Sign in

Sristi

@sristi.bsky.social
896 followers 585 following 13 posts

One thought at a time, ten stops deep.. #DevelopmentalBiology #CellBiology #mechanobiology Student@KanazawaUniversity @preLights.bsky.social

PostsRepliesMedia
Reposted by Sristi
Development @dev-journal.bsky.social · 05/09/2026
Preprint highlights in extracellular biology Read these @prelights.bsky.social posts relevant to our special issue #DevSIextracellular by @fadelvalle.bsky.social, Sristilekha Nath, @kanishka03.bsky.social, Zoha Sadaqat and @jontytownson.bsky.social. journals.biologists.com/dev/article/...
Screenshot of preprint highlights in extracellular biology.
014
Reposted by Sristi
Oded Rechavi @odedrechavi.bsky.social · 19/08/2026
Lab meetings can be the worst, or the best! :) Here are 22 tips for improving them (including mine) www.nature.com/articles/d41... @nature.com
nature.com
Twenty-two easy ways to power up your lab meetings
Scientists share help and advice on how they got their research discussions flowing.
06624
Reposted by Sristi
preLights @prelights.bsky.social · 07/07/2026
Exciting #preprints in nuclear cell biology. As part of the latest Special Issue in @jcellsci.bsky.social, this article bundles together relevant #preLights. preLighters involved include @pierrecaron.bsky.social, Abby, Reinier @sristi.bsky.social & Filipe journals.biologists.com/jcs/article/...
journals.biologists.com
Preprint highlights in nuclear cell biology
This article features recent preLights that discuss preprints relevant to this ‘Cell Biology of the Nucleus’ special issue.preLighterPierre Caron, CNRS researcher at the Institute of Structural Biolog...
066
Reposted by Sristi
paveltomancak.bsky.social @paveltomancak.bsky.social · 13/12/2025
#Mastodon, the Command Center for Large-Scale Lineage-Tracing Microscopy Datasets, is finally heading for publication (well, let's see). To #cite or not to cite shall no longer be the question 🙃, because the #preprint. Software is available in every #Fiji near you. www.biorxiv.org/content/10.6...
112452
Reposted by Sristi
the Node @the-node.bsky.social · 13/11/2025
You must have been looking forward to... October in preprints! Check out the latest #preprints on #DevBio, #StemCell biology and related topics with, starting this month, @prelights.bsky.social picks 👇👀 thenode.biologists.com/october-in-p...
thenode.biologists.com
October in preprints - the Node
Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints. The preprints this month are hosted on bioRxiv.
0179
Reposted by Sristi
preLights @prelights.bsky.social · 13/11/2025
Do you love the monthly #preprint lists on @the-node.bsky.social? Good news, our #preLighters have teamed up with the Node to nominate standout articles and share one-paragraph insights on why they’re excited. Check out their October highlights ⬇️ 👀 thenode.biologists.com/prelighters-...
thenode.biologists.com
preLighters’ choice - October’s handpicked preprints - the Node
Concise preprint highlights from the October preprint list, prepared by the preLighter community. Quick reads from early-career researchers to help working scientists spot the month’s most exciting bi...
0147
Reposted by Sristi
Campàs Lab @campaslab.bsky.social · 28/10/2025
Really excited to present the results of a fantastic collaboration with Jesse Veenvliet @jesseveenvliet.bsky.social @mpi-cbg.de @poldresden.bsky.social 🤩 We find a unique mechanism for body axis elongation in mammals, different from other vertebrate species ➡️ www.biorxiv.org/content/10.1...
614347
Reposted by Sristi
Kate Cavanaugh @katecavanaugh.bsky.social · 01/10/2025
See this? This = implanting mouse embryo. Usually this happens inside its mother and is invisible to us, but we can actually watch implantation ex vivo with the hope of understanding why implantation goes awry in embryos of older women. A 🧵...
1125881
Reposted by Sristi
preLights @prelights.bsky.social · 01/10/2025
Happy October 1st! A good time to share another #CellBio #preprint reading list put together by a team of preLighters: @sristi.bsky.social, Matthew Davies, @vibhasingh.bsky.social, @fadelvalle.bsky.social & Barbora Knotkova. Check out their picks ⬇️👀 prelights.biologists.com/prelists/sep...
prelights.biologists.com
September in preprints – Cell biology edition - preLights
064
Reposted by Sristi
Sara Wickstrom @sarawickstrom.bsky.social · 29/09/2025
How do #stemcells integrate information to coordinate fate decisions? Delighted to finally see our work showing how growth factors regulate the mechano-osmotic state of the #nucleus and #chromatin to control #pluripotency exit out! www.nature.com/articles/s41... see 🧵 👇
nature.com
Mechano-osmotic signals control chromatin state and fate transitions in pluripotent stem cells - Nature Cell Biology
McCreery, Stubb et al. show that mechano-osmotic changes in the nucleus induce general transcriptional repression and prime chromatin for cell fate transitions by relieving repression of specific differentiation genes.
1017474
Reposted by Sristi
Yu-Chiun Wang @yuchiunwang.bsky.social · 04/09/2025
Tissue 'tectonic' collision is detrimental, but flies found two distinct solutions! Gratifying and grateful to be included in this collective effort, w/ Steffen Lemke, to crack the (or 'a') code of #cephalicfurrow, now out in @nature.com, all with @paveltomancak.bsky.social at the helm. (1/9)
24915
Reposted by Sristi
Akankshi Munjal @akankshi.bsky.social · 26/09/2025
Our latest preprint! Into morphogenesis, Yap, ECM, signaling, vertex models, feedbacks/robustness? There is something here for everyone. We discovered a positive feedback loop that extends inner ear canals, and a built-in mechanism that shuts it down when morphogenesis is done. tinyurl.com/464wsjhd
48027
Reposted by Sristi
sameerthukral.bsky.social @sameerthukral.bsky.social · 12/09/2025
Excited to share our new review in Development, Growth and Differentiation(DGD) Journall! With the amazing @yuchiunwang.bsky.social & @bipashadey29.bsky.social,we explore how rigidity transitions bridge cytoplasmic & tissue scales. Read the full review: onlinelibrary.wiley.com/doi/full/10....
onlinelibrary.wiley.com
Integrating Tissue and Cytoplasmic Rigidity Transitions During Morphogenesis
Multicellular organisms generate organizational complexity through morphogenesis, in which mechanical forces orchestrate the movements and deformations of cells and tissues, while chemical signals re...
1135
Reposted by Sristi
preLights @prelights.bsky.social · 05/08/2025
Cancer cells that survive, thrive: capillary constrictions as a trigger of mechanotransduction in cancer progression. Check out this #preLight by Sristilekha Nath, which talks about the work by @gsilvani.bsky.social, @kriskilian.bsky.social and the team.
prelights.biologists.com
Capillary constrictions prime cancer cell tumorigenicity through PIEZO1 - preLights
Cancer cells that survive, thrive: capillary constrictions as a trigger of mechanotransduction in cancer progression
031
Reposted by Sristi
James Briscoe @jamesbriscoe.bsky.social · 04/08/2025
A Summer reading recommendation: new primer in @dev-journal.bsky.social explains how dynamical systems theory unlocks the logic of developmental patterning Everything from bistable switches & oscillators to phase portraits & more with Python code to explore journals.biologists.com/dev/article/...
journals.biologists.com
From genes to patterns: five key dynamical systems concepts to decode developmental regulatory mechanisms
Summary: Dynamical systems theory provides a powerful quantitative and intuitive framework to understand developmental processes. This Primer brings key concepts of this framework to the ever-growing ...
09536
Reposted by Sristi
Peter O'Toole @yorkbioimaging.bsky.social · 28/04/2025
CellPhePy is now available 🎉🎉🎉 in the journal of #microscopy. A python version for #CellPhe. See doi.org/10.1111/jmi.... Thanks @ukri.org and @wellcometrust.bsky.social for funding @globias.bsky.social @globalbioimaging.bsky.social @eurobioimaging.bsky.social @bioimaginguk.bsky.social
doi.org
CellPhePy: A python implementation of the CellPhe toolkit for automated cell phenotyping from microscopy time‐lapse videos
We previously developed the CellPhe toolkit, an open-source R package for automated cell phenotyping from ptychography time-lapse videos. To align with the growing adoption of python-based image anal...
03012
Reposted by Sristi
Lucie Zilova @zilova.bsky.social · 23/04/2025
Happy to share our new preprint on lens morphogenesis in ocular organoids. All thanks to Elin Stahl, Miguel Angel Delgado-Toscano, Ishwariya Saravanan, Anastasija Paneva and Jochen Wittbrodt @wittbrodtlab.bsky.social www.biorxiv.org/content/10.1...
0189
Reposted by Sristi
Claire Dessalles @clairedessalles.bsky.social · 18/04/2025
Very happy and excited to share our latest work linking actin nematodynamics and endothelial cell mechanics under anisotropic tension, now published in @natphys.nature.com ! rdcu.be/eigWi @ipparis.bsky.social @polytechniqueparis.bsky.social
rdcu.be
Interplay of actin nematodynamics and anisotropic tension controls endothelial mechanics
Nature Physics - Blood flow through a vessel deforms vessel walls. Cells lining these walls sense the changes in pressure as blood flows and reorient their actin fibres in the direction of largest...
97626
Reposted by Sristi
preLights @prelights.bsky.social · 08/04/2025
It’s about time to share the March #CellBio preprint picks! 8 preLighters (@girishkalephd.bsky.social, @fadelvalle.bsky.social, @ethanewe.bsky.social, @sristi.bsky.social, @vibhasingh.bsky.social, @deevithab.bsky.social) teamed up to curate this #preList ⬇️ prelights.biologists.com/prelists/mar...
prelights.biologists.com
March in preprints – the CellBio edition - preLights
064
Reposted by Sristi
Thibaut Brunet @thibautbrunet.bsky.social · 03/04/2025
Striking new study from @archaeon-alex.bsky.social's lab just out in @science.org on multicellular development induced by compression in Archaea: www.science.org/doi/10.1126/...
science.org
Tissue-like multicellular development triggered by mechanical compression in archaea
The advent of clonal multicellularity is a critical evolutionary milestone, seen often in eukaryotes, rarely in bacteria, and only once in archaea. We show that uniaxial compression induces clonal mul...
6343134
Reposted by Sristi
Itai Yanai @itaiyanai.bsky.social · 01/04/2025
The more jargon you have in your paper the less citations you'll get. royalsocietypublishing.org/doi/10.1098/...
1348
Reposted by Sristi
Zebrafish Rock! @zebrafishrock.bsky.social · 16/03/2025
3D reconstruction of a 3-day-old #zebrafish heart beating. Credit to Michael Weber (prev. @mpi-cbg.de). #ZebrafishZunday 🧪
312725
Reposted by Sristi
Eszter Posfai @eposfai.bsky.social · 05/03/2025
A duo of preprints on the dynamics of the first cell fate decision in mouse by Madeleine Chalifoux (first grad student in the lab!) and Maria Avdeeva (Flatiron). We use quantitative live imaging of key cell fate determinants to follow the segregation of inner cell mass and trophectoderm lineages.
12611
Reposted by Sristi
preLights @prelights.bsky.social · 05/03/2025
This CellBio #preList is yet another great team effort! #community #ECRs Many thanks Barbora, Matthew, @sristi.bsky.social , @girishkalephd.bsky.social, Prasanna, Vibha & @fadelvalle.bsky.social for putting it together! 🙌 #preLighters
055
Reposted by Sristi
preLights @prelights.bsky.social · 25/02/2025
Check out our latest podcast episode ( #spotLights ) in which we talk to the creator of #tidyplots: Jan Broder Engler🎙 Ep. 7 🎧: www.youtube.com/watch?v=o0kl... Also, please take a look at the related #preLights post prepared by Felipe Del Valle Batalla: prelights.biologists.com/highlights/t...
youtube.com
spotLights Ep 7: preLights in conversation with Jan Broder Engler
YouTube video by The Company of Biologists
086
Reposted by Sristi
Erdinc Sezgin @sciezgin.bsky.social · 19/02/2025
New paper out 🎇 It has been 13 years since @owenlabuob.bsky.social and co. published a stellar protocol on how to measure membrane order with smart probes! Since then, there has been new dyes, imaging modes and biology! We wrote a protocol for Nature Protocols: www.nature.com/articles/s41...
nature.com
Measuring plasma membrane fluidity using confocal microscopy - Nature Protocols
Membrane fluidity is a crucial feature in understanding cellular physiology. This protocol describes a robust pipeline for measuring plasma membrane fluidity using confocal imaging and new environment...
17323
Reposted by Sristi
Dave Barry @david-j-barry.bsky.social · 11/02/2025
Here it is, in collaboration with @lankylaste.bsky.social, Lina Gerontogianni & Gavin Kelly: www.biorxiv.org/content/10.1... * Stats tests often used inappropriately * Masses of data points are often unnecessary * Inferring biological significance almost impossible without appropriate controls
biorxiv.org
Enhancing Reproducibility Through Bioimage Analysis: The Significance of Effect Sizes and Controls
Bioimage analysis is a powerful tool for investigating complex biological processes, but its robustness depends on both technical precision and rigorous experimental design. In particular, the use of ...
0108
Reposted by Sristi
the Node @the-node.bsky.social · 04/02/2025
Deforming Nuclei: a way to move through the crowd! Read this #BehindthePaper story from Mariana Maia-Gil about the work @nordenlab.bsky.social, looking into how nuclear properties influence nuclear positioning in the densely packed🐟retinal neuroepithelium: thenode.biologists.com/deforming-nu...
thenode.biologists.com
Deforming Nuclei: a way to move through the crowd! - the Node
In their recent paper, Maia-Gil and colleagues explored whether and how nuclear properties can influence nuclear positioning in vivo. Their work revealed
0113
Reposted by Sristi
preLights @prelights.bsky.social · 03/02/2025
📃January in preprints – the CellBio edition This latest cell biology #preList was curated by Barbora Knotkova, Vibha Singh, Matthew Davies, @fadelvalle.bsky.social and @girishkalephd.bsky.social Explore their favourite #CellBio #preprints! ⬇️
prelights.biologists.com
January in preprints – the CellBio edition - preLights
093
Reposted by Sristi
FocalPlane @focalplane.bsky.social · 24/01/2025
Check out our latest #preprint list on FocalPlane. This week we focus on bioimage analysis tools and their application to biological images. focalplane.biologists.com/2025/01/24/m...
focalplane.biologists.com
Microscopy preprints - bioimage analysis - FocalPlane
Microscopy preprints - bioimage analysis - News
1156
Reposted by Sristi
Felipe del Valle Batalla @fadelvalle.bsky.social · 22/01/2025
Years ago I had several philosophy of science questions that are clearly addressed in this book www.cambridge.org/core/element... great to read!
cambridge.org
Explanation in Biology
Cambridge Core - Philosophy of Science - Explanation in Biology
022
Reposted by Sristi
Roux Lab, Geneva @rouxlab.bsky.social · 20/01/2025
Yamini @yamini-ravichan.bsky.social changed the topology of Hydra to show that actin orientational defects of Hydra induce the full program of head regeneration: www.science.org/doi/10.1126/... Mechanics controls development! Thanks to Dan Pearce, Karsten Kruse, Matthias Vogg & Brigitte Galliot.
37230
Reposted by Sristi
Aafke Gros @aafkegros.bsky.social · 15/01/2025
Microscopy Nodes is now up on bioRxiv! 🚀 This is a Blender extension that seamlessly integrates and visualizes 3D microscopy data (TIF & @zarr.dev). High-quality volume rendering for anyone, in both EM and fluorescence, regardless of computational expertise! 🔬 www.biorxiv.org/content/10.1...
FIB-SEM dataset visualized with Microscopy Nodes, data from Mocaer et al 2023
9330124
Reposted by Sristi
Magdalena Skipper @magdalenaskipper.bsky.social · 14/01/2025
‘Expansion microscopy’ turns ten: how a tissue-swelling method brought super-resolution imaging to the masses @nature.com @natureportfolio.bsky.social 🧪 www.nature.com/articles/d41...
nature.com
‘Expansion microscopy’ turns ten: how a tissue-swelling method brought super-resolution imaging to the masses
A decade in, expansion microscopy is unlocking insights across biology and medicine.
05220
Reposted by Sristi
Jan Lammerding - Lab @lammerdinglab.bsky.social · 29/12/2024
Exciting work by Martin Beck’s group @mpibp.bsky.social providing further evidence for nuclear pores responding to mechanical stress. The work includes some nice modeling estimating the fluid flow across nuclear pores as a function of (osmotic) pressure. www.cell.com/molecular-ce...
cell.com
Nuclear pore permeability and fluid flow are modulated by its dilation state
Hoffmann et al. describe within cells how the Dictyostelium discoideum nuclear pore complex structure constricts and dilates as a consequence of osmotic stress. Based on their experimental findings, they propose a hydrodynamics model and quantify fluid flow across nuclear pore complexes under conditions when nuclei change their volume rapidly.
14718
Reposted by Sristi
canaztekin.bsky.social @canaztekin.bsky.social · 06/01/2025
🚨Why can’t mammals regenerate legs or arms like frog tadpoles or salamanders? Our preprint tackles (part of) this BIG question with surprising findings about oxygen sensing 🔗 www.biorxiv.org/content/10.1... Happy New Year, everyone! 🎉 🐭 vs 🐸 #evodevo #regenerative #cellbio 🧵👇
36227
Reposted by Sristi
preLights @prelights.bsky.social · 30/12/2024
Finishing the year strong with another cell biology preList! 🙌 This month the list was curated by Matthew Davies, @fadelvalle.bsky.social, Sristilekha Nath, @girishkalephd.bsky.social & Barbora Knotkova Explore their favourite #CellBio #preprints! #preList⬇️ prelights.biologists.com/prelists/dec...
prelights.biologists.com
December in preprints - the CellBio edition - preLights
064
Reposted by Sristi
preLights @prelights.bsky.social · 18/12/2024
Extra, extra! Read the latest on how journalists interpret and report on scientific research 📢📰 Read this collaborative #preLight from @isabellaclsci.bsky.social @sristi.bsky.social @bdmaier.bsky.social & team covering work from Alice Fleerackers et al. ⬇️👀 prelights.biologists.com/highlights/f...
prelights.biologists.com
From impact metrics and open science to communicating research: Journalists’ awareness of academic controversies - preLights
Extra, extra! Read the latest on how journalists interpret and report on scientific research.
043
Reposted by Sristi
FocalPlane @focalplane.bsky.social · 16/12/2024
📢Now up on FocalPlane: Probes 101 – How to choose a fluorescent probe for your imaging experiment. Lina El Hajji talks us through the optimal photophysical properties & weighs up the pros & cons of FPs versus small molecule dyes & the options in between! focalplane.biologists.com/2024/12/14/p...
focalplane.biologists.com
Probes 101 – How to choose a fluorescent probe for your imaging experiment - FocalPlane
Probes 101 – How to choose a fluorescent probe for your imaging experiment - Tools
04513
Reposted by Sristi
The Company of Biologists @biologists.bsky.social · 15/12/2024
🧪 We have made it easier to follow our journals and community sites with our new starter pack. go.bsky.app/BwC3bSV
38941
Reposted by Sristi
Zebrafish Rock! @zebrafishrock.bsky.social · 15/12/2024
Full spectrum of ‘zebrabow’ embryos. Credit to @jhenninger.bsky.social. #ZebrafishZunday 🧪
Line of zebrabow embryos that have different colors based on the cell lineage. They are sorted by color to form a rainbow.
318534
Reposted by Sristi
Current Biology @currentbiology.bsky.social · 19/11/2024
You asked for it...
401832324
Reposted by Sristi
Aki Teranishi @aki-teranishi.bsky.social · 12/12/2024
Excited to share our latest work published in Nature Communications! We reported an elastoplastic property of epithelia that determines the irreversibility of folding and is regulated in a mechanosensitive manner. #Mechanobiology #Biophysics #Developmentalbiology www.nature.com/articles/s41...
nature.com
An actin bracket-induced elastoplastic transition determines epithelial folding irreversibility - Nature Communications
During morphogenesis, epithelial folding is irreversible, ensuring that the process proceeds in one direction. Here, the authors report that, given sufficient curvature or duration of a fold, these ce...
0114
Reposted by Sristi
BWJones @bwjones.bsky.social · 08/12/2024
Developing eyes bryanwjones.com/2020/01/deve... #SciArt #retina
A developing retina processed with computational molecular phenotyping (CMP) to reveal the metabolic signals inside of the retina with photoreceptors, ganglion, amacrine, and bipolar cells. GABA, glycine and glutamate are the small molecules.
114420
Reposted by Sristi
Xavier Trepat @xaviertrepat.bsky.social · 03/12/2024
🎈New preprint! We study how single cells move up, down and about fibronectin gradients. Experiments by @icfortunato.bsky.social, theory by David Bruckner. Collaboration with @raimonsunyer.bsky.social and @ehannezo.bsky.social 👇https://biorxiv.org/cgi/content/short/2024.12.02.626413v1
519147
Sristi @sristi.bsky.social · 04/12/2024
Check out our first list comprising preprints of #cellbio
040
Reposted by Sristi
The Company of Biologists @biologists.bsky.social · 25/11/2024
We are happy to report that our journals and community sites now have Bluesky accounts. Follow them at: @dev-journal.bsky.social @jcellsci.bsky.social @jexpbiol.bsky.social @dmmjournal.bsky.social @biologyopen.bsky.social @the-node.bsky.social @prelights.bsky.social @focalplane.bsky.social
10437211
Reposted by Sristi
Felipe del Valle Batalla @fadelvalle.bsky.social · 18/11/2024
go.bsky.app/Tz6SV7j Jump in! If you’re interested in the expanding community of PreLights. @reinierprosee.bsky.social
024
Reposted by Sristi
Eszter Posfai @eposfai.bsky.social · 20/11/2024
Check out our new paper in @currentbiology.bsky.social by amazing grad students @ezlevy.bsky.social and @isabellaleite.bsky.social “A tug-of-war between germ cell motility and intercellular bridges controls germline cyst formation in mice” authors.elsevier.com/a/1k7fg3QW8S...
78925
Reposted by Sristi
Maik Bischoff @maikbischoff.bsky.social · 19/11/2024
Even though there are great #devbio and #biophysics starter packs, I felt #morphogenesis & #organogenesis was missing as a subfield :D Far from complete or full. Tell me if you want to be added! go.bsky.app/PB6s8PQ
7213589