Sign in

Francesca Telese

@francescatelese.bsky.social
997 followers 927 following 33 posts

Studying the complexity of the brain to cure diseases. Genomics aficionado. Academic mom of 2. First generation college student. Lover of the outdoor life and espresso. www.teleselab.com

PostsRepliesMedia
Francesca Telese @francescatelese.bsky.social · 10h
Our new paper explores the effect of Reelin loss on acute response to fentanyl. Read the paper here: onlinelibrary.wiley.com/doi/10.1111/... Spoiler: it’s all about Fos!
onlinelibrary.wiley.com
Reln Haploinsufficiency Enhances Fentanyl‐Induced Locomotion and Dorsal Striatal Activity Without Affecting Opioid Reinforcement and Relapse‐Like Behavior
Reln haploinsufficiency does not alter fentanyl self-administration, relapse-like seeking, or conditioned place preference in mice. Instead, reduced Reln expression selectively enhances acute fentany....
000
Francesca Telese @francescatelese.bsky.social · 15h
I had a great time at the Neuronal Experience-Regulated Transcription meeting Really enjoyed the science, the conversations, and going back to the field where I started: gene regulation in learning and memory. The field has made enormous progress but some things never change: it’s all about Fos 😁
010
Reposted by Francesca Telese
Jeremy Day @daylab.bsky.social · 17h
Incredible FASEB #NeuroExpSRC meeting over the last couple of days including field leaders such as Michael Greenberg and Richard Tsien - congratulations to the organizers @ennatsew.bsky.social, @ramensaha.bsky.social, and @spiegel-lab.bsky.social on organizing such a fantastic conference.
0103
Reposted by Francesca Telese
Alexis Verger 🧬🧫🧪 @alexis-verger.cpesr.fr · 06/09/2026
Big review by Xizi Chen & Yanhui Xu in @natrevmcb.nature.com The molecular basis of transcription initiation by RNA polymerase II www.nature.com/articles/s41...
nature.com
The molecular basis of transcription initiation by RNA polymerase II - Nature Reviews Molecular Cell Biology
Recent technological breakthroughs have transformed our understanding of how transcription initiation in eukaryotes is regulated. This Review discusses the dynamics and roles of initiation-relevant pr...
02911
Reposted by Francesca Telese
JAX Genomic Education @jaxeducation.bsky.social · 20/08/2026
⏰ Submit your abstract by August 31! Join the Complex Trait Community annual meeting, hosted by @jax.org at @rouxinstitute.bsky.social in Portland, ME: www.jax.org/education-an... 🔹 Share your latest findings 🔹 Exchange ideas in interactive roundtables 🔹 Help shape a white paper for Genetics or G3
jax.org
23rd Annual Meeting of the Complex Trait Community
This meeting brings together early-career researchers and senior investigators exploring the genetic basis of complex traits across model organisms.
111
Reposted by Francesca Telese
I.B.A.N.G.S @ibangs.bsky.social · 01/09/2026
Seminar: Beyond the Variant: Experimental Models for Post-GWAS Biology Oct 14th, 12:00-1:00 pm Eastern. Registration: forms.cloud.microsoft/pages/respon...
043
Reposted by Francesca Telese
eartha mae @endoeartha.bsky.social · 28/08/2026
Extremely proud to share @acara333.bsky.social and my new paper, out today in @cp-neuron.bsky.social, where we develop a new fluorescent reporter of neural responses to estrogen! 🔬 paper 📝: www.cell.com/neuron/fullt... addgene page 🧬: www.addgene.org/254753/ #neuroskyence 🧪 1/10
graphical abstract of the manuscript depicting pink estrogen-sensitive neurons with a subset of their nuclei colored in green. These green nuclei represent estrogen receptor dependent neural gene transcription, tracked via the expression of a destabilized GFP with a 2 hour half-life. At top, in green is shown a cartoon of the neural response to estrogen across two estrous cycles, and below there is a cartoon of a mouse implanted with an optic fiber for in vivo imaging.
1319467
Reposted by Francesca Telese
Ana Pombo @apombo1.bsky.social · 23/06/2026
bioRxiv alert! CoPhasing resolves haplotype-specific 3D chromatin structures from GAM data, revealing extensive structural heterogeneity between human homologous chromosomes and its interplay with histone modifications and gene expression! Thanks to all coauthors! www.biorxiv.org/content/10.6...
biorxiv.org
12312
Reposted by Francesca Telese
Shenzhi Chen @shenzhichen1999.bsky.social · 25/08/2026
Excited to share our paper in @natgenet.nature.com on the de novo design of tissue-specific mammalian enhancers that function in vivo in mouse embryos. 🧬🐭 www.nature.com/articles/s41...
35826
Reposted by Francesca Telese
Reese Richardson @reeserichardson.bsky.social · 25/08/2026
A massive update: At least ~15 companies~ are selling scientists antibodies using faked validation data. We've documented 18,000+ manipulated images on 17,000+ products sold by leading laboratory suppliers including Thermo Fisher, Abcam, Santa Cruz Biotechnology, Millipore Sigma and Bio-Techne. 1/🧵
18455329
Reposted by Francesca Telese
#SingleCell preprints @prepub-singlecell.bsky.social · 25/08/2026
HuBMAP Data Portal: a resource for multimodal spatial and single-cell data of healthy human tissues #SingleCell 🧪🧬🖥️ arxiv.org/abs/2511.05708
021
Reposted by Francesca Telese
Ashley Cunningham, PhD @ashleyonthebrain.bsky.social · 24/08/2026
Very excited to share a new review with Dr. Ian Maze born out of my PhD work! 🧠🧬 We dive into how early life experiences shape the epigenetic landscape of the developing brain—and how these lasting changes may contribute to risk for affective disorders.
0389
Reposted by Francesca Telese
Dr Dorota SK @drdorotask.bsky.social · 18/08/2026
I’m very proud to share this work, now submitted for review. The first two authors were still in high school when they joined the lab for summer! Each summer they kept building on the project until the completion. It is a small story but we enjoyed working on it! www.biorxiv.org/content/10.6...
biorxiv.org
Reelin coordinates neuronal positioning and Muller glia scaffold maturation during retinal development
Reelin is a secreted extracellular matrix protein that regulates neuronal migration and layer formation in the developing brain, yet its role in retinal development remains incompletely defined. Here,...
2172
Francesca Telese @francescatelese.bsky.social · 05/05/2026
Excited to share this preprint. We mapped transcription initiation in astrocytes at single-base-pair resolution to define cell-type-specific active regulatory elements.
052
Reposted by Francesca Telese
Stirling Churchman @stirlingchurchman.bsky.social · 09/09/2025
Our new pre-print from the Greenberg and Churchman labs shows that activity-dependent modulation of RNA stability is a major, and underappreciated, mechanism of gene regulation in neurons. Tutorial below! www.biorxiv.org/content/10.1... (1/11)
biorxiv.org
HuD controls widespread RNA stability to drive neuronal activity-dependent responses
Neuronal activity shapes brain development and refines synaptic connectivity in part through dynamic changes in gene expression. While activity-regulated transcriptional programs have been extensively...
16823
Francesca Telese @francescatelese.bsky.social · 04/04/2025
How does cannabis use during adolescence impact brain development? Using single-nuclei transcriptomics in mice, we found that cannabis and a genetic risk factor (Reln) interact to disrupt gene expression programs underlying neuronal migration of neuroblasts in the nucleus accumbens.
030
Reposted by Francesca Telese
Keri Martinowich @martinowk.bsky.social · 31/01/2025
Our paper providing transcriptomic profiles of lateral septum (LS) cell types in human 🧠 is now online: www.cell.com/iscience/ful... All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
cell.com
Transcriptomic characterization of human lateral septum neurons reveals conserved and divergent marker genes across species
Neuroscience; Cellular neuroscience; Transcriptomics
25913
Reposted by Francesca Telese
Science Magazine @science.org · 22/01/2025
“The impact of the collective executive orders and directives appears devastating.” scim.ag/40ureTO
scim.ag
Trump hits NIH with ‘devastating’ freezes on meetings, travel, communications, and hiring
Researchers facing
471019723
Reposted by Francesca Telese
The Transmitter @thetransmitter.bsky.social · 21/01/2025
A challenge for basic scientists is to guarantee that the future generation of health-care professionals and policymakers understands the importance of addiction and mental health research. By Omar Abubaker, @karlakaun.bsky.social, @ericjnestler.bsky.social bit.ly/42oULRu #neuroskyence
bit.ly
Neuroscientists need to do better at explaining basic mental health research
The knowledge gap between scientists, health-care professionals, policymakers and people with mental health conditions is growing, slowing the translation of basic science to new treatments.
15821
Reposted by Francesca Telese
Monique Smith @moeneuro.bsky.social · 19/01/2025
It is Faculty interview season, so I created a doc with compiled Chalk Talk advice! Please share widely- this shouldn't be hidden curriculum... there is a recipe for success! I will also share videos of my practice and actual UCSD chalk talk with anyone who wants it! DM me!
09747
Reposted by Francesca Telese
Teif lab @teiflab.bsky.social · 14/01/2025
Here is a growing list of conferences and schools in gene regulation for 2025 generegulation.org/conferences-.... You can order/filter this list by the date, deadline, location. Please reply here to suggest new events* *should be specific to gene regulation
generegulation.org
Conferences & Schools – 2025 – Gene Regulation – Teif Lab
288648
Reposted by Francesca Telese
Dan Willingham @dtwuva.bsky.social · 09/01/2025
How does the brain avoid overwriting old memories when new ones are created? New data (in mice) provides a hint: old & new memories are processed during different stages of sleep www.nature.com/articles/d41...
nature.com
Why don’t new memories overwrite old ones? Sleep science holds clues
Research in mice points towards a mechanism that avoids ‘catastrophic forgetting’.
0163
Reposted by Francesca Telese
Kumail Nanjiani @kumail.bsky.social · 09/01/2025
If people want to help and are able to donate to help those affected by these LA fires, here are places they can donate: friendsindeedpas.org/donate-to-fr... cpf.salsalabs.org/disasterreli... www.directrelief.org/emergency/ca... www.pledge.to/ccfwildfirer... www.globalgiving.org/projects/cal...
directrelief.org
California Fire Relief
In response to fire across California, Direct Relief provides N-95 masks, medicine, and other resources to public agencies and first responders in wildfire-affected communities.
11765613991
Francesca Telese @francescatelese.bsky.social · 22/12/2024
Transcriptome-scale RNA-targeting CRISPR screens reveal essential lncRNAs in human cells www.sciencedirect.com/science/arti...
sciencedirect.com
Transcriptome-scale RNA-targeting CRISPR screens reveal essential lncRNAs in human cells
Mammalian genomes host a diverse array of RNA that includes protein-coding and noncoding transcripts. However, the functional roles of most long nonco…
031
Reposted by Francesca Telese
Siegenthaler Lab @siegenthalerlab.bsky.social · 19/12/2024
This is fascinating! Congrats @brunetlab.bsky.social & colleagues! Cool findings on vascular/pericyte & meningeal/perivascular fibroblast cell types - important to exercise to keep those 🧠 blood vessels young and functional 🏃‍♀️🏋️‍♂️...but also what are the fibroblasts up to?!? 👀 🧪 #BBB #fibroblast
Picture of a heat map with a blue box and arrow indicated a specific area of the plot
14710
Francesca Telese @francescatelese.bsky.social · 19/12/2024
TF motif grammar on nucleosome fibres acts as signpost elements, directing TF combinatorial binding to enhancers www.nature.com/articles/s41...
nature.com
Nucleosome fibre topology guides transcription factor binding to enhancers - Nature
Motif grammar on nucleosome fibres acts as signpost elements, directing TF combinatorial binding to enhancers.
051
Reposted by Francesca Telese
Fabian Theis @fabiantheis.bsky.social · 12/12/2024
1/🚀 Excited to share RegVelo, our new cell model combining RNA velocity with gene regulatory network (GRN) dynamics to model cellular changes and predict in silico perturbations. Here's how it works and why it matters! 🧵👇 biorxiv.org/content/10.1101/2024.12.11.627935v1
311247
Francesca Telese @francescatelese.bsky.social · 12/12/2024
Good bye #ACNP2024. Thanks for the great science and the best karaoke night!
0163
Reposted by Francesca Telese
I.B.A.N.G.S @ibangs.bsky.social · 11/12/2024
Travel Award Stipends - Students, Postdocs, Junior faculty. GBB25 19-22 May, 2025, Yanuca Island, Fiji Deadline: 17th January 2025. More here: www.ibangs.org/travel-award... @twbredy.bsky.social
ibangs.org
Travel Award Submission and Guidelines
003
Reposted by Francesca Telese
The Transmitter @thetransmitter.bsky.social · 09/12/2024
Although studying sex differences in the brain is complex, it is essential. Armin Raznahan @bogglerapture.bsky.social explains why ignoring different patterns of risk for brain-based conditions among males and females does us all a disservice. www.thetransmitter.org/sex-differen...
thetransmitter.org
Males and females show different patterns of risk for brain-based conditions. Ignoring these differences does us all a disservice.
Although studying sex differences in the brain is complex, technically awkward and socioculturally loaded, it is absolutely essential.
1184
Reposted by Francesca Telese
ACNP @acnporg.bsky.social · 10/12/2024
Don't miss the Women and Gender-Minority Luncheon Symposium, "Respond Rapidly and Professionally to Macro- and Micro- Aggressions", sponsored by the Gender Equity and Inclusion Committee. #ACNP2024 📅 Today, December 10th 🕒 11:00am - 1:00pm MST 📍 Grand Saguaro
073
Reposted by Francesca Telese
Haley Lab @labohaley.bsky.social · 09/12/2024
Have you been interested combining Perturb-Seq screening with Cas12a’s unique capabilities for multiplexed guide RNA expression? Us too! So, we figured out some useful tricks to make that possible, which you can find in our new pre-print. Short thread below: www.biorxiv.org/content/10.1...
biorxiv.org
Degron-modified Cas12a enhances single-cell CRISPR screening
Single-cell CRISPR (Perturb-seq) screens have primarily relied on Cas9 whereas Cas12a, despite its unique effectiveness for multiplex guide expression, remains underexplored. This may be due to Cas12a...
22211
Francesca Telese @francescatelese.bsky.social · 08/12/2024
Desert views at #ACNP2024 Excited to meet the ACNP community. Stop by my poster M116 on Monday afternoon.
060
Francesca Telese @francescatelese.bsky.social · 07/12/2024
Baking a prune cake for my kids before heading off to a conference! #ACNP #AcademicMom
Prune cake with Almsrgnacg
040
Francesca Telese @francescatelese.bsky.social · 07/12/2024
Excited for my 3rd #ACNP. My lab at #UCSD works on gene regulation in substance use disorders. Stop by my poster on Monday afternoon to check out our latest single cell genomics findings in outbred rats #genetics #genomics #singlecell #opioids
1103
Francesca Telese @francescatelese.bsky.social · 07/12/2024
Celebrating the recent achievements of our lab members. Grateful for this talented, hardworking, and inspiring team. #Teamwork #LabLife
020
Reposted by Francesca Telese
bioRxiv Genomics @biorxiv-genomic.bsky.social · 28/11/2024
Paired CRISPR screens to map gene regulation in cis and trans www.biorxiv.org/content/10.1101/202…
biorxiv.org
Paired CRISPR screens to map gene regulation in cis and trans https://www.biorxiv.org/content/10.1101/2024.11.27.625752v1
Recent massively-parallel approaches to decipher gene regulatory circuits have focused on the discov
03614
Francesca Telese @francescatelese.bsky.social · 28/11/2024
Pecan pie is ready. Happy Thanksgiving new 🦋 friends #thankgiving2024
Pecan pie
040
Reposted by Francesca Telese
Magdalena Skipper @magdalenaskipper.bsky.social · 21/11/2024
A ‘Wikipedia for cells’: researchers get an updated look at the Human Cell Atlas, and it’s remarkable #HCA @natureportfolio.bsky.social www.nature.com/articles/d41...
nature.com
A ‘Wikipedia for cells’: researchers get an updated look at the Human Cell Atlas, and it’s remarkable
Coming less than a decade after its launch, the studies emerging from the global project are a major achievement. Funders should sign up for the long haul.
12413
Reposted by Francesca Telese
Marija Kundakovic @kundakoviclab.bsky.social · 25/11/2024
OK, I've made a Starter Pack on Neuroepigenetics, Chromatin, and Gene Regulation! Please share and let me know who else should be added to this list. go.bsky.app/6LWE4dr
227334
Reposted by Francesca Telese
Dr Kathleen Millen @neurodevkathy.bsky.social · 24/11/2024
#NIH #NINDS paylines are at 8% for fiscal 2025. Tough year is due to increased research costs and federal budget uncertainty for FY 2025. Director's message here. Worth reading. www.ninds.nih.gov/news-events/...
ninds.nih.gov
Featured Director's Message
23823
Reposted by Francesca Telese
Anne Carpenter @drannecarpenter.bsky.social · 29/10/2024
Blog post on using AI in academia from @arjunraj.bsky.social and the great folks at Mid Career PI Slack! Finally, a How To guide for how to use AI effectively in academia. arjun-raj-lab.gitbook.io/arjun-rajs-t...
arjun-raj-lab.gitbook.io
Using AI in academia | Arjun Raj's Tools For Science
Arjun Raj, with input from Anne Carpenter and the members of Mid-Career PI Slack
39336
Reposted by Francesca Telese
Sergiu P. Pasca @sergiuppasca.bsky.social · 17/11/2024
Research funded by NIH generated $2.46 in economic activity for every $1 of funding in 2023 [a total of $92.9 billion] www.fiercebiotech.com/research/rep...
fiercebiotech.com
Report: Every dollar of NIH research funding doubles in economic returns
Research funded by the National Institutes of Health (NIH) generated $2.46 in economic activity for every $1 of funding in 2023, a total of $92.9 billion, according to an
2245105
Reposted by Francesca Telese
Isaac Yellan @downbythebayes.bsky.social · 15/11/2024
(1/8) 🚀 Excited to share our findings on a large-scale ChIP-seq assay for 166 previously uncharacterized human transcription factors (TFs) and their roles in both regulatory regions, and more strikingly, the “dark matter” genome. 🌌 doi.org/10.1101/2024....
doi.org
Extensive binding of uncharacterized human transcription factors to genomic dark matter
Most of the human genome is thought to be non-functional, and includes large segments often referred to as “dark matter” DNA. The genome also encodes hundreds of putative and poorly characterized tran...
39439
Francesca Telese @francescatelese.bsky.social · 17/11/2024
Review: The role of astrocytes in neuroinflammation www.science.org/doi/10.1126/...
000
Reposted by Francesca Telese
Sasha Gusev @sashagusevposts.bsky.social · 16/11/2024
I wrote about Eric Turkheimer's recent book on "the nature-nurture debate", which should be of interest to people thinking not just about the genetics of behavior but complex traits more broadly. A 🧵:
open.substack.com
Book Review: Eric Turkheimer's "Understanding the Nature-Nurture Debate"
Or, some thoughts on The Gloomy Prospect and the Gloomy Present
514352
Reposted by Francesca Telese
Lior Pachter @lpachter.bsky.social · 22/09/2023
I've posted the notes/slides for my computational biology class at github.com/pachterlab/B... Topics were chosen based on appearing in >=3 bio areas, although for focus examples are all drawn from #scRNAseq. Homeworks include both theory and exploration of data (via GoogleColab).
28722
Reposted by Francesca Telese
Denis Wirtz @deniswirtz.bsky.social · 16/11/2024
Download our database of 313 different postdoctoral fellowships. For each entry, we provide link to funder, description, amount, deadline, and eligibility criteria (e.g. citizenship). Download our database here: research.jhu.edu/rdt/funding-...
1162117
Francesca Telese @francescatelese.bsky.social · 16/11/2024
Chromatin architecture mapping by multiplex proximity tagging www.biorxiv.org/content/10.1...
000
Reposted by Francesca Telese
Vijay Ramani @vram142.bsky.social · 15/11/2024
The latest from our group, led by Megan Ostrowski and @martyyang.bsky.social, is now published in final form (www.cell.com/cell/fulltex...! Many thanks to our excellent peer reviewers for suggesting several experiments (including CAF-1 perturbation) to really improve the study =) #epigenetics
cell.com
The single-molecule accessibility landscape of newly replicated mammalian chromatin
By developing a long-read sequencing method to simultaneously map replication status and protein-DNA contacts in cells, Ostrowski, Yang, et al. show that newly replicated chromatin is enriched for unw...
1420775