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Mingqi Han

@mingqihan.bsky.social
472 followers 415 following 8 posts

Assistant Professor/CPRIT Scholar@CSI_MD Anderson Cancer Center (mhan3@mdanderson.org) Exploring metabolism, organelle communication and quantitative imaging

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Reposted by Mingqi Han
Metabolism in Development and Physiology, Virtual Seminar Series @devmetphys.bsky.social · 01/10/2026
We are very excited for the next Zoom seminar of Metabolism in Development & Physiology! When: Thursday, 8th of October, 4pm CSET/ 2pm GMT/ 9am CDT Our speakers: Prof. Ralph DeBerardinis (UT Southwestern) @rjdlab.bsky.social Shefali Shefali (Indiana University) @iamshef.bsky.social
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 01/10/2026
Pleased to share a new paper with Ling Cai, demonstrating the use of population genomics to identify heterozygous variants in a cobalamin processing gene as a modulator of circulating vitamin B12 levels.
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The EMBO Journal @embojournal.org · 15/07/2026
ISSUE 14: Review on skin aging SPACA9 and MNMIP1 on spermatid manchette microtubules DNA damage-activated kinase in bacterial immunity MORC3 regulates interferon via tandem repeat enhancer Cover: Sekler, Shirihai and coworkers link.springer.com/journal/4431...
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Gina DeNicola @ginadenicola.bsky.social · 15/07/2026
⚠️ Abstracts due by July 24th! FREE virtual 2026 Cancer Metabolism Showcase & Workshop — September 8–9 ✅ Short talks & poster sessions ✅ Career panels & workshops ✅ Career Keynote from Ralph DeBerardinis 📝 Submit & register: www.cancermetabolismshowcase.org Please share!
cancermetabolismshowcase.org
2026 Cancer Metabolism Showcase & Workshop
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Trudy G. Oliver @tgoliver.bsky.social · 23/06/2026
Excited that this story is now published at @theaacr.bsky.social Cancer Research! #Squamous tumors have transcriptional heterogeneity that resembles normal lung cell states, including a lowly-dividing stress-resistant KRT13+ #hillock-like state driven by KLF4. aacrjournals.org/cancerres/ar...
aacrjournals.org
KLF4 Promotes a KRT13+ Hillock-Like State in Lung Squamous Cell Carcinoma
Abstract. Lung squamous cell carcinoma (LUSC) is a basal-like subtype of lung cancer with limited treatment options. While prior studies have identified tumor-propagating cell states in squamous tumor...
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Reposted by Mingqi Han
Sholto David @sholtodavid.bsky.social · 17/05/2026
Surprised to discover that Thermo Fisher appears to show a fake western blot for the validation of one of their p53 antibodies. I've added a diagram to show the very similar bands. This does not appear to be one of the "published figures" but their own internal data.
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Xinnan Wang Lab @xinnanwanglab.bsky.social · 15/05/2026
Our lab’s first try on single cell transcriptomics and cancer! We found a macrophage to T cell immunosuppressive axis in the glioma TME. A MIRO1 binding probe disables this cell circuitry and reduces tumor population!
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Reposted by Mingqi Han
Albert Koong @ackoongmdphd.bsky.social · 14/05/2026
Pleased to share our latest review on #cuproptosis and relevance to #cancer including radiotherapy. @mdanderson.bsky.social #radonc #endcancer www.sciencedirect.com/science/arti...
sciencedirect.com
Metabolic underpinnings of cuproptosis
Cuproptosis is a recently defined form of regulated cell death (RCD) driven by copper-induced mitochondrial proteotoxic stress. Distinct from other RC…
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Trudy G. Oliver @tgoliver.bsky.social · 13/05/2026
The Oliver Lab is #hiring. I have never been more excited about the next project & the potential to help people with cancer. If you want to transform #SCLC & how we think about #cancer in general, please come join us! #postdoc #PhD Thanks to ChatGPT for a high octane ad with more info below!
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Bart Deplancke @bartdeplancke.bsky.social · 11/05/2026
Excited to announce the EPFL Latsis Symposium 2026: Decoding the Cell: Modeling, Predicting, and Engineering Cellular States 📅 Oct 29–30, 2026 📍 Olympic Museum, Lausanne 🇨🇭 Registration: latsis2026.epfl.ch/event/1/ #SingleCell #SystemsBiology #SyntheticBiology #AI #Multiomics #CellEngineering
latsis2026.epfl.ch
EPFL Latsis Symposium 2026
Join us in Lausanne to connect with the global community shaping the future of cell understanding and engineering.
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Mathieu Ferron @mathieuferron.bsky.social · 29/04/2026
I am very happy to share with you our most recent publication! In this study, we uncovered a new function for vitamin K-dependent carboxylation in the regulation of bone resorption. www.nature.com/articles/s41...
nature.com
Vitamin K-dependent carboxylation in osteoblasts regulates bone resorption through GAS6 in male mice - Bone Research
Bone Research - Vitamin K-dependent carboxylation in osteoblasts regulates bone resorption through GAS6 in male mice
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Johanna Joyce @johannajoyce.bsky.social · 16/04/2026
What does it take to truly understand #cancer in all of its complexity? Delighted to share our Review in Cell "Cancer ecosystems: A dynamic interplay across scales" with Daniela Quail, where we propose a multi-scale framework connecting tumor ecology with physiology 🧪⚕️ www.cell.com/cell/fulltex...
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Juan C. Landoni @jclandoni.bsky.social · 03/04/2026
Our paper is now out in Science! Super excited to share our discovery that #mitochondria #pearling is the elusive mechanism driving the regular distribution and inheritance of #mtDNA nucleoids 🧬 [1/6]
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Julien Sage @juliensage.bsky.social · 31/03/2026
New preprint from the lab! Close collaboration with Silvia von Karstedt @vonkarstedtlab.bsky.social and her lab. We find that #SCLC cells are strikingly dependent on exogenous cysteine #LungCancer #CancerMetabolism #Ferroptosis 🧵 biorxiv.org/content/10.64898/2026.03.27.714827v1
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 19/03/2026
New paper from Dr. Wen Gu on the impact of L-2-hydroxyglutarate deficiency on neural stem cell function and neuronal differentiation. Interesting connection between an IEM and chronic oncogene activation. Thanks to Dr. Bushra Afroze and her patients for participating. www.jci.org/articles/vie...
jci.org
JCI - L-2-hydroxyglutarate impairs neuronal differentiation through epigenetic activation of MYC expression
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 03/03/2026
Incredible chance to learn about genetics, from the fundamentals to the latest science. I attended this course when I was a PhD student in the 90s and have lectured in it for the last dozen or so. And science aside, there's nowhere better to be in late July than Bar Harbor, ME. See you there.
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Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 25/02/2026
Fascinating discovery by team @stanfordbiosci.bsky.social www.cell.com/cell/abstrac...
cell.com
Nutrient competition predicts gut microbiome restructuring under drug perturbations
Systematic profiling of 707 drugs on their impact on stool-derived microbial communities shows that nutrient competition explains and predicts species shifts under drug treatment and that post-drug re...
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Mathieu Ferron @mathieuferron.bsky.social · 02/02/2026
Principal investigator job alert @ircm.bsky.social! We are recruiting a new junior faculty member working in the field of cancer. Apply before February 22nd. Contact me if you have more questions. www.ircm.qc.ca/en/position-...
ircm.qc.ca
Research Unit Director – IRCM Cancer Research Center
Job reference code: IRCM-Cancer
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 15/01/2026
www.cancermoleculartherapeutics.org/event-detail...
cancermoleculartherapeutics.org
CMTRA 2026 Annual Meeting | Cancer Molecular The
Please use Join us for the CMTRA 2026 Annual Meeting at the spectacular Snowbird Mountain Resort in the Wasatch Mountains of Salt Lake City, Utah. Engage in insightful discussions, network with indust...
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Gina DeNicola @ginadenicola.bsky.social · 06/01/2026
A practical, anesthesia-free platform for in vivo metabolic tracing! Preprint: doi.org/10.64898/202.... Questions? Reach out—happy to share protocols!
doi.org
A simple, anesthesia-free infusion technique for in vivo metabolic tracing
Accurate metabolic flux analysis requires tracer delivery that preserves physiological metabolism. Current methods may distort metabolism through anesthesia, surgical stress, or complex procedures. We...
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James Olzmann @olzmannlab.bsky.social · 12/12/2025
Happy to see our News & Views is out! We highlight two landmark papers demonstrating the potential for therapeutic targeting of FSP1 and #ferroptosis in in vivo cancer models. Beautiful work from @ubellackerlab.bsky.social, Thales Papagiannakopoulos, and colleagues. 🥳 www.nature.com/articles/s41...
nature.com
In vivo models bring FSP1 inhibitors to life - Nature Cell Biology
FSP1 is a key suppressor of lipid peroxidation and ferroptosis, yet it is largely dispensable in standard cell culture models. Two new studies now show that FSP1 becomes essential for tumour growth in...
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Andy Moore @aaandmoore.bsky.social · 12/12/2025
This movie shows lysosomes (orange) and keratin (gray) in a cultured cell over 10 minutes.
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Christian Frezza @frezzalab.bsky.social · 11/12/2025
Spatial and morphological organization of mitochondria in neurons across a connectome | Science www.science.org/doi/10.1126/...
science.org
Spatial and morphological organization of mitochondria in neurons across a connectome
Neuronal function depends on mitochondria, but little is known about their organization across neurons. Using an electron microscopy Drosophila connectome, we uncovered quantitative rules governing th...
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Andy Moore @aaandmoore.bsky.social · 21/11/2025
Attempt number seven at uploading this video of intermediate filaments in an enormous COS7 cell. I have a feeling the BlueSky compression will not do it any favors.
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Christian Frezza @frezzalab.bsky.social · 13/11/2025
Immunometabolic reprogramming of macrophages by gut microbiota-derived cadaverine controls colon inflammation: Cell Host & Microbe www.cell.com/cell-host-mi...
cell.com
Immunometabolic reprogramming of macrophages by gut microbiota-derived cadaverine controls colon inflammation
de Oliveira Formiga et al. present that gut-microbiota-derived cadaverine reprograms macrophage energy metabolism in a concentration-dependent fashion, promoting either anti- or pro-inflammatory immun...
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 06/11/2025
Here's the beautiful paper from @chembiohub.bsky.social reporting NUDT5's role in purine synthesis. I cannot emphasize enough how gracious and open these authors were when we all realized we were working on the same mechanism.
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 06/11/2025
1/New paper from Zheng Wu, Phong Nguyen et al. @cri-utsw.bsky.social shows how cells balance the two pathways that produce purine nucleotides: de novo purine biosynthesis (DNPB) and purine salvage. The surprising mechanism involves NUDT5, a Nudix hydrolase www.science.org/doi/10.1126/...
science.org
NUDT5 regulates purine metabolism and thiopurine sensitivity by interacting with PPAT
Cells generate purine nucleotides through de novo purine biosynthesis (DNPB) and purine salvage. Purine salvage represses DNPB to prevent excessive purine nucleotide synthesis through mechanisms that ...
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Christian Frezza @frezzalab.bsky.social · 05/11/2025
www.nature.com/articles/s41... Lymph node environment drives FSP1 targetability in metastasizing melanoma
nature.com
Lymph node environment drives FSP1 targetability in metastasizing melanoma - Nature
Targeting FSP1 in lymph nodes has considerable potential for blocking melanoma progression.
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Michel Cayouette @michelcayouette.bsky.social · 22/10/2025
You are a postdoc looking for an opportunity to present your latest work and discuss with leaders in the field? Apply to the early career scientists seminar series @ircm.bsky.social ! If selected, we pay for your expenses to come spend a day with us and give a seminar! www.ircm.qc.ca/en/news-deta...
ircm.qc.ca
Call for applications: A fifth edition for the Early-Career Scientist Seminar Series
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Christophe 🔬 Leterrier @christlet.bsky.social · 02/10/2025
Nanotubes everywhere between neurons! A bit skeptical about these "dendrite-dendrite nanotubes" from a phalloidin staining in culture, but let's read on… www.science.org/doi/10.1126/...
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Hao Yin @haoyin.bsky.social · 02/10/2025
Giotto Suite: a multiscale and technology-agnostic spatial multiomics analysis ecosystem giottosuite.com Multi-slice/-modal registration Joint cell type annotation⬅️ multiple segmentation Integrated modalities-based Leiden clustering @natmethods.nature.com 2025 www.nature.com/articles/s41...
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Christian Frezza @frezzalab.bsky.social · 21/09/2025
Good Sunday, all. This week has seen some beautiful papers in #cancermetabolism and #mitochondrialbiology. Don't miss the curated summary, find it here: biomed.news/bims-camemi/... @biomednews.bsky.social #keepreading 💥 📚 "The real meditation is how you live your life."-Jon Kabat-Zinn
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 29/07/2025
1/Patient-derived xenografts (PDXs) are used in preclinical testing of cancer therapies, including metabolic therapies. We determined which metabolic properties are retained, and which are lost, when melanomas from patients are implanted and passaged as PDXs in mice. www.nature.com/articles/s42...
nature.com
Conservation and divergence of metabolic phenotypes between patient tumours and matched xenografts - Nature Metabolism
Rao and Cai et al. perform a detailed metabolic comparison between primary tumours from patients and their matching xenografts, which identify conserved as well as divergent metabolic patterns.
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 08/07/2025
Thanks Nature Cancer for the chance to reflect on some factors that led me to study cancer metabolism. For the trainees and other young scientists: the critical events that shape your career might not be obvious while they are happening. Keep an open mind and trust your instincts. rdcu.be/evi4I
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An unexpected career in cancer metabolism
Nature Cancer - Ralph DeBerardinis obtained an MD and PhD from the University of Pennsylvania, then trained in Pediatrics and Medical Genetics at Children’s Hospital of Philadelphia. He moved...
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Mingqi Han @mingqihan.bsky.social · 07/07/2025
Excited to share that I'm joining the Cancer Systems Imaging (CSI) @mdanderson.bsky.social as Assistant Professor this July! My lab focus on cancer metabolism and quantitative imaging. We're looking for a highly motivated postdoc to explore "metabolism visualization" across scales!
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Christian Frezza @frezzalab.bsky.social · 21/05/2025
Unravelling cysteine-deficiency-associated rapid weight loss www.nature.com/articles/s41...
nature.com
Unravelling cysteine-deficiency-associated rapid weight loss - Nature
Conditional cysteine restriction in mice causes substantial weight loss, exceeding that seen with essential amino acid restriction, by activating the integrated stress and oxidative stress respon...
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Gina DeNicola @ginadenicola.bsky.social · 21/05/2025
Great work by @rushika-perera.bsky.social!
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Muir Lab @muirlab.bsky.social · 21/04/2025
Excited to share new report from collaborative work from @delgoffelab.bsky.social and @patrickjonker.bsky.social from our team on a novel metabolic suppressor of T cell function in tumors! rdcu.be/eiyIa 1/
rdcu.be
Tumour interstitial fluid-enriched phosphoethanolamine suppresses T cell function
Nature Cell Biology - Wang, Wilfahrt and colleagues show that phosphoethanolamine, a phospholipid intermediate, is enriched in tumour interstitial fluid and induces T cell dysfunction, in part by...
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Brandon Chen, PhD @brandontwchen.bsky.social · 17/04/2025
Happy to share our most recent review on mitochondria-organelle metabolic communication with Yatrik Shah and Costas Lyssiotis now online at Molecular Cell! We explored aspect of lipid transfer, organelle membrane contacts, ROS, metabolites, and metals! www.sciencedirect.com/science/arti...
sciencedirect.com
Mitochondria-organelle crosstalk in establishing compartmentalized metabolic homeostasis
Mitochondria serve as central hubs in cellular metabolism by sensing, integrating, and responding to metabolic demands. This integrative function is a…
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Natalie Niemi @nieminm.bsky.social · 31/03/2025
Abstract deadline for UMDF 2025 is TODAY! Submit your abstracts here: umdf.smapply.org/prog/2025pos...
umdf.smapply.org
2025 Conference Poster Abstract Program - UMDF Online Portal
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Makoto T Hayashi @makotothayashi.bsky.social · 17/03/2025
🧵 1/10 Excited to share our latest study in @naturecomms.bsky.social "A CPC-shelterin-BTR axis regulates mitotic telomere deprotection" t.co/VypPsLBJCR
rdcu.be
A CPC-shelterin-BTR axis regulates mitotic telomere deprotection
Nature Communications - Here the authors reveal how telomeres signal mitotic stress. A key protein network alters their structure exposing telomere ends to signal mitotic stress, ultimately...
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 15/03/2025
1/Happy to share a new paper reporting a metabolic approach to radiosensitization in lung cancer, from Rachel Chiang, Faith Zhang and colleagues at UT Southwestern Radiation Oncology and @cri-utsw.bsky.social www.science.org/doi/10.1126/...
science.org
Lipoylation inhibition enhances radiation control of lung cancer by suppressing homologous recombination DNA damage repair
Genetic screen finds lipoylation as a target to improve radiation success in lung cancer by blocking DNA damage repair.
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Gina DeNicola @ginadenicola.bsky.social · 11/03/2025
Fascinating work from MALDI master Ramon Sun and collaborators on glycogen metabolism in NSCLC. A real tour de force and such beautiful images 😍 www.nature.com/articles/s42...
nature.com
Glycogen drives tumour initiation and progression in lung adenocarcinoma - Nature Metabolism
Clarke, Hawkinson and colleagues study the contribution of glycogen accumulation in the onset and progression of lung cancer.
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Jonathan Kagan @jkagan1.bsky.social · 06/03/2025
Increasing evidence for the central role of peroxisomes in antiviral immunity. A new study provides in vivo evidence to support a role for peroxisomes in SARS-COV-2 infection. Kudos to the authors on this important study. www.science.org/doi/10.1126/...
science.org
Macrophage peroxisomes guide alveolar regeneration and limit SARS-CoV-2 tissue sequelae
Peroxisomes are vital but often overlooked metabolic organelles. We found that excessive interferon signaling remodeled macrophage peroxisomes. This loss of peroxisomes impaired inflammation resolution and lung repair during severe respiratory viral ...
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Ricardo D. Righetto @lifeonthewedge.bsky.social · 28/02/2025
To all #TeamTomo #CryoET and #Chlamydomonas aficionados: we have updated EMPIAR-11830 with a bug fix concerning some cryo-CARE denoised tomos as well as additional files and metadata! 🎉👩🏽‍💻 www.ebi.ac.uk/empiar/EMPIA... A little thread about what's new... 🧵 1/n
Rare cellular events observed in the cryo-ET dataset. Slices through tomograms (left) with corresponding 3D segmentation (middle and right). Right panels show enlarged views of the boxed regions in the middle panels. A) Mitochondrion at the plasma membrane, tethered to microtubules by thin filaments of unknown identity. Segmented classes: nuclear envelope (light blue), nuclear pore complex (dark blue), 80S ribosomes (orange), mitochondrial membranes (dark red), ATP synthase (royal blue), plasma membranes (grey), microtubules (pink), filaments (yellow), endoplasmic reticulum (purple). Zoomed-in panel shows thin filaments running between microtubules and the mitochondrion at the plasma membrane. Note that this tomogram contains two closely appressed cells, and thus, two plasma membranes with cell walls between. B) Mitochondrial fission event with ER membrane interactions. Segmented classes: mitochondrial membranes (dark red), ATP synthase (royal blue), 80S ribosomes (orange), thylakoid membranes (green), PSII (bright yellow), cell wall (grey), ER (purple), fission site containing filamentous structures perpendicular to the mitochondrial long axis (pale yellow). C) Ciliary transition zone between basal body and axoneme, including assembling IFT train and stellate structure77. Segmented classes: microtubule doublets (light blue), central microtubule pair (light green), stellate structure (pale red), IFT train (yellow). D) Pyrenoid tubule extending from the thylakoids into the phase-separated Rubisco matrix of the pyrenoid. Minitubules originate from thylakoid membranes82. Segmented classes: thylakoid membranes (dark green), PSII (yellow), pyrenoid tubule (lime green), Rubisco (lavender blue), minitubules (orange). Scale bars in A-D: 100 nm. Related to Fig. 2C-H.
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Bart Deplancke @bartdeplancke.bsky.social · 28/02/2025
#scRNAseq to the next level: www.biorxiv.org/content/bior.... Mindbogglingly 100M cell large dataset involving 50 cancer cell lines and 1,100 molecule perturbations 🤩 — an absolute feast for the data-hungry ML/AI field, poised to advance cell understanding and modeling.
biorxiv.org
Tahoe-100M: A Giga-Scale Single-Cell Perturbation Atlas for Context-Dependent Gene Function and Cellular Modeling
Building predictive models of the cell requires systematically mapping how perturbations reshape each cell’s state, function, and behavior. Here, we present Tahoe-100M , a giga-scale single-cell atlas...
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Blake Wilde @brwilde.bsky.social · 28/02/2025
📢 Postdoc Opening – Metabolism & Cancer! 📢 Looking for a motivated postdoc to explore how metabolism regulates tumor initiation at Roswell Park in Buffalo, NY! Join us to tackle big questions with cool science in a collaborative environment. Interested? DM me! #PostdocJobs #CancerMetabolism
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DeBerardinis Lab at UT Southwestern Medical Center @rjdlab.bsky.social · 17/02/2025
1/I am delighted to share a new Cancer Discovery paper about metabolism and clinical outcomes in patients with non-small cell lung cancer (NSCLC). From Ling Cai and Brandon @faubert.bsky.social, @cri-utsw.bsky.social and UT Southwestern McDermott Center.
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Christian Frezza @frezzalab.bsky.social · 09/02/2025
Retrograde mitochondrial signaling governs the identity and maturity of metabolic tissues | Science www.science.org/doi/10.1126/...
science.org
Retrograde mitochondrial signaling governs the identity and maturity of metabolic tissues
Mitochondrial damage is a hallmark of metabolic diseases, including diabetes, yet the consequences of compromised mitochondria in metabolic tissues are often unclear. Here, we report that dysfunctiona...
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Peter Mullen @petemullen.bsky.social · 03/02/2025
Registration and abstract submissions are open for the Third Annual SoCal Metabolism Symposium at USC. Go to gero.usc.edu/event/third-... The abstract and early bird price deadlines are Feb 28th
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