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Edan Foley

@edanfoley.bsky.social
438 followers 437 following 176 posts

Studying zebrafish intestinal biology at the University of Bath with an interest in sex and mucosal immunity. Trying to import the oxford comma to Britain. she/her 🐠 🏳️‍🌈 🏳️‍⚧️ 🎶

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Reposted by Edan Foley
MwahahahahahadScientist @mads100tist.bsky.social · 29/08/2026
Do you work with microscopy images and segment to quantify or track? Do you study cell biology? development? Gather round! Let me tell you about FOCUS-3D, a segmentation algorithm that is fast, accurate and can be used on any model. We used it here to study zebrafish development. 🧪 (thread)
biorxiv.org
FOCUS‑3D: Robust, generalizable volumetric cell segmentation for three‑dimensional fluorescence microscopy
Understanding how cells establish spatial organization within tissues is a fundamental question in life sciences. While modern three-dimensional fluorescence microscopy captures large-volume tissue ar...
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Richard Sever @richardsever.bsky.social · 27/08/2026
$3.7 billion spent on APCs in 2025. That's ~1000X more than it costs to run bioRxiv/medRxiv. Worth thinking about as we consider how to fund infrastructure... arxiv.org/pdf/2608.16322
arxiv.org
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Brian Stevenson Ph.D. spirochete lab @bstevensonlab.bsky.social · 20/08/2026
Recent radio interview www.wuky.org/podcast/dr-g... #MicroSky
wuky.org
Two grant-funded research projects could help foster new preventive treatments for Lyme disease
There’s a virus within a bacterium within a parasite, and University of Kentucky researchers are figuring out how to make them kill each other. Dr. Greg talks with a UK researcher who has been studyin...
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Keri Martinowich @martinowk.bsky.social · 14/08/2026
Sorry, I know I've posted enough #FluorescenceFriday images 🔬, but this is so frigging cool - 3D reconstruction from Xenium data of cell types across the nucleus accumbens in human 🧠. Credit to JHU Biostats PhD student Jianing Yao and @rphillips3.bsky.social who are leading this project 🤩
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Needhi Bhalla 💅🏽 @needhibhalla.bsky.social · 13/08/2026
“Fascism works not only by the passage of arbitrary, dehumanizing laws but by the arbitrary, dehumanizing enforcement of the laws.”
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Harmit Singh Malik @harmitmalik.bsky.social · 12/08/2026
Amid the rush to burn DEI infrastructure to the ground, it’s worth remembering that the goal was never favoritism. It was a fair shot for people long excluded by unconscious or real bias — prominent scientists, including Nobel laureates, openly argued some “races” were innately unsuited for science.
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Needhi Bhalla 💅🏽 @needhibhalla.bsky.social · 07/08/2026
The last 2 years have been disturbingly clarifying, scientifically, politically and organizationally. I have had to focus on what I have control over: organizing at my uni, ensuring the success of trainees in my lab and acknowledging that my approach to research may not align with future funding
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BrunetLab @brunetlab.bsky.social · 05/08/2026
Excited about our new manuscript @elife.bsky.social: Engulfment by brain macrophages in a short-lived vertebrate doi.org/10.7554/eLif...! Huge congratulations to Rahul Nagvekar and the team!! ✨⭐🍾🐟 We generated a genetic model to identify engulfing macrophages in the #killifish aging brain!
doi.org
Engulfment by brain macrophages in a short-lived vertebrate
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John F. Rawls @jfrawls.bsky.social · 04/08/2026
The Rawls Lab is hiring! We are seeking a motivated research technician to support cutting-edge studies in gastrointestinal physiology using zebrafish & mice. To learn more about this hands-on & in-person position at Duke University in Durham NC, click here: careers.duke.edu/job/Durham-R...
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Maureen Barr @barrlab.bsky.social · 02/08/2026
“You’re not seen as middle age, you’re seen as old, whereas your comparable male counterpart is seen as in his prime time,” @amydiehl.bsky.social said about the gendered ageism that women ages 40-60 can face.
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Kristen Kwan @blockintheback.bsky.social · 03/08/2026
I am sincerely honored and excited to be named the Vice Chair for Vision Research at the @moraneyecenter.bsky.social at @utah.edu. I am thrilled to work with everyone to build upon the Moran's rich history in vision research. Stay tuned for much more to come - we will be growing!
healthcare.utah.edu
Moran Eye Center Names Kristen M. Kwan, PhD, Vice Chair for Vision Research
The John A. Moran Eye Center at the University of Utah has named Kristen M. Kwan, PhD, Vice Chair for Vision Research. In this leadership role, she will help guide the strategic direction of the Moran...
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Petros Ligoxygakis @petrosligoxygakis.bsky.social · 31/07/2026
The “fruit” of my sabbatical year at Chongqing University: how an insect discriminates between pathogenic vs. commensal fungi and how we can manipulate that interaction to generate biological insecticides for eliminating insect pests and recover crops. www.nature.com/articles/s41...
nature.com
Immune surveillance on the insect body surface recognizes a pathogen-derived fungal protease to activate defenses - Nature Communications
Early immune surveillance promotes effective antifungal defense. Here, the authors show that a secreted lectin, IML1, binds diverse fungal spores on the cuticle, but immunity is triggered only upon cl...
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Reposted by Edan Foley
Veronica @vfarm15.bsky.social · 28/07/2026
Honored and delighted to share this piece — every scientist really does have a role to play in advocacy, even if it doesn't look like what you'd expect. I hope this encourages others to find their own way to advocate, whatever form that takes. 🔬💛
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Mayor of London, Sadiq Khan @london.gov.uk · 25/07/2026
To every trans Londoner: this city is yours too. Today we celebrate London Trans+ Pride and reaffirm a simple truth: you should be free to live as yourself, without fear or prejudice. You are loved. You are wanted. You belong here.
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Paleogenomics - María Ávila Arcos @paleogenomics.bsky.social · 21/07/2026
New idea: Students interested in joining a lab get reference letters about the PI by former trainees.
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Edan Foley @edanfoley.bsky.social · 20/07/2026
The final version of our paper looking at effects of RANK deficiency on gut function in zebrafish is now online!
nature.com
Rank-dependent control of tuft and BEST4 cell development in the intestine - Nature Communications
Here they provide evidence that RANK signaling contributes to specification of intestinal epithelial tuft and BEST4 cells, and that loss of RANK impairs the ability of the host to navigate infections ...
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Melanie D. White @melaniedwhite.bsky.social · 17/07/2026
Happy #FluorescenceFriday! 🔥🧪🔬 A blaze of neural crest cells migrates through a developing quail embryo on one of embryonic development's most epic journeys. Beautifully captured by @vanderspuy.bsky.social 👩‍🔬🐣 #Devbio
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Louisa @louisathelast.bsky.social · 12/07/2026
Woke up to pee, saw Lindsey Graham died, immediately jumped on Bluesky to see the good posting. Have fun, everyone, but please steer away from the homophobia. Maybe this dude would have been less of a massive piece of shit if he hadn’t been steeped in self-loathing. Dunk responsibly
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Keri Martinowich @martinowk.bsky.social · 10/07/2026
For #FluorescenceFriday - human induced pluripotent stem cells trying to differentiate into locus coeruleus-like neurons... pretty pink one on their way and stained for tyrosine hydroxylase 🔬🤩🧠. Image credits to @lieberinstitute.bsky.social Stem Cell core and Imaging Development team. So excited!
Microscopy image of cells in a dish that are stained different colors for cell type markers
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Nichole Broderick, PhD @nabroderick.bsky.social · 10/07/2026
This is a great meeting and I’m looking forward to attending and catching up with all the great symbiosis science. I’ll also be there in my role as EiC of the new @isme-microbes.bsky.social journal ISME Host Microbe. Happy to discuss about your next manuscript!
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Nichole Broderick, PhD @nabroderick.bsky.social · 07/07/2026
Let’s fill these remaining states and support a great program, connecting classrooms with real scientists!
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Tristan A.F. Long @thelonglab.bsky.social · 30/06/2026
My contribution to the ongoing "1%" science discourse is this picture you can send to your favourite preprint author(s) after reading their papers to tell them you liked their work! #SciArt #PawReview
Cartoon of a red panda (Ailurus fulgens) looking forwards with a paw raised. Around the panda is written "THIS PREPRINT IS 100% PAWESOME!"
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Maxim Greenberg @maxvcg.bsky.social · 25/06/2026
@biorxivpreprint.bsky.social is this amazing democratizer of science, and @qedscience.bsky.social is now creating an "elite/other" classification. I find it so off-putting, it makes me never want to use the service. This technology is being grossly misused, in my opinion...
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Needhi Bhalla 💅🏽 @needhibhalla.bsky.social · 24/06/2026
the name is unfortunate and some of the analysis is striking. however, it’s interesting that they perform some analysis (where the “top-ranked” preprints originate from or are funded by) but not other analysis (gender of authors), given some AI agents’ bias
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Edan Foley @edanfoley.bsky.social · 22/06/2026
Because of the month that's in it, I thought it might be worth sharing my feelings about the UK from the perspective of an LGBTQ individual that recently moved here. Caveats: I'm an n of 1, and I've only been here for six months, so these really are first impressions.
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Mark A. Hanson @hansonmark.bsky.social · 18/06/2026
No but seriously: @reviewcommons.org is the best publishing experience you didn't know you were missing. Have had 4 papers through Review Commons now. All positive experiences (even the critical ones). If I'd submit to a journal in Review Commons, I might as well just submit to Review Commons! 👍
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Society for Developmental Biology @socdevbio.bsky.social · 18/06/2026
✨ We look forward to hosting Lesley Weaver from Indiana University at the #2026SDB in Las Vegas! 🎰 Her lab studies how inter-organ communication and hormone signaling regulate adult stem cells and maintain tissue homeostasis. 🪰✨ #devbio #drosophila 🪸
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Ákos T Kovács @evolvedbiofilm.bsky.social · 16/06/2026
A comment in @natcomms.nature.com for the use of defined microbial communities for microbial applications I was glad to be involved in this highly collaborative discussions during online workshops last year, the thought from which are now published www.nature.com/articles/s41...
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Stylianos Lefkopoulos (he/him) @slefkopoulos.bsky.social · 12/06/2026
🌈 At a time when progress can't be taken for granted, I 'm especially proud to share this @natcellbio.nature.com Q&A piece. I had the pleasure to discuss with @gunawanlab.bsky.social about his inspiring journey as an LGBTQIA+ immigrant. #PrideInSTEM 👉 rdcu.be/fnXQ6 www.nature.com/articles/s41...
nature.com
A scientist can come from anywhere - Nature Cell Biology
This June, we celebrate Pride by discussing with Felix Gunawan, assistant professor at the University of Toronto and co-affiliate group leader at the University of Münster, about his personal and acad...
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Edan Foley @edanfoley.bsky.social · 09/06/2026
Normally writing papers exhausts me, but working on this brought such joy. A very exciting study from Mckenna linking errant estrogen signaling with gut defects in NOD2-deficient fish.
journals.plos.org
Estrogen impacts NOD2-dependent regulation of intestinal homeostasis
Crohn’s disease is associated with mutations in the innate immune receptor NOD2, but the mechanisms underlying NOD2 regulation of intestinal homeostasis remain unclear. This study shows that NOD2 inte...
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derek guy @dieworkwear.bsky.social · 02/06/2026
Happy Pride Month. If you're a gay man, please remember your power. People often think that gay men are innately fashionable, which means if you wear some stupid shit for long enough, straight people, including homophobes, will copy you and then you can laugh at them.
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Julie S. Lalonde @julieslalonde.bsky.social · 24/05/2026
I have a laundry list of issues with this with one of them being "keeping streets safe" language. It's never referring to dangerous drivers or street harassment. It's a term that's meant to emphasize vague "urban crime" when most violence happens in private homes and spaces.
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Irene Miguel-Aliaga @irenemiguel-aliaga.bsky.social · 21/05/2026
Well done Cindy! Fun collaboration with Anissa Kempf, Markus Affolter, Martin Muller and colleagues on the ontogeny of adult feeding www.science.org/doi/10.1126/...
science.org
Intestinal obstruction impairs feeding and promotes sleep in Drosophila melanogaster
Intestinal obstruction disrupts feeding and promotes sleep in freshly eclosed flies.
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Maureen Barr @barrlab.bsky.social · 19/05/2026
Good morning Bluesky!
Blue ceramic coffee mug resting on a knee
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Keri Martinowich @martinowk.bsky.social · 15/05/2026
For #FluorescenceFriday, celebrating some more good paper news with this really pretty image labeling prefrontal cortical neurons with projections to the locus coeruleus with chemogenetic receptors. Image credit to @rehg-j.bsky.social @jorge-miranda.bsky.social 🧠🧪🔬
Fluorescent microscopy image of a section of mouse brain tissue with viral labeling with green and red fluorophores. Overlap makes neurons appear yellowish-orange on image.
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Alejandra Caraballo @esqueer.net · 06/05/2026
Trevor Project released its annual LGBTQ youth mental health report. The results are shocking. 40% of trans youth seriously considered attempting suicide in the past year. Trans youth who wanted hormones but couldn’t access them were nearly twice as likely to attempt suicide than those who could.
Key findings from The 2025 U.S. National Survey on the Mental Health of LGBTQ+ Young People include:

36% of LGBTQ+ young people seriously considered attempting suicide in the past year, including 40% of transgender and nonbinary young people. 
1 in 10 LGBTQ+ young people attempted suicide in the past year.
44% of LGBTQ+ young people who wanted mental health care in the past year were not able to get it.
90% of LGBTQ+ young people said recent anti-LGBTQ+ laws, policies and debates caused them stress or anxiety.
LGBTQ+ young people of color attempted suicide at higher rates than their White peers, and nearly a third (32%) also experienced racial or ethnic discrimination, in addition to anti-LGBTQ+ discrimination.
Transgender and nonbinary young people who wanted hormones but couldn’t access them were nearly twice as likely to attempt suicide than those who could.
Over half (59%) of LGBTQ+ young people ages 13-17 experienced bullying in the past year, and those who did reported significantly higher rates of attempting suicide in the past year than their peers.
LGBTQ+ young people who reported living in very accepting communities attempted suicide at less than a third of the rate of those who reported living in very unaccepting communities.
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Needhi Bhalla 💅🏽 @needhibhalla.bsky.social · 02/05/2026
“Now let’s tear this world apart and build a better one.” ❤️
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Tera Levin @teralevin.bsky.social · 02/05/2026
Bacterial immune proteins have repeatedly evolved to become parts of eukaryotic immunity. But how? Our new preprint uncovers a recent horizontal transfer event & shows how eukaryotes co-opted a toxic bacterial immune protein 🦠🧪🧵 1/
Microscopy image showing yeast cells expressing a fluorescently tagged version of the amoeba TirC protein. TirC forms filaments that span the yeast cells.
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Keri Martinowich @martinowk.bsky.social · 28/04/2026
Since #FluorescenceFriday usually gets the spotlight, taking today to give brightfield microscopy some love with this really beautiful image of a Nissl stain in the dorsal raphe nucleus of the human 🧠. Image credits to @ishbeldelrosario.bsky.social @svitlanabach.bsky.social 🔬👩‍🔬🧪
Histological staining of a section of human brain tissue at the level of the dorsal raphe nucleus, using cresyl violet (appears purple) to label Nissl bodies.
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Keri Martinowich @martinowk.bsky.social · 20/04/2026
Happy spring Monday to the #NativePlants 🌱 feed. My Black Chokeberries (Aronia melanocarpa) are now in full bloom. I love the delicate white flowers on these, but also really like the glossiness on the leaves!
Cluster of small white flowers
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Prof Sheena Cruickshank @sheencr.bsky.social · 18/04/2026
Excellent news as RSV vaccine in pregnancy protects babies from developing RSV and massively reduces risk of getting seriously ill and needing Hospitalisation
bbc.co.uk
Pregnancy vaccine reduces baby hospital admissions for RSV by 80%
A study confirms the vaccine gives excellent protection for babies against life-threatening chest infections.
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Fiona J Whelan @whelanfj.bsky.social · 13/04/2026
Each publication in a #Microbio26 journal helps fund 4 student travel grants. Please publish with us if you can!
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Edan Foley @edanfoley.bsky.social · 10/04/2026
I miss Vibrio. This is absolutely fascinating science.
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Hiten Madhani @hitenmadhani.bsky.social · 09/04/2026
A welcome editorial message. www.nature.com/articles/s41...
nature.com
Advancing microbiology through foundational science - Nature Microbiology
Microorganisms have tremendous potential to impact humanity, but such revelations are only possible in the light of foundational, discovery-based microbiology research.
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MwahahahahahadScientist @mads100tist.bsky.social · 08/04/2026
If cell diversity and developmental biology are your thing, my talk will extremely be your jam. Come for the whole-mount spatial transcriptomics and 14Tb light-sheet videos, stay for the humble RNA in situs. Everyone loves in situs 🧪🐟🧅
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Maureen Barr @barrlab.bsky.social · 30/03/2026
On my CV and biosketch, I list motherhood (2000, 2002, 2004 - present). Then I wanted my reviewers/critics to know. Now I want ECR women to know. Ask for help. Find your support network. It is critical that us senior women in science support and advocate for ECR #womeninSTEM. PAY IT FORWARD
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Nichole Broderick, PhD @nabroderick.bsky.social · 30/03/2026
Dear letter writers, study sections, grant panels, etc…..(though expecting little will resonate)….
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Dr. Ahna Skop @ahnaskop.bsky.social · 29/03/2026
pnas.org
How the 2025 NIH grant terminations varied by researchers’ demographic groups | PNAS
In early 2025, the NIH unexpectedly terminated 2,291 active research grants, withdrawing $2.45 billion and disrupting thousands of projects. While ...
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Melanie Blokesch @mblokesch.bsky.social · 29/03/2026
Open postdoc position in my lab on HGT and interbacterial competition. We seek candidates with a PhD in microbiology (or related fields)+ strong 1st-author publications. Curious, highly motivated, and dedicated team players ready to contribute fully are encouraged to apply. Details: tiny.cc/cz01101
tiny.cc
Open Positions
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Irene Miguel-Aliaga @irenemiguel-aliaga.bsky.social · 28/03/2026
Why chatter among organs matters... thanks @newscientist.com for featuring some of our work www.newscientist.com/article/2513...
newscientist.com
The secret signals our organs send to repair tissues and slow ageing
Your organs are constantly talking to each other in ways we’re only beginning to understand. Tapping into these communication networks is opening up radical new ways to boost health
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