Asaf Levy @asaflevylab.bsky.social · 11hIn October we are starting year 8 (I think) of the virtual microbiology journal club (on Zoom) with fantatstic speakers, as usual. Most talks are about bacteria. If you (PIs, trainees, anyone interested in science) want to be included in the mailing list - shoot me an email. alevy@mail.huji.ac.il 023
Asaf Levy @asaflevylab.bsky.social · 29/09/2026Our new preprint is out. www.biorxiv.org/content/10.6... We applied an XGBoost algorithm with genomic and biochemical features to detect all T6SS effectors in bacterial genomes. Next, we validated 3 novel effectors that serve as antibacterial or anti-euk toxins. One of the effectors, frombiorxiv.org 162
Asaf Levy @asaflevylab.bsky.social · 28/09/2026I found this paper from 2002 about plant-fungal symbiosis which enables both partners to grow above 45C (!) in geothermal soils in Lassen Volcanic and Yellowstone National Parks. As far as I understand te genetic basis of this thermotolerance is still unknown. www.science.org/doi/10.1126/...science.orgThermotolerance Generated by Plant/Fungal SymbiosisAll plants studied in natural ecosystems are symbiotic with fungi (1), which obtain nutrients while either positively, negatively, or neutrally affecting host fitness (2). Plant adaptation to selectiv... 150
Reposted by Asaf LevyYasin Dagdas @plantophagy.bsky.social · 24/09/2026Congrats @mayavoichek.bsky.social @juliusbrennecke.bsky.social & everyone involved!!! 1243
Reposted by Asaf LevybioRxiv Microbiology @biorxiv-microbiol.bsky.social · 20/09/2026Experimental evolution of root-associated microbial communities www.biorxiv.org/content/10.64898/20… 0109
Reposted by Asaf LevyOmri Finkel עמרי عُمري @finkel-lab.bsky.social · 17/09/2026Michal Breker and I started our labs around the same time. Michal studies Chlamydomonas, and I plant microbiota. We joined forces to see how our bugs interact. This led us down a long and winding road, with 3 amazing PhDs and help from many friends. This is the first product of this collaboration.biorxiv.orgConserved inhibitory mechanisms of root-associated bacteria towards Arabidopsis thaliana and Chlamydomonas reinhardtiiSoil bacteria colonize plants without causing visible disease, yet many suppress host growth. The prevalence and evolutionary reach of this cryptic inhibition are unknown, because phenotyping hundreds... 0149
Asaf Levy @asaflevylab.bsky.social · 16/09/2026Interesting finding by Dianne Newman's group from a few months ago: Elevated antibiotic resistance in soils under drought www.nature.com/articles/s41...nature.comDrought drives elevated antibiotic resistance across soils - Nature MicrobiologyDrought conditions in soil systems lead to elevated concentrations of natural antibiotics, as well as the enrichment of antibiotic-resistant microorganisms, highlighting a link between climate and the... 010
Asaf Levy @asaflevylab.bsky.social · 13/09/2026Nice experimental evolution work from @cascaleslab.bsky.social on the mechanisms by which T6SS is lost during evolution when present with T6SS-immune competing bacteria, compared to its maintenance when competitors are T6SS susceptible. www.cell.com/current-biol...cell.comExperimental evolution reveals genetic routes for adaptive loss of the antibacterial type VI secretion systemTaillefer et al. show that a bacterial type VI secretion system is lost or attenuated during experimental evolution when it provides no competitive advantage but is maintained in the presence of susceptible competitors. T6SS inactivation arises through diverse regulatory and structural mutations, revealing how ecological context shapes antibacterial weapon evolution. 083
Asaf Levy @asaflevylab.bsky.social · 12/09/2026Happy new Jewish year to the Levy lab friends, collaborators, and Reviewers #2 around the world. May the next one will be much more peaceful. (Pic from lab's bday in Palmachim beach 2 days ago). 081
Asaf Levy @asaflevylab.bsky.social · 08/09/2026PISA results are alarming. (Graph from The Economist). 041
Asaf Levy @asaflevylab.bsky.social · 06/09/2026Our friend the @shlezingerlab.bsky.social is hiring! Highly recommended. Working on the fascinating unknown world of mycoviruses. Her 1st postdoc, Marina Campos Rocha, just started her independent academic position. 053
Asaf Levy @asaflevylab.bsky.social · 06/09/2026Cool stuff from the Sorek lab on the functional connection between anti-phage bacterial immunity and plant immunity and the ways to manipulate these. 1st author: Dr. Ohad Roth @soreklab.bsky.social www.biorxiv.org/content/10.6...biorxiv.orgPlant pathogens cleave 2′cADPR to suppress TIR immune signalingSmall molecules produced by TIR (Toll-interleukin-1 receptor) domains are essential for plant immune signaling. A central TIR-derived signal is 2ʹcADPR, a cyclic ADP-ribose (ADPR) molecule that is gen... 080
Asaf Levy @asaflevylab.bsky.social · 06/09/2026journals.plos.org/plospathogen...journals.plos.orgAcidic and alkaline conditions enhance Staphylococcus aureus α-toxin pore formation and cytotoxicityAuthor summary Staphylococcus aureus is a bacterium that can cause severe invasive infections. S. aureus produces many toxins during infection, of which α-toxin (AT) is clinically relevant. AT is a po... 020
Asaf Levy @asaflevylab.bsky.social · 01/09/2026Pretty amazing ecological effect. Microalgae from the Nile river delta are currently clogging Israel's desalination plants in the Mediterranean, disrupting agriculture in desert which is based on desalinated water. @bejalab.bsky.social 310
Asaf Levy @asaflevylab.bsky.social · 29/08/2026Amazing achievement to Bonnie Bassler. The medal is shared with the most creative scientists ever lived since the 18th century. 000
Asaf Levy @asaflevylab.bsky.social · 27/08/2026A nice ecological story from Nancy Moran's lab. www.nature.com/articles/s41...nature.comColibactin produced by a honeybee gut symbiont mediates pathogen defence - Nature MicrobiologyA colibactin-producing symbiont in honeybee guts defends against opportunistic pathogens and confers protection. 063
Asaf Levy @asaflevylab.bsky.social · 25/08/2026For nearly 20 years I have used this pic as my FB profile image and already forgot where it was taken by my wife. But today, while hiking with my kids in Aigüestortes i Estany de Sant Maurici National Park (Spain) I found the exact corner and my sons reproduced it. 011
Asaf Levy @asaflevylab.bsky.social · 07/08/2026Elections are on Oct. "A sane government is required" 030
Reposted by Asaf LevyItai Yanai @itaiyanai.bsky.social · 31/07/2026Science funding has still not reached gender equality: "Projects led by male PIs received roughly twice the mean funding compared to female PIs." www.sciencedirect.com/science/arti... 01112
Asaf Levy @asaflevylab.bsky.social · 26/07/2026The pope promotes people to saints after having evidence for their miracles. Pope Leo already canonized 9 people in his short term. Pope Francis: more than 60. And I am thinking about this graph 030
Asaf Levy @asaflevylab.bsky.social · 22/07/2026The only people who ever loved war for long were profiteers, generals, staff officers, and whores. They all had the best and finest time of their lives and most of them made the most money they had ever made. Hemingway, 1936 121
Asaf Levy @asaflevylab.bsky.social · 17/07/2026The year is 2500 Technology enables sampling of the entire ecosystem at atom resolution within milliseconds. Analysis is done using ImageJ 060
Asaf Levy @asaflevylab.bsky.social · 16/07/2026We're recruiting a fungal biologist to our friendly department at the Hebrew University of Jerusalem, Rehovot, Israel. For details contact our chair. Talented non-Israli applicants are welcome to apply. See below. 01215
Asaf Levy @asaflevylab.bsky.social · 10/07/2026A cool work from Ilya and Rotem on the 'damage-associated molecular pattern' that bacteria sense to detect phage attack (DNA degradation leading to increase in methylated nucleotides) and the immune response as abortive infection. www.science.org/doi/10.1126/...science.orgBacteria sense virus-induced genome degradation via methylated mononucleotidesPhages often degrade the genome of their bacterial host to individual nucleotides. Here we describe Metis, a bacterial defense system that directly senses phage-mediated host genome degradation. Metis... 0140
Asaf Levy @asaflevylab.bsky.social · 07/07/2026This God somehow has many hands when it comes to Argentina's football 030
Asaf Levy @asaflevylab.bsky.social · 06/07/2026And all the roads we have to walk are winding And all the lights that lead us there are blinding @proftracypalmer.bsky.social Good luck!!! 010
Reposted by Asaf LevyEric Topol @erictopol.bsky.social · 04/07/2026On our 250th birthday, celebrating the contribution of immigrants and international collaboration —46% of people with doctoral-level degrees working in US science and engineering fields are foreign-born 7513171
Asaf Levy @asaflevylab.bsky.social · 02/07/2026From the lead authors of Haimlich S. et al. 2024 and Bograd A. et al. 2025 The lab's best achievement till now! 030
Asaf Levy @asaflevylab.bsky.social · 01/07/2026Anusha Majumder from Sahar Melamed's lab @saharmelamed.bsky.social identified sRNAs in P. putida that affects plant growth. 000
Asaf Levy @asaflevylab.bsky.social · 26/06/2026After this amazing half someone needs to name a new taxonomic group: Dembelearcheota 150
Reposted by Asaf LevyJose Bengoechea @josebengoechea.bsky.social · 26/06/2026Recruiting a postdoc to join my lab at @lshtm.bsky.social to work in an MRC porgramme grant funded project to dissect the gut colonziation by Klebsiella. In vivo and in vitro models, and new approaches to identify Klebsiella factors involved. jobs.lshtm.ac.uk/vacancy.aspx...jobs.lshtm.ac.ukJob Opportunity at LSHTM: Research FellowThe London School of Hygiene & Tropical Medicine (LSHTM) is one of the world’s leading public health universities. Our mission is to improve health and health equity in the UK and worldwide; working i... 02327
Asaf Levy @asaflevylab.bsky.social · 25/06/2026Our new review paper is out: Discovery of novel antimicrobials within microbiomes www.sciencedirect.com/science/arti... A fun collaboration with @delafuentelab.bsky.social and the 1st paper of Erez Weisberg and Aya Friedmansciencedirect.comDiscovery of novel antimicrobials within microbiomesAntimicrobial-resistant bacterial and fungal pathogens constitute a severe threat to public health. The pace at which new antimicrobials are being rel… 163
Asaf Levy @asaflevylab.bsky.social · 21/06/2026A relatively recent work with cool finding. Many questions remain open. "A complete DNA repair system assembled by two endosymbionts restores heat tolerance of the insect host" www.pnas.org/doi/10.1073/...pnas.orgA complete DNA repair system assembled by two endosymbionts restores heat tolerance of the insect host | PNASDNA repair systems are essential to maintain genome integrity and stability. Some obligate endosymbionts that experience long-term symbiosis with t... 0155
Asaf Levy @asaflevylab.bsky.social · 19/06/2026Meyerowitz, Sundaresan, Dangl, JG Jones, Staskawics and the late Chory received yesterday the 2024 and 2025 Wolf Prize in agriculture in the Knesset. (Among laureates in other natual sciences) 'The founding fathers' 050
Asaf Levy @asaflevylab.bsky.social · 17/06/2026Amazing group of Wolf Prize in Agriculture awardees (2020, 2024,2025) today at the Hebrew Univeristy faculty of agriculture. In the picture: Elliot Meyerowitz Venkatesan Sundaresan Brian Staskawicz Jonathan D. G. Jones Caroline Dean Missing: Jeffery Dangl (presenting from home) The late Joanne Chory 120
Asaf Levy @asaflevylab.bsky.social · 17/06/2026What does change a gene's definition from a 'regulator' to a 'master regulator'? The fact that you are studying it 160
Asaf Levy @asaflevylab.bsky.social · 15/06/2026So many brave Iranians lost they lives becaue they believed him. 000
Reposted by Asaf LevyToni Gabaldón @tonigabaldon.bsky.social · 10/06/2026Our paper "Gene ancestries reveal diverse microbial associations during eukaryogenesis.” is finally out in Nature. Eukaryogenesis was likely a gradual process shaped by multiple microbial partners and virus-mediated gene transfer, rather than a single binary symbiosis. doi.org/10.1038/s415... 10278135
Reposted by Asaf LevySholto David @sholtodavid.bsky.social · 02/06/2026Today I'm posting a new blog about an astonishing scientific own goal. Hundreds of papers have reported using a totally wrong antibody to investigate the tumor suppressor p16. This mistake has happened because scientists have muddled the names of two proteins. forbetterscience.com/2026/06/02/m... 1617078
Asaf Levy @asaflevylab.bsky.social · 09/06/2026A cool story. www.science.org/doi/10.1126/...science.orgA plant immune receptor mediates tritrophic interactions by linking caterpillar detection to predator recruitmentA plant receptor detects caterpillar attack and triggers emission of chemical cues to attract predatory wasps. 072
Asaf Levy @asaflevylab.bsky.social · 08/06/2026How your email found me today (by the genious Haim Goldberg) 0132
Asaf Levy @asaflevylab.bsky.social · 06/06/2026The Natufian culture lived in the area of today's Israel and Lebanon from 15,000–11,500 Before Present. In the Eynan site people discovered a burial of 45 yo woman and her puppy, which is the oldest physical evidence for dog domestication. Published in Nature in 1978 www.nature.com/articles/276... 021
Asaf Levy @asaflevylab.bsky.social · 05/06/2026www.science.org/doi/10.1126/...science.orgMolecular mimicry of a pathogen virulence target by a plant immune receptorPlants and animals respond to pathogen attack by mounting innate immune responses that require intracellular nucleotide-binding leucine-rich repeat (NLR) proteins. These immune receptors detect pathog... 032