Reposted by Stefania MarcottiLondon BioImage Interest Group @biig-ucl.bsky.social · 17/08/2026We are excited to share that the first session of London BIIG will be on Friday 11th September at 12pm at the LMCB! Talks: Yongjoo Kim (UCL) & Nina Thornton (Crick) #l-biig Refreshments will be provided. Directions for LMCB can be found on our website. 1188
Reposted by Stefania MarcottiBioImagingUK @bioimaginguk.bsky.social · 24/03/2026🐍 Learn Python for Image Analysis — for free! UK life scientists: join EuroBioImaging's hands-on beginner course at The Crick in London (23–25 June), running simultaneously with sites in CZ, PT and SWE! ⏰ Register by 15 April — places are limited! ✈️ Travel funding may be available shorturl.at/v3Vsk 21911
Stefania Marcotti @lankylaste.bsky.social · 27/02/2026Save the date! We’re back at the @crick.ac.uk next November! 041
Reposted by Stefania MarcottiRoyal Microscopical Society @royalmicrosoc.bsky.social · 11/02/2026Happy International Day of Women and Girls in Science! #WomenInScience 🌍👩🔬🔬 We're dedicated to supporting equality in #microscopy, #imaging and #FlowCytometry - including maintaining a positive gender balance for speakers attending international events. Find out more: ow.ly/VbVw50YcIL4 096
Reposted by Stefania MarcottiBioImagingUK @bioimaginguk.bsky.social · 02/02/2026🔬UK researchers: Access cutting-edge bioimaging tech + expert support with our User Access Fund! 💷 £5k for imaging 💷 £2k for image analysis Choose from 6 top UK facilities, contact them, then apply! rms.org.uk/user-access-fund ⏰ Next deadline: 31 March ✅ Decision in 4 weeks Pls share! 11514
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 27/01/2026We are hosting an #Ilastik workshop on March 27th, led by Dominik Kutra, senior research software engineer @ilastik-team.bsky.social The course is open to students and staff at @crick.ac.uk and partner universities (@ucl.ac.uk, @kingscollegelondon.bsky.social and @imperialcollegeldn.bsky.social) 1129
Reposted by Stefania MarcottiCrick Light Microscopy @calm-stp.bsky.social · 19/01/2026We Are hiring!! 👨💻👩💻 CALM's new Data and Systems Steward Role is live 🎉https://crick.wd3.myworkdayjobs.com/External/job/London/Data-and-Systems-Steward_R2551 closing date 8th Feb!crick.wd3.myworkdayjobs.comData and Systems StewardSalary for this Role: From £43,630 with benefits, subject to skills and experience. Job Title: Data and Systems Steward Reports to: Kurt Anderson Closing Date: 08/Feb/2026 23.59 GMT Job Description: D... 01011
Reposted by Stefania MarcottiDave Barry @david-j-barry.bsky.social · 15/01/2026Time is running out to apply for this year's @royalmicrosoc.bsky.social Intro to Image Analysis course in Cardiff - deadline is tomorrow! Spread the word!media.tenor.comtwo men are sitting in front of a large clock that shows a time of 11:55ALT: two men are sitting in front of a large clock that shows a time of 11:55 066
Reposted by Stefania MarcottiFocalPlane @focalplane.bsky.social · 13/01/2026Jacqueline Chalakova, @afoix.bsky.social and @denzibubs.bsky.social share their highlights from #CBIAS2025 @cbias.bsky.social, with all three emphasising the welcoming atmosphere. Check out the reasons that #CBIAS2026 should be in your calendar⤵️ focalplane.biologists.com/2026/01/12/c...focalplane.biologists.comCrick BioImage Analysis Symposium (2025) - a review - FocalPlaneCrick BioImage Analysis Symposium (2025) - a review - News 0104
Stefania Marcotti @lankylaste.bsky.social · 13/01/2026Last couple of days to apply for this! Deadline on Friday (January 16th) 000
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 06/01/202610 days remaining to apply for the next “Introduction to Image Analysis” workshop in Cardiff (deadline 16th January)! The course will take place on May 18th-20th, 2026, in collaboration with @royalmicrosoc.bsky.social. Apply now: www.rms.org.uk/rms-event-ca... #bioimageanalysisrms.org.ukIntroduction to Image Analysis 2026 021
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 05/01/2026The #CBIAS2025 poster collection is now available, along with associated DOIs for further dissemination. Take a look! crick.figshare.com/collections/...crick.figshare.comCrick BioImage Analysis Symposium 2025 PostersCBIAS features a mix of invited and selected talks, poster sessions, and panel discussions focused on current topics in image analysis and image processing for microscopy and computational microscopy.... 0106
Stefania Marcotti @lankylaste.bsky.social · 02/01/2026✨New Year's resolutions involve learning something new?✨ Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th. 🔗⬇️ www.rms.org.uk/rms-event-ca... @royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.socialrms.org.ukIntroduction to Image Analysis 2026 0106
Reposted by Stefania MarcottiFlorian Jug @florianjug.bsky.social · 28/12/2025🚨 Alarm!!! 🚨 AI/ML course for microscopy image analysis!!! 🧐 In 2026 at Janelia (@hhmijanelia.bsky.social), no tuition, housing and meals provided! Isn’t that borderline unbelievable?!? 20 students, ~14 TAs and lecturers 🗓️ June 4-18 2026 ✍️ Jan 15 2026 ✍️ 🔁 pls!! www.janelia.org/you-janelia/...janelia.orgDeep Learning for Microscopy Image AnalysisTopics The following will be covered extensively during lectures, exercises, and project work: Image denoising and restoration (fully supervised and self-supervised) Image translation (e.g., 07962
Reposted by Stefania MarcottiRoyal Microscopical Society @royalmicrosoc.bsky.social · 22/12/2025*APPLY NOW* for Introduction to Image Analysis 2026! 😃🔬 Great workshop designed to empower researchers with the necessary skills and tools to confidently analyse their data. Apply by Fri, 16 Jan: ow.ly/hHRi50XNaG4 074
Reposted by Stefania Marcottieurobioimaging.bsky.social @eurobioimaging.bsky.social · 22/12/2025✨ We are recruiting the next cohort of #EuroBioImaging Scientific Ambassadors! If you are passionate about open science & imaging and want to enhance your network or learn new skills, please apply! 🗓️ Deadline: Jan 30 www.eurobioimaging.eu/scientific-a... 021
Reposted by Stefania MarcottiAssaf Zaritsky @assafzaritsky.bsky.social · 19/12/2025🚨 New @biorxivpreprint! 🧬💻 Can the spatial architecture of chromatin predict chemoresponse? We integrated FLIM imaging + ML to show that spatially organized "open" chromatin states in pre-treatment biopsies predict resistance in TNBC. www.biorxiv.org/content/10.6... 🧵 1/3 142
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 18/12/2025Less than a month to go before applications close for the Introduction to Image Analysis workshop in Cardiff (deadline 16th January)! @royalmicrosoc.bsky.social www.rms.org.uk/rms-event-ca... 0117
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 12/12/2025We have a ✨new website✨ - go and take a look to meet our team, find out how you can work with us, and see our upcoming training events! www.crick.ac.uk/research/pla...crick.ac.ukImage AnalysisThe golden rule of image analysis is “garbage in, garbage out”, so we strongly encourage researchers to come and talk to us about their experimental plans before acquiring data. 044
Reposted by Stefania Marcottieurobioimaging.bsky.social @eurobioimaging.bsky.social · 12/12/2025🙌 The Image Data Community Days are back! Join us for 5 online days packed with lectures, hands-on workshops & networking sessions from 🗓️ April 13-17. ✅ Mark your calendars ✅ Fill in our “Collection of Interest” form Learn more 🔽 www.eurobioimaging.eu/our-events/i... 034
Stefania Marcotti @lankylaste.bsky.social · 02/12/2025Very excited about the journey ahead! Especially knowing that the aforementioned enthusiastic group of fellow organisers will be by my side (including @david-j-barry.bsky.social - I have some pretty big shoes to fill!) 1171
Stefania Marcotti @lankylaste.bsky.social · 01/12/2025Get your #bioimageanalysis journey started with this workshop! 📍Cardiff, UK 🗓️18-20/05/2026 051
Reposted by Stefania MarcottiMarie Held @makaefer.bsky.social · 27/11/2025And that’s a wrap for the @cbias.bsky.social napari workshop as well. Two days of learning, working collaboratively and finished off with a presentation from each of five project groups detailing the progress they made. Organised by Rocco D’Antuono, @giuliapaci.bsky.social and yours truly 1216
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 25/11/2025@david-j-barry.bsky.social and @lankylaste.bsky.social wrapping up 041
Reposted by Stefania MarcottiDavid Gaboriau @dgaboriau.bsky.social · 24/11/2025Poster session @cbias.bsky.social With Rocco D’Antuono, @david-j-barry.bsky.social, @martinjones.bsky.social, @lankylaste.bsky.social, @dalemoulding.bsky.social, @giuliapaci.bsky.social Talking about the Train the Trainers in BioImage Analysis we did in June @royalmicrosoc.bsky.social DAIM 0143
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 24/11/2025And we’re off. #CBIAS2025 6th Edition, first outside of the Crick but impressed by the localities at @wellcomecollection.bsky.social @david-j-barry.bsky.social welcoming the community 1163
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 18/11/2025Less than a week to go for #CBIAS2025! A few hours left to register, in person in London or online over Zoom (registration deadline on Nov 20th) Find out all the information at the link below: www.crick.ac.uk/whats-on/cri...crick.ac.ukCrick BioImage Analysis Symposium 2025 0159
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 12/11/2025Last chance to register for #CBIAS2025, registrations are closing on November 20th - join us to discuss all things #bioimageanalysis and don’t miss a great networking opportunity! Will you be there? www.crick.ac.uk/whats-on/cri...crick.ac.ukCrick BioImage Analysis Symposium 2025 041
Reposted by Stefania MarcottiBeth Cimini 🔬💻📊 @bethcimini.bsky.social · 13/11/2025Just 4 days until the start of I2K and its 33 totally free image analysis tutorials and events! Please share with your "home networks", especially early career researchers - the videos will be amazing and high-impact no matter how many people attend live, BUT (1/x) 15348
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 07/11/2025Another week, another training course! We focused on #Python today, with our internal introductory workshop to image analysis. Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏 041
Stefania Marcotti @lankylaste.bsky.social · 29/10/2025Very proud of the students for progressing very quickly over the course of the workshop! 🔬💻 And grateful to be working with an amazing team 🙏✨ @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, Sara and Cameron 0111
Reposted by Stefania MarcottiCrick Image Analysis Team @crick-ia-team.bsky.social · 27/10/2025All set up and ready to go for our 2-day Introduction to Image Analysis workshop for external attendees at @crick.ac.uk! With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand 0154
Reposted by Stefania MarcottiDave Barry @david-j-barry.bsky.social · 21/10/2025🇬🇧 Are you based in the UK? 💻 Do you spend a significant amount of time working on #BioImageAnalysis? 🧑🤝🧑 Want to spend time supporting external users? The UK BioImage Analysis Network (UK-BIAS) might be for you. Apply below before November 5th. forms.gle/XhP15nxg2ZgW...forms.gleExpression of Interest: UK Bioimage Analysis Network (UK-BIAS)The UK node of Euro-BioImaging, a major European initiative providing open access to biological and biomedical imaging technologies, currently offers assistance with Biological Image Data Analysis. Ho... 095
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 24/10/2025A month to go! Will you be at #CBIAS2025? The program is almost ready, and we look forward to welcoming you in London to discuss all things #BioImageAnalysis, from tool development, to biomedical applications and community building. Register now! 🔗⬇️ www.crick.ac.uk/whats-on/cri...crick.ac.ukCrick BioImage Analysis Symposium 2025 043
Stefania Marcotti @lankylaste.bsky.social · 23/10/2025...and it’s on the official Fiji/ImageJ documentation! 🥹 080
Reposted by Stefania MarcottiBeth Cimini 🔬💻📊 @bethcimini.bsky.social · 23/09/2025Halfway to I2K is BACK, friends of all kinds! Last year, 650 people attended 30+ TOTALLY FREE image analysis workshops of all kinds, across many timezones. If you make image analysis software and want to teach it, workshop submissions are open now! We'd love to have your tool highlighted. 15133
Reposted by Stefania MarcottiDave Barry @david-j-barry.bsky.social · 23/09/2025The provisional program for The 6th Crick Bioimage Analysis Symposium (#CBIAS2025) is live! Join us at the @wellcomecollection.bsky.social in London in November for incredible talks, posters and insightful discussions. Space is limited - register now! www.crick.ac.uk/whats-on/cri... 0148
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 23/09/2025The program for the #CBIAS2025 is now live – space is limited, so register now to secure your spot! 24th-25th Nov, Wellcome Trust, London (UK) - see you there! 🔗⬇️ www.crick.ac.uk/whats-on/cri... 0107
Reposted by Stefania MarcottiDanish BioImaging @danishbioimaging.bsky.social · 22/08/2025The Danish BioImaging Infrastructure is hiring! We are looking for a highly motivated and independent Image Analysis Application Specialist with a strong bioimage analysis background and drive to collaborate in multidisciplinary environments More information candidate.hr-manager.net/ApplicationI... 084
Reposted by Stefania MarcottiDave Barry @david-j-barry.bsky.social · 29/08/2025Today we say farewell to Alicja Skórkowska, who returns to @jagiellonskiuni.bsky.social after a very productive 6 month stay with us. Alicja will be missed! However, we also welcome @lankylaste.bsky.social, who is now officially a @crick.ac.uk person! 061
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 28/08/2025Last few days to submit an abstract for #CBIAS2025 (deadline 31/08)! We invite submissions on all topics related to #bioimageanalysis, from new software tools to discoveries made using existing methods. Early career researchers are especially encouraged to submit! www.crick.ac.uk/whats-on/cri... 043
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 27/08/2025Last but not least for our #CBIAS2025 guest speaker line-up is Ilaria Testa, fellow at @scilifelab.se. Ilaria and team develop and apply novel super resolution microscopy approaches to understand fundamental biological processes relevant for health and disease 🔗👇 www.scilifelab.se/researchers/... 064
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 26/08/2025We continue the #CBIAS2025 speaker intros with @jytinevez.bsky.social, research engineer and core facility manager at the Institut Pasteur. Jean-Yves is one of the minds behind TrackMate and is part of F-BIAS, a federation of bioimage analysts across France 🔗👇 research.pasteur.fr/fr/member/je... 0126
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 25/08/2025Next guest speaker at #CBIAS2025 is Christa Walther, community manager for @globias.bsky.social. GloBIAS is a worldwide association that brings together all those interested in #bioimageanalysis, offering opportunities for knowledge exchange, events, training, and resources. 🔗👇 www.globias.orgglobias.orgHomeNews Next BIA seminar series: "Behind the Scenes at SciLifeLab BIIF: Lessons from Managing a National Bioimage Analysis Support Unit" by Anna Klemm on 27th of August, 2pm CEST GloBIAS held its inaugu... 0134
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 24/08/2025At #CBIAS2025 we will also hear from Ewa Paluch from @cam.ac.uk. Ewa and their team take an interdisciplinary approach combining biology, imaging, mechanical testing and physical modelling to investigate the basic principles underlying animal cell morphogenesis 🔗👇 www.pdn.cam.ac.uk/directory/ew...pdn.cam.ac.ukProfessor Ewa K Paluch | Department of Physiology, Development and Neuroscience 064
Reposted by Stefania MarcottiVirginie Uhlmann @virginieuhlmann.bsky.social · 25/08/2025Once is an exception, twice is a trend, thrice is a tradition! Save the date for our now-traditional annual OME-NGFF extravaganza in Zurich! Whether you’ve just heard about OME-NGFF and are curious to learn more or if you are working with it every day, there is something for everyone this year! 03422
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 23/08/2025We continue the #CBIAS2025 speaker line-up with Dominik Kutra, senior research software engineer in the @ilastik-team.bsky.social. Dominik is one of the core developers of Ilastik, a user-friendly software that leverages machine learning algorithms to easily analyse bioimages 🔗👇 www.ilastik.orgilastik.orgilastik - ilastik 0113
Reposted by Stefania MarcottiCrick BioImage Analysis Symposium @cbias.bsky.social · 22/08/2025Next up at #CBIAS2025 is @helenajambor.bsky.social from the University of Applied Sciences of the Grisons. Helena researches data visualisation in the life sciences, combining their expertise with large datasets and their interest in data communication 🔗👇 helenajamborwrites.netlify.app/abouthelenajamborwrites.netlify.appHelenaJamborWrites - About 075