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Gerben Vader

@vaderlab.bsky.social
462 followers 230 following 8 posts

Cell biologist/Geneticist. Princess Maxima Center for Pediatric Oncology - Utrecht, the Netherlands Investigating the molecular adaptations that drive meiosis, and how meiotic factors are hijacked by cancer cells.

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Reposted by Gerben Vader
Alan Gerber @alangerber.bsky.social · 28/09/2026
Preprint alert 🚨: We built a CRISPRi screen for a part of the genome that is unusually awkward to perturb: the RNA Pol III transcriptome. Hundreds of tRNA genes, lots of sequence similarity, plenty of redundancy... Turns out the biology had a few surprises for us 👇 www.biorxiv.org/content/10.6...
biorxiv.org
Targeted CRISPRi screening reveals unexpected resilience across the RNA polymerase III transcriptome
Increased RNA polymerase III (Pol III) activity and tRNA abundance are widely linked to cancer cell growth, yet the functional requirement for individual Pol III genes and core components remains uncl...
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Reposted by Gerben Vader
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 25/09/2026
Spatial separation provides the force-coupling mechanism for the spindle assembly checkpoint www.biorxiv.org/content/10.64898/20…
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Reposted by Gerben Vader
Aurele Piazza @aurelepiazza.bsky.social · 18/09/2026
What molecular mechanisms underlie the needle-in-a-haystack search for homology required to fix a DNA break? In this preprint, we reveal multiple controls of homology search in cells: onset, coordination, reach and inactivation. www.biorxiv.org/content/10.6...
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Christian Zierhut @zierlab.bsky.social · 21/08/2026
Supremely excited to share our new paper in @natcellbio.nature.com With an updated genetic cGAMP reporter, we reveal that cGAS activation by DNA damage is a rare event, and that cGAS enrichment on intracellular structures cannot be taken as evidence of activation. www.nature.com/articles/s41...
nature.com
A versatile cGAMP reporter reveals principles of cGAS activation by DNA damage and chromosome instability - Nature Cell Biology
Lebrec et al. present a FRET-based cGAS reporter and show that cGAS activation by genotoxic stress is rare and uncoupled from micronuclei. The study implicates R-loop structures and subtypes of chroma...
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marcelvanvugt.bsky.social @marcelvanvugt.bsky.social · 24/08/2026
Very pleased to share this new study: In a truly collaborative effort with the lab of Pim Huis in 't Veld @huis.bsky.social, we combined biochemistry with cell biological and genomic approaches to uncover how CIP2A works in mitotic DNA repair. www.biorxiv.org/content/10.6...
biorxiv.org
CIP2A tetramerization is required for mitotic DNA repair
DNA lesions that persist in mitosis threaten genome stability. These lesions recruit TOPBP1-CIP2A, a complex crucial to tether and process damaged DNA on mitotic chromosomes. Importantly, CIP2A is syn...
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Reposted by Gerben Vader
Iva Tolić @ivatolic.bsky.social · 10/04/2026
Only two days to go until the “Mitotic Spindle: From Living and Synthetic Systems to Theory” meeting in Dubrovnik! This is the 4th time Nenad Pavin and I are organizing it, and it keeps growing with each edition. Can’t wait to see everyone in Dubrovnik! shorturl.at/35Vff
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Hironori Funabiki @hirofunabiki.bsky.social · 09/04/2026
Excited to share our structural insights into how microtubules differentially guide phosphorylation of kinetochore-microtubule regulators, Ndc80 and MCAK, for chromosome segregation. Heroic efforts by Yiming Niu with a fun collaboration with Jennifer DeLuca lab! www.science.org/doi/10.1126/...
science.org
Microtubules guide Aurora B substrate geometries for accurate chromosome segregation
Cryo-EM reveals how kinetochore-microtubule attachment is regulated by Aurora B substrate accessibility on microtubules.
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Reposted by Gerben Vader
Iva Tolić @ivatolic.bsky.social · 28/03/2026
Chromosomes stuck behind the spindle are ticking time bombs for aneuploidy. We uncovered a mechanical rescue mechanism where microtubule pivoting repositions these high-risk chromosomes! Out last week in @natcomms.nature.com, here's a thread 🧵 shorturl.at/OD89x
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Daniel Hurdiss @danielhurdiss.bsky.social · 27/03/2026
The newly established NeCEN Utrecht is looking for a #cryoEM scientist! www.uu.nl/en/organisat... Work with a new Krios 5 + pFIB and support cutting-edge life science research. 📍 Utrecht | 🗓 Apply by 30 April Please share with your network!
uu.nl
Cryo-electron microscopy scientist
Join our team to contribute to the operation and innovation of state-of-the-art cryo-electron microscopes and empower groundbreaking research.
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Gerben Vader @vaderlab.bsky.social · 04/03/2026
Join us at the @themaximacenter.bsky.social! werkenbijprinsesmaximacentrum.nl/en/vacancy/j...
werkenbijprinsesmaximacentrum.nl
Junior Group Leader (Tenure Track) - Werken bij Prinses Maxima Centrum
The position You will be responsible for establishing and leading your own research group. As a junior group leader you are expected to establish a unique and impactful line of research funded through...
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Reposted by Gerben Vader
Iva Tolić @ivatolic.bsky.social · 02/02/2026
Mitosis lovers, get ready for Dubrovnik! 🔬🎉 I’m super excited to be organizing the 4th Mitotic Spindle Conference with Nenad Pavin, and we can’t wait to see you there! Want your abstract to be selected for a talk? Submit by Feb 8! www.phy.pmf.unizg.hr/~mitosis/ #SpindleCroatia2026
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Maiato Lab @mitosisrocks.bsky.social · 29/01/2026
Mitosis has a timing system. If chromosomes attach properly, cells divide on schedule and keep proliferating. If attachment is slow or incomplete, the delay is recorded — and daughter cells stop dividing. We explore this link in our new preprint. 🔗 www.biorxiv.org/content/10.6...
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The EMBO Journal @embojournal.org · 28/01/2026
Arianna Esposito Verza, @andrea-musacchio.bsky.social et al describe the long-sought-after mechanism of Bora dependency of PLK1 activation by Aurora A kinase during mitotic entry Another #RefereedPreprint ℅ @reviewcommons.org link.springer.com/article/10.1...
link.springer.com
Molecular requirements for PLK1 activation by T-loop phosphorylation - The EMBO Journal
Activation of PLK1, a master mitotic kinase, requires phosphorylation of its activation segment on Thr210, within a basic consensus sequence for Aurora kinases. Aurora B-dependent phosphorylation of T...
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Gerben Vader @vaderlab.bsky.social · 22/01/2026
Registration is still open for this great meeting! Sign up for the 32nd ‘Dutch Cancer Biology Meeting’, focussed on the biology of cancer, which will be organized on March 5-6, 2026 in Lunteren, NL Registration: lnkd.in/ehKXDtpP More info: www.dutchcancerbiology.nl @marcelvanvugt.bsky.social
dutchcancerbiology.nl
Dutch Cancer Biology Meeting | Cancer
Dutch Cancer Biology Meeting: a yearly two-day conference on the biology and genetics of cancer at Hotel de Werelt in Lunteren
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Reposted by Gerben Vader
Nature @nature.com · 16/12/2025
All living organisms face the problem of parasites - but what happens when DNA has invaded the genome? go.nature.com/3MDiJCq
go.nature.com
SOS: RNA-processing mechanism rescues genes from invasive DNA
Transposable elements can insert into genes, disrupting protein-coding potential. Researchers discover a mode of RNA processing, ‘SOS splicing’, that provides a quick fix.
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Adrian Saurin @adesaurin.bsky.social · 08/12/2025
2 recent preprints show the mitotic stopwatch monitors more than just mitotic delays - it protects against WGD, cell enlargement and other stresses that mildly activate p53. It may act to amplify p53 signals to suppress tumourigenesis www.biorxiv.org/content/10.1... www.biorxiv.org/content/10.6...
biorxiv.org
The mitotic stopwatch limits the proliferation of whole genome doubled cells
Whole genome doubling (WGD) is a frequent event in tumourigenesis that promotes chromosomal instability and tumour evolution. WGD is sensed indirectly due to the presence of extra centrosomes, which a...
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Reposted by Gerben Vader
Gautam Dey @gautamdey.bsky.social · 27/11/2025
So proud to watch Jana turn a side quest into an entire research programme. Couldn’t imagine a more well-deserved outcome. 😍 The mighty yeast reveals what we believe are general principles of centromere evolution! Behind the curtain: communities.springernature.com/posts/counti... #MEvoSky 🧪🌎
communities.springernature.com
Counting Chromosomes: The Simple Idea That Unlocked the Rules Behind Centromere Evolution
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Andrea Musacchio @andrea-musacchio.bsky.social · 20/11/2025
Why IDPs Are Poor Candidates for Homotypic LLPS 🧵👇A thread
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Luijsterburglab @luijsterburglab.bsky.social · 12/11/2025
Registration is open!🧬 Join us at Egmond aan Zee (April 19–24, 2026) for the next DNA Repair Meeting. We have an amazing line-up of speakers. 📅 Deadline for early registration: Jan 10, 2026 🔗 dnarepairmeeting-egmond2026.com
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Graham Dellaire @docdellaire.bsky.social · 23/11/2025
They did a great job of validating endogenous repair was not affected. The FRAP data indicates a high on/off rate at damage sites, which is what you probably need to prevent blocking other chromatin readers and repair proteins from accessing the damaged DNA.
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Gerben Vader @vaderlab.bsky.social · 22/11/2025
Check out this beautiful paper by @richardcsilva.bsky.social et al., out now in @natcomms.nature.com. Great new DSB sensors to track DNA break formation and repair in real-time www.nature.com/articles/s41...
nature.com
Engineered chromatin readers track damaged chromatin dynamics in live cells and animals - Nature Communications
DNA damage threatens genome stability, but its dynamics in living systems remain difficult to track. Here, the authors engineer MCPH1-based protein probes that specifically recognize γH2AX, enabling r...
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Gerben Vader @vaderlab.bsky.social · 22/11/2025
Join us in Lunteren, the Netherlands on March 5 & 6, 2026 for the 32nd Dutch Cancer Biology meeting. We have two fantastic keynote speakers: @andrea-musacchio.bsky.social and @colindascheele.bsky.social and the rest of the program will be by early-career scientists. Info: www.dutchcancerbiology.nl
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Gerben Vader @vaderlab.bsky.social · 01/08/2025
Revised version of our original Red1-Hop1-Mek1 story, together with @jweir.bsky.social lab now online @biorxivpreprint.bsky.social Check it out: www.biorxiv.org/content/10.1...
biorxiv.org
Organizational principles governing assembly and activation of the meiosis-specific Red1-Hop1-Mek1 complex
In mitosis, sister chromatids are preferred repair templates for homologous recombination, whereas in meiosis interhomolog-based repair is promoted. How this switch, which is a defining event in sexua...
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Reposted by Gerben Vader
Science Magazine @science.org · 26/05/2025
Pancreatic cancer cells express cryptic peptides shared across patients that may be therapeutic targets, according to new research in Science.
scim.ag
The hunt for common tumor antigens
Pancreatic cancer cells express cryptic peptides shared across patients that may be therapeutic targets
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Reposted by Gerben Vader
bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 24/05/2025
Single kinetochores execute an ordered series of molecular events as the Spindle Assembly Checkpoint is silenced www.biorxiv.org/content/10.1101/202…
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bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 16/05/2025
A Conserved Disruption of the Nuclear Permeability Barrier in Meiosis is Controlled by a Kinase-Phosphatase Pair in Saccharomyces cerevisiae www.biorxiv.org/content/10.1101/202…
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Prasad Jallepalli, MD, PhD @prasad.bsky.social · 16/05/2025
astounding yet also a reminder of how diverse life is -- often there are many different solutions to the same problem, but we're only aware of the ones on-hand (usually our own)
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Alessandra Brambati @alebrambati.bsky.social · 12/05/2025
Excited to share our latest from my postdoc at @mskcancercenter.bsky.social in the Sfeir Lab, in collaboration with the Simon Powell Lab! We uncovered a novel genome repair mechanism in human cells: RNA-templated DNA double-strand break repair (RT-DSBR). (1/5)
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Valentina Piano @valentinapiano.bsky.social · 05/05/2025
Super excited to share my latest review! In this piece, I dive into how cells cleverly reuse proteins for mitosis-specific tasks — a fascinating and still underexplored area. There’s so much more to uncover, and I hope this review sparks new ideas and discussions! pubs.acs.org/doi/10.1021/...
pubs.acs.org
Multitasking Proteins: Exploring Noncanonical Functions of Proteins during Mitosis
This review provides a comprehensive overview of how mitotic cells drive the repurposing of proteins to fulfill mitosis-specific functions. To ensure the successful completion of cell division, the cell strategically reallocates its “workforce” by assigning additional functions to available proteins. Protein repurposing occurs at multiple levels of cellular organization and involves diverse mechanisms. At the protein level, proteins may gain mitosis-specific functions through post-translational modifications. At the structural level, proteins that typically maintain cellular architecture in interphase are co-opted to participate in mitotic spindle formation, chromosome condensation, and kinetochore assembly. Furthermore, the dynamic reorganization of the nuclear envelope and other organelles relies on the temporary reassignment of enzymes, structural proteins, and motor proteins to facilitate these changes. These adaptive mechanisms underscore the remarkable versatility of the cellular proteome in responding to the stringent requirements of mitosis. By leveraging the existing proteome for dual or multiple specialized roles, cells optimize resource usage while maintaining the precision needed to preserve genomic integrity and ensure the survival of the next generation of cells.
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Max Haase @maxhaase.bsky.social · 25/04/2025
It’s out! The evolutionary origins of yeast point centromeres uncovered! “Ancient co-option of LTR retrotransposons as yeast centromeres” www.biorxiv.org/content/10.1...
biorxiv.org
Ancient co-option of LTR retrotransposons as yeast centromeres
The evolutionary origins of the genetic point centromere in the brewer's yeast Saccharomyces cerevisiae, a member of the order Saccharomycetales, are still unknown. Competing hypotheses suggest that t...
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Martin Loose @nartimsoole.bsky.social · 10/04/2025
Looking for a student or postdoc! Want to combine evolutionary analysis + structural modeling with in vitro biochemistry & fluorescence microscopy? Help us uncover new protein-protein interactions — from in silico to in vitro. Join us at @istaresearch.bsky.social 👉 looselab.org 🧬💡🔬🎡
looselab.org
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Luijsterburglab @luijsterburglab.bsky.social · 09/04/2025
A must for all DNA repair aficionados! Egmond DNA Repair Meeting → April 19–24, 2026 🇳🇱 ✔️ Confirmed top speakers ✔️ Ample opportunities for talks & posters Don’t miss it: dnarepairmeeting-egmond2026.com
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The EMBO Journal @embojournal.org · 01/04/2025
In vitro reconstitution by Peter Bieling, William Bement and collaborators reveals mechanistic principles of Rho GTPase activity patterning at cellular membranes, and stage-specific roles of regulators www.embopress.org/doi/full/10....
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Iain Cheeseman @iaincheeseman.bsky.social · 28/03/2025
New preprint drop! Check out work from @jimmy-ly.bsky.social et al for how protein isoforms generated by alternate translation initiation create dual localization, contribute to mitochondrial function, and are mutated in disease. "Blue-tutorial" thread below. www.biorxiv.org/content/10.1...
biorxiv.org
Alternative start codon selection shapes mitochondrial function during evolution, homeostasis, and disease
Mitochondrial endosymbiosis was a pivotal event in eukaryotic evolution, requiring core proteins to adapt to function both within the mitochondria and in the host cell. Here, we systematically profile...
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Fena Ochs @fenaochs.bsky.social · 25/03/2025
Wonderful, thought-provoking review by Sir Adrian Bird on cohesin loop extrusion as disrupter of chromatin organisation rather than generator. Great read! www.sciencedirect.com/science/arti...
sciencedirect.com
Cohesin as an essential disruptor of chromosome organization
Cohesin is a multi-subunit molecular machine that is able to create lateral chromatin loops within a linear chromosome fiber. Despite intense study, a…
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bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 04/03/2025
Visualizing homology search in living cells www.biorxiv.org/content/10.1101/202…
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John Prensner @johnprensner.bsky.social · 29/01/2025
Alert to the #darkproteome community 👇 Here's a great article to get you fast-tracked into the world of #microproteins. Such a pleasure to work on this piece with @nature.com, @sebastiaanvheesch.bsky.social, Marie Brunet, Jonathan Weissman and Jon Mudge. #genomics #bioinformatics 🧬 💻 #proteomics
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Gerben Vader @vaderlab.bsky.social · 20/01/2025
The Dutch Cancer Biology Meeting will be held on March 13th-14th 2025, at Hotel De Werelt in Lunteren. The meeting will feature two keynote speakers: Christian Reinhardt, and @fmattiroli.bsky.social. Other talks by early-career researchers. Register here: oncodeinstitute.nl/form/2025-du...
oncodeinstitute.nl
Oncode Institute
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John Weir @jweir.bsky.social · 22/12/2024
New preprint! How does meiosis work in non-model organisms? Together with Susana Coelho at the MPI for Biology Tübingen @mpi-bio-fml.bsky.social , we took a look at the proteins of the meiotic axis in the brown alga Ectocarpus www.biorxiv.org/content/10.1...
biorxiv.org
Exploring Meiosis in Brown Algae: Meiotic Axis Proteins in the model brown alga Ectocarpus
Most extant eukaryotic systems share core meiosis-specific genes, suggesting meiosis evolved only once in the last eukaryotic common ancestor (LECA). These genes have been characterized as master regu...
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Adele Marston @marstonlab.bsky.social · 18/12/2024
Happy to see this out before the end of the year. Fantastic work by Lily Wang with help from our wonderful technologists in the Discovery Platform Proteomics Core managed by Christos Spanos. Great publishing experience @embojournal.bsky.social www.embopress.org/doi/full/10....
embopress.org
Molecular mechanism targeting condensin for chromosome condensation | The EMBO Journal
imageimageHow the condensin complex is recruited to genomic domains to promote their condensation is incompletely understood. This study identifies a generalised molecular mechanism by which condensin...
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John Prensner @johnprensner.bsky.social · 26/11/2024
Do you want to go further with your proteomics? Looking for something new in cancer? Check out microproteins! Thanks to @science.org for featuring this work, in collaboration with @sebastiaanvheesch.bsky.social, #HUPO, @gencodegenes.bsky.social www.science.org/content/arti... 🔎 microprotein 🧬 💻
science.org
‘Dark proteome’ survey reveals thousands of new human genes
Database confirms that overlooked segments of the genome code for a multitude of tiny proteins
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raphmercier.bsky.social @raphmercier.bsky.social · 18/11/2024
Reposting an old meme. My greatest contribution to the field #meiosis4ever #meiosis4eva
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Adele Marston @marstonlab.bsky.social · 17/11/2024
Great line up for EMBO meiosis 2025!
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Andrea Musacchio @andrea-musacchio.bsky.social · 17/11/2024
I gladly bring this meeting to your attention so that you can mark dates in your calendar in case your are interest. Additional information will follow. Please circulate if possible.
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Mcclelland lab @mcclellandlab.bsky.social · 14/11/2024
Announcing the next EMBO Chromosome Segregation and Aneuploidy Meeting! Italy 2025. Please register and join us for another exciting and friendly meeting in a beautiful location meetings.embo.org/event/25-ane...
meetings.embo.org
Chromosome Segregation and Aneuploidy
Aneuploidy is a hallmark of cancer and developmental disorders such as Down syndrome. Understanding how cells accomplish faithful chromosome segregation and how chromosomal instability (CIN) impacts …
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Takashi Akera Lab @takashiakeralab.bsky.social · 14/11/2024
Official website for EMBO meiosis 2025 is live now! Looking forward to seeing you in Switzerland next June! #meiosis4eva meetings.embo.org/event/25-mei...
meetings.embo.org
Meiosis: Exploring diversity to discover the fundamentals
Meiosis is an essential cell division for sexual reproduction and fertility across eukaryotes. It involves a series of tightly regulated processes, including entry into meiosis, pairing of homologs, …
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Francesca Mattiroli @fmattiroli.bsky.social · 12/11/2024
The peer-reviewed version of our paper is out! Thanks to all co-authors, editor and reviewers for the smooth process 🤓🎉 And don’t miss the chromatin haiku! www.cell.com/molecular-ce...
cell.com
Acute multi-level response to defective de novo chromatin assembly in S-phase
Dreyer et al. show the broad and rapid impact that acute inhibition of chromatin formation in S-phase has on DNA replication, chromatin stability, and cell-cycle progression. This study sheds light on...
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André Marques @amarques.bsky.social · 06/11/2024
I am very happy to share our recent publication 𝑹𝒆𝒑𝒆𝒂𝒕-𝒃𝒂𝒔𝒆𝒅 𝒉𝒐𝒍𝒐𝒄𝒆𝒏𝒕𝒓𝒐𝒎𝒆𝒓𝒆𝒔 𝒐𝒇 𝒕𝒉𝒆 𝒘𝒐𝒐𝒅𝒓𝒖𝒔𝒉 𝑳𝒖𝒛𝒖𝒍𝒂 𝒔𝒚𝒍𝒗𝒂𝒕𝒊𝒄𝒂 𝒓𝒆𝒗𝒆𝒂𝒍 𝒊𝒏𝒔𝒊𝒈𝒉𝒕𝒔 𝒊𝒏𝒕𝒐 𝒕𝒉𝒆 𝒆𝒗𝒐𝒍𝒖𝒕𝒊𝒐𝒏𝒂𝒓𝒚 𝒕𝒓𝒂𝒏𝒔𝒊𝒕𝒊𝒐𝒏 𝒕𝒐 𝒉𝒐𝒍𝒐𝒄𝒆𝒏𝒕𝒓𝒊𝒄𝒊𝒕𝒚 in Nature Communications @natureportfolio.bsky.social rdcu.be/dZk7W
rdcu.be
Repeat-based holocentromeres of the woodrush Luzula sylvatica reveal insights into the evolutionary transition to holocentricity
Nature Communications - Unlike most eukaryotes, Luzula sylvatica assembles holocentromeres along the entire chromosome length. Here, the authors combine genome assembly, epigenetic and cytogenetic...
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bioRxiv Molecular Biology @biorxiv-molbio.bsky.social · 07/04/2024
Nuclear release of eIF1 globally increases stringency of start-codon selection to preserve mitotic arrest physiology www.biorxiv.org/content/10.1101/202…
biorxiv.org
Nuclear release of eIF1 globally increases stringency of start-codon selection to preserve mitotic arrest physiology https://www.biorxiv.org/content/10.1101/2024.04.06.588385v1
Regulated start-codon selection has the potential to reshape the proteome through the differential p
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Iain Cheeseman @iaincheeseman.bsky.social · 03/04/2024
Join me for a countdown to a cool new preprint exploring alternative translational control during the cell cycle. Interphase cells can survive translation inhibition for days (see below). Translation levels decrease in mitosis, but did you know that mitotic cells strongly require new translation?
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