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Raheleh Rahbari

@r-rahbari.bsky.social
308 followers 185 following 18 posts

Group Leader @Wellcome Sanger Institute. @CRUK fellow | Interested in mutations acquired during aging and their impact across generation.

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Reposted by Raheleh Rahbari
Maya Voichek @mayavoichek.bsky.social · 24/09/2026
Super excited to share my postdoctoral work at @imbavienna.bsky.social @viennabiocenter.bsky.social - We discovered that some retrotransposons, or "jumping genes" 🧬, are able to spread from cell to cell via a new viral infectivity route. A short thread: 🧵👇 (1/7)
AI-generated illustration of the soma-to-germline transmission of retrotransposons described in our work
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Raheleh Rahbari @r-rahbari.bsky.social · 18/09/2026
for this: What determines the risk of passing a new disease-causing mutation to a child? 🤔
cell.com
Mutation timing, accumulation, and selection in the male germline shape inheritance risk for developmental disorders
Neville et al. combine trio whole-genome sequencing with ultra-accurate sperm sequencing to quantify how de novo mutation timing and selection shape transmittable disease risk. Early embryonic mosaicism can create an uncommon elevated transmission risk, whereas universal age-associated mutation accumulation and spermatogonial selection account for most paternal pathogenic de novo mutations.
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Reposted by Raheleh Rahbari
Inigo Martincorena @imartincorena.bsky.social · 03/09/2026
Big paper alert! This project has been years in the making. A comprehensive description of somatic mutation rates and signatures across 53 tissues or cell types using NanoSeq. A large collective effort led by Mimy Pham, Mike Stratton and @r-rahbari.bsky.social. www.biorxiv.org/content/10.6...
biorxiv.org
A comprehensive atlas of somatic mutation rates and mutational signatures in normal human cells
Over the course of a lifetime, somatic mutations accrue in normal human cells, causing variation in cell phenotype and engendering somatic evolution with outcomes ranging from the adaptive immune syst...
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Reposted by Raheleh Rahbari
The American Journal of Human Genetics @ajhgnews.bsky.social · 15/07/2026
🧬New from @r-rahbari.bsky.social & co! 📄Landscape of parental postzygotic mutations across >11,000 rare disease trios
cell.com
Landscape of parental postzygotic mutations across >11,000 rare disease trios
Garcia-Salinas et al. detect early parental postzygotic mutations from standard-depth trio WGS across 12,015 rare disease trios, identifying 1,015 high-confidence events. Their catalog reveals distinc...
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Reposted by Raheleh Rahbari
Björn Schumacher @bjornschumacher.bsky.social · 22/02/2026
🧬🧬🧬 REGISTRATION JUST OPENED! Make sure you join our DNA REPAIR MEETING 2026 ON PHYSIOLOGICAL CAUSES AND CONSEQUENCES OF GENOME INSTABILITY in Cologne, September 7-9, organized by the German Society for DNA Repair (DGDR) and the @dfg.de Research Unit 5504. www.for-5504.com/en/197/Confe...
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Raheleh Rahbari @r-rahbari.bsky.social · 02/02/2026
www.cell.com/cell/fulltex...
cell.com
Hallmarks of cancer—Then and now, and beyond
Hanahan revisits the evolving framework of cancer hallmarks, synthesizing 25 years of conceptual refinement into a multidimensional view of tumor biology. This review highlights how aberrant capabilit...
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Raheleh Rahbari @r-rahbari.bsky.social · 08/01/2026
aacrjournals.org/cancerdiscov... congratulations @landau.bsky.social & team. scG2P sounds really exciting!
aacrjournals.org
Genotype-to-phenotype mapping of somatic clonal mosaicism via single-cell co-capture of DNA mutations and mRNA transcripts
Abstract. Somatic mosaicism is pervasively observed in human aging, with clonal expansions of cells harboring mutations in recurrently mutated driver genes. Bulk sequencing of tissues captures mutatio...
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Reposted by Raheleh Rahbari
Matt Coelho @mattcoelho.bsky.social · 06/01/2026
new year, new job?! Exciting postdoc position opening in my lab at the Wellcome Sanger Institute. Fully funded by CRUK sanger.wd103.myworkdayjobs.com/en-US/Wellco... find out more at www.coelho-lab.com
sanger.wd103.myworkdayjobs.com
Postdoctoral Fellow – A variant to function map of lung cancer
Do you want to help us improve human health and understand life on Earth? Make your mark by shaping the future to enable or deliver life-changing science to solve some of humanity’s greatest challenge...
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Raheleh Rahbari @r-rahbari.bsky.social · 23/12/2025
cell.com
Hepatic adaptation to chronic metabolic stress primes tumorigenesis
Environmental stresses, such as a high-fat diet, disrupt liver cell balance by promoting pro-survival, developmental, and regenerative programs while impairing key tissue functions. These stress respo...
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Reposted by Raheleh Rahbari
Nature Portfolio @natureportfolio.nature.com · 19/12/2025
A paper in Nature presents a detailed map of human chromosomes within the nucleus. This resource provides a foundation for an improved understanding of how the physical layout of human DNA is associated with biological expression. go.nature.com/4pI8knB 🧬 🧪
This is figure 1, which gives an overview of the approach to generate and integrate genomic data on the 4D nucleome.
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Reposted by Raheleh Rahbari
Jonathan Pritchard @jkpritch.bsky.social · 13/12/2025
Our latest preprint revisits the classic model of mutation-selection balance. Do human recessive genes fit Haldane's 100-year old model? This work is by the wonderful @jonj-udd.bsky.social, and co-mentored by @jeffspence.github.io www.biorxiv.org/content/10.6...
biorxiv.org
Allele Frequencies at Recessive Disease Genes are Mainly Determined by Pleiotropic Effects in Heterozygotes
The classic theory of mutation-selection balance predicts the equilibrium frequency of genetic variation under negative selection. The model predicts a simple relationship between the total frequency ...
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Raheleh Rahbari @r-rahbari.bsky.social · 12/12/2025
AI agents for biology 🤖
nature.com
Artificial intelligence agents for biology - Nature Methods
Artificial intelligence agents may have a transformative effect on how biological research is performed.
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Reposted by Raheleh Rahbari
Jonathan Pritchard @jkpritch.bsky.social · 11/12/2025
GWAS has been an incredible discovery tool for human genetics: it regularly identifies *causal* links from 1000s of SNPs to any given trait. But mechanistic interpretation is usually difficult. Our latest work on causal models for this is out yesterday: www.nature.com/articles/s41... A short🧵:
nature.com
Causal modelling of gene effects from regulators to programs to traits - Nature
Approaches combining genetic association and Perturb-seq data that link genetic variants to functional programs to traits are described.
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Raheleh Rahbari @r-rahbari.bsky.social · 11/12/2025
It would be necessary to adapt ultra accurate sperm screening methods like NanoSeq method for sperm donors. This technology can identify low-frequency mutations unique to sperm, addressing critical gaps in standard screening methods, as highlighted by this unfortunate story!
bbc.com
Sperm from donor with cancer-causing gene was used to conceive almost 200 children
Some children have already died and only a minority who inherit the mutation will escape cancer in their lifetimes.
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Wellcome Sanger Institute @sangerinstitute.bsky.social · 08/10/2025
A hidden evolutionary process has been uncovered in sperm — where certain harmful DNA changes are naturally favoured as men age. This gives some changes a competitive edge and increases the risk of genetic conditions. 🔬 Read here 👇 www.sanger.ac.uk/news_item/hi...
sanger.ac.uk
Hidden evolution in sperm raises disease risk for children as men age
Researchers reveal how certain harmful DNA variations become more common in sperm as men age, raising genetic disease risk for offspring.
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Reposted by Raheleh Rahbari
Wellcome Sanger Institute @sangerinstitute.bsky.social · 03/11/2025
Read ‘Complex de novo structural variants are an underestimated cause of rare disorders’ from @sangerinstitute.bsky.social, @genomicsengland.bsky.social, @cuh.nhs.uk and collaborators in @natcomms.nature.com here: www.nature.com/articles/s41...
nature.com
Complex de novo structural variants are an underestimated cause of rare disorders - Nature Communications
De novo structural variants are an important cause of rare disorders but remain poorly understood. Here, the authors analyse over 12,000 families and reveal the prevalence, diversity, and clinical imp...
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Raheleh Rahbari @r-rahbari.bsky.social · 09/12/2025
www.nature.com/articles/s41...
nature.com
Spatial architecture of development and disease - Nature Reviews Genetics
Spatial omics has empowered the discovery of developmental and disease-associated molecular signatures, cell states and multicellular niches, as well as the evaluation of disease heterogeneity within ...
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Reposted by Raheleh Rahbari
Nature Portfolio @natureportfolio.nature.com · 07/12/2025
GLP-1 drugs can help people lose weight by quelling hunger queues. Nature reports on the work by scientists testing if these drugs can help to cut cravings for cigarettes, alcohol and opioids. 🧪
go.nature.com
Will blockbuster obesity drugs revolutionize addiction treatment?
Scientists are testing whether GLP-1 drugs can help to cut cravings for cigarettes, alcohol and opioids — as well as food.
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Raheleh Rahbari @r-rahbari.bsky.social · 07/12/2025
www.linkedin.com/posts/qian-z...
linkedin.com
HLA-DQA1*05:01 and DQA1*05:05 inform choice of anti-TNF and concomitant use of immunomodulators in patients with inflammatory bowel disease | Qian Zhang
We can now better inform anti-TNF prescribing through HLA testing! Huge thanks to Tauseef Sharip, Chris Roberts, Eathar Shakweh MBBS BSc MRCP, Miles Parks, Tariq Ahmad, as well as Laura Fachal and Ca...
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Reposted by Raheleh Rahbari
Vincent J Lynch 🐘🦣🦥 🦇🐋🐢🐍 @devoevomed.bsky.social · 07/12/2025
media.tenor.com
a black and white cartoon of a man eating a hamburger and saying i 'll gladly pay you tuesday
ALT: a black and white cartoon of a man eating a hamburger and saying i 'll gladly pay you tuesday
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Raheleh Rahbari @r-rahbari.bsky.social · 05/12/2025
www.sanger.ac.uk/news_item/or...
sanger.ac.uk
Order of cancer-driving mutations affects the chance of tumour development
Scientists reveal that mutation order influences tumour growth in the intestine.
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Reposted by Raheleh Rahbari
Wellcome Sanger Institute @sangerinstitute.bsky.social · 05/12/2025
This study provides important results that show the sequence of cancer-driving mutations influences the likelihood of tumour development in the intestine, offering a deeper understanding of early cancer progression. 👇 www.sanger.ac.uk/news_item/or...
sanger.ac.uk
Order of cancer-driving mutations affects the chance of tumour development
Scientists reveal that mutation order influences tumour growth in the intestine.
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Reposted by Raheleh Rahbari
Gosia Trynka @gosiatrynka.bsky.social · 04/12/2025
Hiring Senior Computational Postdoc to lead large-scale scRNAseq analysis for Project JAGUAR, one of the world’s most comprehensive single-cell immune resources from Latin American ancestries. If big data, global partnerships, human diversity and immune regulation excite you, apply! bit.ly/3XyFWrW
sanger.wd103.myworkdayjobs.com
Senior Postdoctoral Fellow
Do you want to help us improve human health and understand life on Earth? Make your mark by shaping the future to enable or deliver life-changing science to solve some of humanity’s greatest challenge...
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Reposted by Raheleh Rahbari
Itai Yanai @itaiyanai.bsky.social · 04/12/2025
Metamorphosis is nature at its weirdest and historian Oren Harman has just written a beautiful book about it. Also check out this link for free access to the review I wrote about the book for this week's Nature: nature.com/articles/d41...
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Raheleh Rahbari @r-rahbari.bsky.social · 04/12/2025
www.nature.com/articles/s41...
nature.com
Whole-genome landscapes of 1,364 breast cancers - Nature
Whole-genome and transcriptome analysis of 1,364 cases of breast cancer from South Korea broadens our understanding of breast cancer biology and reveals genomic features that connect tumour ...
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Reposted by Raheleh Rahbari
Wellcome Sanger Institute @sangerinstitute.bsky.social · 27/11/2025
Struggling to navigate the grant-funding maze? Discover expert guidance and practical tips to help you transform your idea into a successful, funded project ✅ Read more: sangerinstitute.blog/2025/11/26/how…
Infographic titled 'How to get grant funding' lists 17 steps with icons, including identifying opportunities, starting early, using keywords, and auditing your project.
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Reposted by Raheleh Rahbari
Vladimir (Vova) Seplyarskiy @vseplyarskiy.bsky.social · 26/11/2025
Transcription start sites show a strong influx of heritable variants arising in early development. Our new paper is now in Nat. Comms: www.nature.com/articles/s41... It would be interesting to see this effect in the new mosaic-mutation dataset from @r-rahbari.bsky.social and @isaacgs94.bsky.social.
nature.com
Transcription start sites experience a high influx of heritable variants fueled by early development - Nature Communications
The impact of transcription on germline mutagenesis remains poorly understood. Here, the authors identify a mutational hotspot at transcription start sites in the human germline that is significantly ...
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Reposted by Raheleh Rahbari
Oxford Medical Sciences Division @medsci.ox.ac.uk · 21/11/2025
NEWS: Study reveals how drug resistance develops early in targeted AML therapy A new study led by researchers at @rdm.ox.ac.uk has shown that resistance to a targeted treatment for acute myeloid leukaemia (AML) can develop much earlier than expected.
medsci.ox.ac.uk
Study reveals how drug resistance develops early in targeted AML therapy
A new study led by researchers at the MRC Molecular Haematology Unit has shown that resistance to a targeted treatment for acute myeloid leukaemia (AML) can develop much earlier than expected.
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Reposted by Raheleh Rahbari
Vijay G. Sankaran @bloodgenes.bsky.social · 17/11/2025
Honored to be recognized by @usnews.com as a 2025 #BestLeader alongside so many incredible colleagues and individuals I admire! www.usnews.com/news/best-le...
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Trevor Graham @trevorgraham.bsky.social · 17/11/2025
@kevinmonahan.bsky.social & I have an open clinical #PhD position between @stmarkshospital.bsky.social and @icr.ac.uk If you're interested in the biology of pre-cancer in the bowel & want to translate biology for cancer prevention this one could be for you... funded by the brilliant #40tude
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Reposted by Raheleh Rahbari
Dan Landau @landau.bsky.social · 14/10/2025
Big, beautiful trees!! SMART-PTA for whole-genome+transcriptome on thousand of single cells from the normal human esophagus 🤯 Massively scaling up the power of scWGS to build deep phylogenies and chart somatic evolution from birth throughout life. www.biorxiv.org/content/10.1...
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Isaac García @isaacgs94.bsky.social · 28/10/2025
New preprint from another part of my PhD! 📝👇 Some mutations arise after fertilisation 🧬, so early they can appear in both a parent’s body and their germ cells. By analysing family trio genomes 👪, we built one of the largest catalogues of these “hidden” inherited variants yet. tinyurl.com/mvns2ytv
tinyurl.com
Landscape of parental postzygotic mutations in >11,000 rare disease trios
Postzygotic mutations (PZMs) arising post-fertilisation, prior to primordial germ cell specification, may be subsequently inherited by both somatic and germ cells, causing somatic mosaicism in the par...
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Reposted by Raheleh Rahbari
Hilary Martin @hilarycmartin.bsky.social · 29/10/2025
Another nice collaboration with @r-rahbari.bsky.social 's lab, PhD work by @isaacgs94.bsky.social on postzygotic mutations in the Genomics England 100,000 project.
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Matthew Neville @mattneville.bsky.social · 08/10/2025
If you saw preprint, biggest two updates are: Much improved discussion + variant calls now accessible If you'd like an accessible summary check out this great article from @mjflepage.bsky.social in New Scientist: For science thread read on! [2/n] institutions.newscientist.com/article/2499...
institutions.newscientist.com
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Matthew Neville @mattneville.bsky.social · 08/10/2025
Now published! Our paper on: (1) Accurate sequencing of sperm at scale (2) Positive selection of spermatogenesis driver mutations across the exome (3) Offspring disease risks from male reproductive aging [1/n] www.nature.com/articles/s41...
nature.com
Sperm sequencing reveals extensive positive selection in the male germline - Nature
A combination of whole-genome NanoSeq with deep whole-exome and targeted NanoSeq is used to accurately characterize mutation rates and genes under positive selection in sperm cells.
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Nuria Lopez-Bigas @nlbigas.bsky.social · 08/10/2025
Hotspots of human mutation point to clonal expansions in spermatogonia by @vseplyarskiy.bsky.social, Shamil Sunyaev et al www.nature.com/articles/s41...
nature.com
Hotspots of human mutation point to clonal expansions in spermatogonia - Nature
A systematic statistical genetics approach discovers CES drivers as hotspots of human de novo mutation and shows that clonal expansions in germline may both modulate the prevalence of disorders and lead to false-positive disease associations.
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Reposted by Raheleh Rahbari
Nuria Lopez-Bigas @nlbigas.bsky.social · 08/10/2025
🚨 New paper alert! Sex and smoking bias in the selection of somatic mutations in human bladder www.nature.com/articles/s41... by @raquelbmi.bsky.social, @ferriol.bsky.social et al (in collaboration with Rosana Risques lab in @uwmedicine.bsky.social)
nature.com
Sex and smoking bias in the selection of somatic mutations in human bladder - Nature
Sex bias and association with smoking history identified in the landscape of driver mutations and clonal expansions in normal human bladder tissue may explain the higher bladder cancer risk in men and smokers.
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Aylwyn Scally @aylwyn-scally.bsky.social · 16/05/2025
This was a great collaboration between @geneticscam.bsky.social & @sangerinstitute.bsky.social, specifically the @hilarycmartin.bsky.social and @r-rahbari.bsky.social groups. We are also grateful to @genomicsengland.bsky.social for generating and supporting this fantastic resource.
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Reposted by Raheleh Rahbari
Hilary Martin @hilarycmartin.bsky.social · 16/05/2025
A fun collaboration with @aylwyn-scally.bsky.social and @r-rahbari.bsky.social's groups using data from @genomicsengland.bsky.social . Paper here: rdcu.be/embGi
urldefense.proofpoint.com
The impact of ancestral, genetic, and environmental influences on germline de novo mutation rates and spectra
Nature Communications - Here the authors analyze de novo mutations in >10,000 parent-offspring trios and find that ancestry and smoking independently associate with mutation rate, but that...
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Reposted by Raheleh Rahbari
Isaac García @isaacgs94.bsky.social · 16/05/2025
It's finally out people ✅🗞️! Check out the final version of our work exploring factors influencing the germline mutation rate and spectra on ~10,000 WGS family trios 🧬👨‍👩‍👦! www.nature.com/articles/s41...
nature.com
The impact of ancestral, genetic, and environmental influences on germline de novo mutation rates and spectra - Nature Communications
Here the authors analyze de novo mutations in >10,000 parent-offspring trios and find that ancestry and smoking independently associate with mutation rate, but that common genetic variants likely c...
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Reposted by Raheleh Rahbari
Dmitri Petrov @petrovadmitri.bsky.social · 25/04/2025
A ridiculous amount of very careful work by @jahemker.bsky.social and coauthors gave a clear answer - one needs ultra-long and not just long reads to call SVs correctly in Drosophila. Now we are ready to quantify evolutionary impact of Drosophila SVs. Let us know what you think!
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Sarah Aitken @s-j-aitken.bsky.social · 26/03/2025
My lab at hiring! - we have TWO postdoc positions (one computational, one wet lab focussed) at Yale @yaleschoolofmed.bsky.social, working closely with our group members at University of Cambridge, UK @cambridgeuni.bsky.social Please help to spread the word! Adverts with full details below ⬇️
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Sudarshan Pinglay @sudpinglay.bsky.social · 31/01/2025
Now out in @science.org w/ @jshendure.bsky.social we present 'Genome-shuffle-seq': a method to shuffle mammalian genomes and characterize the impact of structural variants (SVs) with single-cell resolution in one experiment. www.science.org/doi/10.1126/...
science.org
Multiplex generation and single-cell analysis of structural variants in mammalian genomes
Studying the functional consequences of structural variants (SVs) in mammalian genomes is challenging because (i) SVs arise much less commonly than single-nucleotide variants or small indels and (ii) ...
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Reposted by Raheleh Rahbari
Leopold Parts @leopoldparts.bsky.social · 31/01/2025
We're delighted to share our work on scrambling the human genome using prime editing, repetitive elements, and recombinases in @science.org , led by @jonaskoeppel.bsky.social , @f-raphael.bsky.social , with @proftomellis.bsky.social and George Church. www.science.org/doi/10.1126/...
science.org
Randomizing the human genome by engineering recombination between repeat elements
We lack tools to edit DNA sequences at scales necessary to study 99% of the human genome that is noncoding. To address this gap, we applied CRISPR prime editing to insert recombination handles into re...
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Reposted by Raheleh Rahbari
Leopold Parts @leopoldparts.bsky.social · 31/01/2025
If you’d like to work on such projects, our team is hiring postdocs! We are part of the new Generative and Synthetic Genomics programme with @benlehner.bsky.social and Jussi Taipale, combining data generation at scale with AI to solve biology.Check out sanger.wd103.myworkdayjobs.com/en-US/Wellco...
sanger.wd103.myworkdayjobs.com
Postdoctoral Fellow | Generative and Synthetic Genomics
Do you want to help us improve human health and understand life on Earth? Make your mark by shaping the future to enable or deliver life-changing science to solve some of humanity’s greatest challenge...
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Reposted by Raheleh Rahbari
bioRxiv Genetics @biorxiv-genetic.bsky.social · 01/02/2025
The distribution of highly deleterious variants across human ancestry groups www.biorxiv.org/content/10.1101/202…
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Trevor Graham @trevorgraham.bsky.social · 20/01/2025
Freddie Whiting in our group wrote this thoughtful commentary on @karunamdphd.bsky.social's recent paper that explored cell state changes and plasticity in colorectal cancer evolution. He concludes we need to better understand epigenetic control of plasticity. authors.elsevier.com/c/1kTSf5Sx5g...
authors.elsevier.com
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Vladimir (Vova) Seplyarskiy @vseplyarskiy.bsky.social · 06/01/2025
Two months ago, an amazing preprint by @r-rahbari.bsky.social 's group studied positive selection in sperm via direct sequencing. With her and @mattneville.bsky.social 's help, we compared findings—remarkably concordant! Our LoF genes show 16x more mutations, GoF sites 524x more.
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Nature Portfolio @natureportfolio.nature.com · 12/12/2024
A potential new mRNA-based therapy for pre-eclampsia is demonstrated in a mouse study published in Nature. The method involves targeted delivery of mRNA to the placenta to restore normal maternal blood pressure and improve foetal health. 🧪
go.nature.com
Placenta-tropic VEGF mRNA lipid nanoparticles ameliorate murine pre-eclampsia - Nature
A platform for mRNA lipid nanoparticle delivery to the placenta to treat pre-eclampsia is shown to improve fetal and maternal health in mice and has potential clinical applications in obstetric disorders and women's health.
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Nora Pyenson @norapyenson.bsky.social · 12/12/2024
Is it “winner-takes all” when the simplest living things compete? Check out my fresh publication on phage coexistence in Science and a thread below🧵 www.science.org/doi/10.1126/...
science.org
Diverse phage communities are maintained stably on a clonal bacterial host
Bacteriophages are the most abundant and phylogenetically diverse biological entities on Earth, yet the ecological mechanisms that sustain this extraordinary diversity remain unclear. In this study, w...
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