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Amitesh Panda

@amiteshp.bsky.social
243 followers 147 following 11 posts

Interested in early human embryonic development, stem cells & epigenetics. Postdoctoral Researcher, @Max Planck Institute for Molecular Genetics, Berlin, Meissner Lab.

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Reposted by Amitesh Panda
Agnese Loda @agneseloda.bsky.social · 15/12/2025
Very happy to share our paper rdcu.be/eUImj out today in @natcellbio.nature.com 🎉🎉🎉 We uncover an unexpected role for endogenous Xist RNA in regulating X-linked genes that escape X-inactivation.
rdcu.be
Escape from X inactivation is directly modulated by Xist noncoding RNA
Nature Cell Biology - The authors show that increased Xist RNA levels can induce de novo silencing of genes that normally escape X inactivation. SPEN depletion prevents the silencing of escape...
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Vincent Pasque @pasquelab.bsky.social · 03/12/2025
We are excited to share our new preprint: SMARCA2/4-Dependent Chromatin Remodelling Establishes Gene Regulatory Programs in Early Human Embryos and Blastoids. www.biorxiv.org/content/10.64898/2025.12.01.691499v1
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Amitesh Panda @amiteshp.bsky.social · 25/11/2025
Our new preprint is out! 🎉 Happy and proud to have led this project during my PhD, and excited to share this story now as a preprint on bioRxiv. Grateful to my amazing mentors for their guidance and support: @crougeulle.bsky.social , @jfouimette.bsky.social, @pasquelab.bsky.social
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Max Planck Institute for Molecular Genetics @molgen.mpg.de · 25/11/2025
🔬 Hot #PhD topic: Single-molecule fluorescence and super-resolution microscopy! Use quantitative nanoscale imaging to map nuclear organization. Apply by Jan 7 to join Johannes Stein’s Lab @jmstein.bsky.social & #IMPRS-BAC #gradschool! 👉 www.molgen.mpg.de/5098010/stei...
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Max Planck Institute for Molecular Genetics @molgen.mpg.de · 14/11/2025
📢 Speaker showcase for our 2nd Meeting #Embryo2026 🧬Vincent Pasque @pasquelab.bsky.social from @kuleuvenuniversity.bsky.social will speak about his work on modelling early human embryogenesis with naïve pluripotent stem cells. More information👇 www.molgen.mpg.de/embryo2026
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Vincent Pasque @pasquelab.bsky.social · 07/07/2025
Exciting Research Professorship Position in Stem Cell and Developmental Biology at the University of Leuven. Amazing research ecosystem, great colleagues, high quality of life, tenure track. For those interested in joining us, please see below: www.kuleuven.be/personeel/jo...
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
#PhDDefense #BiomedicalSciences #DevelopmentalBiology #Epigenetics #StemCells #XChromosomeInactivation #Embryology #AcademicMilestone #PostdocSearch #LifeAsAPhD #ScienceLife #KULeuven
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
👨‍👩‍👧‍👦And of course, endless thanks to my family and friends and others. With that, I am now actively seeking exciting postdoctoral opportunities in the fields of developmental biology and epigenetics. Let’s connect!
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
👩‍⚖️ A heartfelt thanks to my PhD defense panel: Dr. Frederic Lluis, Dr. @leuccilrcb.bsky.social, Dr. Thorsten Boroviak, Dr. @maudborensztein.bsky.social, and Dr. Atilgan Yilmaz. I deeply appreciate your time, insightful questions, and valuable feedback.
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
🤝 Huge thanks to our collaborators: Dr. @crougeulle.bsky.social ,Dr. @jfouimette.bsky.social , Dr. @leo-carrillo.bsky.social , and all Rougeulle lab members; Dr. Frederic Lluis's lab; Dr. @nicolasrivron.bsky.social and others. 🙌
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
👨‍🏫 My deepest gratitude goes to my PI, Dr. Vincent Pasque @pasquelab.bsky.social , for his mentorship, trust, and constant support. To the entire Pasque Lab, thank you for being an incredible team and for your continued encouragement! 💙
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
🔬My research focused on how transcriptional and epigenetic regulation guide early human embryonic development, using stem cell–based embryo models and studying X-chromosome inactivation. This journey has been both an incredible challenge and a deeply rewarding experience. 🧠💭
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Amitesh Panda @amiteshp.bsky.social · 17/05/2025
🎓 PhD: Defended & Done! ✅ I am thrilled to share that I have successfully defended my PhD in Faculty of medicine, KU Leuven, Belgium! 🌟
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Development @dev-journal.bsky.social · 17/03/2025
In this Review, @eliananehme.bsky.social, @amiteshp.bsky.social, Isabelle Migeotte and @pasquelab.bsky.social give an overview of the embryonic origin and function of extra-embryonic mesoderm in vertebrates from in vivo studies. journals.biologists.com/dev/article/...
Figure 1 Schematics of extra-embryonic mesoderm development across species. (A) An intermediate stage of reptilian development displaying the vascularized trilaminar omphalopleure, also known as choriovitelline membrane, and the bilaminar omphalopleure. (B) A later developmental stage in squamates, showing a feature unique to squamates: the yolk cleft. The composition of the amnion, allantois and chorion is similar in all reptiles. (C) E1 (24 h) chick embryo showing the primitive streak, area vitellina and vasculosa. (D) E10 chick embryo displaying the localization of vascularized and non-vascularized extra-embryonic mesoderm (EXM) cells.
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Kaessmann Lab @kaessmannlab.bsky.social · 16/03/2025
How does gene regulation shape brain evolution? Our new preprint dives into this question in the context of mammalian cerebellum development! rb.gy/dbcxjz Led by @ioansarr.bsky.social, @marisepp.bsky.social and @tyamadat.bsky.social, in collaboration with @steinaerts.bsky.social
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Amitesh Panda @amiteshp.bsky.social · 15/03/2025
🎉 Excited to see our review on extraembryonic mesoderm is out in @dev-journal.bsky.social! An often-overlooked but crucial lineage in early embryo development. Also happy that a tree was planted in the Forest of Biologists for this work! 🌱🌳
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Development @dev-journal.bsky.social · 27/02/2025
We have an opening for a Reviews Editor on Development. If you love developmental biology and its academic community, and have an interest in publishing and science communication, this could be the role for you. Full details here: www.biologists.com/wp-content/u...
biologists.com
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Young Embryologist Network @yen-network.bsky.social · 30/01/2025
Registration and abstract submission for YEN 2025 is officially open! We are looking forward to seeing you at the 17th Young Embryologist Network Conference on the 19th May 2025. Attendence is FREE thanks to our amazing sponsors: @biologists.bsky.social @10xgenomics.bsky.social and Azenta.
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Miguel Branco @brancolab.bsky.social · 21/01/2025
We are hiring! 3-year BBSRC-funded postdoc position available. TEs, epigenetics, pregnancy: if you love one or more of these keywords, apply through the link below. Please spread the word.
qmul-jobs.tal.net
Postdoctoral Research Associate - QMUL Jobs
ID: 4897. Title: Postdoctoral Research Associate . Application Deadline:
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Vincent Pasque @pasquelab.bsky.social · 21/01/2025
Exciting community effort for robust feeder-free maintenance of human naive pluripotent stem cells with blastoid formation potential. Collaboration with @grazianomartello.bsky.social, @leeboratory.bsky.social @jzylicz.bsky.social @nicolasrivron.bsky.social tinyurl.com/5n6z9rt9
tinyurl.com
Feeder-free culture of naive human pluripotent stem cells retaining embryonic, extraembryonic and blastoid generation potential
Conventional human pluripotent stem cells (hPSCs) are widely used to study early embryonic development, generate somatic cells, and model diseases, with differentiation potential aligned to a post-imp...
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Juliane Glaser @julianeg.bsky.social · 16/01/2025
It’s official 🎉 I am excited to share that I will start my lab this spring at the Max Planck Institute for Immunobiology and Epigenetics @mpi-ie.bsky.social in beautiful Freiburg 🤩🗻☀️ I am looking forward to new collaborations and working with the fantastic community in Freiburg & its surroundings!
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Bristol BioDesign Institute @bristolbiodesign.bsky.social · 10/01/2025
📢 JOB VACANCY 4-Year Postdoc Position in Protein Design at @bristoluni.bsky.social Develop new peptides and proteins to manipulate, target and probe the mechanisms that underpin intracellular transport by microtubule motors. More: www.bristol.ac.uk/jobs/find-in... Deadline: 6 Feb 2025
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Nature Cell Biology @natcellbio.nature.com · 10/01/2025
NEW: Zhang & co identify the transcription factor GABPA as a regulator of #ZygoticGenomeActivation, epiblast formation and naive #pluripotency establishment. www.nature.com/articles/s41...
nature.com
The transcription factor GABPA is a master regulator of naive pluripotency - Nature Cell Biology
Zhang and colleagues identify the transcription factor GABPA as a regulator of zygotic genome activation, epiblast formation and naive pluripotency establishment.
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Robert Aboukhalil @robert.bio · 17/12/2024
🎁 New RNA-Seq tutorial! Learn to run differential expression analysis with DESeq2, and create your own bioinformatics projects using public data and the Expression Atlas 🧬 🖥️ youtu.be/NGbZmlGLG5w
youtu.be
RNA-seq tutorial with DESeq2: Differential gene expression project
YouTube video by OMGenomics
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FMI science @fmiscience.bsky.social · 16/12/2024
📣 Please share: We’re hiring a tenure-track Group Leader in Multicellular Systems to explore the molecular and cellular mechanisms driving the formation, maintenance, or destabilization of tissues, organs and organisms. Apply at: www.fmi.ch/education-ca...
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Stylianos Lefkopoulos (he/him) @slefkopoulos.bsky.social · 16/12/2024
#NCB2024 In June, Liu, Xie & co profiled putative cis-regulatory elements in mouse #oocytes and pre-implantation #embryos. They further identified the transcription factors TCF3 and TCF12 as key regulators of #folliculogenesis. rdcu.be/d3NiG www.nature.com/articles/s41...
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Mapping putative enhancers in mouse oocytes and early embryos reveals TCF3/12 as key folliculogenesis regulators
Nature Cell Biology - Liu, Xie and colleagues profile putative cis-regulatory elements in mouse oocytes and pre-implantation embryos. They further validate putative enhancers in oocytes and...
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Arnaud Krebs @arnaudkr.bsky.social · 13/12/2024
Registrations are open for the first edition of 'Gene regulation, one molecule at a time'! Very excited to bring #SingleMoleculeGenomics and #SingleMoleculeImaging community together @embl.org ! www.embl.org/about/info/c...
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James Briscoe @jamesbriscoe.bsky.social · 11/12/2024
I wrote some thoughts about why peer review matters It shapes scientific standards, maintains field coherence & trains new researchers Yes, it needs improvement—but it's the glue that holds scientific progress together briscoelab.org/2024/12/11/i...
briscoelab.org
In Praise of Peer Review
As an Editor of the journal Development, I often hear complaints about peer review. We all know the problems – from lengthy review times to requests for seemingly unnecessary experiments. I a…
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Erica Hutchins @drericabiophd.bsky.social · 30/11/2024
Thrilled our plasmid-based CRISPR-Cas13d knockdown approach in chick embryos 🐣 is now In Press @devbiol.bsky.social !! www.sciencedirect.com/science/arti...
sciencedirect.com
CRISPR-Cas13d as a molecular tool to achieve targeted gene expression knockdown in chick embryos
The chick embryo is a classical model system commonly used in developmental biology due to its amenability to gene perturbation experiments. Pairing t…
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Jamie Hackett @jamiehackett.bsky.social · 02/12/2024
Postdoc positions in epigenetics! We have several opportunities to investigate big picture questions on (epi)genome function & mechanisms Based @embl.org near Rome (Italy), we offer full scientific support/facilities, training & funding. Also...☀️🏛️🍕🏖️ See👇or contact me for other options. Pls RS
Advert detailing a postdoctoral scientist position at EMBL Rome. Contact: jamie.hackett@embl.it
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Science News @scinews.bsky.social · 30/11/2024
Here is a brief summary of academic journals and news account. Please help me add more accounts to this list! go.bsky.app/hCfhqn
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Jacob (Yaqub) Hanna - يعقوب حنا @jacob-hanna.bsky.social · 02/12/2024
Please check out this upcoming Gordon Conference (GRC) on Developmental Biology - March 2025 Very diverse and relevant topics! and Gordon Research Seminar (GRS) accompanying it as well ! (speaker list in commentts) www.grc.org/developmenta...
grc.org
2025 Developmental Biology Conference GRC
The 2025 Gordon Research Conference on Developmental Biology will be held in Pomona, California. Apply today to reserve your spot.
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Mitch Guttman @mitchguttman.bsky.social · 27/11/2024
Gene regulation involves thousands of proteins that bind DNA, yet comprehensively mapping these is challenging. Our paper in Nature Genetics describes ChIP-DIP, a method for genome-wide mapping of hundreds of DNA-protein interactions in a single experiment. www.nature.com/articles/s41...
nature.com
ChIP-DIP maps binding of hundreds of proteins to DNA simultaneously and identifies diverse gene regulatory elements - Nature Genetics
ChIP-DIP (ChIP done in parallel) is a highly multiplex assay for protein–DNA binding, scalable to hundreds of proteins including modified histones, chromatin regulators and transcription factors, offe...
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Michelle Percharde @mpercharde.bsky.social · 26/11/2024
Happy to share our first #bluetorial & our latest #preprint, lead by postdoc @paulchammas.bsky.social. We used CRISPRa to disentangle the close relationship between Dux and MERVL elements in the induction of the 2-cell like state: #TEsky #MERVL www.biorxiv.org/content/10.1... (1/8)
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Jamie Hackett @jamiehackett.bsky.social · 26/11/2024
📢 Preprint! How does the environment of a father before conception influence offspring? Even more, how do paternal genetics & ages interact with exposures to affect F1 outcome? We tested this systematically, with intriguing findings & some cautionary tales🧵... www.biorxiv.org/content/10.1...
biorxiv.org
Embryonic Signatures of Intergenerational Inheritance across Paternal Environments and Genetic Backgrounds
The paternal preconception environment has been implicated as a modulator of phenotypic traits and disease risk in F1 offspring. However, the prevalence and mechanisms of such intergenerational epigen...
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British Society for Developmental Biology @bsdb.bsky.social · 25/11/2024
🚨Abstract deadline- 13th December! 🚨 Join us next March in Liverpool for our Spring Meeting, joined with the BSCB and part of the Biologists@100 @biologists.bsky.social 🎉 Not to be missed! We have annual meetings grants! Next deadline is the 10th of Jan. +Info here : bsdb.org/membership/#...
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Kasia Siudeja @ksiudeja.bsky.social · 25/11/2024
📣📣📣 Come join us and set up your team in the I2BC Cell Bio Dept! You will find great science, diverse topics and models, spacious labs, supportive environment, and fun colleagues. We are a short (train) ride south of Paris. Please DM me with any questions and help us spread the word 🙏
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Vincent Pasque @pasquelab.bsky.social · 11/11/2024
First post on this platform! Check out our review on" "Early human development and stem cell-based human embryo models" @CellStemCell www.cell.com/cell-stem-ce...
cell.com
Early human development and stem cell-based human embryo models
Stem cell-based models of the human embryo promise to transform the study of human embryogenesis. In this review, we discuss our current knowledge of the first 2 weeks of human embryo development and ...
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Yad Ghavi-Helm @yghavi.bsky.social · 18/11/2024
🚨Preprint alert! tinyurl.com/2zkmynsd Did you ever dream of reconstruction #spatial single-cell #enhancer activity in a multicellular organism using massively parallel enhancer-reporter assays? Then Spatial-scERA is the method for you! #spatialOMICs
tinyurl.com
Spatial reconstruction of single-cell enhancer activity in a multicellular organism
Enhancers play an essential role in developmental processes by orchestrating the spatial and temporal regulation of gene expression. However, mapping the location of these regulatory elements in the g...
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Amitesh Panda @amiteshp.bsky.social · 18/11/2024
www.biorxiv.org/content/10.1... Chromosomal Instability in Human Trophoblast Stem Cells and Placentas
biorxiv.org
Chromosomal Instability in Human Trophoblast Stem Cells and Placentas
The human placenta, a unique tumor-like organ, is typically thought to exhibit rare aneuploidy associated with adverse pregnancy outcomes. Discrepancies in reported aneuploidy prevalence in placenta l...
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Amitesh Panda @amiteshp.bsky.social · 14/11/2024
Hi, could you please add me🙂
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Soragni:Lab @alice.soragnilab.com · 11/11/2024
We have a very basic starter pack!! If you work on 3D biology and organoids broadly defined and want to be included, leave a comment below go.bsky.app/QeDg2YD
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Will Macnair @willmacnair.bsky.social · 07/11/2024
I made a starter pack for single cell and spatial people on BlueSky! 🧬🧪🥳 I’m certain it’s very incomplete, so please just let me know if you’d like to be included 😊 go.bsky.app/U57Mar8
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Teresa Rayon @trayon.bsky.social · 14/11/2024
2nd edition of the EMBO Workshop on Dev timing & evolution will take place in Paris. 6-9 May 2025. Save the date!!! coming-soon.embo.org/w25-105
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Ozren Bogdanovic @obog.bsky.social · 14/11/2024
We have 15 PhD positions available as part of the DANIO-ReCODE MSCA DN 🇪🇸🇩🇪🇸🇮🇭🇷🇦🇹🇬🇧 Great opportunity for anyone interested in developmental biology, regeneration, genomics, and computational sciences. For project descriptions and how to apply, check: euraxess.ec.europa.eu/jobs/290548
euraxess.ec.europa.eu
15 PhD positions in Decoding Transcriptional Regulation in Regeneration by Advanced Genomics and Computational tools (funded by the DANIO-ReCODE MSCA 2023 Doctoral Network)
The principal objective of DANIO-ReCODE is to provide world-class doctoral training to a new generation of early-career researchers interested in understanding the complex and multilayered process of ...
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