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stephanwimmi.bsky.social

@stephanwimmi.bsky.social
296 followers 644 following 3 posts

Postdoc in the Lab of Berenike Maier @maierlab.bsky.social, IBP Cologne. Type 4 Pili, Micro-colonies Formerly @Diepold-Lab.bsky.social at MPI Marburg(now KIT Karlsruhe). T3SS, spatial temporal organisation

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Susan Schlimpert @s-lab.bsky.social · 25/08/2026
It is happening, and registration is open for the EMBO Workshop: Bacterial and archaeal cell division: diverse mechanisms and models. 20–23 April 2027 | Barga, Italy. Come and join us @awehenkel.bsky.social, @seamusholden.bsky.social, @s-lab.bsky.social ! Deadline: Jan 6, 2027. #Bacdiv27
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Wiep Klaas Smits (ExpBac/CMAT) @smitslab.bsky.social · 29/09/2026
Flagellar toxicity: Flagellar synthesis is lytic for Bacillus subtilis in the absence of PBP1 | PNAS www.pnas.org/doi/10.1073/...
pnas.org
Flagellar toxicity: Flagellar synthesis is lytic for Bacillus subtilis in the absence of PBP1 | PNAS
Flagella are large transenvelope nanomachines but how they transit the peptidoglycan in gram-positive bacteria is poorly understood. A recent model...
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GBM (Gesellschaft für Biochemie und Molekularbiologie) @gbmev.bsky.social · 21/09/2026
Save the date - 78. Mosbacher Kolloquium idw-online.de/de/news877688
idw-online.de
78. Mosbacher Kolloquium vom 17. - 20. März 2027
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Jennifer Goff, PhD @jlgoff.bsky.social · 21/09/2026
journals.asm.org/doi/10.1128/... Excited to share this new paper from my lab! We looked at how decades of prescribed fire influence N-cycling in the Albany Pine Bush Preserve. This project and field work were designed and implanted by one undergrad in my lab & the analysis & writing by another. 🧵
journals.asm.org
Prescribed burns drive lasting changes in soil nitrogen cycling and microbial function | mSystems
Prescribed fire is widely used by land managers to reduce wildfire risk and promote biodiversity. While the effects of fire on aboveground processes are well understood, much less is known about how r...
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Willem van Schaik @wvschaik.bsky.social · 21/09/2026
Fascinating preprint on the recent Kent MenB outbreak 'Emergence of short-lived meningococci causing focal epidemics can be associated with gene transfer from carriage-associated Neisseria' www.biorxiv.org/content/10.6...
biorxiv.org
Emergence of short-lived meningococci causing focal epidemics can be associated with gene transfer from carriage-associated Neisseria
In March 2026, an unusually large outbreak of invasive meningococcal disease (IMD) in Kent, UK, was linked to attendance at one nightclub over a single weekend. The outbreak organism was a Neisseria m...
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WeberLab@McGill @weber-lab.bsky.social · 21/09/2026
🚨We're hiring!!🚨 @biomcgill.bsky.social is looking for a Quantitative Cell Biologist to join our diverse and interdisciplinary community. Please share this ad broadly, and reach out if you have any questions. mcgill.wd3.myworkdayjobs.com/en-US/McGill...
mcgill.wd3.myworkdayjobs.com
Assistant Professor in Quantitative Cell Biology - Department of Biology
Please refer to the How to Apply for a Job (for External Candidates) job aid for instructions on how to apply. If you are an active McGill employee (ie: currently in an active contract or position at ...
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Ákos T Kovács @evolvedbiofilm.bsky.social · 16/09/2026
Cristina Colomer-Winter @colomer-winter.bsky.social (from the lab of @kimingeneva.bsky.social) on A two-component system signaling hub controls enterococcal membrane remodeling in response to daptomycin LiaR in Enterococcus #EMBOBacNet
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Microbes.Info @microbesinfo.bsky.social · 24/08/2026
👍
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Helmholtz Institute Würzburg @helmholtz-hiri.bsky.social · 18/09/2026
⏰ Reminder: The deadline is on Monday! Apply by September 21 for one of two junior professorships. Learn more in the thread below. 🧵👇
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Ákos T Kovács @evolvedbiofilm.bsky.social · 15/09/2026
Andreas Diepold on Coupling of adhesion and type VI secretion drives a lifestyle switch in Yersinia enterocolitica see their preprint: doi.org/10.6084/m9.f... #EMBOBacNet
figshare.com
An integrated type VI secretion / type I fimbriae system co-regulates attachment and secretion as part of a two component system-regulated bacterial lifestyle switch
Type VI secretion systems (T6SS) allow bacteria to inject effector proteins into neighboring cells. While these systems can target a wide range of cell types, they require direct contact with their target cells. Although attachment is therefore essential for the successful injection of effectors, the coordination of secretion and attachment remains poorly understood. The single T6SS of Yersinia enterocolitica is encoded across two neighboring operons, both of which harbor genes for type I fimbriae. While the system is inactive under standard laboratory conditions, it is activated by a single nucleotide polymorphism in the histidine kinase of a two-component system. Beyond the integrated T6SS/T1F system, this strain displays strong upregulation of other attachment systems and a concurrent drastic downregulation of flagella and chemotaxis, indicating a switch from a motile, planktonic lifestyle to an adherent, secretion-active state. Transmission electron and fluorescence microscopy revealed increased pilus production and a dense arrangement of T6SS structures. Proteomics analyses enabled us to delineate the regulons involved in this lifestyle switch and to identify a T6SS effector nuclease. Given that the genetic arrangement is conserved in various pathogenic bacteria, the integration of T6SS and fimbrial attachment systems and the genetic switch described herein may be a common feature allowing bacteria to adapt to changing conditions.
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Anthony Vecchiarelli @cellforganized.bsky.social · 13/04/2026
New preprint from the Vecchiarelli Lab! 🧵 Congratulations to first author Dr. Claire Dudley! @claire-dudley.bsky.social Claire uncovered a critical player in the organization for the photosynthetic cytoplasm of cyanobacteria - polyphosphate! #polyP www.biorxiv.org/content/10.6...
biorxiv.org
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Molecular Microbiology @molmicrounihoh.bsky.social · 03/08/2026
Schon wieder ein interessantes c-di-AMP-Manuskript: A c-di-AMP-controlled glutamine synthesis pathway promotes persistence of Staphylococcus aureus thymidine-dependent small colony variants in the lung! www.biorxiv.org/content/10.6... found by @joergstuelke.bsky.social !
biorxiv.org
A c-di-AMP-controlled glutamine synthesis pathway promotes persistence of Staphylococcus aureus thymidine-dependent small colony variants in the lung
Children with cystic fibrosis (CF) commonly harbor Staphylococcus aureus thymidine-dependent small-colony variants (TD-SCVs), which are associated with reduced lung function and increased respiratory ...
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Bob Wong @bbmwong.bsky.social · 11/08/2026
Are you an ecologist/evolutionary biologist looking for an ongoing academic position? Monash University’s School of Biological Sciences is hiring! Come join us in Melbourne, Australia! Details here: careers.pageuppeople.com/513/cw/en/jo...
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Jan-Willem Veening @veeninglab.com · 04/08/2026
New preprint! #MicroSky Led by @ayaiizuka.bsky.social & Maria Vittoria Mazzuoli, we ask what helps Staphylococcus aureus enter, survive inside and evade treatment in human monocytes. www.biorxiv.org/content/10.6...
biorxiv.org
Staphylococcus aureus Mnh1 cation–proton antiporter promotes phagocytic uptake and intracellular survival in human monocytes
While Staphylococcus aureus is predominantly an extracellular human commensal, it can also exhibit an intracellular lifestyle that enables its persistence within diverse host cell types, including mon...
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Kai Kupferschmidt @kakape.bsky.social · 01/07/2026
“It’s just a microscopic water droplet surrounded by a fatty membrane and stuffed with chemicals and snippets of DNA encoding a mere 36 genes. But it’s also arguably the closest researchers have come to building a living cell from scratch.”🧪 My story in @science.org on a fascinating preprint:
science.org
Lab-created ‘SpudCell’ marks ‘stunning’ step toward building life from scratch
A synthetic cell can now grow and divide—but it’s still far from alive
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Laura K. Jennings @laurakjennings.bsky.social · 29/06/2026
📢 We're hiring! The Department of Microbiology & Cell Biology at Montana State University is hiring an Assistant Professor of Microbiology. We welcome applicants working in microbial pathogenesis, immunology, genetics, microbial evolution, and related areas. Apply: jobs.montana.edu/postings/52009
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Melanie Blokesch @mblokesch.bsky.social · 29/03/2026
Open postdoc position in my lab on HGT and interbacterial competition. We seek candidates with a PhD in microbiology (or related fields)+ strong 1st-author publications. Curious, highly motivated, and dedicated team players ready to contribute fully are encouraged to apply. Details: tiny.cc/cz01101
tiny.cc
Open Positions
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John Innes Centre @johninnescentre.bsky.social · 26/06/2026
PRESS RELEASE - Rings of power – how bacteria use circadian clocks to colonise their world Research has revealed how bacteria rely on circadian clocks to control the spread of their multi-cellular colonies.  www.jic.ac.uk/press-releas... 1/3
jic.ac.uk
Rings of power – how bacteria use circadian clocks to colonise their world | John Innes Centre
Research has revealed how bacteria rely on circadian clocks to control the spread of their multi-cellular colonies…
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Juan C. Landoni @jclandoni.bsky.social · 24/04/2026
We're hiring! 🔬🏔️ Looking for curious, open-minded, and multidisciplinary #PhD candidates to research at the intersection of #mitochondria, #metabolism, #imaging & #physiology, with the #Alps as a backdrop. Sounds like you or someone you know? Link below! @fbm-unil.bsky.social @unil.bsky.social
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VAAM e.V. @vaam-microbes.bsky.social · 13/05/2026
We're happy to host the 25. Industry-Academia Panel – 25 times building bridges between science and academia ✨ Join us to celebrate this milestone 🚀 🎯 „Process Development – From Lab to Scale“ 📅 Thu, 21 May 2026, 4pm 👉 t1p.de/rqk1z #VAAM #IndustryAcademia #ProcessDevelopment #Biotechnology
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VAAM e.V. @vaam-microbes.bsky.social · 13/05/2026
📢 Next Meeting VAAM Young Scientist Network 🎯 Funding Your Research: Opportunities and Strategies 🗓️ May 21, 2:00 pm, online 📝 Registration t1p.de/w89jg From grants to fellowships — come explore your funding options with us. Spread the word & see you there! #VAAM #YoungScientists #ResearchFunding
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Juan C. Landoni @jclandoni.bsky.social · 21/04/2026
The Landoni Lab opens this summer at UNIL! @fbm-unil.bsky.social 🔬 Quantitative #imaging + systems biology to decipher how #metabolic architecture & #mtDNA dynamically shape tissue development, #aging and #mitodisease. Beyond excited to fire up the lasers, open positions soon! 🧪 #mitochondria #newPI
Landoni lab & UNIL logos, featuring fluorescent images of mitochondria and nematodes
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VAAM e.V. @vaam-microbes.bsky.social · 14/04/2026
PhD student or postdoc in microbiology? 🔬🦠 We are opening a new round of our career orientation program VAAMentoring – Get matched with an experienced scientist 👨‍🔬👩‍🔬 to help you find your direction🎯 Apply by May 15, 2026 More info🔗 t1p.de/2iamo #microbiology #mentoring #VAAM #PhDlife #Postdoc
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Andreas Keller @akellergew.bsky.social · 14/04/2026
Morgen, 10:30 Uhr: Öffentliche Anhörung des Forschungsausschuss zum #WissFG, auch im Livestream - ich bin als Sachverständiger dabei 🥳 👉 www.bundestag.de/ausschuesse/... Mein Ansatz: Gute Arbeitsbedingungen und faire Gehälter für alle - her mit dem #Tarifvertrag! #IchBinHanna #NotMyWissZeitVG
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Khaled_Selim Lab @selimlab.bsky.social · 15/04/2026
#joboffer #Germany plz spread it I'm hiring a Junior leader (E13; 100% for 3-5 y) to start own independence w/ focus on #CryoEM SPA or ET Ideally 1-2y postdoc experience Plz get in touch, if you are interested in #Structural biology & #MicroBiochem @sfb1381.bsky.social @vaam-microbes.bsky.social
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Nature @nature.com · 17/03/2026
AlphaFold database now includes 1.7 million 'homodimers' - comprising two interacting strands of the same molecule go.nature.com/4cSmbnT
go.nature.com
AlphaFold hits ‘next level’: the AI tool now includes protein pairing
The database of 200 million protein-structure predictions now includes homodimers, adding new biological relevance.
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Prof Jenny Rohn @jennyrohn.bsky.social · 20/03/2026
The video you need right now: dancing #ISS astronauts in low gravity!
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Nichole Broderick, PhD @nabroderick.bsky.social · 20/03/2026
Excited to announce our new journal from @isme-microbes.bsky.social ISME Host Microbe is live and now accepting submissions. Look forward to receiving your papers! #Microsky 🧫 🦠
Image of the cover of the 1st volume of ISME Host Microbe a new official journal of the International Society for Microbial Ecology. Cover images shows a plant stomata with bacteria around and entering.
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 02/03/2026
New in JB: Smith, Unnikrishnan et al. connect daptomycin sensitivity to the staphylococcal type VII secretion system protein EsxC via changes in the membrane, linking pathogenesis to Abx sensitivity. journals.asm.org/doi/10.1128/... @asm.org #JBacteriology
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VAAM e.V. @vaam-microbes.bsky.social · 26/01/2026
✨Save the Date ✨ Connect with fellow early-career microbiologists & start new collaborations🤝: Meeting of the #VAAM Young Scientist Network: "Establishing Collaborations within the Network" 📆 13.02.2026 ⏲️ 2 pm 🔗https://t1p.de/hmbhw #EarlyCareer #Networking #Microbiology #YoungScientists
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VAAM e.V. @vaam-microbes.bsky.social · 06/02/2026
✨ We've just joined Instagram! ✨Follow us there for news, updates and insights from #VAAM 📸 www.instagram.com/vaam_microbes/
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Séamus Holden 🔬🦠🧫 @seamusholden.bsky.social · 02/02/2026
iCASE PhD project available in my lab, combining microscopy method development with high throughput screening of bacteria. Applications to antibiotic drug discovery and screening for new cell division proteins. Collaboration with Cairn Research #microsky #bioimaging www.findaphd.com/phds/project...
findaphd.com
Image-based bacterial phenotyping and antimicrobial drug discovery using smart high-throughput super-resolution microscopy at University of Warwick on FindAPhD.com
PhD Project - Image-based bacterial phenotyping and antimicrobial drug discovery using smart high-throughput super-resolution microscopy at University of Warwick, listed on FindAPhD.com
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EMBL-EBI @ebi.embl.org · 02/02/2026
Meet Leonie Johanna Lorenz 🇩🇪, a Predoctoral Fellow at EMBL-EBI who is bringing mathematical modelling to microbes. Find out more about how Leonie’s passion for modelling patterns extends from bacterial evolution to sewing 🧵 www.ebi.ac.uk/about/news/p...
Person standing outside next to a building wearing a red jacket
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CRBM-Montpellier @crbm-montpellier.bsky.social · 30/01/2026
We are hiring!
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Marco Fumasoni @marcofumasoni.bsky.social · 02/02/2026
Now with the final graphic ✨ Beautiful artwork by Sonia Monti (scientific-visualization-solutions.com). Design by @embo.org 🧬 The Rules of the Game 📍 @gimmfoundation.bsky.social, Oeiras (PT) | June 2–5, 2026 🗓️ Register by March 1st 👉 meetings.embo.org/event/26-cel...
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Nature Microbiology @natmicrobiol.nature.com · 31/01/2026
nature.com
Effector–host interactome map links type III secretion systems in healthy gut microbiomes to immune modulation
Nature Microbiology, Published online: 26 January 2026; doi:10.1038/s41564-025-02241-yLarge-scale computational and in vitro analyses identify commensal type III secretion systems and substrates in the human gut microbiome that can interact with human proteins to modulate immune pathways.
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Maier Biophysics Lab @maierlab.bsky.social · 16/01/2026
Preprint:INSIDE OUT! Experimentally and via computational modelling, we showed that chemical gradients in late-stage N.gonorrhoeae microcolonies induce spontaneous symmetry breaking. Like a jet, the inner core flows towards the periphery, leading to a global eversion and the dissemination of cells.
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MPI Dortmund @mpi-dortmund.bsky.social · 07/01/2025
First paper 2025🎇 Multistate kinetics of the syringe-like injection mechanism of Tc toxins - published by Enrica Bordignon & @raunser-lab.bsky.social in @science.org Advances #CryoEM www.science.org/doi/10.1126/...
science.org
Multistate kinetics of the syringe-like injection mechanism of Tc toxins
Tc toxins perforate cells via a multistep process involving three intermediates, modulated by lipids, receptors, and pH.
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Raunser lab @raunser-lab.bsky.social · 15/01/2026
Our new movie is online, highlighting the assembly, secretion and mechanism of action of bacterial Tc toxins. We hope you enjoy it and use it for teaching purposes or just for fun. Nature is fascinating! www.youtube.com/watch?v=UfEf...
youtube.com
How bacterial Tc toxins work: secretion, pore formation and host cell disruption.
YouTube video by Max Planck Institute of Molecular Physiology
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Maier Biophysics Lab @maierlab.bsky.social · 16/01/2026
We want to thank @stephanwimmi.bsky.social @isahow.bsky.social, Kai Zhou, Marc Hennes, and @sabass-lab.bsky.social for this truly collaborative and interdisciplinary work and all their input and discussions!
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stephanwimmi.bsky.social @stephanwimmi.bsky.social · 16/01/2026
Super proud to share my first preprint from the @maierlab.bsky.social lab, in a very fruitful collaboration with @isahow.bsky.social, Kai Zhou, Marc Hennes,and @sabass-lab.bsky.social, we investigated gonococcal microcolony remodeling due to changes in the dynamic Type4pili interaction network.
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George O'Toole (he/him/his) @geiselbiofilm.bsky.social · 09/01/2026
JB Editor's Choice: Bhattarai, Harshey et al. propose a new model for YcgR::c-di-GMP regulation of flagellar motility in Salmonella/E. coli. They provide evidence for the first part of their model. journals.asm.org/doi/10.1128/... @asm.org #JBacteriology
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T3SS @t3sss.bsky.social · 08/01/2026
Type IV Secretion Systems: Reconciling Diversity Through a Unified Nomenclature url: academic.oup.com/femsre/artic...
academic.oup.com
Type IV Secretion Systems: Reconciling Diversity Through a Unified Nomenclature
Abstract. Type IV secretion systems (T4SS) are versatile nanomachines responsible for the transfer of DNA and proteins across cell envelopes. From their an
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Evgenii Protasov @evgenii-protasov.bsky.social · 14/12/2025
Temporal and spatial coordination of DNA segregation and cell division in an archaeon #microbiology #DNA #archaea @pnas.org www.pnas.org/doi/abs/10.1...
pnas.org
Temporal and spatial coordination of DNA segregation and cell division in an archaeon | PNAS
Cells must coordinate DNA segregation with cytokinesis to ensure that each daughter cell inherits a complete genome. Here, we explore how DNA segre...
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Chromatin labeling and imaging group @andimaging.bsky.social · 15/12/2025
6SiR-C3-NextA is bright far-red, cell-permeable probe for live-cell selective HDAC6 imaging. Congratulations to Van-Thang Nguyen et al. @vanthang.bsky.social from @imprsgs.bsky.social ! Developed at @mpi-nat.bsky.social nat.bsky.social and published on BioRxiv www.biorxiv.org/content/10.6... .
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Jörg Vogel @jorg-vogel-lab.bsky.social · 12/12/2025
Franziska Faber and I are recruiting shared postdocs, PhD students to work on Fusobacterium & new BGCs. www.helmholtz-hiri.de/fileadmin/HI...
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Glen Dsouza @nonresidentdesi.bsky.social · 02/12/2025
I am recruiting graduate students for Fall 2026! The Microbial Ecosystems Lab @hot-mes-asu.bsky.social at ASU studies microbial interactions, spatial ecology, and imaging-driven microbiome science. If you love microbes, microfluidics, or single-cell analysis, let’s talk! www.microbialeco.systems
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STCmicrobeblog @stcmicrobeblog.bsky.social · 01/12/2025
want to see a chemotaxis array (G) and a post-discharge T6SS (I) ? inside 𝘝𝘪𝘣𝘳𝘪𝘰 𝘧𝘪𝘴𝘤𝘩𝘦𝘳𝘪 inside a 𝘌𝘱𝘳𝘺𝘮𝘢 𝘴𝘤𝘰𝘭𝘰𝘱𝘦𝘴 crypt ? go no further... #CryoET #CryoEM #teamtomo #MicroSky
chemotaxis array
image from https://www.biorxiv.org/content/10.1101/2025.11.30.691379v1
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Christian Kost @kostchristian.bsky.social · 27/11/2025
I am very excited to announce that a fully funded PhD position is available in my group. Topic: Synergistic coevolution in mono-specific and multi-species microbial consortia Please RT or forward this information to interested candidates. Deadline: 11.01.26 More info: shorturl.at/f1TuF
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PLOS Biology @plosbiology.org · 27/11/2025
Structures of 3 of the 4 #Ecoli Type VII #ABCtransporter systems are known. @allistercrow.bsky.social &co use #cryoEM structures to show that the 4th, YbbAP, may extract hydrophobic compounds from the inner membrane & present them to periplasmic TesA for hydrolysis @plosbiology.org 🧪 plos.io/49EhNHD
Top left: CryoEM map for the ATP-bound YbbAP at 3.6 Å resolution, and (below)ATP-bound YbbAP-TesA complex contoured to visualize the detergent belt. Maps are shown at two contour levels—a partially transparent low contour map is shown in white (4.5 σ), and a high contour map is shown colored by nearest protein chain (7 σ). Top right: Structures of apo YbbAP, ATP analogue-bound YbbAP, and ATP analogue-bound YbbAP-TesA. Proteins are shown in cartoon representation (YbbA green, YbbP teal, and TesA pink), and the non-hydrolyzable ATP analogue (AMP-PNP) is shown in blue atomic spheres. Bottom:  Biological functions of the four Type VII ABC transporters in Escherichia coli. From left to right: YbbAP-TesA forms a novel type VII ABC transporter involved in extraction of hydrophobic compounds from the inner membrane and enzymatic hydrolysis in the periplasm; FtsEX-EnvC uses transmembrane conformational changes to regulate the activity of peptidoglycan amidases in the periplasm; MacAB-TolC drive efflux of antibiotics and small toxins across the outer membrane; and LolCDE extracts lipoproteins from the inner membrane and delivers them to the outer membrane via the LolA shuttle.
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