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Lorenz Grundmann

@lgrundmann.bsky.social
140 followers 183 following 29 posts

PhD student in the Haselbach lab (IMP, Vienna). Visualizing proteins and cells by shooting charged particles at them.

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Reposted by Lorenz Grundmann
Max Perutz Labs Vienna @maxperutzlabs.ac.at · 26/06/2026
🆕 publication! How do cells build their molecular machines? Tsimafei Navalayeu (Ameres lab) in @embojournal.org maps the stepwise assembly of the RNA exosome in mammalian cells, revealing the quality control mechanisms that ensure this essential complex is built correctly ➡️ tinyurl.com/84c2298e
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Laurence Pearl 🔥 @laurencepearl.bsky.social · 06/06/2026
Not wanting to be snarky but this is true of every technological advance in science. My entire PhD in 1983 was the fitting and refinement of a single protein crystal structure. Today I could do the same within an hour - no AI required. Hyperbole does not help.
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joe dobbs @joedobbs.bsky.social · 03/06/2026
Super cool cryo-ET work from my colleague Xiaohan resolving a ton of ribosome assembly intermediates in the nuclei of human cells!
Figure 4 from the preprint
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Structura Biotechnology @structurabio.bsky.social · 02/06/2026
For years, the #cryoEM community viewed ~50 kDa as the practical lower size limit for SPA. This was challenged by Kim et al., who introduced the HR-HAIR method and demonstrated structure determination of proteins below 30 kDa using #CryoSPARC. Read more 👉 bit.ly/3RHMxAt
bit.ly
CryoSPARC | The Resolution Revolution Is Still Ongoing
High-Resolution Ab-Initio Reconstruction: Extending Cryo-EM to Smaller Particles with CryoSPARC™
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RCSB Protein Data Bank @rcsbpdb.bsky.social · 16/05/2026
Try this new online training game from Leandro F. Estrozi designed for newcomers in structural biology, with a focus on cryo-EM and cryo-ET map interpretation: rico.ibs.fr/helixplo...
Screenshot of online game
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Dimitry Tegunov @dtegunov.bsky.social · 03/05/2026
We're super excited to share MissAlignment: a new ML-based approach to reference-free tilt series alignment, spearheaded by @martenchaillet.bsky.social. We think it's going to make your cryo-ET life a lot better. Preprint: www.biorxiv.org/content/10.6... Code: github.com/warpem/miss-... 🧶 Thread:
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IMP @impvienna.bsky.social · 23/04/2026
Cells have a built-in cleanup system to remove unwanted proteins, and scientists can hijack it to destroy cancer drivers. Now, researchers from our Haselbach lab and collaborators reveal how this works in near-atomic detail: www.nature.com/articles/s41467-026-…
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Ahmad Jomaa @jomaalab.bsky.social · 27/03/2026
Check out the final version of this work, out today! @natcomms.nature.com www.nature.com/articles/s41...
nature.com
A molecular switch in NAC prevents mitochondrial protein mistargeting by SRP - Nature Communications
How ribosome-bound NAC distinguishes mitochondrial precursors from ER clients has remained unclear. Here, authors reveal a molecular switch in NAC that limits SRP access to nascent mitochondrial precu...
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Kashish Singh @kashishsingh.bsky.social · 24/03/2026
Happy to share my first adventure in #TeamTomo in collaboration with the talented @inaharasimov.bsky.social. It was a fun experience experience with a lot of learning along the way.
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Carter Lab @carter-lab.bsky.social · 24/03/2026
Excited to share our work on the structure and function of cytoplasmic lattices within mouse embryos. A collaborative effort with @niakanlab.bsky.social and work led by @kashishsingh.bsky.social and @inaharasimov.bsky.social . It is now out on BioRxiv: www.biorxiv.org/content/10.6...
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Leo Kiss @leokiss.bsky.social · 05/03/2026
I am incredibly excited to share that I will start my independent lab at the @unidue-zmb.bsky.social at the @unidue.bsky.social as Junior Professor of Cellular Biochemistry. Research in my lab has the goal to decipher the ubiquitin code! There are multiple open positions! (1/3)
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Florent Waltz @florentwaltz.bsky.social · 10/02/2026
Long in the making, but happy to present the Chlamydomonas chlororibosome! Cryo-ET🔬reveals a large new domain on the small subunit, built from multiple extensions in conserved ribosomal proteins. bioRxiv 📖: shorturl.at/q44tG This suggests greater chlororibosome diversity than expected! 1/n 🧵
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Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 30/01/2026
Please share! My group at @zmbp-tuebingen.bsky.social is offering a post-doctoral position (4 years). We look for a structural biologist with experience in Cryo-EM/Cryo-ET to investigate the mechanisms of host invasion by pathogenic fungi. Deadline February 28th! uni-tuebingen.de/universitaet...
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Max Planck Institute of Biochemistry @mpibiochem.bsky.social · 28/01/2026
Formation & function of #MembranelessOrganelles! #CryoET structures of #proteasome storage granules inside cells! Read our paper @cp-cell.bsky.social! ❕Publication: doi.org/10.1016/j.ce... ❕Press Release: www.biochem.mpg.de/en/pressroom @uoftmedicine.bsky.social @erc.europa.eu #UPSmeetMet
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Lorenz Grundmann @lgrundmann.bsky.social · 27/01/2026
Check out our new paper in @natcomms.nature.com .com where we used #cryoEM together with biochemical and mutational analyses investigated the cotranslational protein folding by Ssb in yeast. Publication: doi.org/10.1038/s41467-025-67685-6 Check below for the cryoEM centric feed. 👇
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Haselbach Lab @haselbachlab.bsky.social · 19/01/2026
Have a look at our new structure of co translational folding in yeast. This is collaborative work initialized by the Rospert lab from the @uni-freiburg.de. Structural work has been done by the amazing @lgrundmann.bsky.social Stay tuned for the next ribosome paper from him, following very soon.
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Haselbach Lab @haselbachlab.bsky.social · 22/01/2026
And the 4th paper in this week contribution from our lab tells about ribosome biogenesis in yeast. A follow-up story from our wonderful collaborators in Graz - the Bergler Lab. Structural work was again done by the amazing @lgrundmann.bsky.social: academic.oup.com/nar/article/...
academic.oup.com
A comprehensive view on r-protein binding and rRNA domain structuring during early eukaryotic ribosome formation
Abstract. Formation of the eukaryotic ribosomal subunits follows a strict regime to assemble ribosomal proteins (r-protein) with ribosomal RNAs (rRNA) whil
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Alicia Michael @aliciakmichael.bsky.social · 08/12/2025
One month later and still thinking about the great science and conversations from the 8th Austrian Cryo-EM Symposium 🧊🔬 Huge thanks to all who joined - let’s make next year even bigger! cryoem-symposium.pages.ist.ac.at/invited-spea...
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IMP @impvienna.bsky.social · 06/11/2025
New paper alert! Scientists in Clemens Plaschka’s lab at the IMP and @juliusbrennecke.bsky.social's lab at @imbavienna.bsky.social solved a decade-old puzzle, uncovering how the information molecule mRNA travels from the cell’s nucleus to its periphery. More: bit.ly/4nHcvys
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Julius Brennecke @juliusbrennecke.bsky.social · 07/11/2025
just in time for the opening of the @hohmannulrich.bsky.social group at @imbmainz.bsky.social what started as a project on how cells export piRNA precursors, ended up as a tour de force in mRNA export. truly wonderful collaboration with @plaschkalab.bsky.social at the @viennabiocenter.bsky.social
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Juan Carlos De la Concepcion @delaconcepcionjc.bsky.social · 31/10/2025
My main work as postdoc @plantophagy.bsky.social lab in @gmivienna.bsky.social is out in @natplants.nature.com 🌱🎉 We asked how can protein complexes diversify without compromising their function and explored this question using the plant #exocyst complex. www.nature.com/articles/s41...
nature.com
Electrostatic changes enabled the diversification of an exocyst subunit via protein complex escape - Nature Plants
The evolutionary diversification of an exocyst subunit was enabled by electrostatic shifts leading to its dissociation from the ancestral complex.
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joe dobbs @joedobbs.bsky.social · 15/10/2025
Check out our preprint! With new molecular mechanisms, 140 subtomogram averages, and ~600 annotated cells under different conditions, we @embl.org were able to describe bacterial populations with in-cell #cryoET. And there’s a surprise at the end 🕵️ www.biorxiv.org/content/10.1... #teamtomo
Figure 1 from the preprint
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Ulrich Hohmann @hohmannulrich.bsky.social · 12/10/2025
Thrilled to share that I’ll be joining @imbmainz.bsky.social in February 2026 to start my own group! We will explore new mechanisms in eukaryotic gene expression, leveraging ‘evolutionary play’ to uncover how regulation, repurposing, and hijacking shape RNA biology. PhD positions available!
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Institute of Science and Technology Austria (ISTA) @istaresearch.bsky.social · 10/10/2025
Join us for the Austrian Cryo-EM Symposium from Nov 11–12 at ISTA! Top speakers, cutting-edge cryo-EM, and a chance to explore Vienna & the ISTA campus. Register now 👉 cryoem-symposium.pages.ist.ac.at/registration/ #cryoEM
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Kresten Lindorff-Larsen @lindorfflarsen.bsky.social · 07/10/2025
A good day to remember John Gurdon’s school report from his biology master at Eton
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Ulrich Hohmann @hohmannulrich.bsky.social · 23/09/2025
How are RNAs sorted for export vs. degradation in the nucleus? In collaboration with @heick.bsky.social’s lab we (@clemensplaschka.bsky.social and @juliusbrennecke.bsky.social labs) discovered a direct mechanistic link between the export and decay machineries: www.biorxiv.org/content/10.1... (1/x)
biorxiv.org
Molecular basis of polyadenylated RNA fate determination in the nucleus
Eukaryotic genomes generate a plethora of polyadenylated (pA+) RNAs[1][1],[2][2], that are packaged into ribonucleoprotein particles (RNPs). To ensure faithful gene expression, functional pA+ RNPs, in...
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Laura Lorenzo Orts @lorenzoorts.bsky.social · 15/09/2025
I am excited to announce that I will be moving to IMB Mainz next year! The Winter call for the IPP PhD program is now open; if you are interested in maternal #mRNA regulation and #translation in early vertebrate development, please apply! Deadline: 16 October. More info: www.imb.de/students-pos...
imb.de
Laura Lorenzo Orts
IMB Mainz
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Dan Grabarczyk @dangrabarczyk.bsky.social · 28/08/2025
Glad to share the final version of our story about the UBR4 complex, an E4 ligase protein quality control hub @science.org. Now with more cryo-EM structures and a deeper dive into substrate recognition, especially escaped mitochondrial proteins @clausenlab.bsky.social www.science.org/doi/10.1126/...
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Dan Grabarczyk @dangrabarczyk.bsky.social · 27/08/2025
Happy to share our work on the structure and function of the unusual E3 ligase ZNFX1 @cp-cell.bsky.social. It uses a nucleic acid-activated transthiolation mechanism, ubiquitinating and clustering RNA to protect cells in an immune response. @clausenlab.bsky.social www.cell.com/cell/fulltex...
cell.com
A split-site E3 ligase mechanism enables ZNFX1 to ubiquitinate and cluster single-stranded RNA into ubiquitin-coated nucleoprotein particles
Grabarczyk et al. show the structure and mechanism of a non-canonical ubiquitin ligase, which is activated through nucleic-acid-induced oligomerization and is critical for cell survival during immune ...
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Martin Pacesa @martinpacesa.bsky.social · 27/08/2025
Exciting to see our protein binder design pipeline BindCraft published in its final form in @Nature ! This has been an amazing collaborative effort with Lennart, Christian, @sokrypton.org, Bruno and many other amazing lab members and collaborators. www.nature.com/articles/s41...
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Sven Klumpe @svenklumpe.bsky.social · 24/08/2025
If you are thinking about the future of structural biology, we are too! Our two cents (Jürgen Plitzko and I) just got published online here: authors.elsevier.com/sd/article/S...
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Protein Data Bank in Europe (PDBe) @pdbeurope.bsky.social · 20/08/2025
📄 New paper: 3DEM Structure Map Validation Recommendations Two new metrics assess model-to-map fitness in cryo-EM: 🔹 Q_relative_all → compares avg Q-score across PDB/EMDB 🔹 Q_relative_resolution → compares within similar resolution #3DEM #CryoEM #wwPDB
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Max Planck Institute of Biophysics @mpibp.bsky.social · 18/08/2025
We’re hosting the @embo.org Practical Course on In-situ structural biology by CryoFIB and CryoET in April 2026! 🧬❄️ You can expect hands-on training, cutting-edge methods, and a chance to work alongside leading experts in structural biology. 🔗 Apply by Dec 8, 2025: meetings.embo.org/event/26-in-...
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Chi-Min Ho @cmholab.bsky.social · 18/08/2025
Our #CryoET story on how a top antimalarial drug candidate perturbs the native malarial translation machinery is out @natsmb.nature.com🥳 rdcu.be/eBbrH A massive team effort led by @leonieanton.bsky.social Meseret Haile & Wenjing Cheng in collaboration with Jerzy Dziekan & the Alan Cowman! #TeamTomo
rdcu.be
Integrated structural biology of the native malarial translation machinery and its inhibition by an antimalarial drug
Nature Structural & Molecular Biology - Integrated structural biology approach leveraging in situ cryo-electron tomography reveals molecular details of the native malarial translation...
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DjuranovicLab at Brown University RNA Center @djuranoviclab.bsky.social · 05/08/2025
Our RAPPL purification of ribosomes and associated material is out. I am really proud of this study in collaboration primary with Pavlovic-Djuranovic lab, as well as Jovanovic and Hashem Labs. This method aims to replace 60 years old purification of ribosomes by sucrose cushions rdcu.be/ezlhg
rdcu.be
A rapid, simple, and economical method for the isolation of ribosomes and translational machinery for structural and functional studies
Nature Communications - Here, the authors present a method to rapidly isolate actively translating ribosomes in a time- and cost-effective manner using poly-lysine. The method is compatible with a...
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Lorenz Grundmann @lgrundmann.bsky.social · 27/07/2025
Come join us for the Austrian Cryo-EM Symposium!
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Miro Astore @miroastore.bsky.social · 23/07/2025
That's a wrap! The results of the first #cryoEM heterogeneity challenge are up on biorxiv! biorxiv.org/content/10.110
biorxiv.org
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Sternberg Lab @sternberglab.bsky.social · 15/05/2025
1/10 Today in @science.org in collaboration with the Liu group we report the development of a laboratory-evolved CRISPR-associated transposase (evoCAST) that supports therapeutically relevant levels of RNA-programmable gene insertion in human cells. drive.google.com/file/d/1I-Ub...
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Haselbach Lab @haselbachlab.bsky.social · 15/05/2025
Congrats to @lgrundmann.bsky.social for winning a poster award at #EMBORNAmeetsproteindecay
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Lorenz Grundmann @lgrundmann.bsky.social · 15/05/2025
The 'RNA meets Protein Decay' @embo.org workshop was really a blast. Thanks to everyone for the lively discussions! I am especially honoured that my poster was awarded with one of the two poster prizes 😇
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Pauli Group (posts by Andi Pauli) @pauligroup.bsky.social · 15/05/2025
The 2nd edition of the @embo.org workshop 'RNA meets Protein Decay', this time here in Vienna @impvienna.bsky.social, came to an end. Thanks to everyone who came and contributed to the great vibe of sharing science, discussing ideas and connecting with each other!
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Haselbach Lab @haselbachlab.bsky.social · 07/04/2025
We are looking for PhD students using time resolved cryoEM or cryoET on topics of the ubiquitin proteasome system, fertility and immunity. However, there is freedom to shape projects in own ways.
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Lorenz Grundmann @lgrundmann.bsky.social · 09/04/2025
Amazing structures and more by my colleague Sascha Amann explaining how the 26S proteasome interacts with K48 and K48-K11 branched ubiquitin chains. I think that this is a crucial puzzle piece in understanding substrate engagement by the proteasome. It was a pleasure seeing this project unfold 🚀
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Alisia Fadini @alisiafadini.bsky.social · 24/02/2025
Structural biology is in an era of dynamics & assemblies but turning raw experimental data into atomic models at scale remains challenging. @minhuanli.bsky.social and I present ROCKET🚀: an AlphaFold augmentation that integrates crystallographic and cryoEM/ET data with room for more! 1/14.
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Sven Klumpe @svenklumpe.bsky.social · 04/02/2025
Extremely excited to be joining the vibrant community of the Vienna BioCenter to build up cryo-ET and cryo-FIB milling on campus soon!
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IMP @impvienna.bsky.social · 04/02/2025
We will soon welcome @svenklumpe.bsky.social to the Vienna BioCenter, where he will use cryo-Electron Tomography to study - among other things - how #transposons shape #germlines. Sven's lab will be @imbavienna.bsky.social *AND* the IMP. Full story: www.viennabiocenter.org/about/news/s...
viennabiocenter.org
Sven Klumpe to start cryo-Electron Tomography lab at IMP and IMBA
The Vienna BioCenter institutes IMP and IMBA will soon host a joint research group headed by Sven Klumpe. The structural biologist will join the two institutes with an innovative double-affiliation to...
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Lorenz Grundmann @lgrundmann.bsky.social · 07/12/2024
🚀 New publication 🚀 I am excited that the preprint on the nuclear import mechanism of the proteasome is published. It was a major team effort from the two labs @haselbachlab.bsky.social @johanneszuber.bsky.social. The project was spearheaded by the amazing first author @hannabrunner.bsky.social.
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