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edenchang.bsky.social

@edenchang.bsky.social
182 followers 951 following 4 posts

RA Kuo lab www.hsia-laboratory.com PhD Coyle lab www.coylelab.org Postdoc Rosen lab

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Reposted by @edenchang.bsky.social
Nobel Prize @nobelprize.org · 06/10/2026
BREAKING NEWS The Royal Swedish Academy of Sciences has decided to award the 2026 #NobelPrize in Physics to Francis Halzen “for decisive contributions to the IceCube Neutrino Observatory and the discovery of high-energy neutrinos of astrophysical origin.”
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Song Kim @songk.bsky.social · 23/09/2026
Excited to share my first preprint from my PhD work in the Bement lab 🥳 💝 We discovered a previously unrecognized function of the RhoGAP RGA-3/4: RGA-3/4 directly and cooperatively binds to F-actin and reorganizes it by crosslinking actin filaments www.biorxiv.org/content/10.6...
biorxiv.org
Molecular and cellular characterization of the interaction between the Rho GAP RGA-3/4 and F-actin
During cytokinesis in amphibian and echinoderm embryos, propagating waves of Rho activity and F-actin assembly - cortical excitability - are amplified and focused at the equatorial cortex by the mitot...
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Cathy Spangler @cathyspangler.bsky.social · 22/09/2026
I'm excited to share our new preprint, where we show that fine-tuning gold nanoparticle conjugation to different Fab structural elements can produce powerful, rigidly coupled, labeling tools for in-situ cryo-ET. Take a look if you want to see an AuNP in an EM map!🔬🧠 www.biorxiv.org/content/10.6...
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Current Biology @currentbiology.bsky.social · 17/09/2026
New #cat just dropped! 😻 A first in over 100 years, a genomic study in CB by Eduardo Eizirik and team reveals a new species of 'tiger cat'. 👉 www.cell.com/current-biol... Meet the Tilcayo (Leopardus tilcayo)! (photo: Fernando Faciole/National Geographic) #cats
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Stacey Ogden 🦔 @labogden.bsky.social · 17/09/2026
I read the article about this 🐈 in Nat Geo - found by a man who thought it was a domestic kitten. After living with it for a year, he realized it was a wildcat 😲 🧪 Phylogenomics and museomics reveal five distinct species of tiger cats in South America: Current Biology www.cell.com/current-biol...
cell.com
Phylogenomics and museomics reveal five distinct species of tiger cats in South America
Lescroart, Nogales-Ascarrunz, et al. demonstrate that the contentious tiger cat species complex consists of five cryptic species. Based on analyses of 38 whole genomes from the Neotropical cat genus L...
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Lopes_Lab @lopeslab.bsky.social · 16/09/2026
Thrilled to share a new important study from the lab, published today in @nature.com, showing how cohesin mediates efficient replication fork plasticity and stress response, using its loop extrusion activity to promote 3D contacts on replicating DNA: www.nature.com/articles/s41...
nature.com
Cohesin reshapes replication fork contacts to aid fork slowing and reversal - Nature
Cohesin-mediated loop extrusion limits sister-fork coupling and tethers nearby replication forks under replication stress, promoting fork reversal and slowing fork progression to safeguard genome...
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Vijay Ramani @vram142.bsky.social · 14/09/2026
Everything you wanted to know about single-molecule epigenomics but were too afraid to ask! Wonderful to co-write (h/t ENORMOUS lift by @arnaudkr.bsky.social) this primer on our nascent field. Also, a 💯 example of wonderful colleagues building something *together*, not in competition =)
nature.com
A practical guide to studying genome function using single-molecule genomics
Nature Reviews Molecular Cell Biology - Single-molecule genomics methods are used to study the activity of regulatory factors on individual DNA molecules genome-wide, thereby enabling...
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Anton Goloborodko @golobor.bsky.social · 03/09/2026
1/ out in @science.org! We found a new asymmetry in large-scale chromosome structure: sister chromatids are shifted by hundreds of kb in the 5′→3′ direction of their inherited strands! A close collaboration w/ @gerlichlab.bsky.social , led by @flaviacorsi.bsky.social www.science.org/doi/10.1126/...
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Aaron Straight @astraight.bsky.social · 03/08/2026
These two reviews on centromeres and kinetochores in @natrevmcb.nature.com cap off @andrea-musacchio.bsky.social sabbatical at @stanfordbiochem.bsky.social from @valleefoundation.bsky.social. Long time in the making! Non-paywall versions rdcu.be/fxD9V, rdcu.be/fxEar
rdcu.be
Structure and function of the centromere and inner kinetochore
Nature Reviews Molecular Cell Biology - The kinetochore is a macromolecular complex that assembles on centromeric chromatin and connects spindle microtubules to the chromosome. This Review...
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UW–Madison Department of Biochemistry @uwbiochem.bsky.social · 03/08/2026
What can a microscopic organism in Lake Mendota teach us about cellular adaptation? The @cellraiser.bsky.social Lab is studying P. collini, a single-celled predator that reshapes its feeding structures to match changing conditions in its environment. Read the story: biochem.wisc.edu/2026/07/16/i...
biochem.wisc.edu
Investigating a Microscopic Predator in Madison’s Lakes
Researchers in the Coyle Lab have identified unusual growth patterns and their underlying biochemical mechanisms in a single-celled organism on the hunt.
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Scott Coyle @cellraiser.bsky.social · 02/07/2026
Had a blast putting this video abstract together with colleagues for @zjmaggiexu.bsky.social story in @currentbiology.bsky.social on how the "vampire cell" P. collini builds the perfect feeding trap 👀. Be sure to check out the full paper: www.cell.com/current-biol... www.youtube.com/watch?v=Ikzm...
youtube.com
A cellular vampire builds the perfect feeding trap / Curr. Biol., June 24, 2026 (Vol. 36, Issue 14)
YouTube video by Cell Press
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EMBO @embo.org · 30/06/2026
Welcome and congratulations to the 60 new members and 11 associate members who have been elected to the EMBO Membership! They join a community of more than 2,200 leading scientists. 🧪 www.embo.org/press-releases/seventy… #EMBOMembers2026
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Scott Coyle @cellraiser.bsky.social · 24/06/2026
@zjmaggiexu.bsky.social's story on suctorian trap structure adaptation is now online in @currentbiology.bsky.social , with new evolutionary analyses and modeling! This fall, Maggie will keep exploring predatory protists as a PD in @nbellono.bsky.social group; keep an eye out for her she's amazing!
sciencedirect.com
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Scott Coyle @cellraiser.bsky.social · 24/06/2026
Congratulations to Coyle-Lab alum @born2raisecell.bsky.social (now in Kole Roybal's lab at UCSF) on being selected for this! Very well-deserved -- can't wait to see what you do next
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Svetlana Dodonova @dodonova-sveta.bsky.social · 19/06/2026
Excited to share our new preprint! 🧬❄️ by brilliant @mdreimann.bsky.social and great collaborators! Using cryo-ET&EM, we reveal archaeal chromatin in a near-native state: variable-beads-on-a-string fibers shaped by growth phase and histone composition #ArchaeaSky www.biorxiv.org/content/10.6...
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Jan Huertas @janhuemar.bsky.social · 18/06/2026
Make sure to check our latest collaboration with @kaitezhang.bsky.social and @vram142.bsky.social. An effort to move towards simulating non-ideal, "in vivo" chromatin, and learning lots about chromatin organisation while doing it! @juliamaristany.bsky.social @rcollepardo.bsky.social
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paveltomancak.bsky.social @paveltomancak.bsky.social · 18/06/2026
Big paper from @hejnol.bsky.social lab. Title says it all. Congrats, Stanislav Kremnyov and the team. www.nature.com/articles/s41...
nature.com
A blastoporal organizer in a ctenophore - Nature
Experiments using the comb jelly Mnemiopsis leidyi and the sea anemone Nematostella vectensis reveal that the emergence of a core signalling pathway may have been a key innovation enabling the transit...
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Mark Peifer (He, him) @peiferlabunc.bsky.social · 18/06/2026
The array of organs in the animal body differ dramatically in their architecture, but cell-cell adhesion mediated by cadherins is a common principle. Our lab usually focuses on epithelia but cadherins are also active in migrating mesenchymal cells like these migrating testis myoblasts 1/n 🧪
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Vijay Ramani @vram142.bsky.social · 18/06/2026
JIT 4 summer, the latest preprint from our lab, brilliantly led by @kaitezhang.bsky.social w/ support from Collepardo lab (@juliamaristany.bsky.social / @janhuemar.bsky.social). www.biorxiv.org/content/10.6... describes a new single-molecule epigenomic method, & discoveries it enables ... (1/n)
biorxiv.org
Single-molecule nucleosome spacing coordinates chromatin fiber interactions
Nucleosome spacing influences higher-order chromatin fiber organization in vitro but how this relates to cellular chromosome structure remains contentious. To address this, we developed Ligation Analy...
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Scott Coyle @cellraiser.bsky.social · 16/06/2026
Sub-cellular architectures arise through integrating signaling and structure. @edenchang.bsky.social and @zjmaggiexu.bsky.social show how coupling reaction-diffusion signaling to protein condensation provides a tunable, regulatable landscape for sub-cellular structure www.biorxiv.org/content/10.6...
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Zhejing (Maggie) Xu @zjmaggiexu.bsky.social · 16/06/2026
Watching reaction-diffusion signaling couple to protein condensations feels like opening a new world of exotic subcellular spatial patterning 🌌 huge thanks to the evolving idea started from @edenchang.bsky.social and @cellraiser.bsky.social that make this journey possible and incredibly fun!
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edenchang.bsky.social @edenchang.bsky.social · 16/06/2026
www.youtube.com/watch?v=Gtd1...
youtube.com
Movie S1
YouTube video by Scott Coyle
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edenchang.bsky.social @edenchang.bsky.social · 16/06/2026
Excited to share our new bioRxiv preprint! We introduce RIPPLE, a synthetic platform that couples reaction–diffusion signaling with protein condensation to generate tunable intracellular architectures. Grateful to @zjmaggiexu.bsky.social and @cellraiser.bsky.social. It’s been a rewarding journey.
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Amy Weeks @amyweeks.bsky.social · 12/06/2026
Now online @pnas.org: We developed a simple, scalable, and accessible platform for deep profiling of phosphoeraser specificity using human phosphoproteome-derived peptide libraries (PhosPropels!) 🧪👩‍🔬https://www.pnas.org/doi/10.1073/pnas.2523183123
pnas.org
Phosphoproteome-derived peptide libraries for deep specificity profiling of phosphatases and phospholyases | PNAS
Protein phosphorylation is dynamically regulated by the opposing activities of phosphowriter enzymes (kinases) and phosphoeraser enzymes (phosphata...
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UW–Madison Department of Biochemistry @uwbiochem.bsky.social · 06/05/2026
Join us for Zhejing (Maggie) Xu's Ph.D. thesis defense on May 11! As a member of the @cellraiser.bsky.social Lab, Xu studied how predatory protozoa adapt cell morphology to optimize feeding efficiency in response to environmental demands. Learn more: ipib.wisc.edu/2026/04/17/i...
ipib.wisc.edu
IPiB Thesis Defense May 11, 2026: Zhejing “Maggie” Xu
Xu’s research in the Coyle Lab sought to understand how subcellular structures self-organize.
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Nature @nature.com · 05/05/2026
Nature research paper: Pervasive and programmed nucleosome distortion on single chromatin fibres go.nature.com/3RaDHuD
go.nature.com
Pervasive and programmed nucleosome distortion on single chromatin fibres - Nature
An analytical pipeline called Iteratively Defined Lengths of Inaccessibility (IDLI) maps the genome-wide occupancy of a range of nucleosome types and shows that most nucleosomes exhibit programmed ‘distortion’, in which the DNA exists mainly in a partially accessible state.
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Stefan Niekamp @niekamp.bsky.social · 25/04/2026
Excited to share our latest work in Molecular Cell: www.cell.com/molecular-ce... We show that PRC1 condensates exclude SWI/SNF from chromatin, revealing a physical mechanism for how opposing regulators compete to control gene expression. Huge thanks to all collaborators and mentors!
cell.com
Mutual antagonism between PRC1 condensates and SWI/SNF in chromatin regulation
Niekamp et al. show that biomolecular condensates formed by Polycomb repressive complexes can physically restrict access of the activating remodeler SWI/SNF to chromatin. Establishing this barrier dep...
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Nicholas Bellono @nbellono.bsky.social · 02/04/2026
Pablo Villar et al discover male octopus mating arms are sensory organs used to find females, navigate internally to the oviduct & deliver sperm. From behavior to structure, these findings offer a framework for how sensory systems shape reproduction & species barriers www.science.org/doi/10.1126/...
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Fred Hutch Basic Sciences Division @basicsci.fredhutch.org · 26/02/2026
Huge congratulations to the recipients of the 2026 Harold M. Weintraub Graduate Student Award! These twelve exceptional graduate students exemplify the bold, creative, and pioneering spirit embodied by Dr. Hal Weintraub. www.fredhutch.org/en/news/rele...
Top row, left to right: Keene Abbot, Gabriella Chua, Lifei Jiang, Won Jun Kim, Ruchita Kothari and Ayush Midha. Bottom row, left to right: Rohith Rajasekaran, Yusha Sun, Andrea Terceros, Wendy Valencia Montoya, Zachary Walsh and Peter Yoon.
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Keri Backus @keribackus.bsky.social · 06/02/2026
Excited to share our new paper and lipid- and protein-directed photocatalytic labeling method (POCA) just out in @natchembio.nature.com. tinyurl.com/2kcxuvvv. Big congrats to first author Andrew Becker and the whole team for launching our lab into the wild world of singlet oxygen interactomics.
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Brugues Lab @brugueslab.bsky.social · 28/01/2026
Really excited to share our new paper in @nature.com! We uncovered how a physical instability of the cytoplasm coupled with the cell cycle drives cytoplasmic partitioning in early embryos #zebrafish #drosophila. Read more in this🧵 www.nature.com/articles/s41... 🤩 @poldresden.bsky.social @mpi-cbg.de
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David Bartel's Lab @bartellab.bsky.social · 23/01/2026
We’re excited to share our latest preprint on the mechanism of excised linear intron stabilization in yeast! This work was led by PhD student @glennli.bsky.social and was a wonderful collaboration with @maxewilkinson.bsky.social. Link: www.biorxiv.org/content/10.6... (1/4)
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Rob Klose @robklose.bsky.social · 11/12/2025
An early Christmas present for those interested in chromatin and transcription! Fantastic work from @au-ho-yu.bsky.social and @aleksszczurek.bsky.social . Thanks to Inge and Michiel for their help. Please repost! www.biorxiv.org/content/10.6...
biorxiv.org
SET1/MLL complexes control transcription independently of H3K4me3
Histone H3 lysine 4 trimethylation (H3K4me3) at gene promoters is thought to play a central role in gene transcription. H3K4 methylation is deposited by the SET1 (A/B) and MLL (1-4) multi-protein comp...
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Christie Wilcox @nerdychristie.bsky.social · 09/12/2025
Talk about efficient packing! Those little black dots are nucleosomes in the most detailed look yet at how chromatin condenses. That and more of the best in @science.org and science in this edition of #ScienceAdviser: www.science.org/content/arti... 🧪
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Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 08/12/2025
Congratulations former postdoc @jfhevler.bsky.social (in transit to Roche) and the team on their work using thermal proteome profiling along with glycosylation perturbagens to discover glycan-dependent protein functions at the proteome scale 👏 www.biorxiv.org/content/10.6...
biorxiv.org
Discovering Glycosylation-Dependent Protein Function by Thermal Proteome Profiling
Protein glycosylation regulates essential cellular processes including protein folding, stability, and cell-cell interactions; however, how aberrant glycosylation impacts protein function and interact...
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Federico Teloni @fedeteloni.bsky.social · 04/12/2025
I am happy to share that my postdoctoral work in the @gerlichlab.bsky.social at @imbavienna.bsky.social is finally out 🎉! Our study reveals how cohesin guides focused and accurate homology search. Read more 👉 www.science.org/doi/10.1126/... Follow along for key insights and updates! 🧵
science.org
Cohesin guides homology search during DNA repair using loops and sister chromatid linkages
Accurate repair of DNA double-strand breaks (DSBs) is essential for genome stability, and defective repair underlies diseases such as cancer. Homologous recombination uses an intact homologous sequenc...
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Gerlich Lab @gerlichlab.bsky.social · 05/12/2025
Excited to share our latest fully in-house paper! 🎉 We show how cohesin integrates loop extrusion with sister tethering to guide the homology search during DNA repair. Huge congratulations to all authors, and to @fedeteloni.bsky.social for leading this work 👏 We’re excited to see his next steps!
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Rosana Collepardo @rcollepardo.bsky.social · 05/12/2025
Our Science paper is out! Huge congratulations to @huabin-zhou.bsky.social, Mike Rosen, and the brilliant @janhuemar.bsky.social @juliamaristany.bsky.social and @kieran-russell.bsky.social from our group News: bit.ly/4avnkAr and bit.ly/3XBGVHS Great perspective by @vram142.bsky.social +K Zhang
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Di Jiang @dijiang319.bsky.social · 05/12/2025
@science.org 🧬🔬 A vision of #chromosome organization | Science www.science.org/doi/10.1126/... @vram142.bsky.social et al.
science.org
A vision of chromosome organization
Cryogenic electron tomography of condensed chromatin enables multiscale analysis of its structure
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Di Jiang @dijiang319.bsky.social · 05/12/2025
@science.org 🧬🔬 Multiscale structure of #chromatin condensates explains phase separation and material properties | Science www.science.org/doi/10.1126/... @janhuemar.bsky.social et al.
science.org
Multiscale structure of chromatin condensates explains phase separation and material properties
The structure and interaction networks of molecules within biomolecular condensates are poorly understood. Using cryo–electron tomography and molecular dynamics simulations, we elucidated the structur...
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Jan Huertas @janhuemar.bsky.social · 04/12/2025
Super excited to share that our paper is now out in @science.org. Lots of work, but also lots of fun getting this out. Be sure to check it out! www.science.org/doi/10.1126/... Also, follow: @huabin-zhou.bsky.social @juliamaristany.bsky.social @kieran-russell.bsky.social @rcollepardo.bsky.social
science.org
Multiscale structure of chromatin condensates explains phase separation and material properties
The structure and interaction networks of molecules within biomolecular condensates are poorly understood. Using cryo–electron tomography and molecular dynamics simulations, we elucidated the structur...
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EMBL @embl.org · 27/11/2025
Anthony A. Hyman will become EMBL’s next Director General. He joins EMBL from @mpi-cbg.de in Dresden. He is also Professor of Molecular Biology @tudresden.bsky.social, and was a group leader at EMBL Heidelberg from 1993 to 1999. www.embl.org/news/people-...
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Feyza Engin @enginlab.bsky.social · 26/11/2025
Our new paper is out now in Nature Communications! We uncovered the function of XBP1 in beta cells of a preclinical model of T1D and identified unique and shared gene regulatory networks driven by IRE1 and XBP1. www.nature.com/articles/s41...
nature.com
Defining the role of β-cell IRE1α/XBP1 pathway and its gene regulatory network components in non-obese diabetic mice - Nature Communications
Modulating the unfolded protein response (UPR) can induce protective dedifferentiation of β-cells in non-obese diabetic mice. Here, the authors show that β-cell deletion of UPR transcription factor XB...
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Andy Moore @aaandmoore.bsky.social · 23/11/2025
Still posting cytoskeleton videos, it seems. Actin this time. Sample: Lifeact-eGFP in HeLa cells. Modality: Airyscan confocal Timestamp is mm:ss and the scale bar is 5 µm.
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Scott Coyle @cellraiser.bsky.social · 18/11/2025
Key transcripts encoded centrin-like proteins, a frequent component of sensory/contractile structures in protists. We visualized tentacle ultrastructure by U-ExM with @dudinlab.bsky.social lab, discovering stunning tip and collar structures 🤯that add structural complexity to new tentacle formation.
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Scott Coyle @cellraiser.bsky.social · 18/11/2025
Cellular structure self-organizes through an interplay between internal mechanisms and external cues. The single-celled suctorian P. collini builds a trap structure to capture large prey using microtubule feeding tentacles, creating feedback between cell morphology and prey availability.
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Scott Coyle @cellraiser.bsky.social · 18/11/2025
Finally – there are many mysteries to still resolve for these cells. From dramatic metamorphic capabilities🤯 to prey preference and detection mechanisms 🕵️. For anyone interested in collaborating or getting their hands on these cells, these fantastic beasts culture well and we’re happy to share!
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Scott Coyle @cellraiser.bsky.social · 18/11/2025
How do cells adapt morphology to function? In a 🔥 preprint by @zjmaggiexu.bsky.social , with @dudinlab.bsky.social and @amyweeks.bsky.social , we identify a self-organizing single-cell morphology circuit that optimizes the feeding trap structure of the suctorian P. collini. 🧵 tinyurl.com/4k8nv926
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Zhejing (Maggie) Xu @zjmaggiexu.bsky.social · 18/11/2025
Thrilled to share our work on the 🔥 single-celled predator Podophrya collini, which rewires its cell morphology to hunt more efficiently. Huge thanks to our amazing team—Amy, Lauren, Omaya, Marine, Mari, and especially Scott—for making this shine! ✨
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Rosana Collepardo @rcollepardo.bsky.social · 18/11/2025
Very excited to present OpenCGChromatin🔥🔥🔥 A new coarse-grained model that probes full chromatin condensates at near-atomistic resolution to reveal the molecular regulation of chromatin structure and phase separation Brilliantly led by @kieran-russell.bsky.social, with the Rosen and Orozco groups
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