress alters H3K4me1 in VTA to prime stress sensitivity” out now in Neuron! This work spanned Many years and Many people contributed. Huge thanks to @hyejaykim.bsky.social, @ja-balouek.bsky.social, Luke Geiger, and Meaghan Creed www.cell.com/neuron/fullt...
cell.com
Early-life stress alters H3K4me1 in VTA to prime stress sensitivity
Kim, Geiger et al. report that early-life stress increases the chromatin modification H3K4me1 and its enzymatic writer, SETD7, in the ventral tegmental area. They show that this form of epigenetic pri...
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Neuropsychopharmacology @npp-journal.bsky.social · 07/08/2026
This study found opposing effects of fentanyl on tonic vs. phasic dopamine that may reveal insight on impaired non-drug reward seeking during opioid exposure
nature.com
Acute fentanyl induces opposing directions of changes in tonic and phasic dopamine release patterns and impairs Pavlovian task performance
Neuropsychopharmacology - Acute fentanyl induces opposing directions of changes in tonic and phasic dopamine release patterns and impairs Pavlovian task performance
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Reposted by Natalia Favila
Nature Methods @natmethods.nature.com · 05/08/2026
An Analysis from @ptrrupprecht.bsky.social et al investigates the behavior of GCaMP8 variants in spike inference using different algorithms. www.nature.com/articles/s41...
nature.com
Spike inference from calcium imaging data acquired with GCaMP8 indicators - Nature Methods
In this Analysis, Rupprecht et al. investigate the behavior of GCaMP8 variants in spike inference using several different algorithms. They highlight the role of the indicators’ linearity in the infere...
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Rebekah Evans @cellularscale.bsky.social · 05/08/2026
This paper was a LONG time coming! We functionally mapped excitatory and inhibitory inputs onto dopamine neuron dendrites using spatial optogenetics.
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Matt Wanat @mattjwanat.bsky.social · 27/07/2026
Check out the new preprint from the lab led by Brandon Garcia-Castañeda! Huge shout out to NIH/NIDA for initially funding this line of research and continuing to support this work in a new R21/R33 with @asoshnev.bsky.social! www.biorxiv.org/content/10.6...
biorxiv.org
Ventral tegmental area astrocytes regulate drug-cue associations and drug intake
Cocaine use disorder remains a critical public health concern with limited treatment options. Astrocytes are increasingly recognized as active regulators of neurotransmission and are emerging as impor...
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turrigiano.bsky.social @turrigiano.bsky.social · 25/07/2026
this reasoning generalizes across business/academic/science sectors. Where it can be net useful (e.g. coding) it requires extensive benchmarking and needs to be deployed by an expert
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Harmit Singh Malik @harmitmalik.bsky.social · 20/07/2026
I wish I did not have to bring up this old tweet from ‘that other place’ every now and again but here we are (again) and here it is…
A reminder: the scientific accomplishments of serial sexual harassers do not make up for the grievous injury caused to science & young scientists over generations (even if this were a simple math argument which... WTF!). This 'genius myth' protects such folks in the first place.
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Virginia Helena @v-helena.bsky.social · 28/06/2025
#Anxiety: review outlines how intricate #braincircuits - from the amygdala and BNST to the lateral habenula - coordinate anxiety-like behaviors. It maps layered #neuralcontrol and offers insights for precision-targeted #treatments. #Neuroskyence #Medsky #Neuro #Behavior
doi.org
Frontiers | Research progress on the neural circuits mechanisms of anxiety
Anxiety disorders, as a critical mental health issue, profoundly impact an individual’s quality of life and social participation while imposing a considerabl...
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Rafiq Huda @brainsonmymind.bsky.social · 04/06/2026
Excited to share the newest work from the lab, examining the role of dorsal striatum astrocytes and neurons in alcohol stimulation. Huge congrats to superstar postdoc @cherishardinger.bsky.social and the team on this beautiful work! www.biorxiv.org/cgi/content/...
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Daniel Castro @flanbrain.bsky.social · 01/06/2026
First Castro Lab paper, brought to you by the hard work of Dr. Kathryn Braden @katybraden.bsky.social In this manuscript we investigate the role of endogenous enkephalin or dorsal raphe nucleus. We find that it is incredibly important for buffering negative affect 😱 www.nature.com/articles/s41...
nature.com
Dorsal raphe nucleus enkephalin peptide modulates behavioral preference - Neuropsychopharmacology
Neuropsychopharmacology - Dorsal raphe nucleus enkephalin peptide modulates behavioral preference
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The Transmitter @thetransmitter.bsky.social · 01/06/2026
A hackathon reveals that disagreement in neuroscience runs deeper than most researchers suspect—even in electrophysiology, a field that prides itself on hard data, write @mattiachini.bsky.social and Gaelle Chapuis. #neuroskyence www.thetransmitter.org/reproducibil...
thetransmitter.org
18 teams analyzed a neuro dataset and got different answers
Disagreement in neuroscience runs deeper than most researchers suspect—even in electrophysiology, a field that prides itself on hard data.
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Ian Kremer @wolverinebear.bsky.social · 21/05/2026
Dopamine Deficiency Found to Drive Memory Impairment in Alzheimer's Disease www.tohoku.ac.jp/en/press/dop... #Alzheimers #dementia #Parkisons #neurology #science #neuroscience #NeuroSkyence
tohoku.ac.jp
Dopamine Deficiency Found to Drive Memory Impairment in Alzheimer's Disease
The discovery potentially opens the door to new therapeutic means that could reverse cognitive decline in millions of Alzheimer's sufferers across the globe.
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Melanie Mitchell @melaniemitchell.bsky.social · 21/05/2026
"Science is not simply a sequence of tasks that can be optimized....The scientific system thrives on inefficiency: redundant efforts, failed attempts, and divergent paths. These are not costs to be eliminated but sources of discovery." Excellent essay! ⬇️ www.science.org/doi/10.1126/...
science.org
Progression without progress
Progress in the use of artificial intelligence (AI) to advance scientific discovery has made it increasingly realistic to envision automated “end-to-end science” (ETES) systems: integrated pipelines t...
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Fabien Naneix @fabnaneix.bsky.social · 22/05/2026
New review on Dopamine ensembles regulating appetite, feeding, and energy homeostasis now available in Trends in Endocrinology & Metabolism. Thank you @peppeganga.bsky.social for the invite, and to Oriane Onimus and @katepeters3.bsky.social for their fantastic work www.cell.com/trends/endoc...
cell.com
Dopamine ensembles regulating appetite, feeding, and energy homeostasis
Beyond its classical role in gating reward processes, dopamine (DA) also contributes to the orchestration of feeding and energy balance. This review synthesizes and discusses recent advances in unders...
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Armin Lak @laklab.bsky.social · 22/05/2026
Awesome results from @fluketc.bsky.social @dudman.bsky.social and team, both for dopamine field and for all that train animals in tasks www.science.org/doi/10.1126/...
science.org
Reward magnitude determines reinforcement learning efficiency
Standard animal learning studies minimize individual reward magnitudes to maximize the repetitions of reinforced behaviors. We investigated how reward magnitude influences initial learning across five...
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Aligning Science Across Parkinson's @asapresearch.parkinsonsroadmap.org · 21/05/2026
#ParkinsonsDisease is not uniform - it varies widely in symptoms, progression, and underlying biology. A new blog explores how PD Heterogeneity teams are mapping these differences to better understand what drives the disease, and move toward more precise treatments. 🔗 bit.ly/4dY59ok
Graphic featuring a circular illustration of diverse human silhouettes in profile, layered in glowing blue and purple tones against a dark background. To the right, bold text reads: “Mapping Parkinson’s Disease Heterogeneity to Accelerate Discovery,” with “Accelerate Discovery” highlighted in blue. The Collaborative Research Network (CRN) logo appears in the top right corner.
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Nature @nature.com · 21/05/2026
Nature research paper: Dopamine drives persistent remodelling of the maternal brain go.nature.com/498NdVA
go.nature.com
Dopamine drives persistent remodelling of the maternal brain - Nature
Brain-wide transcriptomic profiling in mice reveals that reproductive experience remodels the maternal brain by altering dopamine dynamics in the dorsal hippocampal formation, causing dopamine-dependent histone post-translational modifications, and thereby changes in gene expression and behaviour.
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Luca @lucagalletti.bsky.social · 18/05/2026
Living his best life 🎉🎈 TT: finn_e_bear
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Madelyn Hjort @mmhjort.bsky.social · 06/05/2026
Thrilled to share our work out in @nature.com today! Linking flexibility modeling, single-cell imaging, and targeted optogenetics allowed us to characterize how some prefrontal neurons, and mPFC-VTA neurons in particular, drive contingency degradation behavior. www.nature.com/articles/s41...
nature.com
Prefrontal to ventral tegmental area dynamics drive contingency degradation - Nature
This work provides a mechanistic understanding of how certain prefrontal circuits in the rodent brain permit flexibility to selectively stop learned behaviours through interactions with core subcortic...
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Talia Lerner @talialerner.bsky.social · 12/05/2026
🚨Exiting new preprint from Lerner Lab postdoc AJ Miller-Hansen examining the thalamus as a physiological driver of local, acetylcholine-dependent dopamine release! 🚨 DA-ACh interactions have been 🔥but what’s really going on in vivo? We think we have some answers. #neuroskyence🧪
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SfN Journals @sfnjournals.bsky.social · 19/03/2026
#JNeurosci: Gallello et al tested if DA conveying RPEs in the service of Reinforcement Learning are directly applied to regions, like MFC. Results suggest DA signals don't serve a universal function, but conform to support functions of each local region doi.org/10.1523/JNEUROSCI.1454-25.2…
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Fabrizio Musacchio @fabmusacchio.bsky.social · 06/05/2026
Oh wow that looks pretty promising!
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Guido Meijer @guidomeijer.com · 07/05/2026
Are you interested in serotonin receptors? I made a website which visualizes the expression of different 5-HT receptors! Data from the Allen Brain Atlas (@alleninstitute.org) website by the IBL Brain Viewer (@intlbrainlab.bsky.social). atlas.internationalbrainlab.org?buckets=meij... Instructions 👇
atlas.internationalbrainlab.org
IBL Brain Atlas
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bioRxiv Neuroscience @biorxiv-neursci.bsky.social · 08/05/2026
Learning shapes neural codes for sensory-motor integration in the tail of the striatum www.biorxiv.org/content/10.64898/20…
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bioRxiv Neuroscience @biorxiv-neursci.bsky.social · 09/05/2026
Thalamus orchestrates local acetylcholine-dependent dopamine release in the learning striatum www.biorxiv.org/content/10.64898/20…
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Neuron @cp-neuron.bsky.social · 08/05/2026
dlvr.it
A global dopaminergic learning rate enables adaptive foraging across many options
Grima et al. introduce a novel foraging paradigm to understand how mice can rapidly learn to exploit multi-option environments with varied reward statistics. Decision-making is explained by a model integrating optimal foraging, reinforcement learning, and machine learning. Mesolimbic dopamine best reflects the dynamic global learning rate of the model.
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Ian Kremer @wolverinebear.bsky.social · 06/05/2026
Tracking the turning point in Alzheimer’s disease: A blood biomarker reveals the mechanistic shift from amyloid to tau pathology www.science.org/doi/10.1126/... #Alzheimers #dementia #biomarkers #science #neuroscience #NeuroSkyence
science.org
Tracking the turning point in Alzheimer’s disease
A blood biomarker reveals the mechanistic shift from amyloid to tau pathology
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Stina Börchers, PhD @stinaborchers.bsky.social · 07/05/2026
🧠🍽️ Oral small-molecule GLP-1R agonists suppress hedonic feeding via a discrete CeA neuronal population that dampens dopamine release in the nucleus accumbens. Distinct from hypothalamic satiety circuits 👀 www.nature.com/articles/s41... #science #neuroskyence #ingestivebehavior
nature.com
A brain reward circuit inhibited by next-generation weight-loss drugs in mice - Nature
Humanized glucagon-like peptide 1 receptor (GLP1R) mouse models are used to investigate the neural circuitry through which small-molecule GLP1R agonists modulate feeding, with implicati...
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The Transmitter @thetransmitter.bsky.social · 04/05/2026
When writing a grant or reasoning about a problem, artificial intelligence can exert a subtle bias that often goes undetected, even when we’re doing our best to be aware of it, writes Tim Requarth. #neuroskyence www.thetransmitter.org/from-bench-t...
thetransmitter.org
Why expertise won’t protect you from AI’s influence
When writing a grant or reasoning about a problem, AI can exert a subtle, often undetected bias, even when we’re doing our best to be aware of it.
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Eva de la Serna @sciencedoodles.bsky.social · 04/05/2026
2 wks left to apply to join #BoBiAC2026! This course will teach you how to use Python to segment fluorescence images w/tools like @ilastik-team.bsky.social & CellposeSAM, & even how to measure cell features, neighborhood relationships, & colocalization. No coding experience needed! bobiac.github.io
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Ana Pineda, PhD @anapineda.bsky.social · 04/05/2026
To all the recovering perfectionists out there! 📷 of the amazing shopsundae (check Instagram) #MondayMotivation buff.ly/kpAOHXW #AcademicSky #ECRchat #WomeninSTEM #AcWri #Postdoc #NewPI
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Jan Gründemann @jangrundemann.bsky.social · 03/05/2026
Multimodal alignments of in vivo imaging and spatial biology datasets at cellular resolution www.biorxiv.org/content/10.6...
biorxiv.org
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Rebekah Evans @cellularscale.bsky.social · 01/05/2026
Our newest preprint shows sex specific effect of exercise on motor coordination and dopamine neuron excitability! This was actually really surprising to us.
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Russ Poldrack @russpoldrack.org · 30/04/2026
Another week, another credential-leaking Python package: semgrep.dev/blog/2026/ma...
semgrep.dev
Shai-Hulud Themed Malware Found in the PyTorch Lightning AI Training Library
The PyPI package lightning was compromised in versions 2.6.2 and 2.6.3 with Mini Shai-Hulud themed malicious code to execute credential-stealing malware on import.
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