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König Lab

@koenig-lab.bsky.social
587 followers 498 following 31 posts

RNA Biology group at Würzburg University (@uni-wue). Previously at IMB in Mainz. We work on #RNAmodifications #splicing #decay #translation #RBP #iClip

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Helmholtz Institute Würzburg @helmholtz-hiri.bsky.social · 18/09/2026
⏰ Reminder: The deadline is on Monday! Apply by September 21 for one of two junior professorships. Learn more in the thread below. 🧵👇
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Genes & Development @genesdev.bsky.social · 18/09/2026
We are saddened by the loss of G&D's long-time Editor, Terri Grodzicker. When Terri stepped down as Editor in 2022, friends and colleagues wrote about her contributions to the research community. We are re-visiting these pieces, and thinking of her. ➡️ genesdev.cshlp.org/content/37/1-2.t…
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SchmitzStreitsLAB @schmitzstreitslab.bsky.social · 18/09/2026
Today in CellCellPress 🥂collaborating across 3 continents to study how organisms at the extremes use RNA modifications, discovered the first natural modification of the RNA backbone, phosphorothioates and their writers. @SchragaSchwartz & several archaeal labs-thanks for being part of the team !
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RNA modification papers @rnamod.bsky.social · 18/09/2026
RNA demethylase FTO uses conserved aromatic residues to recognize the mRNA 5' cap and promote efficient m6Am demethylation The Journal of biological chemistry · Shimanski et al. doi.org/10.1016/j.jbc.2026.113573 #RNAsky #RNAmods
doi.org
RNA demethylase FTO uses conserved aromatic residues to recognize the mRNA 5' cap and promote efficient m6Am demethylation
Here we utilize molecular dynamics simulations of FTO-RNA cap complexes to identify conserved aromatic residues on the surface of FTO involved in 5' cap recognition.
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RNA modification papers @rnamod.bsky.social · 18/09/2026
Transcript-wide m6A methylation defines the efficiency of cap-independent translation initiation RNA (New York, N.Y.) · Smolin et al. doi.org/10.1261/rna.081017.126 #RNAsky #RNAmods
doi.org
Transcript-wide m6A methylation defines the efficiency of cap-independent translation initiation
Here, we combined ribosome profiling under conditions of mTOR inhibition and m⁶A mapping to identify distinct subsets of mRNAs that differ in their sensitivity to the suppression of cap-dependent initiation.
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EMBL-EBI @ebi.embl.org · 17/09/2026
Closing the loop for reproducible science: 🧬 Data ➔ 🤖 Models ➔ 📏 Benchmarks As AI transforms biology, EMBL-EBI is building the infrastructure to ensure models are as rigorous as the data behind them. What’s your biggest challenge when validating AI models? www.embl.org/news/science...
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Deutsche Forschungsgemeinschaft @dfg.de · 17/09/2026
Erste Förderentscheidungen für #GlobalMinds 🌍 in DFG-Forschungsverbünden: Im Rahmen des 1000-Köpfe-plus-Programms des #BMFTR werden 27 Wissenschaftler*innen aus dem Ausland (USA, Europa, Afrika, Asien) an 18 Standorten in Deutschland tätig. Gesamtvolumen 69 Mio. Euro. Einzelheiten ▶️ sohub.io/zezs
Dunkelbraue Tafel mit weißer Schrift und grünen Highlights, ein Icon, dass Personen andeutet und die folgende Überschrift:
Die DFG fördert 15 Professuren und 12  Mercator Fellows im 1000-Köpfe-plus-Programm
Darunter ein Zitat von DFG-Präsidentin Prof. Dr. Katja Becker:
„Die Initiative stärkt somit auch unsere international hoch angesehenen Koordinierten Programme. [...] Dass die Geförderten aus insgesamt zwölf verschiedenen Herkunftsländern auf vier Kontinenten kommen, unterstreicht zudem die globale Reichweite des Programms.“

Unten die beiden Logos von DFG und dem 1000-Köpfe-plus-Programm
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Anke Sparmann @ankesparmann.bsky.social · 16/09/2026
As AI becomes more embedded in research, transparency and reproducibility matter more than ever. A timely editorial in Patterns: www.cell.com/patterns/ful...
cell.com
Don’t black box your research
As generative AI tools become routine parts of research, the journal has growing concerns about how this transformation will affect the reproducibility of research. We call upon our authors to take st...
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Helmholtz Institute Würzburg @helmholtz-hiri.bsky.social · 16/09/2026
🚨 Last chance to apply for the @rnamed.bsky.social graduate program! 🧬 🗓️ Applications close tomorrow, so don’t miss out: www.uni-wuerzburg.de/en/imib/rnam...
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Science Magazine @science.org · 16/09/2026
OpenAI’s claimed Navier-Stokes solution has polarized mathematicians over AI’s role—and what it means for the next generation. scim.ag/4h2UUzy
scim.ag
OpenAI breakthrough triggers ‘existential crisis’ in math
Claimed Navier-Stokes solution has polarized mathematicians over AI’s role—and what it means for the next generation
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Janusz M. Bujnicki @jmbujnicki.bsky.social · 30/07/2026
Nucleic Acids Research is looking for a new Executive Editor! If you're an established researcher in RNA biology, translation, RNA virology, or related fields, apply! As a current Executive Editor, I highly recommend it. 📅 Deadline: 30 September 2026 academic.oup.com/nar/pages/ex...
academic.oup.com
NAR seeks a new Executive Editor
Overview of the Journal Nucleic Acids Research (NAR) is a leading open access molecular biology journal published by Oxford University Press. It provides rapid
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EMBL Events @events.embl.org · 31/07/2026
Get your calendars, because the new 2027 EMBL Annual Poster has arrived: s.embl.org/2027-poster Whether you'd like to enhance your skills in a practical course or engage with the latest research at one of our conferences, we've got you covered. See you at EMBL in 2027! 🙌 #LifeSciences #EMBL
The image depicts the 2027 EMBL Annual Poster featuring the new events programme for 2027. On the left side is a colorful banner, on the right is the list of events sorted by month
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Sharma Lab @sharmalab.bsky.social · 30/07/2026
🚨😀We are recruiting PhD and postdoctoral researchers at the Würzburg site of our Cluster of Excellence #NUCLEATE @nucleate-cluster.bsky.social on Nucleic Acid Sciences and Technologies🧬.👉 nucleate-cluster.de/wp-content/uploads/2026/07/2026-08_NUCLEATE_PhD-Postdoc_final_V02.pdf nucleate-cluster.de
nucleate-cluster.de
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Goeke Lab @goekelab.bsky.social · 27/07/2026
The 2nd Workshop of the Human RNome Project Consortium took place last week in sunny Toronto 🇨🇦 ☀️, and @clare-r.bsky.social from our team had the pleasure of attending and hearing about the fantastic work happening all over the globe on #RNA modifications.
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FEBS Letters @febsletters.bsky.social · 29/07/2026
The complex life of RNA EMBO | EMBL Symposium is taking place 13 - 16 Oct 2026 in Heidelberg AND virtually! Register by 1 September for on-site attendance here: www.embl.org/about/info/c... #RNA #RNAbiology @events.embl.org @embo.org @embl.org
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Science Magazine @science.org · 29/07/2026
An RNA editing enzyme restrains the excessive proliferation of intestinal stem cells—a major hallmark of #aging in humans and other organisms—according to new work in #ScienceSignaling involving fruit flies and data from mice and human samples. scim.ag/44VKex1
scim.ag
A reduction in A-to-I RNA editing by ADAR disrupts Pumilio-mediated inhibition of MAPK signaling to drive intestinal stem cell aging
The RNA editing enzyme ADAR slows intestinal stem cell aging by reducing proliferative MAPK signaling.
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Igor Ulitsky @igorulitsky.bsky.social · 29/07/2026
Academic tweeps! How do your institutes implement support for scientists in the rapidly changing AI-era - i.e, who is training the students to use Claude Code, and making sure they don't wreckt the cluster? Does it work well? Tell here/DM + pls RT (heading a sub-committee...)
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Janusz M. Bujnicki @jmbujnicki.bsky.social · 25/10/2025
Exciting news for the RNA research community! The Human RNome Project has been launched: a global effort to map all human RNAs and their chemical modifications. Proud to support it and contribute to the article in Genome Biology doi.org/10.1186/s130... #RNA #bioinformatics #RNAstructure #modomics
genomebiology.biomedcentral.com
Unlocking the regulatory code of RNA: launching the Human RNome Project - Genome Biology
The human RNome, the complete set of RNA molecules in human cells, arises through complex processing and includes diverse molecular species. While research traditionally focuses on four canonical nucl...
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NUCLEATE Cluster @nucleate-cluster.bsky.social · 22/07/2026
We spent the weekend at FORSCHA Munich Science Days with the other Munich clusters of excellence teaching kids all about DNA and RNA! 🧬✨ After learning how codons work, they put their new knowledge to the test by coding their very own DNA wristbands to take home. #NUCLEATECluster #ScienceComm
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Trends in Cell Biology @cp-trendscellbio.bsky.social · 18/07/2026
Nascent peptides emerge as regulators of mRNA stability
dlvr.it
Nascent peptides emerge as regulators of mRNA stability
Mobile genetic elements and their hosts engage in continuous evolutionary conflict. Marino et al. recently uncovered an unusual anti-CRISPR mechanism: the phage protein AcrVA2 triggers translation-coupled mRNA degradation by recognizing nascent Cas12. The findings suggest that nascent peptides may signal an underappreciated layer of gene regulation across the kingdoms of life.
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NUCLEATE Cluster @nucleate-cluster.bsky.social · 14/07/2026
Mission DNA: Accomplished! 🧬 NUCLEATE researchers from @zarnack-group.bsky.social and @koenig-lab.bsky.social hosted a group of 4th graders for 2 days of science. From extracting DNA to imaging cells via microscope, and touring the labs, we might have just met the next gen of scientists! 🧠
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Shiv Grewal @grewalsh.bsky.social · 08/07/2026
Introns have a hidden regulatory role! 🧬🎉 Delighted to share our latest paper showing that inefficiently spliced introns and spliceosomal proteins direct RNA methylation, engaging RNAi to silence retrotransposons and regulate gene expression nature.com/articles/s41...
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NUCLEATE Cluster @nucleate-cluster.bsky.social · 08/07/2026
The NUCLEATE Cluster of Excellence is hiring! Shape the future of nucleic acid sciences 🧬 🚀 Group Leaders: All 3 locations (LMU, TUM, JMU Würzburg) 🔬 PhDs & Postdocs: Open call in Würzburg and speculative applications welcome! Deadline: Aug 16, 2026 👉 More info: nucleate-cluster.de/careers/
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Sharma Lab @sharmalab.bsky.social · 08/07/2026
Exciting opportunity: We are recruiting 3 Independent Group Leaders for our Munich-Würzburg Cluster of Excellence #NUCLEATE on Nucleic Acid Sciences and Technologies 🧬. www.nature.com/naturecareers/job/12861192/independent-group-leader-at-nucleate-excellence-cluster/ @nucleate-cluster.bsky.social
nature.com
Independent Group Leader at NUCLEATE Excellence Cluster - Munich or Würzburg job with NUCLEATE Cluster | 12861192
Independent Group Leader in Nucleic Acid Sciences and Technologies within the NUCLEATE Cluster at LMU Munich, TU Munich or JMU Würzburg.
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König Lab @koenig-lab.bsky.social · 08/07/2026
📢 Great opportunity to join us for nucleic acid research!
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Schlundt lab @lab-nmr.bsky.social · 07/07/2026
Interested in RNA and proteins? Perfect! 😀 We seek to fill a fully funded 3+ years PhD position for a project on pre-mRNA splicing regulation using structural biochemistry in combination with cell biology and bioinformatics. Find more information on our lab's homepage and get in contact via e-mail!
biochemie.uni-greifswald.de
Analytische Biochemie - Fakultät - Universität Greifswald
Universität Greifswald
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NUCLEATE Cluster @nucleate-cluster.bsky.social · 24/06/2026
Welcome to the official account of the NUCLEATE Cluster of Excellence👋🧬 We’re building a community around nucleic acid sciences and technology, and innovation 🚀 Expect research highlights, collaborations, events, and opportunities — with open positions coming soon. #Biotech #Science #RNA #Research
NUCLEATE Cluster Logo
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König Lab @koenig-lab.bsky.social · 07/07/2026
Today, researchers from @nucleate-cluster.bsky.social, TRR 319, @sfb1551.bsky.social, and @sfb1361.bsky.social visited a primary school in Würzburg to show the fascinating world of DNA! 🧬 Thanks to the great team from the König and @zarnack-group.bsky.social labs at @uni-wuerzburg.de! #MissionDNA
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König Lab @koenig-lab.bsky.social · 15/06/2026
🚨 Join us for the RNA modification and Processing conference from 7-9 September at the IMB in Mainz @imbmainz.bsky.social #RNA #modification #meeting Register here: converia.uni-mainz.de/frontend/ind...
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Michaela Müller-McNicoll @mixmue.bsky.social · 06/03/2026
The iCLIP3 protocol was developed by Vlado Despic in a close and fun collaboration with @koenig-lab.bsky.social and @zarnack-group.bsky.social. The protocol was inspired by and successfully tested in the @embo.org #iCLIPcourse thanks to Elias Bechara, Chris Sibley and @rosario-avolio.bsky.social
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König Lab @koenig-lab.bsky.social · 06/03/2026
Interested in G-quadruplex RNA structures, protein-RNA interactions, cooperativity, or splicing. Check out our latest study from our collaborative research center for polymer concepts. @sfb1551.bsky.social @zarnack-group.bsky.social
biorxiv.org
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König Lab @koenig-lab.bsky.social · 06/03/2026
Want to map protein-RNA interactions? Check out our new iCLIP3 protocol. Featuring steamlined library prep and visualisation of protein-RNA complexes without radioactivity! Bioinformatics workflow on top :) With the Müller-McNicoll and Zarnack labs! @zarnack-group.bsky.social @mixmue.bsky.social
biorxiv.org
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Liana Lareau @lianafaye.bsky.social · 25/02/2026
This is my love letter to mRNA: an Ignite talk I gave as a fundraiser for the Lawrence Hall of Science. Custom mRNA cancer vaccines could be a game changer, but anti-science policies make their future so uncertain. www.youtube.com/watch?v=WUlu...
youtube.com
Decoding mRNA: How AI & Vaccines Cure Cancer | Liana Lareau | Ignite Talk
YouTube video by Ignite Talks - Smart Ideas From Around the World
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Lori Passmore @lapassmore.bsky.social · 25/02/2026
We are excited to be recruiting a new tenure track group leader in the Structural Studies Division at MRC LMB! It is an amazing place to start your own lab. @mrclmb.bsky.social Please get in touch if you have any questions. www.nature.com/naturecareer...
nature.com
Research Group Leader Tenure Track - Structural Studies - LMB 2775 - Cambridge, Cambridgeshire (GB) job with MRC Laboratory of Molecular Biology (LMB) | 12854636
Research Group Leader Tenure Track Starting Salary £67,979 to £76,868 per annum MRC Laboratory of Molecular Biology, Cambridge, UK The MRC Laborato...
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Michał Małszycki @malszycki.bsky.social · 25/02/2026
I’m thrilled to share that my PhD work has been just published in Cell. After a long and bumpy ride, we uncovered the core function of nuclear speckles -splicing of GC-levelled exons- and traced the evolution of this gene architecture and condensates themselves to amniotes.
Graphical abstract: Speckle-proximal and speckle-dependent RNA has short introns, and simultaneous emergence of multiple exons requires heightened concentration of spliceosome components.
Speckle-independent RNA has long introns and can be spliced well with or without speckles
Speckle dependent introns evolved in amniotes. The reduction in intron length was accompanied by the increase of the intronic GC content, giving rise to GC-levelled intronic architecture. This exon-intron architecture is not present outside of amniotes (Fish, Invertebrates), and these organisms lack nuclear speckles.
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Tugce Aktas @aktast.bsky.social · 25/02/2026
Our most recent work on the “function and evolution” of #nuclear-speckles is now online at Cell @cp-cell.bsky.social doi.org/10.1016/j.ce... Read the thread👇 for the highlights of our findings.
doi.org
Redirecting
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Helmholtz Institute Würzburg @helmholtz-hiri.bsky.social · 05/02/2026
🧬 Shape the future of #RNA-based infection research! We are inviting applications for @helmholtz.de Junior Research Group Leader Positions (f/m/d). 👉 Apply by February 15 at www.helmholtz-hiri.de/en/jobs-tale... (1/2)
helmholtz-hiri.de
Working at HIRI
At the HIRI, we do not just value excellent research. Short distances, an open door policy, and a good working atmosphere—this is what distinguishes us from others. Have a look at our current job…
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König Lab @koenig-lab.bsky.social · 12/02/2026
Congratulations Dr. Miona! Thank you for your amazing PhD work in the König Lab at @imbmainz.bsky.social and great to welcome you at the @uni-wuerzburg.de !
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EMBO @embo.org · 20/01/2026
Discuss #RNA 3' ends and their regulation at the EMBO Workshop "RNA 3' ends and beyond" in #Oxford, United Kingdom, 7–11 September 2026. Deadline: 4 May 2026 meetings.embo.org/event/26-rna3 #EMBORNA3EndsBeyond #RNAsky #LifeSciences #meeting #EMBOevents 🧪
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EMBL Australia @emblaustralia.org · 05/02/2026
🔦 Spotlighting Prof @edueyras.bsky.social - EMBL Australia Group Leader & newly appointed Director of the Shine‑Dalgarno Centre for #RNA Innovation at ANU! 🔗 Read about his vision for the Centre: www.emblaustralia.org/eduardo-eyra...
emblaustralia.org
Eduardo Eyras appointed Director of Shine‑Dalgarno Centre for RNA Innovation | EMBL Australia
From being recruited through a highly competitive international search to Centre Director, Professor Eduardo Eyras has charted an impressive journey at EMBL Australia. After joining the John Curtin Sc...
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The EMBO Journal @embojournal.org · 05/02/2026
RBM15B recognizes H3K79me2 to guide selective m6A-modification of mRNA and enhance oncoprotein translation in MLL-r leukemia Tian-Qi Chen, Yu-Meng Sun, Shun-Xin Zhu et al link.springer.com/article/10.1...
link.springer.com
RBM15B recognizes H3K79me2 to guide selective m6A-modification of mRNA and enhance oncoprotein translation in MLL-r leukemia - The EMBO Journal
The distribution of N6-methyladenosine (m6A) controls its substrate RNA fate, playing key roles in various biological processes. However, the mechanism underlying site-selective m6A deposition of RNAs...
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Molecular Cell @cp-molcell.bsky.social · 28/01/2026
Online Now: Why m⁶A? An RNA surveillance model Online now:
dlvr.it
Why m⁶A? An RNA surveillance model
Dierks and Schwartz discuss the m6A surveillance model, proposing that m6A flags “undesirable” intron-less RNAs (e.g., transposons) for decay. This provides a mechanism to distinguish “legitimate” spliced mRNAs and potentially suppress harmful RNA.
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Eduardo Eyras @edueyras.bsky.social · 28/01/2026
SWARM is an AI framework for nanopore direct RNA sequencing that detects m6A, pseudouridine (Ψ), and m5C mods at single-nucleotide & single-molecule resolution. Key innovation: Crosstalk-aware training with non-target mods & validated cellular signals to reduce false positives. 2/6
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Marie Winz @mariewinz.bsky.social · 01/02/2026
🚀 Just published: New1 shields mRNAs from no-go decay — by preventing ribosome crashes at specific codons. What’s new? New1 (eEF3 homolog) stops ribosomes from stalling at C-terminal AAA/AGG/CGU codons. No New1 = collisions + Hel2 recruitment + Cue2-mediated no-go decay.
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Genetics Society UK @gensocuk.bsky.social · 03/02/2026
Registrations are now OPEN! Join us in Newcastle for the “RNA in Physiology and Disease” conference, an international meeting bringing together world-leading RNA biologists and emerging researchers. Early bird deadline: 1 May Abstract deadline: 30 June Register now: genetics.org.uk/events/rna-i...
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John Lees @johnlees.bacpop.org · 30/01/2026
We are hiring for group leaders again — EBI is a great place to start your research group! embl.wd103.myworkdayjobs.com/EMBL/job/Hin...
embl.wd103.myworkdayjobs.com
Research Group Leader
Do you want to lead groundbreaking research in computational biology? Join us at EMBL-EBI! EMBL's European Bioinformatics Institute (EMBL-EBI) is seeking talented and highly-motivated scientists to jo...
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Zarnack Group @zarnack-group.bsky.social · 02/02/2026
Many thanks to everyone who joined on Friday and made it such a memorable afternoon—we greatly appreciate the warm welcome in Würzburg! @cctb-wue.bsky.social @biologie-uniwue.bsky.social #WueBiT
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René Ketting @reneketting.bsky.social · 08/01/2026
Interested in the unexpected? How about a link between piRNAs and maternal histone mRNAs … Great collab with @sebastianfalk.bsky.social, @koenig-lab.bsky.social and Florian Steiner. #piRNA #histone #mRNA #maternal #RNAbiology #RNASky www.biorxiv.org/content/10.6...
biorxiv.org
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Westermann Lab @westermannlab.bsky.social · 01/12/2025
🔊 Interested in doing a PhD on RNA-binding proteins in an abundant microbiota species and becoming a member of the German Priority Programme “Illuminating Gene Functions in the Human Gut Microbiome”? Apply here: www.uni-wuerzburg.de/karriere/sin...
uni-wuerzburg.de
Job offer for a PhD student position at the Chair of Microbiology
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