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Ina Attrée

@inaattree.bsky.social
124 followers 204 following 19 posts

Love bacteriology

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Nature Biotechnology @natbiotech.nature.com · 18/05/2026
The May issue is live nature.com/nbt/volumes/... On the cover, Zhang et al. describe an antibody-based therapy against drug-resistant S. aureus. The antibody conjugate selectively binds to the wall teichoic acid of the bacteria and enriches calcium on the cell envelope go.nature.com/3UaGItg
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Ina Attrée @inaattree.bsky.social · 18/02/2026
Happy to share that our work is finally out in eLife. Neutralizing human monoclonal antibodies that target the PcrV component of the type III secretion system of Pseudomonas aeruginosa act through distinct mechanisms doi.org/10.7554/eLif...
doi.org
Neutralizing human monoclonal antibodies that target the PcrV component of the type III secretion system of Pseudomonas aeruginosa act through distinct mechanisms
Human antibodies isolated from cystic fibrosis patients against PscF and PcrV of the Pseudomonas aeruginosa Type 3 Secretion System reveal that anti-PcrV antibodies inhibit secretion through distinct ...
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daviss @daviss.org · 30/01/2026
Now: Bruce Springsteen sings “Streets of Minneapolis” in Minneapolis
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Barack Obama @barackobama.bsky.social · 25/01/2026
The killing of Alex Pretti is a heartbreaking tragedy. It should also be a wake-up call to every American, regardless of party, that many of our core values as a nation are increasingly under assault.
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Claire E. Aubin @ceaubin.com · 24/01/2026
The rest of the world should absolutely boycott the World Cup and boycott the Olympics. At minimum.
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The New York Times @nytimes.com · 25/01/2026
Videos verified by The New York Times show the man federal agents shot and killed in Minneapolis on Saturday was holding a phone, not a gun, before the agents took him to the ground and shot him. At least 10 shots appear to have been fired within five seconds. www.nytimes.com/interactive/...
In a screengrab from a video, Alex Jeffrey Pretti is seen holding a phone as agents approach him. A headline reads: "How Federal Agents Shot And Killed Alex Jeffrey Pretti, Moment by Moment." Credit: dangjessie, via Instagram
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Xavier Charpentier @labxc.bsky.social · 13/01/2026
Une opportunité unique de former des étudiants talentueux à la biologie des bactéries à l'ENS Lyon et mener des recherches sur les phages, l'immunité bactérienne, le transfert génétique horizontal (HGT) et/ou les éléments génétiques mobiles au sein du département de bactériologie du CIRI.
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PLOS Biology @plosbiology.org · 26/11/2025
Despite advances in #ProximityLabeling tools, we can't capture intermediary proteins that bridge two associated non-interacting proteins. STUPPIT is a novel method to label intermediary proteins between two non-interacting partners in signaling pathways @plosbiology.org 🧪 plos.io/4ab6YwQ
This artwork was inspired by the ancient Chinese legend of "The Cowherd and the Weaver Girl," where two star-crossed lovers are reunited once a year by a bridge of magpies. Here, the Cowherd and Weaver Girl represent two non-interacting proteins (e.g., actin and YAP1), separated by the Milky Way—symbolizing the complex cellular environment. The magpie bridge, formed by STUPPIT components with Pup(E) as the body and Split-TurboID fragments as glowing wings, enables their connection. Soaring lanterns released from the bridge represent biotin-labeled proximal proteins (e.g., AMOT), illuminating the functional interactome between the once-distant proteins. Xie et al. demonstrate how the STUPPIT system acts as a molecular "magpie bridge," enabling proximity labeling and revealing functional interactomes between proteins that do not directly bind—just as the magpie bridge reunites the star-crossed lovers. Artwork by graduate student Xin Li.
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Rémi Fronzes @fronzeslab.bsky.social · 21/11/2025
Our latest T7SS study is now out in Science Advances! We solved the cryoEM structure of the T7SSb core unit (T7bCU) composed of YukB, YukC, and YukD from Bacillus subtilis, revealing how these components assemble within the secretion machinery. www.science.org/doi/10.1126/...
science.org
A ubiquitin-like protein controls assembly of a bacterial type VIIb secretion system
Cryo-EM structure reveals how a ubiquitin-like protein orchestrates assembly of a bacterial weapon system.
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FEMS Journals @femsjournals.bsky.social · 04/10/2025
Some #Pseudomonas aeruginosa strains naturally lack the major virulence system T3SS. 🦠 @inaattree.bsky.social & @cbuch.bsky.social labs reveal that avirulent isolates still produce valuable metabolites (e.g. rhamnolipids, elastase, pyoverdine)—making them promising for #biotech use. buff.ly/JST7ZR1
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Manon Janet-Maitre @manonjanet.bsky.social · 13/08/2025
Happy to share that our paper on the complement resistome of Pseudomonas aeruginosa is finally out in I&I! This work was done during my PhD in the lab of @inaattree.bsky.social and made possible by my amazing co-authors and colleagues 🥳 You can check it out here: journals.asm.org/doi/10.1128/...
journals.asm.org
Strain-specific variation in the complement resistome of Pseudomonas aeruginosa | Infection and Immunity
Bacterial bloodstream infections (BSIs) represent a huge burden for modern healthcare. BSIs caused by Pseudomonas aeruginosa exhibit the highest mortality rate (1, 2). This leading nosocomial pathogen causes various primary infections, such as burn wounds, pulmonary and urinary tract infections (3). Using its arsenal of virulence factors, it is able to breach both epithelial and endothelial barriers ([4–7], reviewed in [8]). Once in the bloodstream, P. aeruginosa faces the host immune response. In a previous study, we showed the complement system to be the main innate immune component responsible for the elimination of P. aeruginosa in the blood (9). The complement system is an enzymatic cascade of more than 30 proteins, whose activation results in the formation of the membrane attack complex (MAC) in the outer membrane of the target pathogen. Complement-mediated killing happens through three main steps including complement activation, assembly of the C5b-9 MAC on the outer membrane, and penetration of the MAC into the bilayer, eventually leading to bacterial lysis (10, 11). P. aeruginosa evolved strategies to evade those three steps. The secretion of proteases including AprA and LasB, cleaving C1, C2, and C3 or the secretion of ecotin, a protease inhibitor, leads to the blockade of complement activation (12–14). P. aeruginosa can also recruit host complement inhibitors to its surface, notably through the exposure of the elongation factor Tuf or the dihydrolipoamide dehydrogenase Lpd ([15, 16], reviewed in [8]). These immune evasion proteins can recruit the Factor H family of complement regulators, resulting in C3b degradation and preventing downstream proteolysis cascade. Finally, P. aeruginosa can modify its surface by producing exopolysaccharides (EPSs) such as alginate. When acylated, alginates decrease bacterial opsonization by the C3b molecule (17, 18).
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Ina Attrée @inaattree.bsky.social · 23/09/2025
Thank you Akos for posting our publication! I was kind of out from social media….👍
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Ákos T Kovács @evolvedbiofilm.bsky.social · 10/06/2025
We have two new positions, a PhD and a Post doc at #InstituteofBiologyLeiden within our @microclockerc.bsky.social #ERCSyG project to discover interaction of #circadianclocks between Bacillus subtilis and Arabidopsis please share these with your network! 🙏 links below👇 [1/3]
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Nature Communications @natcomms.nature.com · 03/05/2025
Some bacteria auto-degrade after death, thus permitting population nutrient recycling 🦠 💀 🦠 #microbiology #MicrobialEcology #BacteriaAreAwesome
bit.ly
Bacteria encode post-mortem protein catabolism that enables altruistic nutrient recycling - Nature Communications
Processes that occur after death have not received the same level of attention as the mechanisms of life. In this study, the authors show that bacteria have potentially evolved an altruistic trait to auto-degrade after death, thus permitting population nutrient recycling.
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Feldman Lab@WashU @feldmanlab.bsky.social · 29/04/2025
Yes! @manonjanet.bsky.social preprint is out! We show using BALF transfer that intracelular Acinetobacter baumannii can seed an infection in a susceptible mouse, suggesting that intracellular bacteria may be reservoir for recurrent infections nam10.safelinks.protection.outlook.com?url=https%3A...
nam10.safelinks.protection.outlook.com
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Ina Attrée @inaattree.bsky.social · 04/05/2025
Super work Manon and @feldmanlab.bsky.social !
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Roslyn Reid @the-moonshadow.bsky.social · 28/04/2025
Good work, Dr. Hotez!
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Animalcules @bacteriophile.bsky.social · 20/04/2025
Co-zorbs: Motile, multispecies biofilms aid transport of diverse bacterial species | PNAS www.pnas.org/doi/10.1073/...
pnas.org
Co-zorbs: Motile, multispecies biofilms aid transport of diverse bacterial species | PNAS
Biofilms are three-dimensional structures containing one or more bacterial species embedded in extracellular polymeric substances. Although most bi...
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PLOS Biology @plosbiology.org · 08/04/2025
The BASEL collection of E. coli #phages is limited by its host strain. @humollidorentina.bsky.social @damienpiel.bsky.social @aharms485.bsky.social &co use a modified host to add 36 new phages, revealing roles of O-antigen in recognition & R-M systems in immunity @plosbiology.org 🧪 plos.io/4jirGvX
A fanciful depiction of BASEL phages on a roadmap. Credit: Fabienne Estermann
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Tatsuya Nobori @tatsuyanobori.bsky.social · 05/04/2025
A chemical radar allows bacteria to detect and kill predators www.cell.com/cell/fulltex...
cell.com
A chemical radar allows bacteria to detect and kill predators
Pseudomonas syringae can detect and kill microbial predators via a chemical radar (Cra), which also allows the bacterium to infect plants despite predation pressure.
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Ina Attrée @inaattree.bsky.social · 02/04/2025
Great work ! Congrats
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T3SS @t3sss.bsky.social · 02/04/2025
Pseudomonas syringae subpopulations cooperate by coordinating flagellar and type III secretion spatiotemporal dynamics to facilitate plant infection www.nature.com/articles/s41...
nature.com
Pseudomonas syringae subpopulations cooperate by coordinating flagellar and type III secretion spatiotemporal dynamics to facilitate plant infection - Nature Microbiology
Single-cell gene expression analysis reveals phenotypic heterogeneity to enable bacterial specialization over the course of plant colonization.
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Jarno Mäkelä @jmakela.bsky.social · 01/04/2025
We are looking for a postdoc with microbiology background for #superresolution #singlemolecule #ERC tracking project. Apply by 27.4.2025. 🦠🔬🧫 Pls share! www.aalto.fi/en/open-posi...
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Biozentrum, University of Basel @biozentrum.unibas.ch · 31/03/2025
Postdoc in Human Bacterial Infections (100%), Group Dirk Bumann, Biozentrum www.biozentrum.unibas.ch/open-positio... @biozentrum @unibas.ch #Biozentrum #Basel #research #science #joboffer #hiring #human #infection
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Asaf Levy @asaflevylab.bsky.social · 30/03/2025
www.nature.com/articles/s41...
nature.com
Inducible transposon mutagenesis identifies bacterial fitness determinants during infection in mice - Nature Microbiology
InducTn-seq, a method for inducible mutagenesis followed by transposon insertion site sequencing, enables temporal control of transposition to bypass population bottlenecks and enable the quantificati...
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Mariana Pinho @pinholab.bsky.social · 29/03/2025
We have 3 positions for students who want to start a PhD in the next 12 months. If you like advanced fluorescence microscopy techniques and S. aureus cell biology, check links and apply(April 4) euraxess.ec.europa.eu/jobs/325394 euraxess.ec.europa.eu/jobs/325395 euraxess.ec.europa.eu/jobs/325396
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Dr Katherine Duncan @kateduncan.bsky.social · 27/03/2025
New antibiotic that kills drug-resistant bacteria discovered in technician’s garden www.nature.com/articles/d41...
nature.com
New antibiotic that kills drug-resistant bacteria discovered in technician’s garden
The molecule targets bacteria in a way that other drugs don’t.
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Ina Attrée @inaattree.bsky.social · 29/03/2025
Our work on T3SS- negative P. aeruginosa collection is now available. We found that the strains belong to two clades. Several strains avirulent in Galleria produce sec. metabolites, including rhamnolipids and pyo. Thanks to all contributors - three labs two countries!
biorxiv.org
Avirulent Pseudomonas aeruginosa T3SS-negative strains belonging to Clade 5 produce variable quantities of secondary metabolites
Pseudomonas species are ubiquitous in the environment and serve as valuable source of enzymes and secondary metabolites for industrial applications. P. aeruginosa secretes metalloproteases such as ela...
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Ina Attrée @inaattree.bsky.social · 28/03/2025
Excellent! Merci
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Maelle Paillat @maellepllt.bsky.social · 17/03/2025
The Journées Sécrétion are back! 2nd and 3rd October in Marseille Keynote lecture by: @archaellum.bsky.social Registration is open until May 15: forms.gle/2qxHntTktoxw... Organized by Romé Voulhoux @lcbofficiel.bsky.social, @cascaleslab.bsky.social, Thierry Doan, @juliengiraud.bsky.social
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Filipe Carvalho @ffchcarvalho.bsky.social · 17/03/2025
#MicroSky #AMR
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Yves Brun lab @brunlabcaulo.bsky.social · 12/03/2025
Please repost: Postdoc position in antibiotic discovery in a large multidisciplinary project combining high-throughput approaches, microscopy, AI, and hit-to-lead optimization at @umontreal.ca and @mila-quebec.bsky.social. Apply to ML.Antibiotics@gmail.com. See lnkd.in/dVVk4N3s. #microsky
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Journal of Cell Biology @jcb.org · 13/03/2025
Any1 is a phospholipid scramblase involved in #endosome biogenesis, say Jieqiong Gao, Christian Ungermann and colleagues (Osnabrück University): rupress.org/jcb/article/... #Membrane #lipid #Organelles #Biochemistry
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Ina Attrée @inaattree.bsky.social · 08/03/2025
Happy to share our first paper on functional neutralizing antibodies against T3SS, isolated from CF patients. Great collaboration between three groups at IBS and CHU Grenoble. Others to come….
elifesciences.org
Neutralizing human monoclonal antibodies that target the PcrV component of the Type III Secretion System of Pseudomonas aeruginosa act through distinct mechanisms
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Ina Attrée @inaattree.bsky.social · 07/03/2025
Our Team PB&RC stands up for Science with IBS members!
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Institut Pasteur | 130 years of biomedical research @pasteur.fr · 14/02/2025
🌟 Join Institut Pasteur as a Junior Research Group Leader 🌟 Explore host-microbe interactions in key areas like vaccinology, infectious diseases, neuro-immunology, and maternal health. 📅 Deadline: Feb 28, 2025 (few weeks left!) Apply now ⬇️
research.pasteur.fr
Call for applications 2025 - Creation of new research groups at the Institut Pasteur - Research
The Institut Pasteur launches an international call to recruit new junior research group leaders in the application of cutting-edge transdisciplinary approaches to the exploration of host-microbe, tis...
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Ina Attrée @inaattree.bsky.social · 12/02/2025
I agree! Thanks for sharing
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davidaaronrosen.bsky.social @davidaaronrosen.bsky.social · 11/02/2025
Great work by Dr. Jason Harris and colleagues at Harvard. First true in-depth evaluation of immune response to Klebsiella bacteremia in humans! Antibody responses in Klebsiella pneumoniae bloodstream infection: a prospective cohort study - The Lancet Microbe www.thelancet.com/journals/lan...
thelancet.com
Antibody responses in Klebsiella pneumoniae bloodstream infection: a prospective cohort study
O-specific polysaccharide was immunogenic in patients with K pneumoniae bloodstream infection, supporting its potential as a candidate vaccine antigen. The cross-reactivity observed between similar O-...
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Jose Bengoechea @josebengoechea.bsky.social · 06/02/2025
New pre print! We establish an ex vivo blood vessel model to investigate the effect of infection on vascular physiology in real time. We show Klebsiella inhibits vasodilation in a T6SS-dependent manner by targeting eNOs. Superb work by @safimicro.bsky.social www.biorxiv.org/content/10.1...
biorxiv.org
Klebsiella pneumoniae disrupts vasodilation by targeting eNOS post translational modifications via the type VI secretion system and the capsule polysaccharide
Vasodilation is a crucial protective response to inflammation and infection. Endothelial cells control vasodilation through the bioavailability of eNOS-produced nitric oxide (NO), and the generation o...
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Tanmay Bharat @tbharat-lab.bsky.social · 06/02/2025
The mechanics of a continuous self-assembling surface-layer aids cell division in an archaeon Tight collaboration with @buzzbaum.bsky.social, Sulfolobus cryo-ET from @idocaspy.bsky.social www.biorxiv.org/content/10.1...
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Biozentrum, University of Basel @biozentrum.unibas.ch · 06/02/2025
Why do antibiotics sometimes fail even against non-resistant bacteria? Prof. Dirk Bumann’s team challenges the widespread belief that particularly resilient bacteria are responsible for antibiotic failure. @unibas.ch @nature.com @nccr-antiresist.bsky.social www.biozentrum.unibas.ch/news/detail/...
biozentrum.unibas.ch
Why antibiotics can fail even against non-resistant bacteria
Antibiotics are indispensable in the treatment of bacterial infections. But why are they sometimes ineffective, even when the bacteria are not resistant? The team led by Prof. Dirk Bumann challenges t...
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Seth Thomas Scanlon @immunoeditor.bsky.social · 06/02/2025
Also last week in @science.org : @kanekiyom.bsky.social, Douglas Reed, Simon Barratt-Boyes, & colleagues show pre-exposure broadly neutralizing #antibody ( #bnAb ) #prophylaxis against a conserved supersite on #influenza #hemagglutinin (HA) stem protects #macaques against #H5N1 infection! #BirdFlu
science.org
Pre-exposure antibody prophylaxis protects macaques from severe influenza
Influenza virus pandemics and seasonal epidemics have claimed countless lives. Recurrent zoonotic spillovers of influenza viruses with pandemic potential underscore the need for effective countermeasu...
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Ina Attrée @inaattree.bsky.social · 04/02/2025
A human gut bacterium antagonizes neighboring bacteria by altering their protein-folding ability: Cell Host & Microbe www.cell.com/cell-host-mi...
cell.com
A human gut bacterium antagonizes neighboring bacteria by altering their protein-folding ability
Antagonism shapes microbiomes. Lim et al. identify a mechanism used by human gut commensals to antagonize related bacteria. The secreted effector Bte1 alters the protein-folding machinery of targeted ...
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Saskia Bricmont @saskiabricmont.bsky.social · 03/02/2025
Face à un gouvernement rétrograde, @ecolo.be dépose une proposition de loi pour assurer une représentation de genre équilibrée au Conseil des Ministres, comme on l'a fait aux autres niveaux de pouvoir. Mesdames, le combat pour nos droits ne s'arrête pas là!
lalibre.be
Écolo dénonce un premier gros impair du gouvernement fédéral: "En voyant la photo officielle ce matin, j'ai eu un haut-le-cœur"
La coprésidente d'Écolo, Marie Lecocq, dénonce le faible nombre de femmes ministres au sein de l'équipe De Wever. Sa formation politique a déposé une proposition de révision de la Constitution pour ga...
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Kathleen Kay @kathleenmkay.bsky.social · 28/01/2025
Please consider non-profit society journals when you choose a journal for submitting your work AND for reviewing/editing.
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Pseudomonas Genome Database @pseudomonas.com · 01/02/2025
Are you a #Pseudomonas researcher? Please take our survey and help shape the direction and priority of future pseudomonas.com database development: forms.gle/gTPT6ruf3mqb... #microsky #idsky
pseudomonas.com
The Pseudomonas Genome Database - Genome annotation and comparative genome analysis
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Lucy Crouch @lucyicm.bsky.social · 31/01/2025
New paper out today from the lab on Akkermansia muciniphila 🦠and how it breaks down host glycans! Very proud of my group, especially @cassiebakshani.bsky.social who did an amazing job. @naturemicrobiol.bsky.social www.nature.com/articles/s41...
nature.com
Carbohydrate-active enzymes from Akkermansia muciniphila break down mucin O-glycans to completion - Nature Microbiology
Biochemical characterization of 66 carbohydrate-active enzymes from the gut microorganism Akkermansia muciniphila reveals that these enzymes can break down a range of host glycans, including mucin, wh...
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Sorek Lab @soreklab.bsky.social · 30/01/2025
Our paper out @Nature: CARD domains mediate anti-phage defense in bacterial gasdermin systems CARDs are essential for caspase recruitment during human inflammasome activation. We now find them in bacterial immune systems Congrats Tana Wein! Thank you Kranzusch lab! www.nature.com/articles/s41...
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Félix Ramos-León @felixrl.bsky.social · 29/01/2025
A novel polysaccharide in the envelope of S. aureus influences the septal secretionof preproteins with a YSIRK/GXXS motif 🦠🧫🧪 journals.asm.org/doi/10.1128/...
journals.asm.org
A novel polysaccharide in the envelope of S. aureus influences the septal secretion of preproteins with a YSIRK/GXXS motif | Journal of Bacteriology
Gram-positive bacteria assemble peptidoglycan-linked polymers known as wall teichoic acids (WTA). Both Staphylococcus aureus and Bacillus subtilis elaborate WTAs made of poly-glycerol or poly-ribitol ...
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ᐯIᑕTOᖇ ᑎIᘔET, ᗰᗪ @nizet.bsky.social · 28/01/2025
Science: sometimes it just takes a little protocol tweak Petri (1887) Centralblatt fur Bacteriologie und Parasitenkunde “A minor modification of the plating technique of Koch...under these conditions, contamination from airborne germs rarely occurs” His modification? A͓̽ ͓̽L͓̽I͓̽D͓̽ ͓̽F͓̽O͓̽R͓̽ ͓̽T͓̽H͓̽E͓̽ ͓̽A͓̽G͓̽A͓̽R͓̽ ͓̽D͓̽I͓̽S͓̽H͓̽
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