Sign in

Dr Radu Zabet

@raduzabet.bsky.social
3K followers 2.9K following 237 posts

Group Leader - Reader (Assoc. Professor) in AI and Cancer Epigenetics at Blizard Institute, Queen Mary University of London. #GeneRegulation, #Chromatin, #Epigenetics, #AI, #bioinformatics www.qmul.ac.uk/blizard/all-staff/pr…

PostsRepliesMedia
Dr Radu Zabet @raduzabet.bsky.social · 28/09/2026
Thank you Chris and @usociety.bsky.social for doing this podcast on our recent work on inter individual variation of DNA methylation in the British population link.springer.com/article/10.1.... This was my first podcast and really enjoyed the experience.
link.springer.com
Systematic investigation of interindividual variation of DNA methylation in human whole blood - Genome Biology
Background Interindividual genetic variability is well characterised, but we still lack a complete catalogue of loci displaying variable and stable epigenetic patterns. Results Here, we report a catal...
031
Dr Radu Zabet @raduzabet.bsky.social · 15/09/2026
🎉Excited to share the latest paper from my lab, where we developed a new framework to investigate DNA methylation at single-molecule resolution using @oxfordnanopore.bsky.social (ONT) long read sequencing. Work spearheaded by a very talented student Young Jun Kim. www.biorxiv.org/content/10.6... 1/n
biorxiv.org
A Framework for Quantifying DNA Methylation Heterogeneity and Detecting Co-methylated loci from Native Nanopore Sequencing
DNA methylation is an important epigenetic mechanism involved in gene regulation. Most methods focus on analysing DNA methylation averaged from multiple reads, yet these average methylation profiles o...
2269
Dr Radu Zabet @raduzabet.bsky.social · 14/09/2026
Great lab and excellent project. Highly recommend
012
Dr Radu Zabet @raduzabet.bsky.social · 11/09/2026
Happy to share the peer-reviewed version of this manuscript now published in Bioinformatics Journal. Briefly, we developed HiCPotts, a novel method to better detect 3D DNA contacts from HiC/microC data. doi.org/10.1093/bioi... bioconductor.org/packages/HiC... For a summary, see original post.
doi.org
0159
Reposted by Dr Radu Zabet
Biochemical Society @biochemsoc.bsky.social · 17/08/2026
Transcription & Chromatin UK returns 18–20 November 2026. Explore the latest breakthroughs in transcription, epigenetics and 3D genome organisation. Save £100 with Super Early Booking by 18 August. Don’t miss out! ow.ly/CnIU50ZAbnV
083
Reposted by Dr Radu Zabet
ICMB2026 @icmb2025.bsky.social · 27/06/2026
Please welcome Dr. Radu Zabet! He graduated at Politehnica University of Bucharest and completed his PhD in Computer Science at Kent. His research focused on the application of genomics, computer science, and physics to study gene regulatory networks. Check more details about Dr. Zabet below🚀
041
Dr Radu Zabet @raduzabet.bsky.social · 16/06/2026
🚨 Excited to share the latest work from my lab “Explainable AI identifies H3K18ac as a new marker of active enhancers” www.biorxiv.org/content/10.6.... Spearheaded by the amazing Khizra Maqsood and Duarte Pólvora-Brandão with contributions from Jareth, Bhavana, Catalin, Roxana, Olivia and Fanny. 1/n
1135
Dr Radu Zabet @raduzabet.bsky.social · 28/05/2026
🚨 Excited to share a new manuscript from the lab. Here, we have developed a new method, HiCPotts, to identify significant interactions in 3D chromatin data www.biorxiv.org/content/10.6...; package bioconductor.org/packages/HiC.... Big shoutout to an amazing previous PhD in the lab Godwin. 1/n
12914
Reposted by Dr Radu Zabet
Chema Martin @chemamd.bsky.social · 19/05/2026
🚨 We discovered a new mode of Hox gene regulation in annelids! 🪱 A distal enhancer acts as a "global control region", lifting Hox genes from Polycomb repression. This is reminiscent of Hox gene control in vertebrates, but the two modes likely evolved convergently. www.biorxiv.org/content/10.6...
313655
Dr Radu Zabet @raduzabet.bsky.social · 27/04/2026
Checkout the latest paper from @smarino0111.bsky.social on cerebellar organoids as models of medulloblastoma initiation. Happy to have contributed to this story as part of our long term collaboration with Silvia including within the BTR Centre for Excellence @braintumourrsch.bsky.social
031
Dr Radu Zabet @raduzabet.bsky.social · 24/04/2026
If you want to read more about our recent work on how gene body methylation buffers noise in gene expression academic.oup.com/nar/article/... , @jamespblloyd.bsky.social has a excellent spotlight in @cp-trendsgenetics.bsky.social.
academic.oup.com
Gene body methylation buffers noise in gene expression in plants
Abstract. Non-genetic variability in gene expression is an inevitable consequence of the stochastic nature of processes driving transcription and translati
0187
Reposted by Dr Radu Zabet
Silvia Marino @smarino0111.bsky.social · 14/04/2026
Two postdocs, one mainly computational and one mainly wet lab, will be joining us on a collaborative project between my lab and Radu Zabet lab exploring deregulation of enhancers in glioblastoma @blizardinstitute.bsky.social @qmul.bsky.social Check out the advert and apply!
021
Dr Radu Zabet @raduzabet.bsky.social · 10/04/2026
My lab and @smarino0111.bsky.social lab are currently looking for 2 PDRAs on a 3-year @bartscharity.bsky.social funded project. The posts will be based in Blizard Institute within Queen Mary Faculty of Medicine and Dentistry. Check out the details and apply here: qmul-jobs.tal.net/vx/mobile-0/...
qmul-jobs.tal.net
124
Reposted by Dr Radu Zabet
Mike Inouye @mikeinouye.bsky.social · 11/03/2026
The BHF PhD programme has 10 studentships now recruiting at the Universities of Cambridge, Edinburgh, Oxford & Imperial College! www.cam.ac.uk/jobs/bhf-4-y... Cambridge has 5 studentships available. Check us out here: www.phpc.cam.ac.uk/research/dep... Plz RT and feel free to get in touch!
cam.ac.uk
BHF 4-Year PhD Studentships in Cardiovascular Disease Prevention
University of Cambridge, University of Edinburgh, Imperial College London and University of Oxford Applications are invited for up to 10 funded 4-year PhD studentships starting in October 2026, as
043
Reposted by Dr Radu Zabet
Maxim Greenberg @maxvcg.bsky.social · 09/03/2026
Very excited to announce the FIRST symposium on epigenome editing! These tools are becoming widely used in mol bio, ag & therapy. It's time to bring leaders together to discuss this rapidly growing and exciting field. And why not in Paris! Please register & share! (1/2) ctrlepiedit.sciencesconf.org
Flyer for symposium: https://ctrlepiedit.sciencesconf.org/
38758
Reposted by Dr Radu Zabet
Mick Milsom @milsommick.bsky.social · 06/03/2026
Abstract submission for the Mol Hem Workshop is now open here ehaweb.org/connect-netw... Submit for your chance to present your latest unpublished work in a highly visible session that forms part of the EHA annual meeting program in Stockholm.
ehaweb.org
EHA2026 Molecular Hematopoiesis Workshop - The European Hematology Association (EHA)
076
Dr Radu Zabet @raduzabet.bsky.social · 05/03/2026
Excited to share our latest publication on interindividual variation of DNA methylation in human whole blood, spearheaded by the amazing Olivia Grant and co-led with @leo-schalkwyk.bsky.social and Meena Kumari. link.springer.com/article/10.1...
link.springer.com
Systematic investigation of interindividual variation of DNA methylation in human whole blood - Genome Biology
Background Interindividual genetic variability is well characterised, but we still lack a complete catalogue of loci displaying variable and stable epigenetic patterns. Results Here, we report a catal...
22110
Reposted by Dr Radu Zabet
Hassan Salem @hassansalem.bsky.social · 04/03/2026
Join @berasymbionts.bsky.social , @tatsuyanobori.bsky.social and us for a postdoc on the remarkable developmental biology of symbiosis! Applications are due March 25th 🪲🦠 @johninnescentre.bsky.social @thesainsburylab.bsky.social
03744
Reposted by Dr Radu Zabet
Allan Carrillo-Baltodano @allancarbal.bsky.social · 04/03/2026
New from @chemamd.bsky.social lab @qmulsbbs.bsky.social Collab with Elaine Seaver, @baxevanislab.bsky.social @neva-meyer.bsky.social @abhinavsur.bsky.social New chromosome-level assembly for Capitella teleta 🪱 academic.oup.com/gbe/advance-... #DevBio #WormWednesday @genomebiolevol.bsky.social
Figure showing 3 panels,(A) a picture of annelid Capitella teleta on black background, (B) a cladogram with major biological model organisms showing the phylogenetic position of C. teleta and (C) schematics of the 10 chromosomes of C. teleta
02715
Reposted by Dr Radu Zabet
Antonio Scialdone @antonio-scialdone.bsky.social · 03/03/2026
Transposable elements are increasingly studied in single-cell data, but how reliable are current locus-level quantification methods in short-read scRNA-seq data? If you work with single-cell RNA-seq or TEs, we hope this is a useful resource — feedback very welcome!
1146
Reposted by Dr Radu Zabet
Abiotic Stress in Plants @abioticstress.bsky.social · 03/03/2026
A plant #histone H3.3-specific #amino acid safeguards the deposition of H3K36 #methylation for proper #development and #stress responses www.cell.com/developmenta... #PlantScience #SciComm @cp-devcell.bsky.social @epigeneticspod.bsky.social @epigenometech.bsky.social @histone3.bsky.social
cell.com
A plant histone H3.3-specific amino acid safeguards the deposition of H3K36 methylation for proper development and stress responses
Plant histone variant H3.3 uniquely carries T31 rather than the S31 found in animals. Li et al. demonstrate that T31 prevents plant-specific ATXR5/6-mediated H3K27me1 deposition, which would otherwise...
064
Reposted by Dr Radu Zabet
Christopher Thomas @ovarylab.bsky.social · 04/03/2026
We are one of the potential host labs for a Lecturer position in Molecular Genetics & Genomics — please share, and get in touch for more info! 🧬📣
02122
Reposted by Dr Radu Zabet
Hallou Lab @halloulab.bsky.social · 02/03/2026
🚨3-year Postdoc Position @halloulab.bsky.social (Kennedy Institute, Oxford) - on Spatial Biology & Bioinformatics of Fibrosis🚨 An exciting project combining #SpatialTranscriptomics & #Mechanobiology👇: shorturl.at/LLS5r Deadline: 16 March - Please RT 📢! @kiroxford.bsky.social @ox.ac.uk
02218
Reposted by Dr Radu Zabet
Giles Yeo @gilesyeo.bsky.social · 04/03/2026
March 4th is world obesity day. Obesity is a chronic relapsing disease and is not a choice. #obesityisnotachoice
0103
Reposted by Dr Radu Zabet
Kurianlab @kurianlab.bsky.social · 28/02/2026
www.cell.com/cell/fulltex...
cell.com
Giant DNA viruses encode a hallmark translation initiation complex of eukaryotic life
Giant DNA viruses encode a cap-binding complex homologous to eIF4F, the defining translation-initiation complex of eukaryotes. The viral cap-binding complex is required for viral protein synthesis and...
093
Reposted by Dr Radu Zabet
Takashi Fukaya @fukayalab.bsky.social · 27/02/2026
Diving into evolutionary biology! What is the origin of the most abundant class of insect transcription factors, ZAD-ZnFs? We suggest that they evolved from ancestral insulator-binding proteins that control 3D genome topology. www.science.org/doi/10.1126/...
science.org
Decoding the molecular logic of rapidly evolving ZAD zinc finger proteins in Drosophila
Identification of ZAD-ZnF genes as key regulators of genome organization during Drosophila embryogenesis.
03315
Reposted by Dr Radu Zabet
#SingleCell preprints @prepub-singlecell.bsky.social · 26/02/2026
Domain-adaptation deep learning models do not outperform simple baseline models in single-cell anti-cancer drug sensitivity prediction #SingleCell 🧪🧬🖥️ www.biorxiv.org/content/10.64898/20…
001
Reposted by Dr Radu Zabet
Lori Passmore @lapassmore.bsky.social · 25/02/2026
We are excited to be recruiting a new tenure track group leader in the Structural Studies Division at MRC LMB! It is an amazing place to start your own lab. @mrclmb.bsky.social Please get in touch if you have any questions. www.nature.com/naturecareer...
nature.com
Research Group Leader Tenure Track - Structural Studies - LMB 2775 - Cambridge, Cambridgeshire (GB) job with MRC Laboratory of Molecular Biology (LMB) | 12854636
Research Group Leader Tenure Track Starting Salary £67,979 to £76,868 per annum MRC Laboratory of Molecular Biology, Cambridge, UK The MRC Laborato...
15254
Reposted by Dr Radu Zabet
Thiago Carvalho @cyrilpedia.bsky.social · 26/02/2026
'We show that histone butyrylation on H3K27 is detected in human colon samples. Furthermore, histone acetylation, butyrylation, and propionylation on H3K9 and H3K27 are responsive to levels of SCFAs in human colon cancer cell lines and are associated with active gene regulatory elements.' #preprint
biorxiv.org
054
Reposted by Dr Radu Zabet
Carolyn Bertozzi @carolynbertozzi.bskyverified.social · 25/02/2026
Fascinating discovery by team @stanfordbiosci.bsky.social www.cell.com/cell/abstrac...
cell.com
Nutrient competition predicts gut microbiome restructuring under drug perturbations
Systematic profiling of 707 drugs on their impact on stool-derived microbial communities shows that nutrient competition explains and predicts species shifts under drug treatment and that post-drug re...
03212
Reposted by Dr Radu Zabet
David W. Sanders! @davidwsanders.bsky.social · 25/02/2026
The function of nuclear speckles is revealed! This is an incredibly important paper with absolutely beautiful data! Wow! www.cell.com/cell/fulltex...
cell.com
Nuclear speckles enable processing of RNA from GC-rich isochores
Nuclear speckles are key subnuclear structures that regulate gene expression in GC-rich regions. This work shows that the evolution and expansion of core speckle proteins were crucial for the increase...
13815
Reposted by Dr Radu Zabet
jobRxiv @jobrxiv.org · 25/02/2026
Karolinska Institute is hiring for 7 new positions! Individual job details below!👇 #ScienceJobs
Image
515
Reposted by Dr Radu Zabet
MRC Laboratory of Molecular Biology @mrclmb.ac.uk · 24/02/2026
Are you a structural biologist pushing the boundaries of molecular science with an ambitious research programme? Join our Structural Studies Division as a tenure-track Group Leader, with core funding, world-leading facilities & enthusiastic colleagues. Apply by 16 MAR www.nature.com/naturecareer...
Job opening for Research Group Leader in Structural Studies at MRC Laboratory of Molecular Biology, focusing on macromolecular structures.
03648
Reposted by Dr Radu Zabet
Max Haase @maxhaase.bsky.social · 18/02/2026
Our paper is now out in Nature: “Ancient co-option of LTR retrotransposons as yeast centromeres” www.nature.com/articles/s41... A short thread on how retrotransposons helped give rise to yeast point centromeres. 1/14
nature.com
Ancient co-option of LTR retrotransposons as yeast centromeres - Nature
Evolutionarily related ‘proto-point’ centromeres providing resolution to the evolutionary origins of point centromeres are identified in yeast, and comparison shows they evolved in an ancestor with re...
9236119
Reposted by Dr Radu Zabet
bioRxiv Genomics @biorxiv-genomic.bsky.social · 19/02/2026
Regulatory Features and Functional Specialization of Human Endogenous Retroviral LTRs: A Genome-Wide Annotation and Analysis via HERVarium www.biorxiv.org/content/10.64898/20…
033
Dr Radu Zabet @raduzabet.bsky.social · 17/02/2026
Hot off the press, our latest publication on the functional role of gene body methylation (gBM). academic.oup.com/nar/article/... Work spearheaded by Jakub Zastapilo with help from @robynemm.bsky.social and Liudmila Mikheeva and co-led by Marco Catoni and @ubechtold.bsky.social 1/3
academic.oup.com
Gene body methylation buffers noise in gene expression in plants
Abstract. Non-genetic variability in gene expression is an inevitable consequence of the stochastic nature of processes driving transcription and translati
21611
Reposted by Dr Radu Zabet
Kresten Lindorff-Larsen @lindorfflarsen.bsky.social · 07/02/2026
A near-complete map of human cytosolic degrons and their relevance for disease We measured degron potency of >200,000 30-residue tiles from >5,000 human proteins, and trained a model to predict degrons from sequence Led by @vvouts.bsky.social in @rhp-lab.bsky.social doi.org/10.1126/scia...
05217
Dr Radu Zabet @raduzabet.bsky.social · 06/02/2026
Highly recommend! Great lab and project.
032
Reposted by Dr Radu Zabet
Marnie Blewitt @marnieblewitt.bsky.social · 06/02/2026
Our new preprint on SMCHD1! We’ve shown SMCHD1’s ATPase activity is critical for function in vivo, and excitingly a new DNA binding domain neighbouring the ATPase domain activates the enzymatic function, which is important for normal chromatin binding. urldefense.com/v3/__https:/...
13314
Reposted by Dr Radu Zabet
Fabian Theis @fabiantheis.bsky.social · 05/02/2026
CellRank protocol now in @NatureProtocols! 🎉 @PhilippWeiler's detailed guide shows how to: - Integrate velocity, pseudotime & time points - Infer cell fate probabilities - Analyze lineage priming at scale Great complement to our CellRank 2 paper! 📖 www.nature.com/articles/s41...
0239
Reposted by Dr Radu Zabet
Tamas Nagy @tamasnagy.com · 05/02/2026
Interesting study from *Anthropic* that found that AI use didn’t significantly speed up development on a novel task (w/ new Python async lib) but it did hurt understanding. Unsurprisingly, AI seems best at regurgitating common patterns and isn’t that helpful for novel ones. arxiv.org/pdf/2601.20245
arxiv.org
021
Reposted by Dr Radu Zabet
Netherlands Cancer Institute @nkinl.bsky.social · 04/02/2026
Out now in @natureportfolio.nature.com: PARM reveals gene regulation is far more predictable than thought. Lightweight, cell‑type specific, and experimentally validated. Enables functional prediction of regulatory mutations with just one dish of cells + one day of compute. ➡️ doi.org/10.1038/s415...
1113
Reposted by Dr Radu Zabet
Joshua Saldivar @saldivar-lab.bsky.social · 04/02/2026
I am excited to share the first paper from the Saldivar lab! A special thank you to all who contributed. Precise control of transcription condensates across S phase balances linker histone expression with DNA replication, ensuring genome stability: Molecular Cell www.cell.com/molecular-ce...
cell.com
Precise control of transcription condensates across S phase balances linker histone expression with DNA replication, ensuring genome stability
Marmolejo et al. uncover transcription condensate dynamics at histone locus bodies across the cell cycle. These dynamics are governed by cell cycle (DDK and CDK1/2) and checkpoint (ATR-CHK1) kinases t...
03816
Reposted by Dr Radu Zabet
Thiago Carvalho @cyrilpedia.bsky.social · 04/02/2026
'The Centre for Research in Cellular Biology of Montpellier (CRBM) is recruiting Junior/Senior Group Leaders to shape its research in the coming decade. The deadline for application is 31st of March 2026.' #sciencejobs focalplane.biologists.com/cell-biology...
focalplane.biologists.com
The Centre for Research in Cellular Biology of Montpellier (CRBM) is recruiting Junior / Senior Group Leaders - FocalPlane
The Centre for Research in Cellular Biology of Montpellier (CRBM) is recruiting Junior / Senior Group Leaders to shape its research in the coming decade
01412
Reposted by Dr Radu Zabet
Pradeepa Madapura @pradeepmadapura.bsky.social · 02/02/2026
Check out our new findings showing BRD4's role in preventing the premature activation of developmental transcription factors via #Polycomb, providing new mechanistic insights into the pathogenesis of neurodevelopmental disorder #CdLS #NDDs, #chromatinopathies www.biorxiv.org/content/10.6...
73714
Reposted by Dr Radu Zabet
Wendy Bickmore @wbickmor.bsky.social · 01/02/2026
At a time when the UK should be capitalising on its global reputation as a great place to do science, this is an enormous own goal. I am so sorry for all those who jobs are going to be impacted.
23728
Reposted by Dr Radu Zabet
#SingleCell preprints @prepub-singlecell.bsky.social · 01/02/2026
BRD4 represses developmental and neuronal genes through interactions with polycomb complexes #SingleCell 🧪🧬🖥️ www.biorxiv.org/content/10.64898/20…
021
Reposted by Dr Radu Zabet
Mark A. Hanson @hansonmark.bsky.social · 31/01/2026
Both MRC and BBSRC responsive modes now withdrawn until further notice. Existing applications unlikely to succeed (late 2025 round expecting 1-5% success rate). Listen, I get that UKRI wants to pivot. But killing both at once is devastating. Let's hope at least one opens by summer... #AcademicSky
researchprofessionalnews.com
MRC instructs grant review boards to slash funding rates - Research Professional News
Boards asked to recommend just three applications for funding, as BBSRC also suspends calls
42829
Reposted by Dr Radu Zabet
Karim-Jean Armache @kjarmache.bsky.social · 30/01/2026
MECHANISMS, EPIGENETICS, CHROMATIN and DISEASE! Amazing speakers, fun organizers (@ckadoch.bsky.social and I) and excellent venue! Just ~1 month until our Keystone Symposia on Epigenetics and Gene Regulation in Health and Disease! Join us! www.keystonesymposia.org/conferences/...
041