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Marcin J. Suskiewicz

@msuskiewicz.eurosky.social
1.9K followers 1.8K following 377 posts

Structural biologist and biochemist. CNRS researcher at CBM Orléans @cbm-upr4301.bsky.social. Interested in protein modifications & interactions. Also husband, dad of 3, friend, ☧. Personal website: msuskiewicz.github.io

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Reposted by Marcin J. Suskiewicz
Matthias Soller @matthiassoller.bsky.social · 01/10/2026
Excited to share our new paper thanks to Tom Dix, @davidmcquarrie.bsky.social @yuantian23.bsky.social and the others @mcf-uom.bsky.social @fbmh-uom.bsky.social @manchester.ac.uk about multimerization of prototype RRM ELAV/Hu family RNA binding proteins.
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Reposted by Marcin J. Suskiewicz
Greg Vert @plantubiquitin.bsky.social · 01/10/2026
Hydrophylic loop of PIN2 undergoes homotypic interaction via a conserved β-sheet motif to directly modulate clustering and dynamics www.pnas.org/doi/10.1073/...
pnas.org
A conserved β-sheet motif mediates PIN2 hydrophilic loop–loop interactions to regulate PIN2 dynamics | PNAS
PIN-FORMED (PIN) auxin transporters are essential for plant development, relying on asymmetric localization at the plasma membrane. While the centr...
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c0nc0rdance @c0nc0rdance.bsky.social · 27/09/2026
I'll save you the click-through: A lab at University of Copenhagen had been feeding draft manuscripts & data into "Claude Science" & then Anthropic announces a discovery that this lab made a year ago but hasn't published yet. It's plausible that Claude found the same signatures independently...
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Rasmus Jensen @rasmusjensen.bsky.social · 25/09/2026
🎉 Out today in Cell: the paper I've been looking forward to sharing for a long time 🎉 We used cryo-ET to find a molecular machine nobody knew existed on the surface of a minimal bacterium, and worked out what it does. 🧵(1/7) #TeamTomo #cryoET
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MwahahahahahadScientist @mads100tist.bsky.social · 25/09/2026
This is it. This is what everyone is enabling by humoring genAI: you spend months writing something that took you years to get at, for an opaque algorithm that a few control to spit a number and cut you off right there and then. This is what we're up against 🧪
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Kresten Lindorff-Larsen @lindorfflarsen.bsky.social · 24/09/2026
Pretty cool Using expandable DNA-origami rings with site-specifically tethered FG-Nups as mechanically responsive NPC mimics
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Reposted by Marcin J. Suskiewicz
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 23/09/2026
RNF213 M1-ubiquitinates damaged mitochondria to activate pro-inflammatory NF-κB signaling www.biorxiv.org/content/10.64898/20…
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Reposted by Marcin J. Suskiewicz
Kevin K. Yang 楊凱筌 @kevinkaichuang.bsky.social · 22/09/2026
Use reward-guided search in a generative model's latent space to design high-affinity protein binders to proteins and carbohydrates. @karstenkreis.bsky.social @pierceogden.bsky.social www.biorxiv.org/content/10.6...
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Cathy Spangler @cathyspangler.bsky.social · 22/09/2026
I'm excited to share our new preprint, where we show that fine-tuning gold nanoparticle conjugation to different Fab structural elements can produce powerful, rigidly coupled, labeling tools for in-situ cryo-ET. Take a look if you want to see an AuNP in an EM map!🔬🧠 www.biorxiv.org/content/10.6...
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Izabela Sumara @sumaralab.bsky.social · 22/09/2026
Very proud of our new publication in EMBO Molecular Medicine 🥳, where we describe an antimitotic that selectively inhibits tumor growth without affecting normal tissues. Big congratulations to Eva Pangou, Sushil Awal, Ksenia Krupina and all authors, and many thanks to our amazing collaborators! 🔬🥳
link.springer.com
Pharmacological inhibition of UBASH3B induces mitotic arrest and selectively reduces tumor growth - EMBO Molecular Medicine
Cancer cells tolerate mitotic errors to sustain proliferation, yet the molecular dependencies enabling this tolerance remain poorly understood and largely unexploited therapeutically. UBASH3B ensures ...
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Reposted by Marcin J. Suskiewicz
Milot Mirdita @milot.bsky.social · 16/09/2026
ColabFold 1.6.3 is out! 2.5x faster, pip-installable, ipSAE+pDockQ2 scores. Thanks Choonghwan Lee, Marielle Russo, Gyuri Kim 🐍pip install colabfold[alphafold] CF2 Sneak Peak with AF3/Boltz/Protenix/ESMFold2… 🐍pip install "colabfold[alphafold3]@git+https://github.com/sokrypton/ColabFold@af3-preview"
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 22/09/2026
It's always a treat to actually sit down and read a paper. This one's really nice. Unlike some plant hormones such as auxins that act through ubiquitylation + protein degradation, salicylic acid (SA) activates gene expression via its receptor/transcription factor NPR1. The paper elucidates
nature.com
Transcriptional activation of plant immunity by salicylic acid - Nature
A mechanistic basis for how the hormone salicylic acid promotes transcriptional activation during plant immune responses is described.
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Reposted by Marcin J. Suskiewicz
Martin Pacesa @martinpacesa.bsky.social · 21/09/2026
ʙɪɴᴅᴄʀᴀꜰᴛ2 is out, and we're not waiting for the paper. The full code drops today, free for academic and industry use. We're releasing it early so you can start designing right now, and bring its full power to the current Adaptyv competition. github.com/PacesaLab/Bi...
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Aanchal Mishra @origichals.bsky.social · 17/09/2026
El-Hadji is a gem of a person and a great scientist. One won't regret having a person with rare combo of kindness and scientific brilliance.
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Reposted by Marcin J. Suskiewicz
Danve Castroverde @danvec.bsky.social · 16/09/2026
Transcriptional activation of plant immunity by salicylic acid www.nature.com/articles/s41...
nature.com
Transcriptional activation of plant immunity by salicylic acid - Nature
A mechanistic basis for how the hormone salicylic acid promotes transcriptional activation during plant immune responses is described.
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Reposted by Marcin J. Suskiewicz
IMPRS for Living Matter @imprs-lm.bsky.social · 15/09/2026
🔍 Curious about how the proteolytic enzymes of the ubiquitin system work—and how these mechanisms can inspire new therapeutic strategies? Apply for a #PhDposition in the Gersch lab @maltegersch.bsky.social at @imprs-lm.bsky.social #proteolysis #ubiquitin #biochemistry #proteinchemistry
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Reposted by Marcin J. Suskiewicz
CNRS Chimie @cnrschimie.bsky.social · 15/09/2026
📢 #Annonce CNRS Chimie arrive sur Bluesky ! 🧪 L’un des dix instituts du @cnrs.fr, CNRS Chimie anime et coordonne la recherche en chimie en s’appuyant sur près de 14 000 personnes, 150 laboratoires et une cinquantaine de partenaires industriels. #Chimie #CNRS #Fierd’êtrechimiste
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Guillaume Gaullier @guillawme.eurosky.social · 02/09/2026
This paper was a nice side quest that started as a random encounter with @hrbridges.bsky.social at the poster session of the 2025 @ccpem.bsky.social Spring Symposium. It was very satisfying to finally see the macro domain of ALC1 that had escaped all previous structures of ALC1-nucleosome complexes!
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 15/09/2026
Today, the day of the 100th anniversary symposium for Jean-Pierre Serre in Paris, I'm thinking of this quote from another mathematician, A. Connes. I do think it's important we foster confidence in our own expertise - as a nonsense filter and departure point for creativity.
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Nature Structural & Molecular Biology @natsmb.nature.com · 14/09/2026
New online: Cryo-EM structure, enzymatic activity and genome targeting of canonical PRC1
dlvr.it
Cryo-EM structure, enzymatic activity and genome targeting of canonical PRC1
Nature Structural & Molecular Biology, Published online: 14 September 2026; doi:10.1038/s41594-026-01885-6Ciapponi et al. determine the cryo-electron microscopy structure of the canonical Polycomb repressive complex 1 holocomplex and show how its architecture coordinates complex assembly, H2A monoubiquitination and genomic targeting.
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Pedro Beltrao @pedrobeltrao.bsky.social · 14/09/2026
It is outrageous that these companies don't give back this trained model for others to make discoveries on. It is not like their competitive advantage is the model itself since they are willing to share the model among the participating companies. More info here: www.apheris.com/resources/fe...
apheris.com
Apheris
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Duncan Sproul @sproullab.bsky.social · 14/09/2026
🚨 #Postdoc position open. Want to understand non-canonical #epigenetic regulation of mammalian transcription? Come work @uoe-igc.bsky.social in Edinburgh! We’re looking for a motivated & collaborative colleague with a strong track record. 📅 14 October 2026 📢 Please share Apply here 👇
elxw.fa.em3.oraclecloud.com
Post-Doctoral Research Associate
An exciting postdoctoral position is available to research the role of epigenetic marks in gene regulation.
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Reposted by Marcin J. Suskiewicz
Elliott Lab @elliottlab.bsky.social · 14/08/2026
Huge effort from the Lab into the mechanics of the mysterious #ubiquitin like protein FAT10 – taking structural snapshots of FAT10 activation by UBA6 and transfer onto UBE2Z plus really interesting insights into InsP6 regulating FAT10 conjugation pathways: www.nature.com/articles/s41...
nature.com
Structural determinants for FAT10 activation and transfer from UBA6 to E2 enzymes - Nature Communications
Cryo-EM captures FAT10 activation and transfer from UBA6 to E2 UBE2Z, revealing FAT10 monopolises UBA6. Efficient transfer requires E2 engagement of both FAT10 UBL domains, particularly UBL2, and co-o...
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Reposted by Marcin J. Suskiewicz
Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 14/09/2026
General conclusions/models? Efficient SUMOylation as a new function of (some) BTB domains + it supports a hypothesis that structural SUMOylation motifs pre-organised for productive UBC9 engagement may be more efficiently modified than typical flexible SUMOylation motifs. Might apply to other PTMs.
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 14/09/2026
Strikingly, the SUMOylation of ZBTB38 BTB is as efficient and complete under our conditions in vitro as that of RANGAP1, so far known as the best modified SUMO substrate. We can also detect endogenous modification of flZBTB38 in cells with western and show it depends on K43.
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 14/09/2026
We found, in an AlphaFold interaction screen, the SUMO E2 UBC9 as a potential binder to BTB domain of ZBTB38. The predicted binding surface is conserved and positions K43 of ZBTB38 within UBC9 active site. We reconstituted & validated the interaction with SEC and ITC.
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 14/09/2026
Happy to share our preprint on a subset of ZBTB BTB domains as highly efficient natural SUMO 'supersubstrates'. The work was spearheaded by a great postdoc, El Hadji Cisse, with input from other team members and in collaboration with @defossezlab.bsky.social and @ucagne.bsky.social
biorxiv.org
A new class of inherently efficient SUMOylation substrates
SUMOylation is an essential eukaryotic ubiquitin-like post-translational modification that plays a central role in the regulation of various nuclear processes and stress responses. It canonically occu...
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Reposted by Marcin J. Suskiewicz
Magnus Kjærgaard @proteinmagnus.bsky.social · 13/09/2026
How does linear motifs drive dephosphorylation - and does it matter where and how strong the motifs are? These are the question Evi answers in her brand new pre-print: www.biorxiv.org/content/10.6...
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 09/09/2026
Very much looking forward to reading this story!
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The Royal Society @royalsociety.org · 27/08/2026
Professor Dame Janet M Thornton DBE FMedSci FRS is awarded the Croonian Medal and Lecture 2027 for her pioneering work in protein structural and functional bioinformatics. #RSMedals royalsociety.org/medals-and-prizes/…
A scientist sits at a desk in front of a computer display with complicated graphics on the screen. She is turned slightly and smiling at the camera.
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 07/09/2026
Do consider coming to France
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Reposted by Marcin J. Suskiewicz
Job Dekker @jobdekker.bsky.social · 24/08/2026
How do nuclear compartments form inside cell nuclei? We show RNA glues certain loci together to form a nuclear compartment. This involves special GC-rich regions of highly expressed genes that also associate with nuclear speckles, but interactions between these loci are independent of speckles!
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Kranzusch Lab @kranzuschlab.bsky.social · 02/09/2026
Discovery of chimeric RNAs and thousands of new proteins in mammalian cells – including a new regulator of inflammasome signaling! www.nature.com/articles/s41... www.jacksonimmunology.com
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Reposted by Marcin J. Suskiewicz
Max Perutz Labs Vienna @maxperutzlabs.ac.at · 02/09/2026
🚨 Out now! Special delivery for autophagy: A new @natcomms.nature.com study from the Martens lab, led by first author Elisabeth Holzer, reveals how ATG2A and ATG8-like proteins deliver key lipids to build and expand autophagosomes ➡️ tinyurl.com/ycx9v759 @univie.ac.at @meduniwien.ac.at
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Hopfner Lab @hopfnerlab.bsky.social · 02/09/2026
🧵 We’re excited to share our new bioRxiv preprint on how INO80 reads promoter-proximal DNA sequence features to position +1 nucleosomes 🧬 Amazing work by Mariia, Annika, and others! 🤩 🔗 www.biorxiv.org/content/10.6... #ChromatinBiology #StructuralBiology #Nucleosome #INO80
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Beckmann Lab @beckmannlab.bsky.social · 01/09/2026
Preprint alert: a helicase watching the ribosomal A-site 👀🧬 Our cryo-EM structure reveals how yeast Dhx29 senses mRNA hairpins forming in the A-site and positions its helicase at the mRNA entry channel to resolve them during translation elongation: doi.org/10.64898/202... #cryoEM #ribosome #RNA
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Savitski Lab @savitski-lab.bsky.social · 20/08/2026
1/5 How much phosphorylation can a single kinase deposit? In our new study with @typaslab.bsky.social out in @nature.com, phage T7's kinase (T7K) modifies almost all the E. coli proteome + more densely than all ~500 kinases do our own proteomes 🤯 www.nature.com/articles/s41...
nature.com
Pervasive phosphorylation by phage T7 kinase disarms bacterial defences - Nature
The T7 bacteriophage deactivates bacterial defence systems through T7K phosphorylation of nearly all host and phage proteins during infection.
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Itai Yanai @itaiyanai.bsky.social · 31/08/2026
Nobel Prize winner Ada Yonath sadly passed away today. She was a legend for her pioneering work on the structure of ribosomes.
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Ylva Ivarsson @ivarssonlab.bsky.social · 06/07/2026
Excited to share our preprint introducing ASHI: the Atlas of SLiM-mediated Human protein-protein Interactions. By screening 800+ domains against the human intrinsically disordered regions, we map 20,000 SLiM-mediated interactions. Many thanks to everyone involved! www.biorxiv.org/content/10.6...
biorxiv.org
An Atlas of Short Linear Motif-Mediated Human Protein-Protein Interactions
Short linear motifs (SLiMs) within intrinsically disordered protein regions mediate transient interactions crucial for cell physiology. However, the global interaction landscape of human SLiMs remains...
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Reposted by Marcin J. Suskiewicz
Katja Luck @katjaluck.bsky.social · 31/07/2026
Check out our new article if you are interested in disorder-mediated protein interactions, AlphaFold-based structural modeling and variant characterization: rdcu.be/fw2oz Dx.doi.org/10.1038/s41594-026-01846-z
dx.doi.org
Variant characterization in the intrinsically disordered human proteome - Nature Structural & Molecular Biology
Proteome-wide prediction and structural modeling of disordered protein interaction interfaces advance characterization of disease-associated variants in disordered protein regions.
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Aanchal Mishra @origichals.bsky.social · 17/08/2026
Stay tuned for this upcoming review- where transcription factors take filamentation to a whole new level, the molecular plot thickens and things get delightfully tangled. A lot more molecular intrigue coming your way soon.
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Sairam @dsairam789.bsky.social · 08/08/2026
CC (from X) I'm pleased to share our review on how Human Herpesviruses (HHVs) interact with the host SUMOylation machinery. We discuss viral strategies, molecular mechanisms, and key open questions. Read more: www.sciencedirect.com/science/arti... #Virology #Herpesvirus #SUMOylation #HHVs
sciencedirect.com
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Jeff Groh @jeffgroh.bsky.social · 28/07/2026
Avocados come in 2 varieties - A-types start each day female and switch to male midday. B-types do the reverse. In work just published from the last chapter of my PhD, we show this system evolved 40+million yrs ago and is regulated by alleles of 1 transcription factor www.pnas.org/doi/10.1073/...
pnas.org
Balanced polymorphism in a floral transcription factor underlies the ancient rhythm of daily sex alternation in avocado | PNAS
In avocado and certain wild relatives in Lauraceae, a highly synchronized daily rhythm of floral sex timing promotes cross-pollination between two ...
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 13/08/2026
Just finished reading this. A very interesting review summarising a series of recent studies, largely from the Sun Hur team, on two immunity-related transcription-related proteins, FOXP3 and AIRE, both of which homo-multimerise in interesting ways.
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Guido Barzaghi @guidobarzaghi.bsky.social · 11/08/2026
📄 That's a wrap 📄 we're excited to share that the latest from @arnaudkr.bsky.social 's lab and Judith Zaugg's lab is at last online at doi.org/10.1038/s415.... Many thanks to my co-first @valentinabaderna.bsky.social and to @embl.org for the wonderful research environment.
doi.org
Cumulative transcription factor binding and p300-mediated histone acetylation drive enhancer activation frequency - Nature Genetics
This study uses single-molecule footprinting to quantify chromatin accessibility at enhancers and promoters in mouse embryonic stem cells and to dissect the contributions of transcription factor bindi...
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Kranzusch Lab @kranzuschlab.bsky.social · 12/08/2026
The shared principles of human and bacterial antiviral immunity An honor to highlight remarkable discoveries from many labs over the past 12 years that unite previously disparate fields of how animal cells and prokaryotes defend against viruses. www.nature.com/articles/s41... rdcu.be/fzwyB
nature.com
Shared principles of human and bacterial antiviral immunity - Nature
The Review describes shared ancient, conserved mechanisms between human antiviral immunity and bacterial anti-phage systems, outlining universal principles of pathogen sensing, signalling and effector...
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Stephanie Wankowicz @stephanieaw.bsky.social · 11/08/2026
Most PDB structures report one set of coordinates. But the experimental data behind them, in both X-ray crystallography and cryo-EM, is produced by an ensemble of structures. How to extract this ensemble data at scale has been a quest in structural biology for 40+ years.
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The EMBO Journal @embojournal.org · 11/08/2026
What’s the function of embryonic ‘cytoplasmic lattices’? Using cryo-ET, @kashishsingh.bsky.social @carter-lab.bsky.social and coworkers reveal them as megadalton-size hubs of ubiquitination proteins/ubiquitin transfer link.springer.com/article/10.1...
link.springer.com
In-situ cryo-ET of mouse embryos reveals cytoplasmic lattices contain ubiquitin-charged E2-E3 ligase assemblies - The EMBO Journal
Cytoplasmic lattices (CPLs) are filamentous assemblies essential for mammalian embryonic development. They are known to regulate organelle organization, spindle assembly, and protein homeostasis, but ...
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 10/08/2026
Nice to see this interesting preprint published in the final form. Will read it. Congratulations to the Authors
cell.com
Large-scale quaternary structural transitions underlie gain of function of SPOP cancer mutations
Gain-of-function mechanisms of enzymes are generally poorly understood. Cuneo et al. reveal that the ubiquitin ligase component SPOP exists in an equilibrium between an active filament and an autoinhi...
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Marcin J. Suskiewicz @msuskiewicz.eurosky.social · 10/08/2026
I need to learn more about recent transcription factor (TF) biochemistry/structural biology/biology, plan to set myself a reading regime. Any recommendations on recent (5 years?) TF-related papers???
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