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Alessia Buscaino

@buscainolab.bsky.social
508 followers 379 following 9 posts

Fungal Biologist with love for pathogens and biotech. Non coding RNAs and chromatin

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Reposted by Alessia Buscaino
Quadram Institute @quadraminstitute.bsky.social · 13/01/2026
🆕 Vacancy! We are looking for a Research Scientist (Bioinformatics) to join @buscainolab.bsky.social to work on the interplay between Candida albicans and gut bacterial adaptation, with a focus on RNA interference. 💷 £37,500 to £45,350 🗓️ Apply by 8 February 2026 ➡️ buff.ly/q7SP1mC
A microscope image of candida and the Quadram logo with the text "Research Scientist (Bioinformatics), to work on the interplay between Candida albicans and gut bacterial adaptation, with a focus on RNA interference. Salary: £37,500 to £45,350, Contract length: 2 years. Apply by 8 February 2026"
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Quadram Institute @quadraminstitute.bsky.social · 10/12/2025
🆕 New project uncovering the role of a molecular switch in Candida albicans infections. Professor @buscainolab.bsky.social will lead a new study investigating how fungi adapt to life in the human gut, to address the growing global health challenge of fungal infections. buff.ly/FGzNwWS
quadram.ac.uk
What causes Candida infections? - Quadram Institute
A new study will investigate Candida infections to understand how fungi adapt to the human gut and address the challenge of fungal infections
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Robert Arkowitz @robertarkowitz.bsky.social · 05/09/2025
journals.plos.org/plosbiology/...
journals.plos.org
Gut fungi are associated with human genetic variation and disease risk
In contrast to decades of research on gut bacteria, human genetic determinants of the gut fungal community (mycobiome) remain understudied. This investigation presents the first GWAS on the number and...
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Reposted by Alessia Buscaino
Robert Arkowitz @robertarkowitz.bsky.social · 31/07/2025
Escherichia coli with a 57-codon genetic code | Science www.science.org/doi/10.1126/...
science.org
Escherichia coli with a 57-codon genetic code
The near-universal genetic code uses 64 codons to encode the 20 canonical amino acids and protein synthesis. Here we designed and generated Escherichia coli with a 4 Mb synthetic genome in which we re...
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Alessia Buscaino @buscainolab.bsky.social · 04/07/2025
After more than 10 years at the @kent.ac.uk , my lab will move to the @quadraminstitute.bsky.social ! I’m sad to leave behind amazing friends, but excited to start a new chapter. The good news? My lab members will be making the move with me, and we’ll advertise several new positions.
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Maribel Navarro Mendoza @maribelnm.bsky.social · 04/06/2025
I'm thrilled to share that I've joined the Universidad Miguel Hernández in Spain as an Assistant Professor of Microbiology! Excited for this new chapter and the opportunities ahead.
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Amelia Barber @ameliabarberphd.bsky.social · 22/05/2025
I am honoured and delighted to join the #CIFAR family as an Azrieli Global Scholar. Looking forward to working with this fantastic community to tackle complex global challenges through interdisciplinary collaboration! cifar.ca/cifarnews/20...
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Ben Lehner @benlehner.bsky.social · 04/05/2025
We quantify the aggregation of >100,000 random protein sequences to train CANYA, a convolution-attention hybrid neural network to predict aggregation from sequence. With @bennibolo.bsky.social www.science.org/doi/10.1126/...
science.org
Massive experimental quantification allows interpretable deep learning of protein aggregation
xAI trained on >100,000 random peptides predicts and elucidates primary sequence determinants of aggregation.
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Simons Foundation @simonsfoundation.org · 15/05/2025
When it comes to building a healthy community of helpful microbes in the gut, a new study in Nature from our EVP of Life Sciences Joy Bergelson and collaborators finds one factor matters most: diet. www.simonsfoundation.org/2025/05/13/t... #science #lifesciences
simonsfoundation.org
To Restore Your Gut Health, a Healthy Diet Matters Most
To Restore Your Gut Health, a Healthy Diet Matters Most on Simons Foundation
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Max Haase @maxhaase.bsky.social · 25/04/2025
It’s out! The evolutionary origins of yeast point centromeres uncovered! “Ancient co-option of LTR retrotransposons as yeast centromeres” www.biorxiv.org/content/10.1...
biorxiv.org
Ancient co-option of LTR retrotransposons as yeast centromeres
The evolutionary origins of the genetic point centromere in the brewer's yeast Saccharomyces cerevisiae, a member of the order Saccharomycetales, are still unknown. Competing hypotheses suggest that t...
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Amelia Barber @ameliabarberphd.bsky.social · 17/04/2025
Are you interested in a postdoc in Germany on fungal pathogen biology, genomics, or antifungal resistance? My Uni (@uni-jena.de) is hosting a free two-day masterclass in June on preparing MSCA Postdoc Fellowships with it as host. If you are interested in writing a fellowship with me, get in touch!
An image that reads: Friedrich Schiller University Jena: Preparing your application for a MSCA Postdoctoral Fellowship hosted by the University of Jena. Invitation for a Master class.A medium sized German city. On the right is a picteruesque river in the glowing daybreak. Around the city are gently rolling, green hills.
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Petr Svoboda @svobodalab.bsky.social · 21/01/2025
1/n So, this is out in NAR, finally. The longest, the most expensive and the most challenging project in the lab. Sparked by controversy concerning mammalian antiviral RNAi and our identification of Dicer variant, which is sufficient to increase RNAi. doi.org/10.1093/nar/...
doi.org
Enhanced RNAi does not provide efficient innate antiviral immunity in mice
Abstract. In RNA interference (RNAi), long double-stranded RNA is cleaved by the Dicer endonuclease into small interfering RNAs (siRNAs), which guide degra
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Daniel Croll @danielcroll.bsky.social · 10/01/2025
Wonderful 🚀 work on Verticillium out by the Thomma team!
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Reposted by Alessia Buscaino
Christian Landry @christianlandry.bsky.social · 09/01/2025
While writing papers and grants, we received many comments on the role of CNVs in antifungal resistance. We thought we should formally assess how important they are. Here is what we found. #AMR #fungi #evolution rdcu.be/d5rbN
nature.com
The role of gene copy number variation in antimicrobial resistance in human fungal pathogens
npj Antimicrobials and Resistance - The role of gene copy number variation in antimicrobial resistance in human fungal pathogens
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Alessia Buscaino @buscainolab.bsky.social · 21/12/2024
It was a pleasure to write a commentary on the work by @jhuang90.bsky.social and the Heitman Lab, exploring how RNAi and transposons drive intraspecies diversity in Cryptococcus. 🧬 #DrugResistance #RNAi www.pnas.org/doi/10.1073/...
pnas.org
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Anthony Amend @fungaloha.bsky.social · 06/12/2024
Proud of our new paper in which we force-feed plastic to marine fungi, and watch them evolve to eat it more efficiently. Plastic is the fastest growing new habitat on our planet, fungi can help recycle it. www.tandfonline.com/doi/full/10.... Hereʻs a link to the PDF: amendlab.com/wp-content/u...
Me with a chunk of live rock in Kaneohe bay
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Shen Tian 田申 @tianshenbio.bsky.social · 05/12/2024
Our miRNA story is now in @science.org ! We found a microRNA, not a protein, that finally solved a long-standing evolutionary mystery of wing coloration in butterflies and moths. (1/n) www.science.org/doi/10.1126/...
science.org
A microRNA is the effector gene of a classic evolutionary hotspot locus
In Lepidoptera (butterflies and moths), the genomic region around the gene cortex is a “hotspot” locus, repeatedly implicated in generating intraspecific melanic wing color polymorphisms across 100 mi...
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Jacki Heraud-Farlow @jackiheraudfarlow.bsky.social · 06/12/2024
Time for a 🧵 on our new paper from the Walkley lab in @scienceimmuno.bsky.social. If you're into RNA editing by ADARs, double-stranded RNA (dsRNA) sensing, post-transcriptional gene regulation and CRISPR screening, then read on! 1/X www.science.org/doi/10.1126/... #RNASky #ImmunoSky
science.org
GGNBP2 regulates MDA5 sensing triggered by self double-stranded RNA following loss of ADAR1 editing
GGNBP2, CNOT10, and CNOT11 are required for innate immune response after the loss of ADAR1-mediated editing of self dsRNA.
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Bluesky @bsky.app · 03/12/2024
Scientists, academics, researchers: We’re excited to share that @altmetric.com is now tracking mentions of your research on Bluesky! 🧪
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Fitz-James Lab @fitz-james-lab.bsky.social · 02/12/2024
We are advertising for a project looking at epigenetic inheritance in Drosophila at the Department of Biology, University of Oxford @oxfordbiology.bsky.social Please get in touch if you are interested! Only 1 month left to be considered for funding. www.findaphd.com/phds/project...
findaphd.com
How is epigenetic information inherited across generations in insects? at University of Oxford on FindAPhD.com
PhD Project - How is epigenetic information inherited across generations in insects? at University of Oxford, listed on FindAPhD.com
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Robert Arkowitz @robertarkowitz.bsky.social · 01/12/2024
Go red: « The mScarlet family of fluorescent proteins keeps growing! Meet mScarlet3-H (aka mYongHong), an ultrastable RFP ideal for many advanced microscopy applications. Plasmids are now available via WeKwikGene! wekwikgene.wllsb.edu.cn/plasmids?sea... »
x.com
x.com
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Nivedita Sarveswaran @neuroniv.bsky.social · 01/12/2024
Looking forward to this! Ben’s reputation as brilliant neurobiologist who made strides in glial research, as well as being a compassionate mentor, is really inspiring. Highly recommend “The Autobiography of a Transgender Scientist” for anyone who’d like to learn more.
Book cover for The Autobiography of a Transgender Scientist, a plain pastel green background.
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Jonathan Eisen @phylogenomics.bsky.social · 30/11/2024
Quite a comprehensive piece of work: "Gut physiology and environment explain variations in human gut microbiome composition and metabolism." www.nature.com/articles/s41... Definitely worth checking out if you work on animal microbiomes, especially in the gut
nature.com
Gut physiology and environment explain variations in human gut microbiome composition and metabolism - Nature Microbiology
An observational longitudinal clinical trial, incorporating a SmartPill and metabolomics, reveals the role of host factors in shaping the gut microbiome in healthy human adults.
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Alessia Buscaino @buscainolab.bsky.social · 30/11/2024
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Rebecca Drummond 🍄 @therad-lab.bsky.social · 29/11/2024
Super interesting new study from the Iliev group on a natural fungal commensal of mice - really important for folks studying #microbiome in mouse models www.nature.com/articles/s41...
nature.com
Fungal symbiont transmitted by free-living mice promotes type 2 immunity - Nature
Kazachstania pintolopesii is a highly prevalent fungal symbiont that can trigger type 2 immunity and influence the composition of the gut mycobiome, as well as immune and disease phenotypes.
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Robert Arkowitz @robertarkowitz.bsky.social · 29/11/2024
journals.plos.org/plospathogen...
journals.plos.org
Trim72 is a major host factor protecting against lethal Candida albicans infection
Author summary Candida albicans is an important cause of fungal infections associated with high mortality rates, and the lack of effective treatment options emphasizes the urgency to develop new antif...
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Andrew S. MacDonald @profandrewmac.bsky.social · 29/11/2024
Fascinating new paper about how commensal #fungi can promote #type2 responses in mice, a process involving fungal induction of #IL-33 🍄 🧪 #ImmunoSky www.nature.com/articles/s41...
nature.com
Fungal symbiont transmitted by free-living mice promotes type 2 immunity - Nature
Kazachstania pintolopesii is a highly prevalent fungal symbiont that can trigger type 2 immunity and influence the composition of the gut mycobiome, as well as immune and disease phenotypes.
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Reposted by Alessia Buscaino
Michael Brockhurst @brockhurstlab.bsky.social · 29/11/2024
2x professorships available in Manchester Institute of Biotechnology including in Microbial Engineering area (broadly defined to include microbiomes, environmental biotech etc) — join us! www.jobs.manchester.ac.uk/Job/JobDetai...
jobs.manchester.ac.uk
Chair Appointments within Manchester Institute of Biotechnology:Manchester Institute of Biotechnology
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Willem van Schaik @wvschaik.bsky.social · 28/11/2024
Useful benchmarking study 'Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection' www.nature.com/articles/s41...
nature.com
Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection - Scientific Reports
Scientific Reports - Evaluation of DNA extraction kits for long-read shotgun metagenomics using Oxford Nanopore sequencing for rapid taxonomic and antimicrobial resistance detection
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Alessia Buscaino @buscainolab.bsky.social · 29/11/2024
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Judith Berman @judithberman11.bsky.social · 28/11/2024
Yeast dividing til starved
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Darren Obbard @darrenobbard.bsky.social · 27/11/2024
#PhD Advert: Please share! Are you looking for a PhD studentship in comparative- or population-genomics, using 300+ species of #Drosophila and 1000+ genomes of #melanogaster? #Entomology #Genomics #PopGen #Phylogenetics
Diverse species of Drosophilidae
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Jason Stajich @hyphaltip.bsky.social · 27/11/2024
Early Registration for ECFG17 satellite meetings on 2 March are still open till Dec 6. The Basal (zygos and chytrids) Fungal Symposium should be a a fun one to participate in! www.ecfg17.org
Flier listing dates and times for basal fungal symposium at ECFG17 and reminder to register before Dec 6
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Robert Arkowitz @robertarkowitz.bsky.social · 26/11/2024
journals.asm.org/doi/10.1128/...
journals.asm.org
Hidden allies: how extracellular vesicles drive biofilm formation, stress adaptation, and host–immune interactions in human fungal pathogens | mBio
Fungal pathogens pose a significant risk to human health, causing approximately 6.5 million invasive infections and 3.8 million deaths yearly (1–3). The populations most vulnerable to systemic fungal ...
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José Vargas-Muñiz @mycorican.bsky.social · 13/11/2024
We are still recruiting postdoctoral fellows! We are looking for individuals interested in human pathogens and their response to antifungals. An NIH R01 fully funds this project. This project involves genetic, cell biology, microscopy, and proteomics approaches! Please RT 🙏🏽
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Science News @scinews.bsky.social · 23/11/2024
How to write an excellent Review article @natrevbioeng.bsky.social #scisky #Science #REVIEW Open Access www.nature.com/articles/s44...
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Madhu Pai, MD, PhD @madhupai.bsky.social · 24/11/2024
Non-native English speakers need 50% more time to write a paper When they do, they face a 2.5 times higher chance of being rejected because of language journals.plos.org/plosbiology/...
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Itai Yanai @itaiyanai.bsky.social · 24/11/2024
70% of scientists say they experience the imposter syndrome. I still experience it too sometimes, and what helps is talking with a science buddy with whom it’s ok to say stupid things, which may actually turn out to be good ideas.
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Jon Lim, FRCP PhD @drjonlim.bsky.social · 23/11/2024
🎨 In case anyone need… The NIH BioArt Source is an awesome library of *free* professionally drawn illustrations for scientific presentations or figures. Downloadable in HD. Thank you NIH for this invaluable tool 🙏! Check it out 👇 bioart.niaid.nih.gov
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Seema @molbioinfo.bsky.social · 23/11/2024
RNA-mediated DNA damage repair: www.nature.com/articles/s41... #RNAbiology #RNAsky
nature.com
RNA-mediated double-strand break repair by end-joining mechanisms - Nature Communications
Double-strand breaks (DSBs) in DNA are challenging to repair. Here, the authors show that transcript RNAs impact the DSB repair outcomes in human and yeast cells by promoting NHEJ or MMEJ in a sequenc...
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Andrew Mendiola @andrewmendiola.bsky.social · 20/11/2024
I created a simple flow chart to help my lab trainees choose the most appropriate stats test in Prism (*for single-factor comparisons only). Feel free to share with your group if you think it could be helpful first start.
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