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Emily Hyde

@emilyraehyde.bsky.social
276 followers 387 following 10 posts

PhD student in the Baker Microbial Ecology lab with a passion for aquatic systems, microbes, evolution, biogeochemistry and STEM accessibility 🧬🧫 🏳️‍🌈views my own

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Reposted by Emily Hyde
CNN @cnn.com · 05/03/2026
Scientists are one step closer to understanding the origins of complex life on Earth after shedding new light on a mystery about our microbial ancestors. cnn.it/4srOEWd
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Brett Baker @archaeal.bsky.social · 18/02/2026
New paper from my team detailing a greatly expanded genomic database of Asgard archaea revealing of high energy metabolism those related to eukaryotes! Led by @katyappler.bsky.social lots of help from @jameslingford.bsky.social @valdeanda.bsky.social @kassipan.bsky.social doi.org/10.1038/s415...
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Emily Hyde @emilyraehyde.bsky.social · 04/02/2026
Has anyone had success using the Qiagen AllPrep PowerFecal Kits with sediment? Really would love to hear feedback about you experience, hoping to use this kit for DNA/RNA extractions! #microbiome #microbe #metagenomics #metatranscriptomics #DNAextractions
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Karen Lloyd @karenlloyd.bsky.social · 18/12/2025
My article on aeonophiles (ultra-long lived organisms) came out in Aeon Magazine today!
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Buzz Baum @buzzbaum.bsky.social · 16/12/2025
Are you a long-time fan of Archaea, an extremophile-phile, or are you simply curious? Either way, we have good news. We’re delighted to announce the 2026 EMBO Workshop on Archaea, 6–10 July. Sign up: meetings.embo.org/event/26-arc... We look forward to seeing you in Cambridge, UK. Please repost!
meetings.embo.org
Molecular Biology of Archaea: Life Through the Prism of Archaea
In 1977, Woese and colleagues revealed Archaea as a distinct domain of life. Building on this insight, the discovery of Asgard archaea has strengthened the view that many hallmarks of eukaryotic cell…
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Cameron Thrash @jcamthrash.bsky.social · 04/12/2025
Oxygen production as an electron overflow pathway in ammonia-oxidizing archaea www.biorxiv.org/content/10.6... #jcampubs
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Brett Baker @archaeal.bsky.social · 30/11/2025
A bunch of activity in the Falkor (too) hangar today. Diving now....https://www.youtube.com/@SchmidtOcean #AsgardArchaea @schmidtocean.bsky.social @moorefound.bsky.social @texasscience.bsky.social @utmsi.bsky.social
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Buzz Baum @buzzbaum.bsky.social · 25/11/2025
The sediment in these cores is pungent. ‘Smells like a new phylum’ says Stavros. We are all hoping for a new old one.
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Sarah McAnulty, Ph.D. @sarahmackattack.bsky.social · 22/11/2025
ARTISTS! I need your help! In collab. w/the Society for Integrative & Comparative Biology, I'm organizing a group of artists to come to our Jan. meeting! We're looking for artists to create based on what they learn at the conference. $1000 stipend. Application is V short! forms.gle/ah1i8KwNJinZ...
A picture of a frog on a leaf with the SICB and Skype a Scientist logos on the bottom right with the following words on top: "Call for Artists!" Learn about the latest animal research adn create art inspired by the science at the SICB meeting in Portland, OR. Deadline to apply: dec 12, Project dates Jan 3-7, Stipend $1000"
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Emily Hyde @emilyraehyde.bsky.social · 21/11/2025
I love late night science and extractions are one of the most rewarding ways to spend an evening when we get to sequence right on board! Having a wonderful time doing real time metagenomics on the Falkor (too)! @emaguilarpine.bsky.social @moorefound.bsky.social @schmidtocean.bsky.social
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Reposted by Emily Hyde
Schmidt Ocean Institute @schmidtocean.bsky.social · 21/11/2025
#AsgardArchaea team, led by @archaeal.bsky.social fr @texasscience.bsky.social — sequencing the DNA collected fr mouth of Rio de la Plata to the continental shelf of Uruguay to detect Asgards, a group of single-celled organisms & our closest microbial relatives on the tree of life. bit.ly/3MdniTH
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Brett Baker @archaeal.bsky.social · 21/11/2025
Today's dive site, to ~2,200m. We will be streaming 9am-3pm Central. At www.youtube.com/@SchmidtOcean #AsgardArchaea @schmidtocean.bsky.social @moorefound.bsky.social @texasscience.bsky.social @utmsi.bsky.social
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Buzz Baum @buzzbaum.bsky.social · 18/11/2025
Other researchers in action on Falkor (too)
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Brett Baker @archaeal.bsky.social · 14/11/2025
Starting at 7pm Central I will be streaming from the bottom of the ocean off the coast of Uruguay! Feel free to join and ask questions. www.youtube.com/@SchmidtOcean
youtube.com
Schmidt Ocean
Our Purpose: to excite interest and inform the wise stewardship of our planet. Our Mission: Catalyze the discoveries needed to understand our ocean, sustain life, and ensure the health of our planet ...
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Brett Baker @archaeal.bsky.social · 11/11/2025
The science team have boarded the Falkor (too)! #AsgardArchaea @schmidtocean.bsky.social @moorefound.bsky.social
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Brett Baker @archaeal.bsky.social · 21/10/2025
schmidtocean.org/cruise/searc...
schmidtocean.org
Searching for the Asgard - Schmidt Ocean Institute
The Malvinas Current offshore of Argentina — a branch of the Antarctic Circumpolar Current — carries nutrients and cold water from the south, boosting primary productivity in the Southwest Atlantic Oc...
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Brett Baker @archaeal.bsky.social · 18/09/2025
Baker Lab 2025 The container is our field gear for the research expedition for Uruguay. sites.utexas.edu/baker-lab/sp...
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Roland Hatzenpichler @environmicrobio.bsky.social · 19/07/2025
In a couple of days, my grad student Stavros Trimmer will present his new Asgard archaea culture at the GRC Archaea. He named it Skadiarchaeum after Skadi, the Norse goddess of skiing and hunting. Cartoon of Skadi based on cryoET, which was performed together with with @florianwollweber.bsky.social
A cartoon depiction of the Asgard archaeon Skadiarchaeum sp., named after the Norse goddess of skiing and hunting, Skadi.
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Jonathan Eisen @phylogenomics.bsky.social · 12/07/2025
Today's reading: Nature should be the model for microbial sciences journals.asm.org/doi/10.1128/... by @brettbakker.bsky.social @emilyraehyde.bsky.social and @pedroleao.bsky.social Looks ideal for a talk I am working on on model organisms ...
journals.asm.org
Nature should be the model for microbial sciences | Journal of Bacteriology
Historically, our understanding of microbes has been based on laboratory cultures. Much of what we know at a mechanistic level is based on “model organisms” which are species that readily grow in labo...
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Brett Baker @archaeal.bsky.social · 21/06/2025
Title: The phylogeny and metabolism underlying the global dominance of the freshwater Nanopelagicaceae lineage Short Talk Symposia: Hot Topics in Microbial Diversity and Systematics Session  6/21/2025 1:45- 3:45:00 403A Presentation Time: 3:15:00 PM
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Brett Baker @archaeal.bsky.social · 20/06/2025
Tomorrow at 12:45-1:30 in the EEB Track Hub in the poster hall #ASMmicrobe I am talking about microbial diversity including Asgard archaea, and an expanded tree of life from marine sediments.
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Brett Baker @archaeal.bsky.social · 20/06/2025
Today at ASM Microbe - Carbon Cycling & Methylotrophy In Deep-Sea Hydrothermal Sediments Presentation Number: 5699 Date: Friday June 20th Time - Poster (10:30-11:30am, 4-5pm) AND Rapid Fire Talk (11:45-12:30pm) @emilyraehyde.bsky.social
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Bruno Francesco Rodrigues de Oliveira @bfrancescol.bsky.social · 19/06/2025
Protect the transgender scientists 🏳️‍⚧️ A pleasure to be part of the AQTES group, so many amazing and inspiring scientists! No better time to see this piece published. Happy Pride Month 🌈
science.org
Protect transgender scientists
Transgender and gender nonconforming (TGnC) people are a primary target of the Trump administration. Multiple executive orders seek to erase TGnC protections; mandate denial of gender identity; and ba...
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Reposted by Emily Hyde
Brett Baker @archaeal.bsky.social · 19/06/2025
The Baker Lab is invading LA for #ASMMicrobe
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Emily Hyde @emilyraehyde.bsky.social · 19/06/2025
Officially arrived at my first ASM! My poster is tomorrow in the EEB01 Microbial Ecology session (10:30-11:30am & 4-5pm) + I have a rapid talk at 11:45 in the EEB Track Hub! Can’t wait to chat with you all this weekend! 🧫
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Pedro Leão @pedroleao.bsky.social · 16/06/2025
"In a competitive academic world, building bridges instead of walls may be our most powerful tool to accelerate discovery and rebuild public trust in science." I'm very happy with this article piece! 🥳 www.the-scientist.com/science-thri...
the-scientist.com
Science Thrives on Trust: Why Collaboration Is Our Greatest Strength
In a competitive academic world, building bridges instead of walls may be our most powerful tool to accelerate discovery and rebuild public trust in science.
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Emily Hyde @emilyraehyde.bsky.social · 17/06/2025
Got to visit one of my favorite places this weekend where I started studying large lakes and the microbes that run them! 🌊
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Mark O. Martin @markowenmartin.bsky.social · 23/05/2025
Thursday! Episode 92 of #MattersMicrobial! Dr. Valerie DeAnda Torres of the University of Florida joined the #QualityQuorum to discuss the work of her research group in studying evolution of metabolic pathways in the deep ocean. Please spread the #GoodMicrobialWord! youtu.be/nNcXGmh9CZo?...
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Ocean Acidification Research Center @uaf-oarc-alaska.bsky.social · 11/05/2025
It’s a tad breezy today. #AlaskaSky #DY2504 🧪🌊🦑
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Emily Hyde @emilyraehyde.bsky.social · 07/05/2025
personal survival training in Louisiana the past two days to help us get ocean ready! 🌊⛴️
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Emily Hyde @emilyraehyde.bsky.social · 21/03/2025
Abstract accepted, all registered and hotel is booked for ASM Microbe 2025! This will be my first Microbe conference, excited to give a rapid fire talk + poster & meet everyone! 🧬
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James Tuttle Keane @jtuttlekeane.bsky.social · 10/03/2025
little displays of kindness on the #LPSC2025 “artistic creations” board
A close-up photograph of the “artistic creations board “at LPSC 2025. It is a black pushpin board, with no cards that participants have colored, written on, placed stickers on. there are five cards in this scene, and three of them are about LGBTQ people. The top one, and my favorite, is a trans pride flag in blue pink and white, with some moon stickers in a row on the top and bottom, and in the middle, it says “the moon is trans“. In the middle is a placard that says space is for everyone next to a rainbow colored ringed planet. Below that is a sketch of the moon with a giant inclusive pride flag sticking out of it, and the text “space ( and NASA science) is for everyone.”
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James Tuttle Keane @jtuttlekeane.bsky.social · 12/03/2025
Soraya Alfred—Impacts aren’t all bad! Impacts, like Chicxulub, can generate porosity, permeability, heat, and fluid flow that creates self-sustaining subsurface ecosystems. #LPSC2025
A photograph of a sketch of Soraya Alfred’s talk at LPSC 2025. The sketch is in my small conference notebook. and there are pens/pencils below it for scale. The sketch is dominated on the left side of the page with a perspective view of the Chicxulub impact crater. On the left side you see the impact happening, with a big ejecta blanket rocketing into the sky. On the right side you see the crater some time later: a complex crater with a peak ring, partially filled by water. Below that sketch is a little sketch of a T rex, “about to have a bad day.” To the right is a cross section of the “after” case for Chicxulub, showing a cross section of the peak ring structure, colored by temperature (yellow = hot, blue = cold). In the downwarped sediment layers, there are streamlines (in green/blue) showing that fluid is brought from the warm depths up to the surface, and back down. This supports ecosystems at depth below the surface.
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Spencer Aloysius @spenecer.bsky.social · 23/01/2025
Grant review panels have been halted at NIH. 🧪 www.science.org/content/arti...
science.org
Trump hits NIH with ‘devastating’ freezes on meetings, travel, communications, and hiring
Researchers facing “a lot of uncertainty, fear, and panic”
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Li Li (李黎) @lireactivewater.bsky.social · 03/01/2025
Happy new year! Thrilled to announce Women Advancing River Research (WARR) 2025, featuring inspiring women on water research from around the world. 11 am, US eastern, 3rd Thursday every month. Register: psu.zoom.us/meeting/regi... Recordings 2021- 2024: www.cee.psu.edu/events/women...
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Texas Science @texasscience.bsky.social · 03/01/2025
Using the longest metagenome time series ever collected from a natural system, research led by UT postdoc Robin Rohwer finds Wisconsin lake bacteria in a kind of endless evolutionary loop that they can’t seem to shake. @robinrohwer.bsky.social @archaeal.bsky.social cns.utexas.edu/news/researc...
cns.utexas.edu
Some Bacteria Evolve Like Clockwork With the Seasons
The longest natural metagenome time series ever collected, with microbes, reveals a startling evolutionary pattern on repeat.
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Nature Microbiology @natmicrobiol.nature.com · 03/01/2025
OUT NOW Twenty years of bacterial ecology and evolution in a freshwater lake @archaeal.bsky.social @quendi.bsky.social @robinrohwer.bsky.social www.nature.com/articles/s41...
nature.com
Two decades of bacterial ecology and evolution in a freshwater lake - Nature Microbiology
A 471-metagenome time series from Lake Mendota in Wisconsin, USA, reveals seasonal and decadal shifts in bacterial functional and ecological dynamics, especially in response to environmental extremes.
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Brett Baker @archaeal.bsky.social · 03/01/2025
After 24 years of work, I’m thrilled to announce the TYMEFLIES dataset, which comprises metagenomes from Lake Mendota (Madison, WI), collected roughly every 10 days (471 samples) for 20 years! @quendi.bsky.social @robinrohwer.bsky.social rdcu.be/d5put A thread…
rdcu.be
Two decades of bacterial ecology and evolution in a freshwater lake
Nature Microbiology - A 471-metagenome time series from Lake Mendota in Wisconsin, USA, reveals seasonal and decadal shifts in bacterial functional and ecological dynamics, especially in response...
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Samuel Aroney @aroneys.bsky.social · 26/11/2024
Excited to share “Bin Chicken”, substantially improving genome recovery through rational metagenomic assembly. Applied to public 🌍 metagenomes, it recovered 24,000 novel species 🦠, including 6 novel phyla. doi.org/10.1101/2024... @wwood @rhysnewell @CMR_QUT 🧵1/6
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Dr Margaux Steyaert 🪸 @margauxsteyaert.bsky.social · 25/11/2024
A list of #marinebiology starter packs! 🌊 go.bsky.app/4PTX62K Marine Ecology go.bsky.app/RS5zQHv Marine Biologists I go.bsky.app/8DoyTMs Marine Biologists II go.bsky.app/Qo5Gh2H Coral reef science go.bsky.app/E8vrnd6 LGBTQIA+ Grads go.bsky.app/7MdiLgo Ocean Women go.bsky.app/4wMsfX4 Ocean Women II
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Emily Hyde @emilyraehyde.bsky.social · 19/11/2024
Happy International Pride in STEM Day! I’m a queer 🏳️‍🌈 & intersex 💛💜 aquatic microbial ecologist in my second year of my PhD studying carbon cycling at hydrothermal vents. LGBTQIA+ representation is important & I’m proud to be part of the amazing queer community in ecology & micro. #PrideInSTEM
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Pride in STEM @prideinstem.bsky.social · 18/11/2024
November 18 is the International Day of LGBQTIA+ People in STEM! Today more than ever we want to stress the importance of communities, building connections, and raising each other up. Let's keep leaving our mark for the betterment of us all! 🏳️‍⚧️🏳️‍🌈 #QueerinSTEM prideinstem.org/lgbtstemday/
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Dr. Torrance Hanley @torrancehanley.bsky.social · 17/11/2024
Reposting this list of #EarlyCareerResearchers in #Marine Biology/Ecology/Evolution, which now contains 150 ECRs from around the world. While no starter pack is perfect, the goal was to include people w/ diverse interests, expertise, & perspectives. Let's amplify the voices of the next generation! 🧪
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Brett Baker @archaeal.bsky.social · 31/10/2024
New preprint, Methane production from hydrocarbon by consortium dominated by ANME archaea. www.biorxiv.org/content/10.1...
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Kathryn (Katy) Appler @katyappler.bsky.social · 27/11/2023
Happy to share my 1st first first-author paper in preprint with co-first @luisvalentin.bsky.social! Here, we describe three complete Asgard Archaea genomes from wetland soil in a collaboration between the @archaeal.bsky.social lab and the Banfield Lab. #ArchaeaSky 1/
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