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New York Genome Center

@nygenome.org
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An independent, nonprofit academic research institution at the forefront of transforming biomedical research to advance genomic science and precision medicine.

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Nicolas Robine 🇪🇺🇫🇷🇺🇸 @nicorobine.bsky.social · 28/09/2026
Cool meeting organized by @regenseq.bsky.social on Oct 13 at @nygenome.org on "Repurposed Sequencers, New Experimental Possibilities" regenseq.github.io/meeting
Flyer of the Regenseq user group meeting organized on Oct 13 2026
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Silas Maniatis @manimota.bsky.social · 28/09/2026
In 2022 we published an open-source hardware, software, and protocols ecosystem for repurposing sequencers as automated fluidics coupled imaging instruments. On Oct 13 @yougotkunal.bsky.social & @nygenome.org will host a workshop on current applications. Register here: regenseq.github.io/meeting/
regenseq.github.io
RegenSeq Community Meeting 2026
Bringing together the RegenSeq community across multiplexed imaging, spatial transcriptomics, and optical pooled screening.
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 04/09/2026
Welcome to IICD, James Lee! 🎉 A @apammsecu.bsky.social student in the Vicković Lab at the @nygenome.org, James develops genetic perturbation approaches for intact tissue to study how cellular neighborhoods influence perturbation effects in diseases including cancer.
New member, James LeeNew member. James Lee
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 08/09/2026
What can two twentieth-century mathematicians teach us about collaboration in modern cancer research? Simon Tavaré revisits the wonderfully unconventional Hardy-Littlewood Axioms—and asks what they can still teach us today. Read here: cancerdynamics.columbia.edu/news/how-col...
Headshot of Simon Tavaré
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New York Genome Center @nygenome.org · 01/09/2026
Congratulations to New York Genome Center Core Faculty Member, @landau.bsky.social on this wonderful achievement! We are thrilled to celebrate this well-deserved recognition and his continued contributions to advancing cancer research and genomics.
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Waggoner Lab @labwaggoner.bsky.social · 27/08/2026
Splenic extramedullary hematopoiesis in myelofibrosis is shaped by transcriptomic and epigenetic dysregulation @cp-cellstemcell.bsky.social www.cell.com/cell-stem-ce... @nyulangone.bsky.social @nygenome.org
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New York Genome Center @nygenome.org · 24/08/2026
Congratulations to our Core Faculty Member @landau.bsky.social Full story: www.nygenome.org/news-events/... lnkd.in/p/g8UX_CfM
lnkd.in
Dr. Dan-Avi Landau, a world-renowned cancer researcher and pioneering geneticist, has been appointed inaugural chair of the newly created Department of Systems and Computational Biomedicine. The new…...
Dr. Dan-Avi Landau, a world-renowned cancer researcher and pioneering geneticist, has been appointed inaugural chair of the newly created Department of Systems and Computational Biomedicine. The new ...
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New York Genome Center @nygenome.org · 20/08/2026
Last week, we celebrated the conclusion of our 2026 MacMillan Summer Internship Program! 🧬 Congratulations to our talented interns, and thank you to the mentors, faculty, and staff who supported them throughout their summer at NYGC. 🎓🔬
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 13/08/2026
cc: @nygenome.org @columbiaseas.bsky.social
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 10/08/2026
🎉 Welcome to IICD, Dr. Charles Haggerty! Chuck joins the Vicković Lab at @nygenome.org as a Postdoctoral Research Scientist. His research focuses on developing spatial genomics technologies to advance our understanding of cancer biology and tumor evolution.
Headshot of Charles HaggertyCharles Haggerty details including position, education, and research
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 07/08/2026
Congratulations to @soobeomlee.bsky.social, Research Scientist at @nygenome.org (Vicković group) who received a @macmillan-csncg.bsky.social fellowship. The fellowship supports research in cancer biology and non-coding genomics. Read More> cancerdynamics.columbia.edu/news/soobeom...
Soobeom Lee
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New York Genome Center @nygenome.org · 05/08/2026
We're proud to share this important work, with contributions from NYGC scientists, Nicolas Robine, William Hooper, Tim Chu, and Jennifer Shelton. This transformative resource will help advance cancer research and accelerate scientific discovery @nicorobine.bsky.social x.com/CSHL/status/...
x.com
Cold Spring Harbor Laboratory (@CSHL) on X
The next generation of cancer research models has arrived. An international consortium led by CSHL and @NorthwellHealth has developed more than 150 organoid models representing actual patient tumors s...
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New York Genome Center @nygenome.org · 04/08/2026
Today in @cellcellpress.bsky.social Dr. Hemali Phatnani and collaborators show different forms of cognitive impairment in ALS arise from biological processes, providing a new framework for understanding the disease and developing more precise therapies. Read more: www.nygenome.org/news-events/...
nygenome.org
New Study Reveals Distinct Biological Drivers of Cognitive Impairment in ALS - August 4, 2026
Read about New Study Reveals Distinct Biological Drivers of Cognitive Impairment in ALS at the New York Genome Center on August 4, 2026
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New York Genome Center @nygenome.org · 04/08/2026
Exciting to see this NIH-funded research highlighted by NIH Director Jay Bhattacharya, MD, PhD Congratulations to Bing Ren and collaborators on this important discovery—a major step forward in understanding how brain aging may contribute to neurodegenerative disease. x.com/NIHDirector_...
x.com
Jay Bhattacharya, MD, PhD (@NIHDirector_Jay) on X
🧠New NIH-funded research has uncovered an aspect of human brain aging that reshapes our approach to age-related cognitive decline and dementia risk. This knowledge will be critical as we work toward ...
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New York Genome Center @nygenome.org · 27/07/2026
A new @science.org study co-led by NYGC CEO & Scientific Director Dr. Bing Ren provides the first comprehensive single-cell map of gene regulation in failing human hearts, revealing new therapeutic targets for heart failure. Read more: www.nygenome.org/news-events/...
nygenome.org
Gene Regulation Map Reveals Treatment Targets for Heart Failure - July 27, 2026
Read about Gene Regulation Map Reveals Treatment Targets for Heart Failure at the New York Genome Center on July 27, 2026
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New York Genome Center @nygenome.org · 23/07/2026
A new study published in @science.org by NYGC researchers and collaborators maps how the human hippocampus changes with age using state-of-the-art single-cell genomics. Read more: www.nygenome.org/news-events/...
nygenome.org
New Study Revises Understanding of Brain Immune Cells During Human Aging - July 23, 2026
Read about New Study Revises Understanding of Brain Immune Cells During Human Aging at the New York Genome Center on July 23, 2026
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 20/07/2026
Welcome to IICD, Dr. Alba Corman! A Postdoctoral Research Scientist in the Vicković Lab at @nygenome.org, her research develops next-generation controllable CRISPR screening technologies that combine single-cell multiomics and high-content imaging to identify therapeutic targets for diseases.
Alba CormanAlba Corman: Position, Education, & Research details
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New York Genome Center @nygenome.org · 17/07/2026
Nothing brings people together like the World Cup! ⚽️ Thanks to NYGC’s HR Team and Employee Engagement Group for organizing a fun social hour filled with soccer, snacks, and great company!
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New York Genome Center @nygenome.org · 15/07/2026
Last week, NYGC hosted the 2026 MacMillan Center Annual Meeting, bringing together researchers to share the latest advances in cancer genomics, single-cell technologies, epigenetics, comp bio, and AI. The meeting concluded with a keynote from Christina Leslie, PhD @mskcancercenter.bsky.social
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New York Genome Center @nygenome.org · 13/07/2026
A new study using laboratory technology reveals the inner workings of how a type of brain tumor progresses toward greater malignancy. NYGC Core Faculty @landau.bsky.social led this research with colleagues at Harvard Medical School and Mass General Brigham. Article: www.nygenome.org/news-events/...
nygenome.org
Cancer Evolution Study Reveals Biology of Glioma Progression - July 10, 2026
Read about Cancer Evolution Study Reveals Biology of Glioma Progression at the New York Genome Center on July 10, 2026
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New York Genome Center @nygenome.org · 06/07/2026
Please join us in welcoming our 2026 summer interns! Program highlights include mentorship, lab tours, scientific seminars, career development workshops, a poster session and much more!
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 02/07/2026
Exploring the future of genomics 🧬 IICD's SRP and Alliance interns toured @nygenome.org, learning about cutting-edge sequencing technologies, biomedical research, and the innovations shaping precision medicine. An inspiring day of discovery and scientific exploration. #STEM #Genomics #Research
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New York Genome Center @nygenome.org · 01/07/2026
Congratulations to NYGC Core Faculty Member, Sanja Vicković, PhD on receiving an NIH R01 grant from the National Human Genome Research Institute to develop a cost-accessible platform for spatial multi-omic profiling Read more: www.nygenome.org/news-events/...
nygenome.org
New York Genome Center aims to lower barriers to spatial multi-omics with NIH funding - July 1, 2026
Read about New York Genome Center aims to lower barriers to spatial multi-omics with NIH funding at the New York Genome Center on July 1, 2026
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David A Knowles @davidaknowles.bsky.social · 23/06/2026
Reminder that the #MLCB2026 paper/abstract deadline is July 1st! Conf is Nov 16-17 @nygenome.org. Fantastic lineup of keynote speakers @drannecarpenter.bsky.social (Broad/Purdue), Ellen Zhong (Princeton), Christina Leslie (MSKCC) & Michael Brenner (Harvard). More deets at mlcb.org. Please RP!
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New York Genome Center @nygenome.org · 22/06/2026
Congratulations to NYGC's Saurav Guha, PhD, FACMG, Director of Molecular Diagnostics, on leading the new @theacmg.bsky.social Guideline on Repeat Expansion detection from NGS. Read more here: https//www.gimjour...
gimjournal.org
Detection of repeat expansion variants using next generation sequencing: A points to consider statement of the American College of Medical Genetics and Genomics (ACMG)
Short tandem repeats (STRs) are a common type of genetic variation within the human genome and are defined as DNA segments composed of tandemly repeated nucleotide motifs that are usually 2-6 base pai...
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CNAG @cnag-eu.bsky.social · 16/06/2026
🔝 What great news! 🥇Professor @tuuliel.bsky.social (@nygenome.org, @scilifelab.se) has received the prestigious European Society of Human Genetics Award Really proud of this well-deserved recognition of a member of our Scientific Advisory Board at CNAG #ESH2026 #ESHG @eshg.bsky.social
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New York Genome Center @nygenome.org · 16/06/2026
Congratulations to @landau.bsky.social, New York Genome Center Core Faculty Member, a 2026 Recipient of a Lotus Award from the Pershing Square Foundation www.nygenome.org/news-events/...
nygenome.org
New York Genome Center Core Faculty Member, Dr. Dan Landau, Receives Award for Research on New Ovarian Cancer Targets - June 16, 2026
Read about New York Genome Center Core Faculty Member, Dr. Dan Landau, Receives Award for Research on New Ovarian Cancer Targets at the New York Genome Center on June 16, 2026
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Silas Maniatis @manimota.bsky.social · 12/06/2026
Starting now: @nygenome.org ‘s Satija Lab Single Cell Genomics Day! No better annual summation of advances in single cell and spatial genomics is available, and it’s free! Don’t miss it! www.youtube.com/live/ynO1PtN...
youtube.com
Single Cell Genomics Day 2026
YouTube video by Satija Lab
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New York Genome Center @nygenome.org · 04/06/2026
Congratulations @landau.bsky.social, breakthrough technology from the lab, now live in @cellcellpress.bsky.social Instead of cutting the genome where proteins bind (e.g., Cut&Tag), D&D-seq scars the DNA with a deaminase, allowing single cell genome mapping of TFs and chromatin remodellers!
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New York Genome Center @nygenome.org · 01/06/2026
Join us for the 3rd NYC Chromatin Club Symposium on July 21! Registration is completely free, but be sure to secure your spot before the deadline this Friday, June 5th. To register, please use this link. docs.google.com/forms/d/e/1F...
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New York Genome Center @nygenome.org · 27/05/2026
@nevillesanjana.bsky.social Core Faculty Member of the New York Genome Center, explains how scalable CRISPR screens + single-cell sequencing are helping connect noncoding variants to disease biology and therapeutic targets. Read more; www.nygenome.org/news-events/...
nygenome.org
Turning GWAS signals into drug targets with scalable CRISPR - May 26, 2026
Read about Turning GWAS signals into drug targets with scalable CRISPR at the New York Genome Center on May 26, 2026
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Nicolas Robine 🇪🇺🇫🇷🇺🇸 @nicorobine.bsky.social · 05/05/2026
⚠️Preprint alert⚠️: we set up Polyethnic-1000 at @nygenome.org to study the molecular basis of cancer disparities. One striking example is endometrial cancer, with much higher mortality in patients of African ancestry.
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New York Genome Center @nygenome.org · 08/04/2026
Researchers at the New York Genome Center have developed Lancet2, a faster and more accurate computational tool for detecting complex genetic variants across the genome. Read More: www.nygenome.org/news-events/... #Genomics #ComputationalBiology #PrecisionMedicine
nygenome.org
NYGC Researchers Develop Lancet2, a Faster and More Accurate Tool for Detecting Complex Genetic Variants - April 7, 2026
Read about NYGC Researchers Develop Lancet2, a Faster and More Accurate Tool for Detecting Complex Genetic Variants at the New York Genome Center on April 7, 2026
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David A Knowles @davidaknowles.bsky.social · 02/04/2026
@nygenome.org is hiring Genomic AI Fellows! (fancy postdoc positions) If you're interested in working at the interface of AI and genomics in a great environment please apply at: jobs.silkroad.com/NYGenome/Car...
jobs.silkroad.com
NYGC Genomic AI Fellows - 101 Avenue of the Americas, 7th Floor, New York, New York - New York Genome Center
Find a career with New York Genome Center
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New York Genome Center @nygenome.org · 25/03/2026
Congratulations to @tuuliel.bsky.social PhD, Senior Associate Faculty Member at the New York Genome Center, on receiving a prestigious award from the @eshg.bsky.social! Read more about this well-deserved recognition: www.nygenome.org/news-events/...
nygenome.org
Tuuli Lappalainen, PhD Receives Prestigious European Society of Human Genetics Award - March 25, 2026
Read about Tuuli Lappalainen, PhD Receives Prestigious European Society of Human Genetics Award at the New York Genome Center on March 25, 2026
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 11/03/2026
Envision the future of #SpatialTranscriptomics and #DigitalPathology tools in a new article spotlighting IICD Core Member Sanja Vicković and her lab> bit.ly/40o5jOA #CancerResearch #BiomedicalEngineering #Multiomics #ColorectalCancer
Dr. Sanja Vickovic in front of imaging technology.
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markgerstein.bsky.social @markgerstein.bsky.social · 08/03/2026
Posting my talk tomorrow @nygenome.org (hosted by @gamzeandgursoy.bsky.social). lectures.gersteinlab.org/summary/AI-A... Doing genomics with AI & then seeing if AI can take over the whole thing (spoiler: not yet!). New slides on assessing agent models with externalized reasoning (vs. baselines)
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The Mark Foundation for Cancer Research @themarkfdn.bsky.social · 03/02/2026
@landau.bsky.social @rdrapkin8-penn.bsky.social Paul Mischel, and Adam Widman are searching for pre-cancerous signals of ovarian cancer in the blood, laying the foundation for non-invasive screening test. 🩸@tinaswish.bsky.social @weillcornell.bsky.social @mskcancercenter.bsky.social
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Silas Maniatis @manimota.bsky.social · 13/01/2026
TDP43 dysfunction in ALS leads to transposon mayhem in the transcriptome. Nice work from @nygenome.org ‘s ALS consortium, lead by Hemali Phatnani, and @nyulangone.bsky.social ‘s @karthiknatarajan.bsky.social & @mollygale.bsky.social. Nice work guys! www.biorxiv.org/content/10.6...
biorxiv.org
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Molly Gale (Gale-Hammell Lab) @mollygale.bsky.social · 10/01/2026
📣Excited to announce a new pre-print from the lab 📣 Led by my student @storiesofisobel.bsky.social in collab with Hemali Phatnani @nygenome.org We discovered a novel class of TDP-43 dependent cryptic gene-TE spliced transcripts: crypTEs #TEsky #RNAsky #ALS doi.org/10.64898/2026.01.09.698641
doi.org
TDP-43 dysfunction leads to the accumulation of cryptic transposable element-derived exons, crypTEs, in iPSC derived neurons and ALS/FTD patient tissues
TDP-43 is an RNA and DNA binding protein that plays major roles in regulating RNA processing. In particular, TDP-43 dysfunction leads to the accumulation of cryptic splice isoforms that result from im...
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Elizabeth McKenna @elizsmckenna.bsky.social · 07/01/2026
Now online in Cancer Discovery @aacrjournals.bsky.social: Genotype-to-Phenotype Mapping of Somatic Clonal Mosaicism via Single-Cell Co-Capture of DNA Mutations & mRNA Transcripts by @dennisjyuan.bsky.social, @landau.bsky.social, et al. doi.org/10.1158/2159... @nygenome.org @weillcornell.bsky.social
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Waggoner Lab @labwaggoner.bsky.social · 06/01/2026
A comprehensive spatial splicing analysis in the brain under normal and neoplastic conditions @natbiotech.nature.com @raulrabadan.bsky.social @columbiauniversity.bsky.social @davidaknowles.bsky.social @nygenome.org www.nature.com/articles/s41...
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New York Genome Center @nygenome.org · 14/11/2025
Congratulations to NYGC Core Faculty Members, @nevillesanjana.bsky.social and Rahul Satija for their feature on the @clarivate.com #highlycited2025 list! Learn more here: www.nygenome.org/news-events/...
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 12/11/2025
Don't forget to watch our new Faces of IICD Video Series featuring Beatrice Grauman, a PhD student in the Vicković Lab @nygenome.org. ⤵️
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 03/11/2025
The November newsletter is out now. Don’t miss our alumni spotlight, cutting-edge research on colon aging, a new K-12 partnership, and other exciting updates: cancerdynamics.columbia.edu/news/iicd-ne... cc: @nygenome.org @brentstockwell.bsky.social

IICD Newsletter November 2025
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Nature Biotechnology @natbiotech.nature.com · 22/10/2025
Tissue and cellular spatiotemporal dynamics in colon aging - @nygenome.org @flatironinstitute.org @broadinstitute.org @cancerdynamics.bsky.social go.nature.com/47I1RBF
go.nature.com
Tissue and cellular spatiotemporal dynamics in colon aging - Nature Biotechnology
cSplotch compares spatial transcriptomics data across ages and regions of mouse colon tissue.
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Neville Sanjana @nevillesanjana.bsky.social · 14/10/2025
Congrats to our lab's recent MD-PhD grad Rachel Yan ( @rachelyan.bsky.social) on the beautiful cover art accompanying her MultiPerturb-seq study!
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NY-CURES @nycures.bsky.social · 08/10/2025
From patient to scientist: Sergei German beat cancer thanks to clinical trials, inspiring him to leave his career in finance and drive research @nygenome.org A NY statewide biomedical institute will make more incredible stories like his possible. Help make this happen, sign up at www.nycures.org/
nycures.org
New York Cures – NY-CURESNew York Cures Website
NY-CURES is working to advance bold, state-backed investment in biomedical research—on the scale of successful initiatives in California and Texas—to grow New York’s leadership in science, innovation, and health.
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Irving Institute for Cancer Dynamics @cancerdynamics.bsky.social · 15/09/2025
Meet Beatrice Grauman, PhD student in the Vicković Lab at @nygenome.org 🌟. Her research explores tumor–microenvironment interactions and cancer evolution. 🎥Find out what inspires her outside the lab in our latest Faces of IICD feature 🔗 bit.ly/3K0Xidr #FacesOfIICD #PhDLife #WomenInSTEM
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Alex @alexpellancheng.bsky.social · 14/08/2025
Massive team effort. A huge thank you to the Ultima Genomics team, our clinical collaborators and sequencing team @nygenome.org Look at the author list, it's huge! Takes a village. Super proud of trainees Aaron, Sam and Sri
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