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Broad Institute

@broadinstitute.org
5.6K followers 350 following 132 posts

A multidisciplinary community of researchers with the mission to better understand the roots of disease and narrow the gap between new biological insights and impact for patients. Broadinstitute.org

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Broad Institute @broadinstitute.org · 5h
New method allows scientists to connect disease-linked regulatory genetic variants to the genes they control. These variants are more likely to influence disease risk if they alter chromatin accessibility that then changes gene expression.
broad.io
Atlas of immune cells explains how genetic variants cause disease
A new method reveals which genetic variants are most important in disease and how cells “buffer” the expression of genes critical for health.
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Reposted by Broad Institute
Masahiro Kanai @masakanai.bsky.social · 6h
Our single-nucleus immune multiome atlas is now out in @nature.com! 🧬 10M PBMCs from 1,108 @finngen.bsky.social donors recruited by Finnish Blood Service, profiled at @broadinstitute.org with chromatin accessibility and gene expression in the same nuclei, to trace how disease variants act 🧵👇
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Broad Institute @broadinstitute.org · 8h
The @novo-nordisk.bsky.social is renewing its commitment to Broad with a $53M investment. With Danish scientists, the Center will leverage massive-scale data, AI, and cellular models to decode the genetic drivers of type 2 diabetes and obesity. broad.io/NNFCRenewal
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Broad Institute @broadinstitute.org · 16/09/2026
To aid in virus outbreak responses, Broad researchers from @sabetilab.bsky.social and @fathom.info created Delphy.bio, a free web tool to reconstruct how a virus is spreading and changing using viral genomic data, reducing a months-long task into one that takes hours.
broadinstitute.org
Software rapidly tracks viral variants with high accuracy
A new web-based program called Delphy assembles viral family trees at unprecedented speed to aid outbreak responses.
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Broad Institute @broadinstitute.org · 02/09/2026
New method lets scientists watch gene activity unfold in living cells over time, by engineering cells to package their own RNA into virus-like particles they release, ready for researchers to collect and sequence.
broad.io
New method allows scientists to follow gene activity over time in the same cells
In the new method, cells package and export their RNA, enabling researchers to sequence and analyze the RNA without killing the cells.
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thexavierlab.bsky.social @thexavierlab.bsky.social · 27/08/2026
New preprint from our collaboration with Caroline Uhler and @broadinstitute.org on TissueFormer, a new tool for predicting spatial gene expression from histology images at cellular resolution www.biorxiv.org/content/10.6...
biorxiv.org
Multi-Modal Foundation Model with Whole-Slide Attention Enables Transferrable Digital Pathology at Single-Cell Resolution
Paired histopathology and spatial transcriptomics data are advancing our understanding of tissue biology and disease, but modeling both modalities at single-cell resolution while mapping local and dis...
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Reposted by Broad Institute
Beth Cimini 🔬💻📊 @bethcimini.bsky.social · 26/06/2026
A week-overdue 🧵on the newest paper from the Cimini lab- do you ever do spatial transcriptomics? If you do, and you want free extra phenotypic info, step in to learn more about "Evaluating integrative strategies for incorporating phenotypic features in spatial transcriptomics". 🧪 (1/x)
onlinelibrary.wiley.com
Evaluating integrative strategies for incorporating phenotypic features in spatial transcriptomics
Spatial transcriptomics (ST) encompass technologies that measure gene expression in tissue samples without disrupting their organisation, unlike other single-cell techniques. In imaging-based ST spec...
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Broad Institute @broadinstitute.org · 12/08/2026
Nominations are now open for the 2027 Merkin Prize in Biomedical Technology! 🏆 This international $400,000 prize recognizes pathbreaking technologies that have improved human health through treatment, diagnosis, or prevention of disease. Learn more: merkinprize.org
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Nature Biotechnology @natbiotech.nature.com · 12/08/2026
Mechanistic machine learning for prediction of prime editing outcomes - @broadinstitute.org @hhmi-science.bsky.social www.nature.com/articles/s41...
nature.com
Mechanistic machine learning for prediction of prime editing outcomes - Nature Biotechnology
OptiPrime incorporates prime-editing biochemistry to predict prime-editing outcomes.
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Broad Institute @broadinstitute.org · 12/08/2026
OptiPrime, a new AI model from David Liu's lab, helps scientists choose the best pegRNAs to make a desired edit, avoiding slow and costly steps in the lab and streamlining development of gene-editing medicines for rare diseases.
broad.io
AI model streamlines prime editing
The tool, called OptiPrime, helps researchers more easily determine the best guide RNAs for efficient prime editing, avoiding costly, time-consuming steps in the lab.
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Broad Institute @broadinstitute.org · 05/08/2026
The Cancer Dependency Map now includes data from dozens of 3D cancer models across 10 cancer types, revealing new dependencies and offering a more comprehensive resource for cancer research.
broad.io
Cancer Dependency Map now includes next-generation 3D cancer models
Broad scientists expand the DepMap by adding cancer organoids and demonstrate the models’ potential to fuel new discoveries.
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Broad Institute @broadinstitute.org · 04/08/2026
This Thursday, August 6, at 6PM ET, join us in Cambridge, MA (or online) for a Broad Discovery Series talk with @jbuenrostro.bsky.social: Uncovering Adversity's "Molecular Scars." Register: broadinstitute.swoogo.com/bds2026
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Nature Biotechnology @natbiotech.nature.com · 03/08/2026
Evolution of botulinum neurotoxin serotype X proteases to induce inflammatory cell death in cancer cells - @broadinstitute.org @hhmi-science.bsky.social www.nature.com/articles/s41...
nature.com
Evolution of botulinum neurotoxin serotype X proteases to induce inflammatory cell death in cancer cells - Nature Biotechnology
Directed evolution of proteases induces targeted, multipathway lytic cell death in cancer cells.
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thexavierlab.bsky.social @thexavierlab.bsky.social · 04/08/2026
New work with Ben Medoff's lab, online now! ADAMTS14 regulates YAP-driven fibroblast activation in IPF. We define an ADAMTS14–collagen V–focal adhesion pathway that contributes to $fibrosis, highlighting ADAMTS14 as a potential therapeutic target. doi.org/10.1093/ajrc...
doi.org
ADAMTS14 is a Novel Modulator of Fibroblast Mechanoactivation in Pulmonary Fibrosis
AbstractRationale. Yes-associated protein (YAP)-mediated fibroblast mechanoactivation is an important driver of fibrosis in idiopathic pulmonary fibrosis (
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Broad Institute @broadinstitute.org · 21/07/2026
We're thrilled to announce the Center for Therapeutic Genetics (CTG) — a new collaboration between Broad, Boston Children’s Hospital, and Jackson Laboratory to develop genetic medicines for rare and ultra-rare diseases. (1/3)
broad.io
Broad Institute, Boston Children’s Hospital, and The Jackson Laboratory launch the Center for Therapeutic Genetics, a non-profit effort to develop genetic medicines for rare and ultra-rare diseases
The new collaboration aims to develop precision medicines, including base and prime editing, to treat patients with rare diseases, using infrastructure and repeatable practices the center will share w...
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Jason Buenrostro @jbuenrostro.bsky.social · 18/07/2026
Thank you Broad Institute of MIT and Harvard for this profile. The last 2 years have been an extraordinary moment of creativity and inspiration. If you’re interested in joining us, PM me! We’re building new methods, models and ML tools - we’re recruiting at all levels!
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Broad Institute @broadinstitute.org · 16/07/2026
Shaped by a tumultuous childhood, Broad researcher and epigenomic tool-maker @jbuenrostro.bsky.social pivots to studying the biology of stress and adversity and finding new ways to boost resilience.
broad.io
A bioengineer shifts his career to explore how life experiences change the body
Shaped by a tumultuous childhood, Jason Buenrostro pivots from technology development to studying the biology of stress and adversity and finding new ways to boost resilience.
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Broad Institute @broadinstitute.org · 10/07/2026
Join us on Thursday, August 6, at 6PM ET in Cambridge, MA (or online) for a Broad Discovery Series talk with @jbuenrostro.bsky.social: Uncovering Adversity's "Molecular Scars." Register: broadinstitute.swoogo.com/bds2026
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The Jackson Laboratory @jax.org · 09/07/2026
We're thrilled to announce that, along with @broadinstitute.org, @bostonchildrens.bsky.social, RARE Hope and partners, JAX was selected for ARPA-H THRIVE Award to advance gene editing platform for pediatric epilepsies and rare CNS diseases. 🧪🧬🧠
jax.org
The Jackson Laboratory, with the Broad Institute and partners, selected for ARPA-H THRIVE Award to advance gene editing platform for pediatric epilepsies and rare CNS diseases
Pediatric Epilepsies & Rare CNS Gene Editing Platform (PERC) accelerates the development of precision genetic medicines for severe childhood neurologic disease.
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Broad Institute @broadinstitute.org · 09/07/2026
We're thrilled to announce that a Broad-led consortium of 12 organizations has been selected to receive funding from @arpa-h.bsky.social under its THRIVE program to launch the Pediatric Epilepsies and Rare CNS (PERC) Gene Editing Platform. broad.io/ARPA-H (1/5)
broad.io
Broad-led consortium receives ARPA-H award to advance gene editing for rare pediatric epilepsy
Twelve organizations spanning gene editing science, clinical medicine, manufacturing, regulatory strategy, and patient advocacy aim to deliver first-in-human trial within three years. div.hero-section...
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Alicia Martin @genetisaur.bsky.social · 08/07/2026
So excited to see this published! This method was a long time in the making and is now being widely used to balance scale with depth, especially for participants where unbiased sequencing approaches are so much more useful than arrays
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Broad Institute @broadinstitute.org · 08/07/2026
Broad scientists developed the Blended Genome Exome (BGE) sequencing method, which delivers high-quality, unbiased data at a lower cost than existing gold-standard methods and makes large-scale genetic studies more feasible. @genetisaur.bsky.social
broad.io
Low-cost genome sequencing approach is powering genetics research on mental illness and many other studies
The Blended Genome Exome approach delivers high-quality, unbiased genetic data at a quarter of the cost of the leading sequencing method.
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Microsoft Research @msftresearch.bsky.social · 09/06/2026
New research in Nature Methods from Project Ex Vivo shows AI models learn more from diverse cell states than from scaled datasets alone, a finding that could reshape how therapies are matched to patients. msft.it/6013vgE8l
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Broad Institute @broadinstitute.org · 15/06/2026
The 2026 Richard N. Merkin Prize in Biomedical Technology honors Graeme Clark, Erwin Hochmair, Ingeborg Hochmair, Michael Merzenich, and Blake Wilson for developing the modern cochlear implant — a device used by more than 1 million people worldwide.
broad.io
2026 Merkin Prize in Biomedical Technology awarded to pioneers of the modern cochlear implant
The $400,000 prize honors five researchers who developed the first medical device to generate a human sense through a direct neural interface, a groundbreaking tool used by more than one million peopl...
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Broad Institute @broadinstitute.org · 15/06/2026
In three new studies, the David Liu lab has optimized key prime editing components (guide pegRNA motifs, reverse transcriptase stability, and delivery via lipid nanoparticles), addressing key bottlenecks that previously impeded its use in animals and human patients.
broadinstitute.org
Scientists improve nearly every aspect of prime editing, moving it closer to treating more genetic diseases
The advances in editing efficiency and delivery are important steps toward in vivo therapeutic prime editing.
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Huntington's Disease Foundation @hdfcures.bsky.social · 11/06/2026
Won-Seok Lee @broadinstitute.org, receives the 2026 Nancy S. Wexler Young Investigator Prize, which is awarded annually to an early career researcher whose work reflects the highest caliber of excellence, diligence & creative thinking. Learn more: tinyurl.com/nswprize #curehd #huntingtonsdisease
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Dana-Farber News @danafarbernews.bsky.social · 27/05/2026
New research in @natmed.nature.com by @danafarber.bsky.social’s Dr. Suzanne George and Dr. Bradley Bernstein reveals the clinical activity of FGFR inhibition in SDH-deficient GIST. ➡️bit.ly/497QeW8 @broadinstitute.org
Research news from Dana-Farber Cancer Institute
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Elinor Karlsson @elinork.bsky.social · 14/05/2026
My May 20 (next Wednesday!) lecture at Broad: Turns out humans don't have all the answers. There is an untapped opportunity for innovation in medicine by exploring why other species are protected from diseases common in humans. Come and find out more!
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Broad Institute @broadinstitute.org · 06/05/2026
Join us in Cambridge, MA (or online) for a Broad Discovery Series talk, “What Animal Superpowers Can Teach Us About Our Own DNA,” on Wednesday, May 20, at 6 pm ET with @elinork.bsky.social of @darwinsark.org. Register: broadinstitute.swoogo.com/Karlsson
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gtexportal.bsky.social @gtexportal.bsky.social · 05/05/2026
NHP-dGTEx V1 derived data is available for download from @GTExPortal. NHP-dGTEx V1 contains 421 Macaque samples (372 RNA-seq and 49 WGS) from 50 subjects and 333 Marmoset samples (314 RNA-seq and 19 WGS) from 20 subjects. bit.ly/4lV8tmI
bit.ly
GTEx Portal
The Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 53 non-...
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gtexportal.bsky.social @gtexportal.bsky.social · 05/05/2026
dGTEx V1 open access data is now available for download from @GTExPortal. dGTEx V1 contains 379 samples from 40 subjects. bit.ly/4rHwa3A #rnaseq
bit.ly
GTEx Portal
The Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 53 non-...
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Broad Institute @broadinstitute.org · 04/05/2026
Broad researchers used their single-molecule tracking technology to reveal unexpected patterns of dimerization among EGFR family receptors, shedding light on their role in cancer. Learn more: broad.io/Peng-EGFR
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Tom Ulrich (he/him) @scribblertom.com · 01/05/2026
Other mammals have so many abilities that we don't, but which could teach us a lot about health and disease. Join us for what promises to be a talk filled to the brim with great science and super-cute animal pictures!
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adamjrubin.bsky.social @adamjrubin.bsky.social · 30/04/2026
Excited to share our paper out today in @science.org! We directed high-content, single-cell genetic screens to ask how a disordered adapter protein orchestrates the complex process of T cell activation. (1/4) www.science.org/doi/10.1126/...
science.org
Disordered protein LAT encodes relative levels of signaling pathways in T cell activation
The disordered adapter protein linker for activation of T cells (LAT) propagates T cell receptor signaling. To interrogate how LAT coordinates multiple downstream pathways, we developed a single-cell ...
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Broad Institute @broadinstitute.org · 27/04/2026
Have you ever wondered what animal superpowers can teach us about our own DNA? Join us in Cambridge, MA (or online) for a Broad Discovery Series talk on Wednesday, May 20 at 6 pm ET with Elinor Karlsson. Register: broadinstitute.swoogo.com/Karlsson
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Broad Institute @broadinstitute.org · 22/04/2026
A new drug candidate designed to slow the progression of prion disease is entering a phase 1 clinical trial. The trial, led by Eric Minikel, codirector of Broad’s Prion Therapeutic Science program, will evaluate a divalent small interfering RNA (siRNA) drug candidate for safety and tolerability.
broad.io
Clinical trial of a prion disease drug candidate begins enrolling participants
It’s the first time the potential treatment, a small interfering RNA targeting the prion protein, is being tested in humans.
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thexavierlab.bsky.social @thexavierlab.bsky.social · 21/04/2026
Out now in @cp-cellhostmicrobe.bsky.social! In collaboration with Swiss clinicians, we built the largest nasal microbial gene atlas in infants w/ and w/o cystic fibrosis to date (cont.)
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Broad Institute @broadinstitute.org · 15/04/2026
The Cancer Dependency Map Consortium is entering its third phase, accelerating the next generation of cancer therapies. (1/4)
broadinstitute.org
Cancer Dependency Map Consortium launches Phase 3 to accelerate next-generation therapeutics
The next stage of the academic-industrial partnership aims to expand beyond cancer vulnerabilities to investigate cancer resistance, surface targets, and high-dimensional readouts.
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broadmpg.bsky.social @broadmpg.bsky.social · 14/04/2026
The recording of "Network-based rare variant association for complex diseases" by @snz20.bsky.social is now available: youtu.be/KO-6M5lXTlI. This talk is part of @broadinstitute.org's MPG Primer series. For more info, check out broad.io/MPGPrimer.
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broadmpg.bsky.social @broadmpg.bsky.social · 14/04/2026
The recording of "Epigenomic profiling and AI-guided cancer diagnostics" by @sbenfatto.bsky.social is now available: youtu.be/eO4ywdRGDN4. This talk is part of @broadinstitute.org's MPG Primer series. For more info, check out broad.io/MPGPrimer.
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Broad Institute @broadinstitute.org · 14/04/2026
Scientists corrected a genetic mutation that causes a rare, life-threatening condition, Zellweger spectrum disorder, in mice. The study points toward an optimal base editor enzyme with implications for other genetic diseases. broad.io/ZSD-News
broad.io
Base editing repairs mutation and liver function in mouse model of Zellweger spectrum disorder
The base editing enzyme used in this study is the same one that fixed Baby KJ Muldoon’s disease-causing mutation and saved his life in 2025.
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Broad Institute @broadinstitute.org · 09/04/2026
Leukemia and possibly other cancers could be using sugary proteins on their cell surface to shield themselves from immune attack. New study points to potential cancer immunotherapy target. broad.io/CD43 @danafarbernews.bsky.social @mgbresearch.bsky.social
broad.io
Leukemia cells use a sugar-coated protein to hide from the immune system
Targeting this protein, called CD43, could offer a new path to treatment for leukemia and other cancers.
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Broad Institute @broadinstitute.org · 31/03/2026
New study shows the promise of Cell Painting, an AI-powered, scalable cell-imaging method, to make drug toxicity testing faster, cheaper, and more information-rich in human cells—potentially reducing failed clinical trials and animal testing.
broad.io
Scalable cell imaging method could help make drug safety testing faster, cheaper
Researchers show that Cell Painting, an image-based cell profiling method, can reveal details of how drug candidates and other chemicals may harm cells.
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Broad Institute @broadinstitute.org · 26/03/2026
The first ever large scale study of whole genomes from Anopheles darlingi -- a key malaria vector in the Americas -- reveals signs of emerging insecticide resistance. @jacobphd.bsky.social
broad.io
Malaria-transmitting mosquitoes in South America are evolving to evade insecticides
Sequencing of complete genomes of Anopheles darlingi mosquitoes in the Americas finds resistance may make them harder to kill.
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Cancer Grand Challenges @cancergrand.bsky.social · 25/03/2026
Team #PROSPECT has revealed how the epigenome “remembers” inflammation, priming cells for cancer risk in mice. We spoke with @snaga13.bsky.social and Jason Buenrostro about what these findings mean for patients, and what the future holds. Learn more: www.cancergrandchallenges.org/news/the-epi...
cancergrandchallenges.org
The epigenome remembers and primes for cancer risk
Team PROPSECT were funded in 2024 to take on our early-onset cancers challenge. The team is focusing on colorectal cancer, where there is an alarming rise in individuals under 50.
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Broad Institute @broadinstitute.org · 25/03/2026
Chronic gut inflammation leaves behind “molecular scars” that may raise the risk for developing cancer, according to a new study showing that epigenetic memory of colitis, along with a cancer-promoting mutation, can accelerate tumor growth in mice. @jbuenrostro.bsky.social
broad.io
How inflammation may prime the gut for cancer
A study in mice suggests that even intestinal cells that appear healthy may hold epigenetic “memories” of earlier bouts of inflammation that can promote colon cancer later in life.
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Broad Institute @broadinstitute.org · 25/03/2026
By analyzing DNA data from over 900,000 people, a new study found that some of the most common viruses hiding in the body vary with age, sex, and the seasons — and that genes influence the long-term effects these viruses have on our health.
broad.io
A new view into viruses in the body
Analysis of some of the most common viruses hiding in the body shows how our genes influence the long-term effects of these viruses on our health.
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Broad Institute @broadinstitute.org · 12/03/2026
The Stanley Family Foundation has renewed its commitment to psychiatric research at Broad Institute, bringing its total investment to more than $1 billion. This funding has advanced schizophrenia/bipolar disorder research, opening new paths to therapies. broad.io/SC-News
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Broad Institute @broadinstitute.org · 11/03/2026
Join us March 18 at 6PM ET in Cambridge, MA (or online) for a Broad Discovery Series talk with Heidi Greulich and Matthew Meyerson, “The story behind a new therapy for lung cancer patients.” Register: broadinstitute.swoogo.com/Discovery26
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UCSF Health @ucsfhealth.bsky.social · 09/03/2026
A genetic variation has a big impact on who develops aortic stenosis, UCSF/@broadinstitute.org researchers found using a deep learning-based model. “These findings demonstrate the power of jointly analyzing cardiovascular structure and function.” Dr. James Pirruccello says. ucsfh.org/4bhJ3ea
ucsfh.org
Improving Diagnosis of Aortic Stenosis with Genetics and AI - UCSF MedConnection
Joint UCSF and Broad Institute study investigates genetic basis for development of of Aortic Stenosis.
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