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Yoann Santin

@ysantin.bsky.social
525 followers 463 following 33 posts

Molecular microbiologist. CNRS researcher. Group Leader at CBI-Toulouse. Post-doc at @UCLouvain_be in the @LalouxLab @EMBO fellow #Bdellovibrio, former in @CascalesLab #T6SS Website : santinlab.weebly.com

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Reposted by Yoann Santin
Susan Schlimpert @s-lab.bsky.social · 13/10/2026
Two PhD opportunities in our lab: 1. What do bacterial NLR proteins do beyond phage defence? Join us to explore how these proteins regulate viability, multicellular development and antibiotic production in Streptomyces. Apply 👉 shorturl.at/N8Abx #PhD #Microsky #Bioinformatics #Streptomyces
shorturl.at
From Defence to Antibiotic production: Uncovering New Roles for NLR Signalling in Multicellular Bacteria (SCHLIMPERT_J27DTP) | Doctoral Training Partnership
Nucleotide-binding and oligomerisation domain-like receptors (NLRs) are famous for driving immune responses in plants and animals. However, their extensive presence in multicellular…
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Yoann Santin @ysantin.bsky.social · 10/10/2026
Thank you very much Tung ☺️
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Yoann Santin @ysantin.bsky.social · 10/10/2026
Really nice Adrià 😉
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Yoann Santin @ysantin.bsky.social · 07/10/2026
Dear colleagues, I am delighted to announce that the team’s website is now live santinlab.weebly.com 🥳🥳 I would also like to take this opportunity to let you know that, I am recruiting a junior postdoc to start on 1 January 2027. For further information, please feel free to contact me.
santinlab.weebly.com
Santin Lab
Home page of the Santin Lab website.
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Cascales Lab @cascaleslab.bsky.social · 11/09/2026
New paper in Current Biology @currentbiology.bsky.social 🦠 Why do bacteria ditch their T6SS weapon? E. coli keeps it vs susceptible rivals, but loses it when facing immune ones. Great work by @bobytaillefer.bsky.social & Jonas Desjardins! www.cell.com/current-biol...
cell.com
Experimental evolution reveals genetic routes for adaptive loss of the antibacterial type VI secretion system
Taillefer et al. show that a bacterial type VI secretion system is lost or attenuated during experimental evolution when it provides no competitive advantage but is maintained in the presence of susce...
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Cascales Lab @cascaleslab.bsky.social · 07/08/2026
Happy to share our latest review on the "Structure and function of the #T9SS for protein secretion and cellular motility" to be published in the incoming volume 80 of Annual Review in Microbiology. Kudos to Yaelle Aouizerate and @thicoz.bsky.social ! www.annualreviews.org/content/jour...
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Pilhofer Lab 🦠❄️🔬 @pilhoferlab.bsky.social · 06/08/2026
Come join us at ETH!
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Nature Reviews Microbiology @natrevmicro.nature.com · 08/05/2026
New online! Predation in microbial communities: gradients of nutritive killing
dlvr.it
Predation in microbial communities: gradients of nutritive killing
Nature Reviews Microbiology, Published online: 08 May 2026; doi:10.1038/s41579-026-01299-7In this Review, Vasse and Velicer explore the phylogenetic and functional diversity of predators of microorganisms, conceptualizing the forms of microbial predation along gradients, including gradients of evolutionary adaptedness for predation and privatization of prey-derived nutrients.
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Yoann Santin @ysantin.bsky.social · 29/07/2026
Merci Anne !!
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François Rousset @francoisrousset.bsky.social · 16/07/2026
THE new lab to follow ! Amazing science with an amazing person, seems like a unique opportunity 🤩
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Ariane Briegel @arianebriegel.bsky.social · 16/07/2026
research.pasteur.fr/en/call/mid-...
research.pasteur.fr
Mid-career Group Leader position in Chemistry for Health at Institut Pasteur, Paris - Research
Institut Pasteur and the CNRS are launching a joint call for a mid-career group leader position in Medicinal Chemistry and Chemistry for Health. We are looking for an experienced researcher (typically...
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Tanmay Bharat @tbharat-lab.bsky.social · 15/07/2026
Structural basis of biofilm formation mediated by the Pseudomonas aeruginosa fibrillar adhesin CdrA led by @olivia--smith.bsky.social Collaboration with @alexbateman1.bsky.social , Andres Floto and @geiselbiofilm.bsky.social labs
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Osterman Ilya @ostermanilya.bsky.social · 13/07/2026
🚨 We're hiring! My new lab at EMBL Hamburg is looking for a Research Technician. I'm looking for someone excited by phages, metabolism, enzymes, structural biology and bacterial immunity—if you know the right person, please share this post!🧵⬇️ Apply here: embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
embl.wd103.myworkdayjobs.com
Research Technician (Osterman Group – Metabolism-driven immunity)
EMBL Hamburg / CSSB The European Molecular Biology Laboratory (EMBL) is Europe’s flagship life sciences organization, with more than 110 independent research groups across Heidelberg, Hamburg, Grenobl...
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Patricia Bernal @pbernalt6ss.eurosky.social · 11/07/2026
Fresh out of the lab! Our new preprint is now up on BioRxiv, exploring how the beneficial bacterium Pseudomonas putida controls its T6SS nanoweapon. It turns out the Gac/Rsm pathway acts as a strict molecular brake on the system. 👇 (1/4) Read the full preprint here: doi.org/10.64898/202...
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STCmicrobeblog @stcmicrobeblog.bsky.social · 09/07/2026
#MicroSky
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Coralie Tesseur @coralietesseur.bsky.social · 09/07/2026
So excited to share our new preprint! 🎉🤩 Check it out to discover how we investigated the role and spatiotemporal dynamics of an essential Tad nanomachine during the lifecycle of our favorite bacterial predator, B.bacteriovorus 🦠 Many thanks to everyone who made this work possible!
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LabEx ParaFrap @parafrap.bsky.social · 09/07/2026
📢 Looking for institutional support for an ERC or SNSF Starting Grant? The University of Geneva is inviting applications from outstanding junior researchers in host–pathogen interactions, bacteriology, virology, parasitology and mycology. 🔗 www.unige.ch/medecine/mim...
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Yoann Santin @ysantin.bsky.social · 09/07/2026
Our new preprint is out ! #Predatory bacteria & #TAD nanomachine !! Huge work from @coralietesseur.bsky.social 🤩
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Faculté de biologie et de médecine @fbm-unil.bsky.social · 07/07/2026
🔬 Rencontre avec @navarropaula.bsky.social, pour qui les secrets du vivant se cachent à l’échelle atomique. Pour explorer cet univers minuscule, la biologiste s’appuie sur la #cryo-microscopie #électronique. Lire la suite 👉 www.unil.ch/news/fr/1783...
unil.ch
Lausanne, Terre promise de la cryo-microscopie électronique
Pour Paula Navarro, les secrets du vivant se cachent à l’échelle atomique. Pour explorer cet univers minuscule, la biologiste s’appuie sur la cryo-microscopie électronique. Et s’il y a un endroit où p...
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Xavier Charpentier @labxc.bsky.social · 07/07/2026
#microsky New preprint from the lab! Widespread immune systems protect bacteria against conjugative plasmids www.biorxiv.org/content/10.6... Kudos to the extremely talented lead author Ludovic Poiré! Key contributions by @francoisrousset.bsky.social and also help from C. Lesterlin/TacC lab. 🧵⬇️
biorxiv.org
Widespread immune systems protect bacteria against conjugative plasmids
Conjugative plasmids are a class of mobile genetic elements capable of efficient transfer between bacterial cells. Although they can introduce beneficial traits such as antibiotic resistance to recipi...
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Andrea Vettiger @avettiger.bsky.social · 03/07/2026
Excited to see our story published in @natmicrobiol.nature.com today! It’s been a long journey. We answered a major outstanding question: why does E. coli encode two aPBPs, yet only one plays a critical role in ensuring reliable PG fortification during cell division?
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Yoann Santin @ysantin.bsky.social · 06/07/2026
Congrats Andrea !
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Melanie Blokesch @mblokesch.bsky.social · 29/03/2026
Open postdoc position in my lab on HGT and interbacterial competition. We seek candidates with a PhD in microbiology (or related fields)+ strong 1st-author publications. Curious, highly motivated, and dedicated team players ready to contribute fully are encouraged to apply. Details: tiny.cc/cz01101
tiny.cc
Open Positions
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Benjamin Ezraty @ben-ezraty.bsky.social · 03/06/2026
More than a century after the discovery of catalase, the enzyme responsible for the degradation of hydrogen peroxide, we are proud to report the discovery of a new antioxidant enzyme capable of degrading urate hydroperoxide and to demonstrate its physiological importance in vivo. #microsky
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The EMBO Journal @embojournal.org · 29/06/2026
Substrate-induced assembly and functional mechanism of the membrane protein insertase SecYEG-YidC @kedrov-lab.bsky.social, Roland Beckmann and coworkers link.springer.com/article/10.1...
link.springer.com
Substrate-induced assembly and functional mechanism of the membrane protein insertase SecYEG-YidC - The EMBO Journal
The Sec translocon and the YidC/Oxa1-type insertases universally mediate biogenesis of α-helical membrane proteins, but the molecular basis of their cooperation has remained disputed. Recent discovery...
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Yoann Santin @ysantin.bsky.social · 29/06/2026
Because good news apparently likes company, I’m very happy to share that I have been recruited as a #CNRS researcher! 🎉😀 Huge thanks to everyone who supported me along the way! A new chapter starts now 🥳🤩
static.klipy.com
Happy Dance
ALT: Happy Dance
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Daan Speth @daanspeth.bsky.social · 26/06/2026
I'm happy to announce the release of GlobDB r232! This version contains 346,233 bacterial and archaeal genomes, based on 26 datasets. More info globdb.org 🦠🖥️🧬
globdb.org
home | GlobDB
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Scott Coyle @cellraiser.bsky.social · 24/06/2026
@zjmaggiexu.bsky.social's story on suctorian trap structure adaptation is now online in @currentbiology.bsky.social , with new evolutionary analyses and modeling! This fall, Maggie will keep exploring predatory protists as a PD in @nbellono.bsky.social group; keep an eye out for her she's amazing!
sciencedirect.com
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Tracy Palmer @proftracypalmer.bsky.social · 24/06/2026
Check out our latest T7SS toxin story. These reverse toxins aren’t as rare as we thought!
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Yoann Santin @ysantin.bsky.social · 24/06/2026
Absolutely thrilled to share that I’ve been awarded an #ATIP-Avenir2026 Starting Grant to launch my own research team in Toulouse, starting January 1st, 2027 🎉 We’ll be diving into how one bacterium vampirizes another through a specialized cell-cell interface 🧛‍♂️ Stay tuned! more exciting news soon !
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Christophe Zimmer @chzimmer.bsky.social · 18/06/2026
Open postdoc position in the Imaging and Modeling Unit at Institut Pasteur, in collaboration with Mickaël Cohen of IBPC (Paris, France). High-throughput imaging and deep learning to analyze mitochondrial morphology and understand genetic bases of cellular respiration. Please spread the word.
postdoc position at Institut Pasteur and IBPC to work on mitochondrial morphology using advanced imaging and deep learning
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Cascales Lab @cascaleslab.bsky.social · 18/06/2026
Extension of the deadline for latecomers. Register to the Secretion Days in Marseille !
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Susan Lea @smlea.bsky.social · 16/06/2026
A lot of work, over many years, and we finally see the missing piece at the heart of type 3 export!
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microPublication Biology @micropub7n.bsky.social · 16/06/2026
Cryo-electron tomography reveals OmpB is required for the Rickettsia parkeri S-layer #micropublication #biology #data #caltechlibrary #Other #StructuralBiologyData #ModelsOfHumanDisease #NewFinding #R micropublication.org/journals/biolo…
Figure 1
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BejaLabTechnion @bejalab.bsky.social · 17/06/2026
Spatial structure: shaping the ecology and evolution of microbial communities academic.oup.com/femsre/artic...
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Cees Dekker @ceesdekker.bsky.social · 17/06/2026
Latest #CDlab paper on BioRxiv: 'Charge and steric hindrance in the glycocalyx govern membrane interactions': www.biorxiv.org/content/10.6... Led by Rafa De Lira, we study how the molecules from the carbohydrate-rich layer that coats cells governs interactions and fusion with charged liposomes.
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Emmanuele Severi @emmseveri.bsky.social · 17/06/2026
#microsky and kinda #phagesky www.nature.com/articles/s41...
nature.com
Structure of a contractile injection system in Salmonella enterica subsp. salamae - Nature Communications
Contractile injection systems (CISs) are nanomachines that inject proteins into target cells. Here, the authors resolve the atomic structure of a CIS in the opportunistic human pathogen Salmonella ent...
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Eugene Katrukha 🇺🇦 @ekatrukha.bsky.social · 16/06/2026
With a motivating push from @christlet.bsky.social I made a new Fiji plugin, CurveMorph. The idea was to create a tool for kymograph generation along the dynamic (bending/shaking) filament shapes (microtubules, cilia, neurites, etc). The logo was made using the plugin. github.com/UU-cellbiolo...
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Oli Clarke @olibclarke.bsky.social · 11/06/2026
The results here re 3D classification are quite impressive. Would be interesting to see how much the LPP improves classification of near-native samples with extreme compositional heterogeneity (e.g. derived from cellular fractions)
science.org
Laser phase plate improves structure determination of small proteins by cryo-EM
Phase plates can in principle overcome the poor image contrast in electron cryo–microscopy (cryo-EM) and the resulting limits on the structural reconstruction of small proteins. However, previous desi...
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CNRS @cnrs.fr · 09/06/2026
#RejoignezLeCNRS 🫵 Le CNRS recrute 356 postes à pourvoir dans des domaines variés. Jusqu'au 9 juillet 2026 à 13h, inscrivez-vous aux concours externes et rejoignez une institution d’excellence acteur du progrès scientifique et technologique. 👉 carrieres.cnrs.fr/concours-ext...
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Lara Krüger @lara-kruger.bsky.social · 09/06/2026
📢 We are looking for a Junior Group Leader to join us at @institutcurie.bsky.social! Having joined the department just over a year ago, I can honestly say that it is an exceptionally stimulating and supportive scientific environment, filled with outstanding colleagues — all in the heart of Paris.
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Cascales Lab @cascaleslab.bsky.social · 08/06/2026
Happy to share the last publication of @bobytaillefer.bsky.social, showing that #T6SS heterogeneity is an attenuation strategy to optimizes the trade-off between competitive killing and survival.
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Maxence Vincent @maxencevincent.bsky.social · 03/06/2026
👇👇👇 NEW PREPRINT ONLINE 👇👇👇 www.biorxiv.org/content/10.6... #NewPreprint #Microbiology #Inflammation #GutMicrobiome
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Cascales Lab @cascaleslab.bsky.social · 05/06/2026
Happy to share the last work of Jonas Desjardins, identifying and characterizing a novel Rhs NAD(P) glycohydrolase delivered by the #T6SS of the major cosmetic contaminant, Pluralibacter gergoviae. www.jbc.org/article/S002...
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PLOS Biology @plosbiology.org · 05/06/2026
The T6SS is a widespread nanoweapon deployed by #bacteria, but why is it deployed heterogeneously? @cascaleslab.bsky.social &co show that #Ecoli adopt distinct #T6SS attacker "ON" & defender "OFF" roles to optimize survival, a key strategy in microbial warfare @plosbiology.org 🧪 plos.io/3S5dL45
Top: Representative confocal fields of the 3 types of TssC-GFP-TssK microcolonies (homogeneous ON, heterogeneous, homogeneous OFF). Scale bars, 10 μm. Bottom:  Model for the role of T6SS phenotypic heterogeneity in EAEC. Top: The Psci1 promoter integrates Fur- and Dam-dependent regulation, generating ON (T6SS⁺, yellow) and OFF (T6SS⁻, blue) subpopulations at a reversible equilibrium. Bottom left: OFF (blue) cells, which do not express T6SS, do not kill competitors but avoid triggering such defences (1). Due to the absence of killing activity, OFF cells are unable to colonize the niche (2). Bottom centre: While ON (yellow) cells assemble and deploy functional T6SS (1) and kill susceptible competitors (2), they provoke retaliatory attacks from defensive T6SS⁺ species (gray) and are eliminated and fail to colonize the niche (3). Bottom right: Heterogeneous ON/OFF population (1) optimizes colonization by killing neighboring cells (2). While ON (yellow) cells are eliminated by counterattacks by defensive T6SS+ species (gray), OFF (blue) cells resist (3) and can ensure a continuous supply of ON cells (4-5) while limiting population-wide exposure to retaliation.
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Zeynep Baharoglu @zeynepbaharoglu.bsky.social · 30/05/2026
Decoding universal principles of codon-mediated regulation of gene expression => model "codon weights" from transcriptomic data, for prediction of mRNA/prot abundance & expmtal validatn💫 "species-specific environments for gene expression are encoded in codon weights" www.biorxiv.org/content/10.6...
biorxiv.org
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Patricia Bernal @pbernalt6ss.eurosky.social · 31/05/2026
Excessive paperwork and inefficient systems are sabotaging scientific progress. Really proud to be part of this global manifesto spearheaded by @kentimmis.bsky.social. We need action at all levels to tackle the root causes. Our analysis & proposals @microbiotech.bsky.social: doi.org/10.1111/1751...
doi.org
Scientists' Warning to Humanity: Unnecessary Bureaucracy Is a Global Impediment to Productivity, Advancement of Human and Planetary Wellbeing, Science and Sustainability
Unnecessary bureaucracy is a global impediment to progress and productivity that increases stress and lowers workplace morale and motivation. In research it smothers creativity and innovation that ar....
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Nature @nature.com · 29/05/2026
Catalogue entries for more than 100 antibodies sold by the research services and supply company Thermo Fisher Scientific contain images that have apparently been manipulated, according to a pair of science sleuths. go.nature.com/4wX4yej
go.nature.com
Science sleuths uncover more than 100 suspicious images in Thermo Fisher antibody catalogue
Scientists have long worried about the reliability of commercial antibodies, and the latest findings have sparked fresh concerns.
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Kumaran Ramamurthi @ramamurthilab.bsky.social · 29/05/2026
Bacterial transmembrane proteins usually localize inside the cell by "finding" a pre-localized protein, but how did the 1st protein get there? @vanipande.bsky.social found a protein in #B.subtilis that localizes by recognizing a *lipid* localization cue. #Microsky www.biorxiv.org/content/10.6...
biorxiv.org
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Olaya Rendueles @olayarendueles.bsky.social · 19/05/2026
🔬🦠 Comment #Klebsiella parvient-elle à changer de capsule aussi fréquemment pour mieux s’adapter à son environnement ? Les travaux de @julielebris.bsky.social mis à la une par @cnrsbiologie.bsky.social 👏 -avec @epcrocha.bsky.social #MicroSky @cbitoulouse.bsky.social
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