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Lila Allou

@lilaallou.bsky.social
274 followers 251 following 13 posts

Research Group Leader @MRC_LMS @imperialcollege

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Reposted by Lila Allou
Helena Cocheme @cochemelab.bsky.social · 30/09/2026
✨Excited to share our latest paper in Aging Cell!✨ "Direct Pharmacological Activation of AMPK Extends Lifespan in Yeast, Worms and Flies" Thanks to all the collaborators who made this multi-organism study possible! 💊🪱🪰🐁⏳ #TeamScience #Drosophila #C.elegans #S.pombe #Ageing doi.org/10.1111/acel...
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Hannah Long @hannahlong.bsky.social · 08/09/2026
📣 Interested in non-coding disease-causing variants? Check out our review "Mechanisms underlying disease-causing variants in promoters and enhancers". Interesting mechanisms, challenges and future perspectives. Great to work with @wbickmor.bsky.social, Kun and Ryan! www.nature.com/articles/s41...
nature.com
Mechanisms underlying disease-causing variants in promoters and enhancers - Nature Genetics
This Review discusses how rare-disease-causing variants in the noncoding genome impact gene regulation, why these examples are so few and how new approaches could accelerate discovery of noncoding var...
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Max Planck Institute of Immunobiology and Epigenetics @mpi-ie.bsky.social · 07/09/2026
🌟 Women Shaping #STEM: Stories, Careers, Conversations 🌟 Join us for an inspiring talk by @julianeg.bsky.social, MPI-IE Group Leader, as she shares the personal story behind her career. 📅 Wed, Sept 16 | 11-12 AM 📍 Lecture Hall, MPI-IE, Freiburg Register via @cibss.bsky.social: s.gwdg.de/iMivMZ
Flyer for a seminar series titled 'Women Shaping STEM' featuring a smiling woman in a black sleeveless top against a green background and event details.
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Reposted by Lila Allou
Rada-Iglesias Lab @radaiglesiaslab.bsky.social · 01/09/2026
Have you ever wondered why developmental genes are often regulated by enhancers located at long distances? In this @natgenet.nature.com perspective, we speculate that long-range enhancer positioning may provide regulatory properties essential for proper gene expression www.nature.com/articles/s41...
nature.com
Mechanisms and functional implications of long-range enhancer-dependent gene regulation - Nature Genetics
Development depends on gene regulation by enhancers across long genomic distances. This Perspective discusses mechanisms enabling long-range enhancer–promoter communication and the potential advantage...
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Reposted by Lila Allou
Evgeny Kvon @evgenykvon.bsky.social · 25/08/2026
First synthetic mouse enhancers active in defined embryonic tissues! Great collaboration led by @alex-stark.bsky.social lab now at @natgenet.nature.com
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Reposted by Lila Allou
Tobias Warnecke @tobiaswarnecke.bsky.social · 22/08/2026
Who needs chromatin anyway...? NOT THIS GUY! www.biorxiv.org/content/10.6... 1/n
biorxiv.org
Chromatin is dispensable for bacterial life
Inside cells, DNA is intimately associated with proteins, forming chromatin. The protein constituents of chromatin vary across the tree of life: histones are the principal building blocks of chromatin...
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Reposted by Lila Allou
Bjørt K.Kragesteen @kragesteen-lab.bsky.social · 12/08/2026
📢Job alert! 👩🏽‍💻🧑🏼‍💻 @amandaanderssonr.bsky.social and I are hiring a computational scientist to work on sc/spatial data 🧬🧫 organ development and oxygen homeostasis 📍Karolinska Institute, Stockholm ⏰ 1 year-with potential for permanent contract Apply by 15th Sept👇🏼 ki.varbi.com/what:job/job...
ki.varbi.com
Computational Staff Scientist - shared between 2 labs - in spatial and single cell omics
Do you want to contribute to top quality medical research? Come and join the Andersson & Kragesteen labs at the department of Medical Biochemistry and Biophysics (MBB) at Karolinska Institutet/Bio
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Mikhail Spivakov @mspivakov.bsky.social · 25/11/2025
I'm guest-editing a collection on "Enhancer-promoter interactions" at Genome Biology. Please send us your exciting stories! link.springer.com/collections/...
link.springer.com
Enhancer-promoter interactions
Genome Biology is calling for submissions to our Collection on enhancer-promoter interactions. Enhancer–promoter interactions are central to the regulation ...
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Reposted by Lila Allou
Mikhail Spivakov @mspivakov.bsky.social · 04/08/2026
Very happy to see this story finally out (link in comments)! We used low-input Capture Hi-C to profile promoter-anchored chromosomal interactions in Type 3 innate lymphoid cells (ILC3s) - rare tissue-resident lymphocytes that lack antigen receptors and regulate barrier immunity.
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Reposted by Lila Allou
Niakan Lab @niakanlab.bsky.social · 04/08/2026
We have a postdoc position available in the lab and would like to spread the word. Please apply if you are interested! www.cam.ac.uk/jobs/researc...
cam.ac.uk
Research Associate (Fixed Term)
We seek a highly motivated Postdoctoral Research Associate to join the laboratory of Professor Kathy Niakan. We are based in the Loke Centre for Trophoblast Research (LCTR), in the Department of Physi...
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Reposted by Lila Allou
Alexis Barr @alexisbarr.bsky.social · 30/07/2026
Through a fantastic collaboration with @mariasecrier.bsky.social we show how dormant breast cancer cells occupy protected niches, presenting a therapeutic challenge. Congratulations to @cenkcelik.bsky.social for a super study
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Sarah Vergult @svergult.bsky.social · 27/07/2026
40 individuals with the clinical picture of FOXG1 syndrome and a completely intact FOXG1 gene. So what’s going wrong then? Our new paper in @natcomms.nature.com traces the answer to a stretch of non-coding DNA 665 kb away from the gene. (1/7)
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Darío Lupiáñez @dariloops.bsky.social · 21/07/2026
🚨 Job Alert - Please share 🙏 Interested in 3D gene regulation in development & evolution? 🤓🧬 💥 Our lab at @cabd-upo-csic.bsky.social is expanding! ✅ 4 years fully funded PhD position 💻🧪 Experimental or computational backgrounds welcome 👇 Details below #PhDPosition #PhDOpportunity #AcademicJobs
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Vicki Metzis @vmetzis.bsky.social · 17/07/2026
How does an embryo generate the right cells in the right place? Delighted to share our latest findings on how neural crest cells acquire vagal or trunk identities Spoiler alert: The timing & combination of CDXs preconfigures cell identity & distinct HOX states www.biorxiv.org/content/10.6...
biorxiv.org
Temporally distinct CDX programmes preconfigure vagal and trunk neural crest
Neural crest cells (NCCs) are progenitor cells vital in establishing the head, heart, gut and peripheral nervous system of vertebrate embryos. Disruptions to NCC development underlie neurocristopathie...
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Reposted by Lila Allou
James Briscoe @jamesbriscoe.bsky.social · 15/07/2026
New from @vmetzis.bsky.social & co Vagal & trunk neural crest cells share transient epiblast origin, but temporal regionalisation preconfigures their identity before crest induction Cdx1 acts before Cdx2, setting distinct chromatin and HOX state in the epiblast www.biorxiv.org/content/10.6...
biorxiv.org
Temporally distinct CDX programmes preconfigure vagal and trunk neural crest
Neural crest cells (NCCs) are progenitor cells vital in establishing the head, heart, gut and peripheral nervous system of vertebrate embryos. Disruptions to NCC development underlie neurocristopathie...
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Reposted by Lila Allou
Matthew L. Kraushar @matthewkraushar.bsky.social · 16/06/2026
Let's step inside a neuron together, and ask, "how did all this get here?" 🤔 In this review, I trace the history and transformations of a neuron's molecules, pay homage to major discoveries in brain development ... and make a call to action for neuroscience. www.annualreviews.org/content/jour...
annualreviews.org
The Translation of Genetic Information in Neurodevelopment
Neurodevelopment is the transformation of genetic information into diverse neuronal phenotypes. Developmental signals initiate patterns of gene transcription and translation that drive progenitors tow...
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Reposted by Lila Allou
Alexis Barr @alexisbarr.bsky.social · 09/06/2026
Our fantastic PhD student, Ellie Robinson, wrote this in-depth review on phosphatases in quiescence entry, maintenance & exit. "This is an important & timely review for the field" Reviewer 1 😍 First of many articles to come from Ellie! @mrc-lms.bsky.social @imperialcollegeldn.bsky.social
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Reposted by Lila Allou
Ferenc Mueller @ferencmueller.bsky.social · 01/06/2026
Join is in Budapest in October! For the 6th time, all things epigenetics, gene and genome regulation and more. A fantastic opportunity to present, to talk to speakers and colleagues in a friendly, informal setting at a great location. Please note, travel grant deadline will expire soon.
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Reposted by Lila Allou
Alexis Barr @alexisbarr.bsky.social · 21/05/2026
We're looking for a new Roving Research @mrc-lms.bsky.social A unique post for those who love research, learning new techniques & working across different teams. Must be a great communicator & well organised! Apply by 21 June: fa-evzn-saasfaukgovprod1.fa.ocs.oraclecloud.com/hcmUI/Candid...
fa-evzn-saasfaukgovprod1.fa.ocs.oraclecloud.com
Investigator Scientist Roving Researcher
Investigator Scientist (Roving Researcher) (LMS 2369) Salary £42,159 – 44,801 plus London Allowance (£5,560) per annum | 2 years fixed term | Full time | Closing Date: 21 June
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Alexis Barr @alexisbarr.bsky.social · 29/04/2026
Excellent opportunity @mrc-lms.bsky.social for a human physiologist to start their own group. Deadline 4th May. Core funding, excellent package. Please repost! lms.mrc.ac.uk/work/vacanci...
lms.mrc.ac.uk
Programme Leader Track - MRC Laboratory of Medical Sciences
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Reposted by Lila Allou
Daniel MK Lee @dannimklee.bsky.social · 24/04/2026
New Preprint alert!🚨 Super excited to share my postdoc work now on BioRxiv. How does PRC2 loss lead to developmental failures? We combined rapid protein degradation with TLS embryoid models to uncover temporal and lineage-specific dependencies 🧬. Preprint: doi.org/10.64898/2026.04.18.719361
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Reposted by Lila Allou
MRC Laboratory of Medical Sciences @mrc-lms.bsky.social · 16/04/2026
A new study shows how different regulatory genetic elements control when a key developmental gene is active in the body. The findings could explain subtle differences seen in patients with congenital limb malformations, for which the underlying disease mechanisms often remain unknown.
lms.mrc.ac.uk
Waves of regulation control an important developmental gene
In a new study published in Genes & Development, research led by Dr Lila Allou at the MRC Laboratory of Medical Sciences (LMS) in London and Professor Stefan Mundlos at the Max Planck Institute for Mo...
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Reposted by Lila Allou
MRC Laboratory of Medical Sciences @mrc-lms.bsky.social · 05/02/2026
Congratulations Matthias Merkenschlager, lead PI Daniel Panne @uniofleicester.bsky.social & Benjamin Rowland @nkinl.bsky.social on their Wellcome Discovery Award! They'll work across scales from the atomic to the organismal to learn how cohesin organises genomic processes central to human disease.
lms.mrc.ac.uk
Professor Matthias Merkenschlager and collaborators receive Wellcome Discovery Award
Professor Matthias Merkenschlager, Head of the Lymphocyte Development Group at the MRC Laboratory of Medical Sciences (LMS), has been awarded a Wellcome Discovery Award as co-Principal Investigator wi...
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Reposted by Lila Allou
Aydan Bulut-Karslioglu @bulutkarslioglu.bsky.social · 26/01/2026
We wrote a protocol article detailing induction of dormancy in stem cells, embryos, and blastoids. We hope that it is useful to the community. As usual fun to work with @nicolasrivron.bsky.social, Heidar and Dhanur.
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Reposted by Lila Allou
Greg Findlay @gregfindlay.bsky.social · 24/01/2026
Our latest story is now on bioRxiv. We present PETRA, a new method for deciphering how sequence variants impact gene regulation at scale. www.biorxiv.org/content/10.1... This work was led by Magdalena Armas Reyes, a @crick.ac.uk PhD student until very recently. Congrats, Dr. Armas! 🧵 1/9
biorxiv.org
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Alexis Barr @alexisbarr.bsky.social · 23/01/2026
We are also recruiting a Postdoc in cell/molecular biology! 3yr, fully funded by @cancerresearchuk.org more details here: news.cancerresearchuk.org/2025/11/27/s... Apply here: www.imperial.ac.uk/jobs/search-...
news.cancerresearchuk.org
Spin doctors: taking on the challenge of tissue-specific cell cycle control - Cancer Research UK - Cancer News
A false start, a Nobel Prize and renewed hope – understanding cell cycle disruption over different tissues is complex. But we are getting there…
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Reposted by Lila Allou
Alexis Barr @alexisbarr.bsky.social · 21/01/2026
We are recruiting a Postdoc in computational biology, together with @mariasecrier.bsky.social 4yr, fully funded by @cancerresearchuk.org, ideal for Postdocs wanting to develop their independence Applications open now: www.imperial.ac.uk/jobs/search-...
imperial.ac.uk
Description
Please note that job descriptions are not exhaustive, and you may be asked to take on additional duties that align with the key responsibilities ment...
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Reposted by Lila Allou
Martin Franke @martinfranke.bsky.social · 12/01/2026
🧬 We’re #Hiring a #Bioinformatician/ Computational Biologist! #Single-cell genomics, #Epigenomics & #3Dgenome biology in #Zebrafish #DevBio 🐟 📍 @cabd-upo-csic.bsky.social, CABD, Seville (Spain) 🕒 Full-time, 3-year position (start March 2026) 📅 Apply by Feb 15, 2026 👉 drive.google.com/file/d/1M8rp...
drive.google.com
Job offer 2026.pdf
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Guillaume Andrey @guandrey.bsky.social · 12/01/2026
Our work on #RegulatoryTrajectories is out today in Nat. Comms: www.nature.com/articles/s41... Led by @raquelrouco.bsky.social, this study establishes a new framework to study how enhancer landscapes act sequentially at developmental loci and are silenced to shape gene expression patterns. (1/n)
nature.com
Client Challenge
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British Society for Developmental Biology @bsdb.bsky.social · 09/01/2026
Don't forget to register for our upcoming Spring Meeting: 'Molecules to Morphogenesis' Get your abstracts submitted by the 16th of January! bsdb.org/meetings
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Amanda Andersson-Rolf @amandaanderssonr.bsky.social · 03/01/2026
We are hiring! Looking for curious and motivated new colleagues to join my lab at the Karolinska Institute @ki.se. If you are interested in studying cell identity and pancreas biology using human organoids, (spatial)omics genome and bioengineering please reach out! #hiring #sciencejob #STEMJobs
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Ben Lehner @benlehner.bsky.social · 01/01/2026
Looking to start your lab in generative biology / AI? Come join us at the @sangerinstitute.bsky.social Sanger is core-funded so you can generate data at scale to train the next generation of models and understanding. Design/Engineering/Chemistry/Proteins/Pathways! pls RT tinyurl.com/GenGenFaculty
tinyurl.com
Group Leader - Generative Biology and AI
Do you want to help us improve human health and understand life on Earth? Make your mark by shaping the future to enable or deliver life-changing science to solve some of humanity’s greatest challenge...
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Alex Stark @alex-stark.bsky.social · 30/12/2025
Activator-promoter compatibility in mammals - Hcfc1 is a key and intrinsically CGI-promoter-specific co-activator that cannot activate non-CGI promoters. Lead by @nemcko.bsky.social & Kevin Sabath in collab. with @plaschkalab.bsky.social @impvienna.bsky.social www.biorxiv.org/content/10.6... (1/2)
biorxiv.org
Activator-promoter compatibility in mammals: a CpG-Island-specific co-activator directly bridges transcription factors to TFIID
Transcription from CpG island (CGI) promoters controls the expression of two-thirds of mammalian genes, yet despite their prevalence, it remains unknown whether CGI-specific co-activators with intrins...
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Benoit Bruneau @benoitbruneau.bsky.social · 29/12/2025
Helping this mood is our latest now out in its final form! @irfankathiriya.bsky.social leading the teams with me. Thanks to the editors and reviewers (incl. @wythelab.bsky.social)for a pleasant and productive journey. More to come when the full issue is out. www.nature.com/articles/s44...
nature.com
A disrupted compartment boundary underlies abnormal cardiac patterning and congenital heart defects - Nature Cardiovascular Research
Kathiriya et al. identify a cardiac progenitor lineage with expression of Tbx5 and anterior heart field-specific expression of Mef2c that bisects the intraventricular septum during development and sho...
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Microbes.Info @microbesinfo.bsky.social · 22/12/2025
Ancient #viral #DNA shaped early #embryonic development ... | #virus | #TransposableElements | #genome | #infection | By @mrc-lms.bsky.social via @sciencex.bsky.social
phys.org
How ancient viral DNA shapes early embryonic development
A new study from the MRC Laboratory of Medical Sciences (LMS) in London, UK reveals how ancient viral DNA once written off as "junk" plays a crucial role in the earliest moments of life. The…
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Alex Stark @alex-stark.bsky.social · 24/12/2025
Our preprint "Predictive design of tissue-specific mammalian enhancers that function in vivo in the mouse embryo" is on bioRxiv: www.biorxiv.org/content/10.6... . Amazing collaboration by @shenzhichen1999.bsky.social, Vincent Loubiere (@impvienna.bsky.social,@viennabiocenter.bsky.social),... (1/2)
biorxiv.org
Predictive design of tissue-specific mammalian enhancers that function in vivo in the mouse embryo
Enhancers control tissue-specific gene expression across metazoans. Although deep learning has enabled enhancer prediction and design in mammalian cell lines and invertebrate systems, it remains uncle...
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Michelle Percharde @mpercharde.bsky.social · 22/12/2025
🚨Our story is published! Same bones but + dissection of MERVL’s role integrating signals from #ZGA factors, & + about pathological DUX4 activation of NOXA #TEsky. Thanks to all revs for their helpful comments improving the ms. Even #rev3 - until they ghosted us 😜 www.science.org/doi/epdf/10....
science.org
CRISPRa-mediated disentanglement of the Dux-MERVL axis in the 2C-like state, totipotency, and cell death
You have to enable JavaScript in your browser's settings in order to use the eReader.
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Christian Speck @speck-lab.bsky.social · 18/12/2025
We are recruiting a PhD student to tackle a fundamental question in cancer biology: how DNA replication fails at centromeres and drives chromosomal instability (CIN) — a major driver of tumour evolution and therapy resistance. tiny.cc/vilw001 #PhD #CancerResearch #GenomeStability #Chromatin
findaphd.com
PhD Studentship: Understanding How Centromere Replication Fails in Cancer Imperial College London & The Institute of Cancer Research (CRUK Convergence Science Centre) at Institute of Cancer Research o...
PhD Project - PhD Studentship: Understanding How Centromere Replication Fails in Cancer Imperial College London & The Institute of Cancer Research (CRUK Convergence Science Centre) at Institute of...
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Naomi Moris @nmoris.bsky.social · 16/12/2025
Lovely little pre-Christmas present to see this out @natcellbio.nature.com! Some 🔥 new results in here since the biorvix incl (1) a new RARE-GFP reporter ✳️🙌, (2) additional NMP quantification 🔢, (3) no neural tube patterning on RA inhibition 🙅 etc. Enjoy! 😍 www.nature.com/articles/s41...
nature.com
Modelling co-development between the somites and neural tube in human trunk-like structures - Nature Cell Biology
Makwana, Tilley et al. generate human stem cell-based trunk-like structures approximating Carnegie stage 13–14 of development. They use them to model and study the development of the thoracic and lumbar trunk.
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Alexis Barr @alexisbarr.bsky.social · 03/12/2025
New lab preprint! We find that Wee1 phosphorylates Cdh1(FZR1) and suppresses APC/C(Cdh1) activity to promote S-phase entry A fantastic team effort from the combined forces of @lavuillemenot.bsky.social, Lucas Morales, Calin-Mihai Dragoi & Beth Pennycook www.biorxiv.org/cgi/content/...
biorxiv.org
Wee1 opposes APC/C(Cdh1) activity to promote S-phase entry
Wee1 phosphorylates and inhibits CDK activity to inhibit mitotic entry and establish a G2 DNA damage checkpoint. Consequently, Wee1 inhibitors are in clinical trials, developed to be synthetically let...
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James Briscoe @jamesbriscoe.bsky.social · 03/12/2025
Applications are open for @dev-journal.bsky.social 2026 Pathway to Independence (PI) programme, supporting postdocs applying for group leader positions: Mentoring Profile raising Leadership training Network building Spread the word... www.biologists.com/grants/devel...
biologists.com
Development's Pathway to Independence Programme
Our grants support and encourage the sharing of knowledge throughout the community by facilitating international collaboration, event attendance and the organisation of scientific meetings, conference...
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MRC Laboratory of Medical Sciences @mrc-lms.bsky.social · 02/12/2025
Congratulations to LMS group head @mpercharde.bsky.social who has been selected as one of this year’s EMBO Young Investigators! 🌟 The prestigious EMBO Young Investigator Programme supports exceptionally talented life scientists who represent innovation and excellence in their fields. @embo.org
lms.mrc.ac.uk
LMS group head Michelle Percharde joins EMBO Young Investigator Programme
We’re delighted to announce that Michelle Percharde, Head of the Chromatin & Development Group at the MRC Laboratory of Medical Sciences (LMS) has been selected as one of this year’s EMBO Young Invest...
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Max Planck Institute for Molecular Genetics @molgen.mpg.de · 27/11/2025
Want to analyze the role of endogenous retroviruses in early human development or investigate their regulation in pluripotency and early development for your PhD? Join the lab of @fueyoraquel.bsky.social via the IMPRS-BAC #gradschool! 👉 www.molgen.mpg.de/5094682/Fuey...
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Bryony Leeke @bryonyleeke.bsky.social · 27/11/2025
Join @mpercharde.bsky.social Lab at the MRC LMS! We have an 18mo postdoc position to cover a couple of projects (maternity leave and paper revisions). The projects are focussed on chromatin in early mouse embryos and metabolism in mouse embryonic stem cells and pluripotency.
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Michelle Percharde @mpercharde.bsky.social · 27/11/2025
🚨Post open in our lab! Come work on some cool themes involving metabolism, chromatin, early development 🤓. Pls RT
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EMBO @embo.org · 25/11/2025
Register now for the EMBO Workshop "Limb development and regeneration: Quantitative, ecological, and diversification studies" in #Tokyo, Japan, 23–27 March 2026. Abstract submission/Registration deadline: 12/15 December 2025 meetings.embo.org/event/26-limb-dev #EMBOLimbDev #EMBOevents 🧪
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MRC Laboratory of Medical Sciences @mrc-lms.bsky.social · 20/11/2025
📣 We’re hiring 6 new Team Science postdocs! Our Team Science approach brings together interdisciplinary researchers to tackle questions no single field can solve alone. Find out more and download our brochure below
lms.mrc.ac.uk
MRC Postdoctoral Research Scientists x 6 - MRC Laboratory of Medical Sciences
Team Science Project
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Joaquina Delas @joadelas.bsky.social · 18/11/2025
It's always special when you find your own paper in the table of contents of the journal 😍 "The cis-regulatory logic integrating spatial and temporal patterning in the vertebrate neural tube" -> Now out in its final form www.cell.com/developmenta...
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Matthew L. Kraushar @matthewkraushar.bsky.social · 18/11/2025
check out my journal club on the seminal discovery of local translation in neurons (Kang & Schuman. 1996), and more recently, its activity in neocortex neurodevelopment (Pilaz...Silver. 2023). cheers to the @erin-schuman.bsky.social & @debbysilver.bsky.social labs! www.nature.com/articles/s41...
nature.com
The on-site, on-demand, neuronal gene machine - Nature Reviews Neuroscience
In this Journal Club, Matthew Kraushar discusses a study published in 1996 that found a role for local protein translation in hippocampal synaptic plasticity.
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Tien-Chi Huang @tienchihuang.bsky.social · 18/11/2025
Happy to share our latest preprint. We uncover a previously uncharacterised and evolutionarily conserved chromatin architecture in premeiotic gonadal germ cells, revealed through integrated cytological and high-resolution Hi-C approaches. www.biorxiv.org/content/10.1... Thread🧵🔽
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