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Molecular Biology and Evolution

@molbioevol.bsky.social
2.4K followers 42 following 754 posts

MBE publishes fresh insights into the patterns and processes that impact the evolution of life at molecular levels. 🔗 academic.oup.com/mbe 🏠 @official-smbe.bsky.social 🤝 @genomebiolevol.bsky.social #evobio #molbio #science #biology #societyjournal

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Reposted by Molecular Biology and Evolution
Aida Andres @aidaandres.bsky.social · 21h
The latest from us on balancing selection, now in final version in MBE @molbioevol.bsky.social @official-smbe.bsky.social 🧬 🧪 #Popgen #EvolutionaryBiology
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Molecular Biology and Evolution @molbioevol.bsky.social · 19h
@euantheyoung.bsky.social et al. show that the role of life-history trade-offs in shaping estrogen receptor-positive breast cancer risk in European populations appears, at most, small. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
No genome-wide correlations and little shared genetic architecture between reproductive life-history traits and estrogen receptor-positive breast cancer risk
Abstract. Estrogen receptor-positive breast cancer (ER + BC) is one of the most prevalent cancers, but the evolutionary processes shaping genetic variation
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Reposted by Molecular Biology and Evolution
Pavel Payne @pavelpayne.bsky.social · 07/10/2026
Finally, my paper is out! It shows how bacteria can utilize their CRISPR immunity against transducing phages to turn them into "pollinators". This way bacteria can speed up their own adaptation through recombination by two orders of magnitude compared to mutations, and they do so when starving!
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/10/2026
Laumer, @prashantpsharma.bsky.social et al. examined the incidence of Pax family genes across chelicerate phylogeny and interrogated the expression and function of Pax2 and Pax6 homologs in the daddy-longlegs Phalangium opilio. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
MBE | Pax6 homologs are required for patterning both visual systems of the daddy-longlegs Phalangium opilio
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/10/2026
Authors on Bluesky @willaguado.bsky.social @evobioclio.bsky.social @erinvogel.bsky.social @amelinlab.bsky.social @spit-lab.bsky.social @gokcumenlab.bsky.social @petarpajic.bsky.social
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/10/2026
Aguado et al. investigate the salivary proline-rich protein gene family across 27 primate species to test whether dietary ecology has shaped the evolution of this locus. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
Multiscale structural evolution of proline-rich protein genes shapes primate salivary defenses
Abstract. Saliva forms the first biochemical interface with the environment, mediating dietary exposure and oral defense. Proline-rich proteins in saliva p
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Reposted by Molecular Biology and Evolution
Max Reuter @maxreuter.bsky.social · 07/10/2026
Our paper on detecting (or not) balancing selection is now out, in all its typeset beauty, in the October issue of @molbioevol.bsky.social: academic.oup.com/mbe/article/...
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/10/2026
@pavelpayne.bsky.social et al. show that bacterial herd immunity can promote homologous recombination, suggesting bacterial immune systems can shape molecular evolution not only by blocking infection but also by regulating genetic exchange 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio
academic.oup.com
Herd immunity underlies homologous recombination in stationary phase bacteria
Abstract. Homologous recombination is ubiquitous across evolution, generating variation through genetic reshuffling. Although bacteria lack meiotic recombi
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Reposted by Molecular Biology and Evolution
Institute of Science and Technology Austria (ISTA) @istaresearch.bsky.social · 01/10/2026
Do bacteria have sex? ISTA scientists @pavelpayne.bsky.social and Călin Guet have uncovered a process resembling sexual reproduction that occurs when the gut bacterium E. coli is close to starvation. Read more: ista.ac.at/en/news/bact...
ista.ac.at
Bacterial Immunity—or a Form of Sex?
How do bacteria adapt when resources run low? ISTA researchers have found that, under starvation stress, E. coli can use bacteriophages and CRISPR-Cas immunity to transfer and incorporate DNA, acceler...
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Reposted by Molecular Biology and Evolution
Pavel Payne @pavelpayne.bsky.social · 05/10/2026
I'm really excited to share my latest research paper with the world. It has been a long and bumpy road to finish this project and get it published, but finally, it is out!
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/10/2026
Congratulations Euan 👏
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Reposted by Molecular Biology and Evolution
Euan Angus Young @euantheyoung.bsky.social · 07/10/2026
Delighted to share that my final PhD chapter is now published in @molbioevol.bsky.social! 🤩 Read all about our study testing whether trade-offs can explain why genetic variants promoting breast cancer persist in populations: doi.org/10.1093/molb... 🧵
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Molecular Biology and Evolution @molbioevol.bsky.social · 06/10/2026
The October 2026 issue of MBE has launched - check in throughout the month for your regular dose of discoveries, methods, protocols, and reviews in molecular evolution. 🔗 academic.oup.com/mbe/issue/43... #societyjournal #evobio #molbio
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Molecular Biology and Evolution @molbioevol.bsky.social · 05/10/2026
This is great Romain, thank you for publishing your article in MBE
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Reposted by Molecular Biology and Evolution
romain derelle @rom12relle.bsky.social · 28/09/2026
Happy to share that our paper describing kamino, a new variant-calling tool, has been accepted for publication in MBE @molbioevol.bsky.social. Big thanks to @johnlees.bacpop.org and Leonid Chindelevitch. academic.oup.com/mbe/advance-...
academic.oup.com
Kamino: fast proteome-wide variant calling for amino acid phylogenomics
Abstract. Amino acid-based phylogenetics usually relies on first clustering and aligning orthologous proteins. This approach is powerful but computationall
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Molecular Biology and Evolution @molbioevol.bsky.social · 01/10/2026
Authors on Bluesky: @susanneppfeifer.bsky.social @vivaksoni.bsky.social
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Molecular Biology and Evolution @molbioevol.bsky.social · 01/10/2026
Heenkenda et al. inferred a population history of the rhesus macaque with substantial structure between Chinese and Indian populations, with a split time of ∼140k generations ago from an ancestral pop. of ∼65k individuals 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio #popgen
academic.oup.com
Inferring the demographic history of Chinese and Indian rhesus macaque (Macaca mulatta) populations from PacBio HiFi long-read sequencing data
Abstract. The rhesus macaque (Macaca mulatta) is one of the most widely used animal models in biomedical research, both as it resembles humans in key biolo
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Molecular Biology and Evolution @molbioevol.bsky.social · 01/10/2026
Noly et al. reveal that carbon metabolism unexpectedly modulates the haploid-diploid cycle of fission yeasts, suggesting that diversification of core metabolic functions may contribute to adaptation to environments with distinct sugar compositions 🔗 academic.oup.com/mbe/article/... #societyjournal
academic.oup.com
Evolutionary diversification of invertase paralogs couples carbon metabolism and sexual reproduction in fission yeasts
Abstract. Dynamic patterns of gene gain and loss play a major role in the diversification of eukaryotes, reflecting adaptation to a broad range of ecologic
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Molecular Biology and Evolution @molbioevol.bsky.social · 25/09/2026
Mies & @mathiesoniain.bsky.social demonstrate that while local ancestry inference recovers biologically meaningful signals in ancient genomes, results can be sensitive to the methods used for inference, particularly in complex regions. 🔗 doi.org/10.1093/molb... #societyjournal #humanevolution
doi.org
Local ancestry inference identifies robust evidence of selection in Neolithic Europe
Abstract. During the European Neolithic, migrating Anatolian farmers admixed with local hunter-gatherers, coinciding with major shifts in diet, environment
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Reposted by Molecular Biology and Evolution
scienceartnews.bsky.social @scienceartnews.bsky.social · 24/09/2026
@mmontonerin.bsky.social et al. propose that the Dpau Mega-NUMT may have been transferred to the nuclear genome prior to the radiation of the D. paulistorum semispecies and speculate that it may occur relatively frequently in nature due to balancing selection or an as yet unknown function.
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Molecular Biology and Evolution @molbioevol.bsky.social · 24/09/2026
Authors on Bluesky: @erikenbody.bsky.social @gwct.bio
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Molecular Biology and Evolution @molbioevol.bsky.social · 24/09/2026
A new MBE Protocol is now available - Mirchandani et al. present a step-by-step protocol for snpArcher, a workflow that takes raw sequencing reads and a reference genome and produces a joint VCF file suitable for popgen analysis. 🔗 academic.oup.com/mbe/article/... #societyjournal #protocol
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Molecular Biology and Evolution @molbioevol.bsky.social · 22/09/2026
Read more from Victoria Mullin and Ian Barnes, lead authors of the study, on how museum genomics is helping to uncover the scale of biodiversity loss: 🔗 smbe.short.gy/mbe2026bumbl...
smbe.short.gy
Victoria Mullin and Ian Barnes on the decline of bumblebees - and how museum genomics is tracking this process | Notion
Many conservation studies focus on counting individuals or tracking changes in species distributions to infer change. What does looking directly at genomic changes reveal about population dynamics tha...
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Molecular Biology and Evolution @molbioevol.bsky.social · 22/09/2026
Our new MBE Highlight focuses on the new study by @victoriaemullin.bsky.social et al. on the sharp decline in genetic diversity in Great Britain bumblebees. Museum collections reveal loss of genetic diversity in declining bumblebee populations 🔗 academic.oup.com/mbe/article/... #societyjournal
MBE Highlight: Museum collections reveal loss of genetic diversity in declining bumblebee populations
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Reposted by Molecular Biology and Evolution
Sandra Álvarez @sabifo4.bsky.social · 08/09/2026
Keen on learning how to use Bayesian model selection to test different hypotheses of diversification? 🦴🧬🕰️ Check our latest work in Molecular Biology and Evolution! academic.oup.com/mbe/article/... With @zihengyang.bsky.social, @phil-donoghue.bsky.social, and @mariodosreis.bsky.social 💫 (1/2)
academic.oup.com
On the origin of animals and placental mammals: a critique of literalist readings of the fossil record
Abstract. The fossil record is incomplete, as evidenced by the pervasive presence of ghost lineages throughout the Tree of Life. For example, across placen
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Reposted by Molecular Biology and Evolution
Tom Booth @boothicus.bsky.social · 21/09/2026
Ancient🧪🐝 Bee Gee-nomes. academic.oup.com/mbe/article/...
academic.oup.com
Museum specimens reveal the genomic consequences of long-term population decline in an insect pollinator
Abstract. Global insect pollinator populations are under threat, with reported declines attributed to increasing habitat loss, pesticide use, and disease.
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Molecular Biology and Evolution @molbioevol.bsky.social · 21/09/2026
@identitybydissent.bsky.social et al. analyze global invasions of persistently inbreeding ambrosia beetles; findings highlight the importance of outbreeding even when inbreeding is common in a species. 🔗 academic.oup.com/mbe/article/... 🖌️ Marianne Coquilleau #societyjournal #invasive
MBE | Ambrosia beetle invasions are structured by inbreeding, intraspecific hybridization, and bridgeheads

Schmidt and colleagues identify a single inbred lineage of shot-hole borers that has spread across three continents, but show that borers can also hybridise when males find their way into other brood galleries nearby. Artwork by Marianne Coquilleau.
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Reposted by Molecular Biology and Evolution
Victoria Mullin @victoriaemullin.bsky.social · 17/09/2026
A century of moss carder bee genomes. It's great to see this work published. Thanks to all our collaborators :)
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Molecular Biology and Evolution @molbioevol.bsky.social · 17/09/2026
Fang et al. propose a model in which extreme ecological transitions can disrupt ancestral mitonuclear coadaptation and promote the emergence of a new coadapted state through systemic nuclear compensation. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
Disruption of mitonuclear coadaptation and compensatory evolution after an extreme dietary shift in carnivorous butterflies
Abstract. Mitochondrial function depends on tight coordination between mitochondrial and nuclear genomes, which requires long-term coevolution to maintain
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Molecular Biology and Evolution @molbioevol.bsky.social · 17/09/2026
Carrasco, @christinatoft.bsky.social & @sfelena.bsky.social reveal host age structure is a major ecological driver of virulence evolution, shaping trade-offs between disease progression and severity and determining specialization vs. generalism. 🔗 academic.oup.com/mbe/article/... #societyjournal
academic.oup.com
Evolution of virulence of a plant RNA virus in developmental stage-structured host populations
Abstract. Natural host populations are age-structured, and developmental stages differ in susceptibility and within-host pathogen dynamics, potentially imp
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Molecular Biology and Evolution @molbioevol.bsky.social · 17/09/2026
This article is the focus of this month's MBE Highlight: Highlight: Museum collections reveal loss of genetic diversity in declining bumblebee populations 🔗 academic.oup.com/mbe/article/...
academic.oup.com
Highlight: Museum collections reveal loss of genetic diversity in declining bumblebee populations
Taking a car trip through the countryside is an experience starkly different from what it was a few decades ago: for one, windshields are increasingly devo
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Molecular Biology and Evolution @molbioevol.bsky.social · 17/09/2026
Authors and institutions on Bluesky: @victoriaemullin.bsky.social @ashwhiffin.bsky.social @andres-arce.bsky.social @nashalselection.bsky.social @jeffollerton.bsky.social @nhm-london.bsky.social @ipswichmuseums.bsky.social @colmuseums.bsky.social @morethanadodo.bsky.social @gavinbroad.bsky.social
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Molecular Biology and Evolution @molbioevol.bsky.social · 17/09/2026
Mullin et al. use WGS from 101 museum specimens of British/Irish moss carder bumblebees from 1894-2019 to reveal a dramatic drop in genetic diversity: ∼24.6% decrease in heterozygosity and a 2.86-fold increase in ROH 🔗 academic.oup.com/mbe/article/... 📷 Gavin Broad #societyjournal #naturalhistory
MBE | Museum specimens reveal the genomic consequences of long-term population decline in an insect pollinator

Photo: Gavin Broad
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Reposted by Molecular Biology and Evolution
Mercè Montoliu Nerín @mmontonerin.bsky.social · 16/09/2026
🧬 New paper out in @molbioevol.bsky.social ! 🪰 Combining long-read sequencing and microscopy, we discovered a remarkable Mega-NUMT in Drosophila paulistorum. This Mega-NUMT occurs in ~40% of sampled natural populations and across at least 3 semispecies suggesting persistance. doi.org/10.1093/molb...
Phylogenetic tree of mitochondrial genomes and NUMTs found in D. paulistorum.
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Reposted by Molecular Biology and Evolution
Christina Toft @christinatoft.bsky.social · 14/09/2026
Pleased to share a paper I contributed to in Molecular Biology and Evolution. We show that host age structure is a major driver of virulence evolution, shaping specialization, generalism, and adaptation in plant viruses. 🌱🦠 @sfelenalab.bsky.social @i2sysbio.es academic.oup.com/mbe/article/...
academic.oup.com
Evolution of virulence of a plant RNA virus in developmental stage-structured host populations
Abstract. Natural host populations are age-structured, and developmental stages differ in susceptibility and within-host pathogen dynamics, potentially imp
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Molecular Biology and Evolution @molbioevol.bsky.social · 16/09/2026
Authors on Bluesky: @mmontonerin.bsky.social @lisaklas.bsky.social @cecilecourret.bsky.social
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Molecular Biology and Evolution @molbioevol.bsky.social · 16/09/2026
Montoliu-Nerin et al. discover a Mega-NUMT in Drosophila paulistorum genomes and speculate that it is maintained at relatively high prevalence in nature by balancing selection or due to a yet-undetermined function. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
Evolutionary persistence of a highly prevalent multicopy mitochondrial-derived nuclear insertion (Mega-NUMT) in Neotropical Drosophila flies
Abstract. Although strict maternal transmission of mitochondria is a general feature of animals for ensuring homogeneity in mitochondrial DNA (mtDNA) acros
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Molecular Biology and Evolution @molbioevol.bsky.social · 16/09/2026
@haorancai.bsky.social @kgslab.bsky.social & @evodaveo.bsky.social show that genetic correlations are more environmentally stable when driven by polygenic background correlation across many loci, vs. a few large-effect pleiotropic outliers 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio
academic.oup.com
Consistent and idiosyncratic pleiotropy in shaping genetic correlations
Abstract. Pleiotropy, the phenomenon where a single mutation influences multiple phenotypic traits, creates genetic correlations that can constrain evoluti
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Reposted by Molecular Biology and Evolution
Haoran Cai @haorancai.bsky.social · 27/08/2026
Now out @molbioevol.bsky.socialGenetic correlations summarize how traits covary, but they can hide different underlying architectures. Distinguishing those architectures can reveal distinct mechanisms generating—and potentially constraining—trait–trait relationships. academic.oup.com/mbe/advance-...
academic.oup.com
Consistent and idiosyncratic pleiotropy in shaping genetic correlations
Abstract. Pleiotropy, the phenomenon where a single mutation influences multiple phenotypic traits, creates genetic correlations that can constrain evoluti
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Molecular Biology and Evolution @molbioevol.bsky.social · 12/09/2026
Tjeng et al. find that the combination of ancestral variation in flowering and positive selection on new mutations involved in drought responses underlies the evolution of a new trait syndrome and adaptation to climate change in Arabis alpina. 🔗 doi.org/10.1093/molb... #societyjourna #PlantSky
doi.org
Adaptation to seasonal drought in Arabis alpina is linked to the demographic history and climatic changes since the last glacial maximum
Abstract. Understanding how species adapt to new environments is a central goal in evolutionary biology, and a topical question in climate change research.
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Molecular Biology and Evolution @molbioevol.bsky.social · 10/09/2026
Müller et al. show that in hybrid-origin, parthenogenetic whiptail lizards, mutations accumulate in genes involved in core cellular functions, supporting predictions of mutation accumulation in asexual lineages. 🔗 academic.oup.com/mbe/article/... 📷 Paulina and Randy Klabacka #societyjournal
MBE | Mutation accumulation in a hybrid parthenogenetic vertebrate 

Photo: Paulina Klabacka / Randy Klabacka
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Molecular Biology and Evolution @molbioevol.bsky.social · 09/09/2026
Congratulations Benoît, thank you for publishing your research with MBE!
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Reposted by Molecular Biology and Evolution
Benoît Perez-Lamarque @bperezlamarque.bsky.social · 09/09/2026
Check out our new paper in MBE! 🧬🌱🍄 We investigated the evidence for codiversification in mycorrhizal symbioses and found none! In contrast, we found evidence that closely related plants tend to interact with closely related fungi, and vice versa.
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Molecular Biology and Evolution @molbioevol.bsky.social · 09/09/2026
Authors on Bluesky: @zihengyang.bsky.social @phil-donoghue.bsky.social @mariodosreis.bsky.social
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Molecular Biology and Evolution @molbioevol.bsky.social · 09/09/2026
Álvarez-Carretero et al. reexamine claims that molecular clocks are uninformative for dating animal and placental mammal origins, vindicating deep molecular divergence estimates over literalist fossil-based ones. 🔗 hhttps://academic.oup.com/mbe/article/43/9/msag211/8766042 #societyjournal #evobio
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Molecular Biology and Evolution @molbioevol.bsky.social · 08/09/2026
Koch et al. offer insights into the evolution of complex gene repertoires in venoms of predatory cone snails, uncovering how neuropeptide genes were recruited >20 times into the venom and neofunctionalized as doppelgänger toxins. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
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Molecular Biology and Evolution @molbioevol.bsky.social · 08/09/2026
S. Kumar, K. Tamura & S. Sharma present a phylogenomic subsampling-upsampling framework (PSU) that cuts runtime/memory by orders of magnitude while preserving accuracy in bootstrap support, model selection, and divergence time estimates. 🔗 doi.org/10.1093/molb... #societyjournal #compbio
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Molecular Biology and Evolution @molbioevol.bsky.social · 08/09/2026
Bodin, Morlon & @bperezlamarque.bsky.social reevaluated evidence for codiversification in mycorrhizal symbioses, finding that closely related plants often interact with closely related fungi, but their phylogenies do not match. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
Questioning the evidence for host–symbiont codiversification in mycorrhizal symbioses
Abstract. The vast majority of plants form mycorrhizal symbioses. The ecological importance of these mutualistic interactions has sparked interest in their
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/09/2026
@marzena-marszalek.bsky.social et al. integrate WGS and RNAseq from 282 wild yeast strains, finding robust signals of nonsense-mediated mRNA decay but no clear evidence of transcriptional adaptation. 🔗 academic.oup.com/mbe/article/... #societyjournal #evobio #molbio
academic.oup.com
Signatures of nonsense-mediated mRNA decay but no evidence for transcriptional adaptation associated with protein-truncating variants in wild yeast diploids
Abstract. Transcriptional adaptation (TA) is a regulatory process in which loss or disruption of gene function caused by protein-truncating variants (PTVs)
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Molecular Biology and Evolution @molbioevol.bsky.social · 07/09/2026
Yıldırım and James inferred gene-level selective constraints across the genomes of mice, fruit flies, and yeast, finding that gene-level complexity provides a more informative definition of complexity for DFE variation than organism-level labels. 🔗 academic.oup.com/mbe/article/... #societyjournal
academic.oup.com
Gene-level complexity explains genome-wide variation in the distribution of fitness effects
Abstract. The distribution of fitness effects (DFE)—describing how harmful, neutral, or beneficial new mutations are—is central to understanding how popula
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