Sign in

The Kueh lab

@kuehlab.bsky.social
1.4K followers 536 following 60 posts

Associate Professor @ Yale Immunobiology and Center for Systems and Engineering Immunology. Interested in cell fate decisions, circuits and the immune system.

PostsRepliesMedia
Reposted by The Kueh lab
Oded Rechavi @odedrechavi.bsky.social · 15/10/2025
BIG ANNOUNCEMENT📣: I haven’t been this excited to be part of something new in 15 years… Thrilled to reveal the passion project I’ve been working on for the past year and a half!🙀🥳 (thread 👇)
56495185
Reposted by The Kueh lab
Human Immunome Project @immunome.bsky.social · 10/10/2025
"Imagine if we can apply the same approach across the entire world and start to map to capture the true diversity of the human immune system so we can build predictive models and figure out interventions." 🔆 Don't miss David Ewing Duncan's new substack: davideduncan.substack.com/p/welcome-to...
davideduncan.substack.com
Welcome to the Human Immunome—Conversations with Systems Immunologist John Tsang and Human Immunome Project Chair Jane Metcalfe
John and Jane are key subjects in my new investigative article for MIT Tech Review and Aventine. The column offers more details and musings on recent dramatic breakthroughs in immunomics
022
Reposted by The Kueh lab
Nik Joshi @joshilabyale.bsky.social · 02/10/2025
Happy to announce the publication using advanced models to understand how T cells mediate efficient immunoediting in early sarcomas. This was a collaboration between Julie Cheung and Brian Hunt in the lab Thanks to Cancer Cell for publishing our work. www.cell.com/cancer-cell/...
cell.com
Distinct T cell functions enable efficient immunoediting and prevent tumor emergence of developing sarcomas
Cheung et al. describe efficient T cell control of nascent neoantigen+ and nearby neoantigen-negative sarcoma cells, underlying a ∼50% reduction in tumor penetrance. This otherwise imperceptible immun...
22811
Reposted by The Kueh lab
Kilian Schober @kischober.bsky.social · 03/10/2025
If the immune system is an army... ... would you rather rely on one “super warrior” — or on a diverse team of fighters, even if none of them is the single strongest? I’d go with the team. Why? Check out our new study, just published in Science Immunology: www.science.org/doi/10.1126/...
57321
Reposted by The Kueh lab
Waggoner Lab @labwaggoner.bsky.social · 30/09/2025
@biorxivpreprint.bsky.social STAT3 operates as an inflammation-dependent transcriptional switch @josephsunlab.bsky.social @simongrassmann.bsky.social @mskcancercenter.bsky.social www.biorxiv.org/content/10.1...
0161
Reposted by The Kueh lab
Golnaz Vahedi @vahedilab.bsky.social · 23/09/2025
The Vahedi Lab is seeking a highly motivated Research Specialist A/B to join our dynamic research group studying the mechanisms of immune regulation. Apply here: wd1.myworkdaysite.com/recruiting/u...
wd1.myworkdaysite.com
Research Specialist A/B
University Overview The University of Pennsylvania, the largest private employer in Philadelphia, is a world-renowned leader in education, research, and innovation. This historic, Ivy League school co...
066
Reposted by The Kueh lab
Joanna Groom @groomlab.bsky.social · 12/09/2025
Thrilled to have our latest research @wehi-research.bsky.social published in @natimmunol.nature.com www.nature.com/articles/s41... This work was an outstanding partnership between talented PhD student Len Dalit (now postdoc, no 🦋) and bioinformatician @chinweetan.bsky.social Thread below...
nature.com
Divergent cytokine and transcriptional signatures control functional T follicular helper cell heterogeneity - Nature Immunology
Dalit, Tan and colleagues provide a multiomic profile of T follicular helper (TFH) cells responses to diverse pathogens, revealing a blueprint for transcriptional flexibility and new tools to interrog...
33916
The Kueh lab @kuehlab.bsky.social · 20/08/2025
One more thing to mention: we are thrilled to be joining the vibrant and growing Systems Immunology community here, led by @tsanglab.bsky.social. There will be much collaborative work with the vision of understanding and rebuilding the immune system from the ground up, so stay tuned!
090
The Kueh lab @kuehlab.bsky.social · 19/08/2025
We have some news to share: The Kueh lab is moving to ‪Yale this fall!‬ We will be joining the Yale Center for Systems and Engineering Immunology ‪@yalecsei.bsky.social‬ and the Department of Immunobiology. medicine.yale.edu/systems-engi...
medicine.yale.edu
Research
The immune system is a spatially distributed, whole-body sensory-reactive system that monitors, reacts, and adapts to various stress signals (e.g., tissue
2253
Reposted by The Kueh lab
Sarah Ross @sarahhross.bsky.social · 07/08/2025
This week @science.org examines the wonders of the immune system! From molecular defences that co-evolved with pathogens to specialised cells that are intricately linked with physiology, the immune system is attuned to biological sex and different stages of life.
04311
Reposted by The Kueh lab
Jeff Mold @jeffmold.bsky.social · 03/07/2025
Woohoo! From superstars ionut and Marta in the Frisén lab! www.science.org/doi/10.1126/... can’t wait to see what the anti-neurogenesis folks say about it 😃
science.org
Identification of proliferating neural progenitors in the adult human hippocampus
Continuous adult hippocampal neurogenesis is involved in memory formation and mood regulation but is challenging to study in humans. Difficulties finding proliferating progenitor cells called into que...
0195
Reposted by The Kueh lab
EPIGENETIC HULK @epigenetichulk.bsky.social · 13/06/2025
EPIGENETIC HULK READY TO SMASH AGAIN! GET IN LOSERS!
1116750
The Kueh lab @kuehlab.bsky.social · 07/06/2025
Excited to share that our study, on how T cells selectively sense foreign antigens with single-molecule sensitivity, is out! This work was led by the brilliant Will White, and done in collaboration with Jay Groves and David Baker @uwproteindesign.bsky.social www.pnas.org/doi/10.1073/...
pnas.org
PNAS
Proceedings of the National Academy of Sciences (PNAS), a peer reviewed journal of the National Academy of Sciences (NAS) - an authoritative source of high-impact, original research that broadly spans...
2216
Reposted by The Kueh lab
Eric Topol @erictopol.bsky.social · 31/05/2025
First Phase 2 randomized trial of engineered T cells for a solid tumor—GI cancer— with some encouraging results www.thelancet.com/journals/lan... @thelancet.com
521033
Reposted by The Kueh lab
Golnaz Vahedi @vahedilab.bsky.social · 02/06/2025
🚨 New #preprint alert! We're excited to share our latest work: "Single-Allele Chromatin Tracing Reveals Genomic Clustering of Paralogous Transcription Factors as a Mechanism for Developmental Robustness in T Cells"🔗 tinyurl.com/4ve26tbd
23011
Reposted by The Kueh lab
Joseph Sun Lab @josephsunlab.bsky.social · 20/05/2025
Check out this new study and TCR Tg mouse generated by Endi Santosa @endicytosis.bsky.social. If you are interested in studying classic and inflationary CD8+ T cell memory to MCMV infection, we’re happy to share this mouse, and @laboxenius.bsky.social is extremely generous with her Tg lines as well.
rupress.org
Defining molecular circuits of CD8+ T cell responses in tissues during latent viral infection | Journal of Experimental Medicine | Rockefeller University Press
Our findings reveal a divergent transcriptomic and epigenetic landscape between conventional and inflationary memory responses in spleen and liver during l
1135
Reposted by The Kueh lab
Anders Sejr Hansen @andersshansen.bsky.social · 07/05/2025
(1/n) New preprint from @claricehongky.bsky.social Fan Fang Varshini Ramanathan in collab w Jie Liu. Q: How do we get ultra-high-res 3D genome maps? A: New deep learning model, Cleopatra. Cleo trains on Micro-C, fine-tunes on RCMC, and predicts genome-wide 3D maps at ultra-high resolution.
36523
Reposted by The Kueh lab
Anshul Kundaje @anshulkundaje.bsky.social · 04/05/2025
Check out this great resource of single cell multiome data, cell annotations, regulatory DNA models of cell type resolved chromatin accessibility & comprehensive annotation of motifs & sequence syntax for multiple tissues in early human development 1/
37214
Reposted by The Kueh lab
Carl T. Bergstrom @carlbergstrom.com · 19/03/2025
1. For the past thirty years I've had the best job in the world. 
I've had the opportunity to follow my curiosity; explore the workings of nature and society; mentor students and junior colleagues in the same process; and teach generations of students about it all.
382585927
Reposted by The Kueh lab
Vijay G. Sankaran @bloodgenes.bsky.social · 04/04/2025
Delighted to have our Perturb-multiome paper, led by #JorgeMartinRufino and @hemagene.bsky.social from our lab, published today in @science.org. Please check out this powerful approach to decipher gene regulatory networks enriched for genetic variation: www.science.org/doi/10.1126/...
science.org
Transcription factor networks disproportionately enrich for heritability of blood cell phenotypes
Most phenotype-associated genetic variants map to noncoding regulatory regions of the human genome, but their mechanisms remain elusive in most cases. We developed a highly efficient strategy, Perturb...
211929
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 28/03/2025
Powerful new Washington Post story up... wapo.st/426d9fT (Gift link) 1/n
wapo.st
Trump promised scientific breakthroughs. Researchers say he’s breaking science.
NIH funding for biomedical research has abruptly fallen by billions of dollars, with many grant decisions on hold. Trump officials say they’re reviewing the agency.
6340146
Reposted by The Kueh lab
Tcellogic (Sue Kaech) @tcellogic.bsky.social · 13/03/2025
It’s the economy stupid- “There is no better investment than one that saves lives, supports local economies and drives America’s global leadership in biomedical innovation” www.forbes.com/sites/michae...
forbes.com
NIH Grants Fueled $95 Billion In FY 2024 Economic Activity, Finds New Report
National Institutes of Health grants generated almost $95 billion in economic activity nationwide in FY 2024 according to a new report by United for Medical Research.
04213
Reposted by The Kueh lab
Chiraag Kapadia @chiraagkapadia.bsky.social · 06/03/2025
Delighted to share my PhD thesis work is now published in @nature.com! This study tracks the journey of blood stem cells in aging mice, examining how the clonal dynmics of blood production change over time. A short 🧵1/n #aging #stemcells #clonalhematopoiesis www.nature.com/articles/s41...
nature.com
Clonal dynamics and somatic evolution of haematopoiesis in mouse - Nature
Isolating and studying haematopoietic stem cells in young and aged mice demonstrates evolutionary processes related to blood production and provides a framework for interpreting future work using labo...
711425
Reposted by The Kueh lab
Linda Sinclair @lindavsinclair.bsky.social · 01/03/2025
I am overjoyed to present our latest paper on Autophagy in CD8 Tcells! www.nature.com/articles/s41... It was, as all ‘sciencing’ is, a huge team effort. I will try to do it some justice in the following thread 😊 1/n @cantrell-lab.bsky.social @immpres.bsky.social @ajmhowden.bsky.social
nature.com
Autophagy repression by antigen and cytokines shapes mitochondrial, migration and effector machinery in CD8 T cells - Nature Immunology
Sinclair et al. combine quantitative proteomics and an autophagy flux reporter to map autophagy substrates and triggers during CD8 T cell differentiation. Proteins degraded and fueled by autophagy in ...
28528
Reposted by The Kueh lab
Kelly Stevens @kellystevens.bsky.social · 28/02/2025
I'm going to Stand Up for Science 2025 in Seattle. Seattle friends, come join! Fri March 7. Mural Amphitheatre at Seattle Center. 305 Harrison Street, Seattle. 12-3pm PST.
2395
Reposted by The Kueh lab
Atul Gawande @agawande.bsky.social · 27/02/2025
Rubio terminated 5800 USAID contracts – more than 90% of its foreign aid programs – in defiance of the courts. Here’s a list of just some of the lifesaving awards that were terminated. Nearly all were Congressionally mandated. They’ve saved millions of lives. 🧵
420112356200
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 26/02/2025
This is a powerful (and accurate) speech both about curiosity driven research and about which institutions would be most hurt by a 15% cap on indirect cost rates (smaller academic med centers) and who would benefit (China). 1/2
16318
Reposted by The Kueh lab
Eric Topol @erictopol.bsky.social · 24/02/2025
Important editorial: the "existential moment requiring careful and consistent action to preserve the values and ambitions of science." "The weeks ahead may be the greatest test that the US scientific community has ever faced" By @holdenthorp.bsky.social @science.org www.science.org/doi/full/10....
5332114
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 22/02/2025
I have been trying to find the time to move away from the polical hellscape we find ourselves in to finish and share a bluetorial about science. This helps me remember what this is all about. Ironically, it is about the treatment of pain.
media.tenor.com
the word irony is written on a white background
ALT: the word irony is written on a white background
1033289
Reposted by The Kueh lab
Fyodor Urnov @urnov.bsky.social · 10/02/2025
NIH-supported research saves lives: here are two "poster" human beings to prove it. Emily Whitehead: cured of her leukemia by CAR-T developed at Penn. Victoria Gray: major symptoms of her sickle cell disease resolved following CRISPR gene editing - path paved at Boston Childrens, UW, UC Berkeley.
412732
Reposted by The Kueh lab
Science Magazine @science.org · 18/02/2025
More and more scientists are joining the ranks of fired federal workers—and fighting back through protests, appeals, and legal challenges.
scim.ag
Mass firings decimate U.S. science agencies
White House dismissals and rationale challenged by dismissed scientists and lawsuits
7322131
Reposted by The Kueh lab
Caitlin Rivers @cmyeaton.bsky.social · 16/02/2025
I have a NYT essay out this morning. There is very little that Americans can agree on these days. Not religion, not sports, and certainly not politics. But there is one thing nearly everyone agrees on: Vaccines are good. (Gift link) www.nytimes.com/2025/02/16/o...
nytimes.com
Opinion | Kennedy’s Anti-Vaccine Views Don’t Represent America (Gift Article)
Threatening vaccine access is not only bad science, it’s bad politics.
15362121
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 15/02/2025
ATTENTION (PLEASE SHARE) If anyone has or knows of any positions that might be appropriate for the NIH staff members who were terminated, please post the information in this thread. There are lots of talented and accomplished people who may be looking for new opportunities.
media.tenor.com
a poster that says if life gives you lemon make lemonade on it
ALT: a poster that says if life gives you lemon make lemonade on it
92514446
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 15/02/2025
Checking in with sources this morning... The total from NIH was apparently slightly more than 1500 people (out of 5200 HHS Department-wide) 1/n
516384
Reposted by The Kueh lab
Tcellogic (Sue Kaech) @tcellogic.bsky.social · 15/02/2025
Speak up!!! Please email & call you Congress Reps today to oppose these cuts to NIH-especially if you are a scientist living in a red state. Here’s where to find them: www.congress.gov/members/find...
congress.gov
1159
Reposted by The Kueh lab
Alt NIH Bluesky 🧪 @altnih4science.bsky.social · 14/02/2025
It’s been buried in all the news today, but every scientist in the US should pay attention to this: Mike Lauer went out on a limb for us all, sending out a memo saying institutes should start awarding grants. And it looks like Trump/Musk fired him for that. 🧪
201360594
Reposted by The Kueh lab
Senator Patty Murray @murray.senate.gov · 11/02/2025
I've met with many cabinet nominees across many admins, and my meeting with RFK Jr. was by far the most troubling. He rattled off debunked conspiracy theories & lied to my face—denying his own statements he'd made on record. We cannot confirm an anti-vaxxer as Secretary of Health.
1003635899
Reposted by The Kueh lab
Senator Patty Murray @murray.senate.gov · 12/02/2025
There will be devastating consequences if RFK Jr. is confirmed. Senate Republicans need to show some courage, show some conscience, and say NO to a vaccine denier becoming our highest-ranking health official.
32604109
Reposted by The Kueh lab
Eric Topol @erictopol.bsky.social · 11/02/2025
A Direct Hit, by @holdenthorp.bsky.social @science.org www.science.org/doi/full/10.... "This is a moment to unite."
24899375
Reposted by The Kueh lab
Katie Phang @katiephang.bsky.social · 11/02/2025
JUST IN: Federal judges orders HHS, CDC, and FDA to restore “by no later than 11:59 pm” today their websites and datasets to pre-January 30th status. storage.courtlistener.com/recap/gov.us...
storage.courtlistener.com
14745193713639
Reposted by The Kueh lab
Eli Perencevich @eliowa.bsky.social · 10/02/2025
Just got the dreaded email. University of Iowa is halting all NIH grant submissions. Losing a generation of scientists here will send the state backwards. What a travesty.
6175302106
Reposted by The Kueh lab
P. Andrew Torrez @andrewtorrez.bsky.social · 10/02/2025
The American Bar Association has just called upon every attorney, regardless of their political views, to join them & stand up for the rule of law & at minimum insist that our government "follow the law." Every lawyer has an ethical responsibility to do so. www.americanbar.org/news/abanews...
We call upon our elected representatives to stand with us and to insist upon adherence to the rule of law and the legal processes and procedures that ensure orderly change. The administration cannot choose which law it will follow or ignore. These are not partisan or political issues. These are rule of law and process issues. We cannot afford to remain silent. We must stand up for the values we hold dear. The ABA will do its part and act to protect the rule of law.

We urge every attorney to join us and insist that our government, a government of the people, follow the law. It is part of the oath we took when we became lawyers. Whatever your political party or your views, change must be made in the right way. Americans expect no less.
19593783202
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 10/02/2025
NIH Updates Good news: It appears that at least of the submitted F31 diversity supplements for which the study section had disappeared from eRA commons are reappearing with the original study section. Still uncertain future, but it's a step. 1/2
media.tenor.com
three minions are standing in front of a sign that says " theres an update "
ALT: three minions are standing in front of a sign that says " theres an update "
523341
Reposted by The Kueh lab
Kyle Cheney @kyledcheney.bsky.social · 10/02/2025
JUST IN: A federal judge in Massachusetts has blocked the Trump administration's rate change to NIH grants. storage.courtlistener.com/recap/gov.us...
6954641290
Reposted by The Kueh lab
Ardem Patapoutian @ardemp.bskyverified.social · 10/02/2025
Petition to Reverse the NIH Indirect Cost Cap initiated by Tom Maniatis. Please amplify Sign the Petition: chng.it/kK2HMP5pGk "Share with Leadership & Faculty. Reach out to professional societies, biotech and pharma leaders, and philanthropic organizations to raise awareness and mobilize support."
chng.it
Sign the Petition
Petition to Reverse the NIH Indirect Cost Cap (NOT-OD-25-068)
9157139
Reposted by The Kueh lab
Alex Merz 🇺🇸🇨🇦🇺🇦 @merz.bsky.social · 10/02/2025
Hero lawyers in state AG offices busted their asses over the weekend to get this done. Now do your part: call your Representative and Senators TODAY. Call your AG AND governor and voice your support for these lawsuits.
435099
Reposted by The Kueh lab
Josh Gerstein @joshgerstein.bsky.social · 10/02/2025
BREAKING: 22 states sue NIH over Trump administration's new 15% cap on overhead for federal research grants. Suit filed federal court in Boston contends lifesaving research 'will grind to a halt' under the policy. Doc: storage.courtlistener.com/recap/gov.us...
storage.courtlistener.com
6133391140
Reposted by The Kueh lab
Laura White @laurakwhite.bsky.social · 10/02/2025
Made some slides for scientists to talk about what's been happening & what we should do next. There are probably many people better qualified than me to talk about these issues. If that's you, please, please, please consider holding some virtual advocacy training sessions for researchers this week.
docs.google.com
The War on Science (Feb 2025 teach-in draft)
The War on Science What’s happening? What can we do about it? An interactive teach-in for biomedical researchers Please share, modify, and repurpose this template presentation (with credit). Good luck...
17237135
Reposted by The Kueh lab
Miguel Reina-Campos @reinacampos.bsky.social · 10/02/2025
Press release by the appropriations subcommittee on NIH budget slashing by @delauro.house.gov 🙏
democrats-appropriations.house.gov
Trump Team Dismantles Efforts to Find a Cure for Cancer and Other Deadly Disorders and Diseases
President Trump’s Administration is imposing a new policy to cap indirect costs for National Institutes of Health (NIH) research grants at 15 percent, which would cut billions of dollars in funding fo...
02826
Reposted by The Kueh lab
Jeremy Berg @jeremymberg.bsky.social · 10/02/2025
A useful tool and a great thing to do... 5calls.org/issue/nih-ns...
5calls.org
Save NIH and NSF Research Funding ⭑ 5 Calls
On February 7, the Trump administration moved to cut billions of dollars in funding from the National Institutes of Health (NIH) and National Science …
0177139