A snakelike pipeline combining ggCaller and Panaroo. - samhorsfield96/ggCallaroo

Working with us

Nature Biotechnology - A long-read metagenome assembly method recovers circular and complete genomes better than existing tools.

Bifrost graph gene caller. Contribute to bacpop/ggCaller development by creating an account on GitHub.

Karel Břinda sheds light on how curiosity, mobility, and interdisciplinarity can shape a modern researcher’s path in a world where science increasingly transcends borders.

Investigating whether Basecamp Research found hundreds of thousands of bacteria species

Latest AlphaFold Database update adds high-value datasets for microbial and viral proteins, generated by specialist communities

Performing pandemic-scale phylogenetic analysis poses multifaceted challenges. This study develops methods for identifying and accounting for mutation rate variation and recurrent sequence errors, lea...

Openings

Tracing how software and algorithms follow the hardware.

Contribute to baymlab/deletion-born-fusion-manuscript development by creating an account on GitHub.

New online portal connects bacterial genomes with experimental resistance data to support antimicrobial resistance research.

Compute bottom-s sketches and s-buckets sketches, using simd-minimizers crate. - RagnarGrootKoerkamp/simd-sketch

Antibiotic resistance is frequently observed shortly after the clinical introduction of an antibiotic. Whether and how frequently that resistance occurred before the introduction is harder to determin...

Historically, our understanding of microbes has been based on laboratory cultures. Much of what we know at a mechanistic level is based on “model organisms” which are species that readily grow in labo...

Abstract. Bacterial genomes exhibit significant variation in gene content and sequence identity. Pangenome analyses explore this diversity by classifying g