Sign in

Cenk Gurdap

@cenkgurdap.bsky.social
761 followers 2.2K following 12 posts

PhD student at Karolinska Institutet and Scilifelab | Cell physics www.csi-nano.org

PostsRepliesMedia
Reposted by Cenk Gurdap
Giovanni D’Angelo @giodang.bsky.social · 23/09/2026
#lipidtime: It's a lipid universe. Today in Nature we publish the Lipid Brain Atlas, the first map of membrane lipid composition across the entire mouse brain, a layer of organisation that cell-type and transcript maps had left out. #lipidomics #neuroscience #BrainAtlas
1011852
Reposted by Cenk Gurdap
Andrey Klymchenko @aklymchenko.bsky.social · 23/09/2026
Pre-print alert: we are thrilled to report on rhodamine-derived ratiometric molecular rotor for ratiometric sensing of viscosity in mitochondria. Thanks to co-authors O. Kharchenko and P. Didier! @cnrs.fr, @unistra.fr and @agencerecherche.bsky.social. BioRxiv link: www.biorxiv.org/content/10.6...
0163
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 17/09/2026
New paper out: Plasma membrane order maps functional diversity in immune cells We showed how biophysical state of the membranes correlates with the activity of immune cells such as migration and killing. www.nature.com/articles/s41...
nature.com
Plasma membrane order maps functional diversity in immune cells - Nature Chemical Biology
Cells undergo membrane remodeling in response to the environment to perform specific functions. Now, a cytometry-based method with immune cell biomarker analysis captures variations in plasma membrane...
04215
Reposted by Cenk Gurdap
SciLifeLab @scilifelab.se · 09/09/2026
A new study led by Erdinc Sezgin (@sciezgin.bsky.social) has developed a method for measuring the physical properties of cell membranes in thousands of individual immune cells simultaneously! 🧪 Read more in the article below ↓ www.scilifelab.se/news/a-new-w...
scilifelab.se
A new way to read immune cells through their membranes
A new study published in Nature Chemical Biology by researchers from SciLifeLab and Karolinska Institutet has developed a method for measuring the physical properties of cell membranes in thousands of...
0102
Reposted by Cenk Gurdap
Dimova Lab @dimovalab.bsky.social · 03/09/2026
This review with Agu @mangiarotti.bsky.social 🙏on a topic close to my heart -membranes&condensates- came out some time ago.Only after receiving the printed issue,I realized it's on the journal cover. It does not have much to do with plants, but droplets on thin surfaces is kind of what it is about.
162
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 28/08/2026
Open postdoctoral fellow position in our lab on "𝐌𝐨𝐥𝐞𝐜𝐮𝐥𝐚𝐫 𝐇𝐨𝐬𝐭-𝐏𝐚𝐭𝐡𝐨𝐠𝐞𝐧 𝐈𝐧𝐭𝐞𝐫𝐚𝐜𝐭𝐢𝐨𝐧𝐬". Are you interested in macromolecular interactions during host-pathogen interactions both 𝐞𝐱𝐩𝐞𝐫𝐢𝐦𝐞𝐧𝐭𝐚𝐥𝐥𝐲 𝐚𝐧𝐝 𝐜𝐨𝐦𝐩𝐮𝐭𝐚𝐭𝐢𝐨𝐧𝐚𝐥𝐥𝐲? Want to join our team? apply here 👇 ki.varbi.com/what:job/job...
ki.varbi.com
Postdoktor i molekylära värd-patogeninteraktioner
Vill du bidra till medicinsk forskning av toppkvalitet? Vi söker en postdoktoral forskare som kommer att studera makromolekylära interaktioner vid värd-patogeninteraktioner med hjälp av avancerade
01414
Reposted by Cenk Gurdap
Bruno Stojcic @brunostojcic.bsky.social · 27/08/2026
The first paper of my PhD is now out in The Journal of Membrane Biology! 🎉 We used DNA-PAINT SMLM to investigate the role of glycosylation in membrane protein clustering. Thanks to all co-authors and my supervisor Hjalmar Brismar for making it possible! Check out the paper: shorturl.at/Wb8Y9
071
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 22/08/2026
New paper alert 🎇 in @biologists.bsky.social Journal of Cell Science.. Cell surface remodeling caused by the loss of the flippase subunit TMEM30A in immune cells: journals.biologists.com/jcs/article/...
journals.biologists.com
Cell surface remodeling caused by the loss of the flippase subunit TMEM30A in immune cells
Summary: TMEM30A loss disrupts membrane lipid asymmetry, increasing phosphatidylserine exposure, membrane dynamics and surface remodeling, linking flippase dysfunction to immune cell interactions.
1318
Reposted by Cenk Gurdap
Nature Nanotechnology @natnano.nature.com · 06/08/2026
dlvr.it
Spectral biophysical cytometry with nanosensors reveals remodelling of immune cells in atherosclerosis
Nature Nanotechnology, Published online: 06 August 2026; doi:10.1038/s41565-026-02236-8Membrane-permeant, environment-sensitive nanosensors enable high-throughput, multiparametric quantification of membrane order and mitochondrial potential, revealing immune-cell-specific remodelling and lipid-metabolic dysfunction in atherosclerosis.
041
Reposted by Cenk Gurdap
Karolinska Institutet @ki.se · 06/08/2026
Researchers have developed a new method to analyse the condition of immune cells in the blood. The method has been tested on patients with #atherosclerosis and can distinguish their immune cells from those of healthy individuals. Published in @natnano.nature.com 🧪 news.ki.se/new-method-d...
173
Cenk Gurdap @cenkgurdap.bsky.social · 07/08/2026
Physical state of a cell, how tightly packed plasma membrane is or how polarised its mitochondria are, shapes what the cell does. Measuring this across many cells at once has been hard. Spectral biophysical cytometry is now out in @natnano.nature.com: www.nature.com/articles/s41... #lipidtime
nature.com
Spectral biophysical cytometry with nanosensors reveals remodelling of immune cells in atherosclerosis - Nature Nanotechnology
Membrane-permeant, environment-sensitive nanosensors enable high-throughput, multiparametric quantification of membrane order and mitochondrial potential, revealing immune-cell-specific remodelling an...
1113
Reposted by Cenk Gurdap
André Nadler @nadlerlab.bsky.social · 29/07/2026
Lipids build the membranes of all cells, but identifying their precise functions is extremely challenging. Here’s our attempt to change that: How to find and understand lipid-protein interactions, by Katelyn Cook & company. www.biorxiv.org/content/10.6...
716170
Reposted by Cenk Gurdap
Adrien Schahl @aschahl.bsky.social · 26/06/2026
How do you choose a CV for MD enhenced sampling methods ? Well, this question is not easy to answer. We tried to help the MD community by giving some clues about it in the following review : www.sciencedirect.com/science/arti... Feedbacks appreciated :)
sciencedirect.com
Collective variable design for biomolecular conformational dynamics
Describing conformational changes in biomolecules using molecular dynamics simulations requires defining an appropriate low-dimensional mathematical d…
1114
Reposted by Cenk Gurdap
Jörg Enderlein @joergenderlein.bsky.social · 14/05/2026
Excited to share our latest work in @ScienceAdvances! 🔬 We’ve developed "dynaMIET"—a new spectroscopy technique that finally allows us to simultaneously measure 3D membrane dynamics in live cells with nanometer precision. www.science.org/doi/10.1126/...
science.org
Quantifying 3D live-cell membrane dynamics using dynamic metal-induced energy transfer spectroscopy (dynaMIET)
dynaMIET enables simultaneous measurement of lateral diffusion and vertical membrane fluctuations in live cells.
26318
Reposted by Cenk Gurdap
Melike Dönertaş @mdonertas.bsky.social · 11/05/2026
Check out our new review on evolutionary genetics of ageing 🔥 rdcu.be/fh3VU @natrevgenet.nature.com @leibnizfli.bsky.social @ihaucl.bsky.social
0317
Reposted by Cenk Gurdap
Giovanni D’Angelo @giodang.bsky.social · 07/05/2026
This is our new story on ether lipids and ferroptosis in neurons. A collaboration started by Howard Riezman and between us and Harayama lab.
0134
Reposted by Cenk Gurdap
Bruno Stojcic @brunostojcic.bsky.social · 01/04/2026
Happy to see the first work from my PhD out as a preprint! Check out how we use DNA-PAINT SMLM to map the glycosylation effect on Na,K- ATPase clustering. ✨🔬 www.biorxiv.org/content/10.6...
0103
Reposted by Cenk Gurdap
André Nadler @nadlerlab.bsky.social · 23/03/2026
It’s incredibly hard to study lipids in biological membranes on the nanoscale. You need near-perfect information on both membrane ultrastructure and lipid density. Lipid-CLEM, now out in @natcellbio.nature.com brought to you by @mathilda95.bsky.social changes that: www.nature.com/articles/s41...
818864
Reposted by Cenk Gurdap
Sarah Cohen @cohenlaboratory.bsky.social · 16/02/2026
Cells come in many shapes and sizes, with diverse physiological functions. But how do #organelles and their interaction networks remodel during #differentiation of stem cells into different cell types? Here’s what we discovered about neuronal differentiation: 1/13
48838
Reposted by Cenk Gurdap
Jeremy Baskin @jeremybaskin.bsky.social · 05/01/2026
Happy new year! I've so enjoyed the end-of-year lists of people's favorite papers from 2025, so I made a list of 16 #lipidtime studies from 2025 that I found interesting. Here they are in no particular order (please add more if you would like!), and here's to much more exciting science in 2026! 🧪
56625
Reposted by Cenk Gurdap
SciLifeLab @scilifelab.se · 08/12/2025
SciLifeLab researchers Maliheh Mehrshad (SLU) and Camilla Engblom (@ki.se) appointed Wallenberg Academy Fellows ↓ 🧪 “This program gives researchers the chance to pursue high-risk, high-gain research ideas” – @mehrshmali.bsky.social Q&A ↓ www.scilifelab.se/news/long-te... @kawresearch.bsky.social
scilifelab.se
Long-term funding to SciLifeLab researchers: “a huge boost and game-changer to starting a lab”
SciLifeLab researchers Maliheh Mehrshad and Camilla Engblom are appointed Wallenberg Academy Fellows, and receive five-year basic research grants.
1216
Reposted by Cenk Gurdap
strategiska.se @strategiska.bsky.social · 07/11/2025
In fierce competition, 12 projects have now been selected in SSF’s call for proposals “Instrument, technology and method development”. The grants concern the development of new tools and methods that will enable scientific and technological breakthroughs. strategiska.se/en/press-rel...
strategiska.se
They receive 120 million for instrument, technology and method development
011
Reposted by Cenk Gurdap
James Olzmann @olzmannlab.bsky.social · 29/10/2025
Excited to share our study out in @natcellbio.nature.com! Led by @mikelangelipid.bsky.social, we identify the first #LipidDroplet lipid quality control pathway: LD-localized FSP1 protects stored lipids from oxidative damage and prevents LD-initiated #ferroptosis. www.nature.com/articles/s41...
nature.com
FSP1-mediated lipid droplet quality control prevents neutral lipid peroxidation and ferroptosis - Nature Cell Biology
Lange et al. identify a lipid droplet quality control pathway in which FSP1 safeguards stored neutral lipids from lipid peroxidation, thereby preventing the induction of ferroptosis.
612338
Reposted by Cenk Gurdap
SciLifeLab @scilifelab.se · 30/10/2025
Heart ‘blueprint’ made openly available in unique resource 🧪 A detailed map showing how different groups of cells are arranged and how they interact in fetal #HeartDevelopment, now published by SciLifeLab and KTH researchers. ↓ www.scilifelab.se/news/cellula... #OpenAccess #SpatialTranscriptomics
scilifelab.se
Heart ‘blueprint’ made openly available in unique resource
A detailed map of the developing human heart, showing different groups of cells and how they interact in fetal heart development, have been published by a team led by SciLifeLab and KTH Royal Institut...
083
Reposted by Cenk Gurdap
Gioele La Manno @gioelelamanno.bsky.social · 16/10/2025
🧠 The Lipid #Brain Atlas is out now! If you think #lipids are boring and membranes are all the same, prepare to be surprised. Led by @lucafusarbassini.bsky.social with Giovanni D'Angelo's lab, we mapped membrane lipids in the mouse brain at high resolution. www.biorxiv.org/cgi/content/...
7284108
Reposted by Cenk Gurdap
Markus Deserno @markusdeserno.bsky.social · 26/09/2025
I am super excited to announce that we have a tenure-track faculty position in biophysics open in the Department of Physics at Carnegie Mellon! 🧪 Interfolio link: apply.interfolio.com/174360 PLEASE, share widely across the blue skies! Let me briefly explain what we're looking for: 1/10
Tenure-track Position in Biophysics at Carnegie Mellon University, Department of Physics

Location: Pittsburgh, PA
Open Date: Sep 19, 2025

Description
The Department of Physics at Carnegie Mellon University invites applications for a tenure-track faculty position in biophysics. The appointment is intended to be at the Assistant Professor level, but exceptional candidates at a higher level may also be considered. We seek outstanding candidates with a strong record in cellular and subcellular biophysics. Topics of particular interest include, but are not limited to, uncovering how key characteristics of living systems arise from the interplay between supramolecular cellular structures, how the emergent cellular circuitry defines goals and enables robust decision making, and how metabolic resources are allocated. This encompasses understanding of how information is learned, stored, transduced, and processed across subcellular structures. Applicants with theoretical, data science, or experimental backgrounds within biological physics are encouraged to apply. The ideal candidate will strengthen and extend research programs of current biophysics faculty in the Department of Physics and collaborate with broader life science activities across many departments at CMU and the wider Pittsburgh area.

More details on Interfolio: https://apply.interfolio.com/174360
210589
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 07/10/2025
Cell Physics community is missing Jochen Guck deeply.. He was a very kind and generous person, one of the most creative minds, and always ready to help everyone in the field.. He inspired many of us.. He will always be missed..
1395
Reposted by Cenk Gurdap
André Nadler @nadlerlab.bsky.social · 09/10/2025
Lipid imaging on the cover of @nature.com! Great times for lipid cell biology indeed. And a fantastic recognition of all the hard work by the team, especially Juan M. Iglesias-Artola and Kristin Böhlig (who made the cover). Link to article: www.nature.com/articles/s41...
916840
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 25/09/2025
So flattering! Thanks @biophysicalsoc.bsky.social for this deeply meaningful award! All credit goes to my lab members and collaborators. @scilifelab.se @ki.se
8687
Reposted by Cenk Gurdap
Itay Budin @ibudin.bsky.social · 15/09/2025
Very excited to share new work out today in @natchembio.nature.com on a new approach - FACES - for selectively imaging of phospholipids and other biomolecules at spatial resolutions down to individual membrane leaflets (1/n) www.nature.com/articles/s41...
nature.com
Leaflet-specific phospholipid imaging using genetically encoded proximity sensors - Nature Chemical Biology
An approach combining bioorthogonal chemistry with genetically encoded fluorogen-activating proteins enables subcellular imaging of phospholipids and glycans, as well as the visualization of lipid tra...
716369
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 08/09/2025
Previous preprint is now published in RSC Chemical Biology. If you are interested in plasma membrane labeling, see the paper! 👇 pubs.rsc.org/en/content/a...
pubs.rsc.org
Plasma membrane labelling efficiency, internalization and partitioning of functionalized fluorescent lipids as a function of lipid structure
Labeling the plasma membrane for advanced imaging remains a significant challenge. For time-lapse live cell imaging, probe internalization and photobleaching are major limitations affecting most membr...
09738
Reposted by Cenk Gurdap
André Nadler @nadlerlab.bsky.social · 21/08/2025
Out today in @nature.com: Together with the Honigmann, Shevchenko, Drobot and Hof labs, we present a general workflow for imaging the localization and transport of individual lipids in cells and mapping their metabolism. www.nature.com/articles/s41...
31346130
Reposted by Cenk Gurdap
Jan Schlegel @jan-schlegel.bsky.social · 30/06/2025
EBSA 2025 just started - please make sure to stop by the poster of Shahinez Hanna-Elias who is presenting our work on "High-Throughput, Multiparametric Platform for Screening Homophilic Receptors in Host-Virus Binding" tomorrow between 12:15 - 14:45 in the category "Cellular Biophysics in Diseases"
052
Reposted by Cenk Gurdap
Abishek Arora, PhD @aroraneuro.bsky.social · 10/06/2025
📢 Happy to share our latest preprint investigating how prenatal #SSRI exposure may effect early #neurodevelopment by inducing #metabolic changes in iPSC-derived neural cells 🧠 and human cord-blood samples 🧪 tinyurl.com/y3n4amz6
tinyurl.com
Lysophosphatidylcholines are elevated after selective serotonin reuptake inhibitor exposure during neural differentiation and correlate with early neurodevelopmental symptoms
Selective serotonin reuptake inhibitors (SSRIs) are often prescribed during pregnancy. Yet, epidemiological studies associate in-utero SSRI exposure with neurodevelopmental disorders, such as autism a...
184
Reposted by Cenk Gurdap
Coskun Lipid Cellar @ ZML Dresden @lipid.bsky.social · 09/05/2025
An amazing new enabling technology. Measurements of molecular size and shape on a chip. Couldn't be prouder of our friend Madhavi Krishnan of @ox.ac.uk this was and is one among the must fun collaborations I ever had. www.science.org/doi/10.1126/...
science.org
Measurements of molecular size and shape on a chip
Size and shape are critical discriminators between molecular species and states. We describe a microchip-based high-throughput imaging approach offering rapid and precise determination of molecular pr...
87035
Reposted by Cenk Gurdap
Dimova Lab @dimovalab.bsky.social · 09/05/2025
📢 Registration is open for the Biomembrane Days 2025! 🔗 biomembrane-days-2025.mpikg.mpg.de A top-notch lineup of speakers, 120 posters, 200 scientists. 📜Submit an abstract by July 14 🏆3 Poster prizes ⚠️Limited spots-previous events were fully booked! #BiomembraneDays2025 #Biophysics #CellMembranes
biomembrane-days-2025.mpikg.mpg.de
1228
Reposted by Cenk Gurdap
André Nadler @nadlerlab.bsky.social · 06/05/2025
Why are biological membranes asymmetric, with different lipids in the two bilayer leaflets? Discovered in the 70s, lipid asymmetry is linked to many cellular processes, but why the cell needs it is largely unclear. @pavelbarahtjan.bsky.social addresses this question: www.biorxiv.org/content/10.1...
612249
Reposted by Cenk Gurdap
Jeremy Baskin @jeremybaskin.bsky.social · 03/04/2025
Groundbreaking study in Cell from @leventallab.bsky.social: phospholipid asymmetry is a defining feature of the plasma membrane and cholesterol fills the holes — major implications for how this membrane works. A #lipidtime must-read! www.cell.com/cell/abstrac...
cell.com
Cell membranes sustain phospholipid imbalance via cholesterol asymmetry
This work challenges a major assumption in cell biology by showing that lipid bilayers can have drastically different phospholipid abundances between their two leaflets. This lipid abundance asymmetry...
219980
Cenk Gurdap @cenkgurdap.bsky.social · 24/02/2025
Check it out to learn how easily you can measure membrane fluidity of your cells 👇🏻
083
Reposted by Cenk Gurdap
Job Boekhoven @boekhovenlab.bsky.social · 07/02/2025
It’s out!😃 2 years ago, I organized a workshop with @WebersGroup and @KGoepfrich on how to build Life. We discussed with leading scientists by day and wrote up our discussions in the eves. The "Roadmap Towards Synthetic Life" is now out in Chem! www.sciencedirect.com/science/arti...
sciencedirect.com
A roadmap toward the synthesis of life
The synthesis of life from non-living matter has captivated and divided scientists for centuries. This bold goal aims at unraveling the fundamental pr…
23213
Reposted by Cenk Gurdap
Erdinc Sezgin @sciezgin.bsky.social · 30/01/2025
New paper out💥 in Nano Letters @pubs.acs.org High throughput single particle profiler with simple confocal imaging. We used this new method to study protein-lipid interactions, drug membrane interactions and biophysics of small particles from human donors: pubs.acs.org/doi/10.1021/...
pubs.acs.org
Imaging Single Particle Profiler to Study Nanoscale Bioparticles Using Conventional Confocal Microscopy
Single particle profiling (SPP) is a unique methodology to study nanoscale bioparticles such as liposomes, lipid nanoparticles, extracellular vesicles, and lipoproteins in a single particle and high t...
03815