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Anastasia Kurzyukova

@anastasiaku.bsky.social
276 followers 804 following 6 posts

PhD student in the @grothlab.bsky.social at the Danish Cancer Institute | NNF Copenhagen Bioscience PhD Programme | Cellular plasticity. Epigenetic inheritance. Chromatin replication.

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Reposted by Anastasia Kurzyukova
Max Planck Institute for Molecular Genetics @molgen.mpg.de · 29/10/2025
📢 Don't miss @groth-anja.bsky.social from the Danish Cancer Institute, who will present her research at the #Embryo2026 🧬 "How cells copy their epigenome" Register until Oct 31! 👇 www.molgen.mpg.de/embryo2026 Supported by the Weizmann Institute of Science
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Reposted by Anastasia Kurzyukova
Susi Bantele @sbantele.bsky.social · 06/11/2025
𝗖𝗮𝗻 𝗰𝗲𝗹𝗹𝘀 𝗲𝘃𝗲𝗿 𝘁𝗿𝘂𝗹𝘆 𝗿𝗲𝗰𝗼𝘃𝗲𝗿 𝗳𝗿𝗼𝗺 𝗗𝗡𝗔 𝗱𝗮𝗺𝗮𝗴𝗲?Excited to share our new study “Repair of DNA double-strand breaks leaves heritable impairment to genome function”, revealing DNA repair’s hidden cost, out now @science.org tinyurl.com/5n6zw3ye. Led by @sbantele.bsky.social and Jiri Lukas.🧵👇1/n
tinyurl.com
Repair of DNA double-strand breaks leaves heritable impairment to genome function
Upon DNA breakage, a genomic locus undergoes alterations in three-dimensional chromatin architecture to facilitate signaling and repair. Although cells possess mechanisms to repair damaged DNA, it is ...
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Reposted by Anastasia Kurzyukova
Nature Reviews Genetics @natrevgenet.nature.com · 18/08/2025
Our featured article: Epigenome dynamics in early mammalian embryogenesis by Adam Burton & Maria-Elena Torres-Padilla go.nature.com/45UA8Ob
go.nature.com
Epigenome dynamics in early mammalian embryogenesis - Nature Reviews Genetics
Upon fertilization and during early mammalian development, major changes in cellular plasticity occur. This is accompanied by large-scale epigenome remodelling, as has been recently highlighted by the...
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Anastasia Kurzyukova @anastasiaku.bsky.social · 18/08/2025
nature.com
When cellular reprogramming meets AI: towards de novo cell design - Nature Reviews Genetics
In this Journal Club, Jian Shu recalls a 2006 publication by Takahashi and Yamanaka as well as a 2021 paper introducing AlphaFold to discuss the fascinating potential of cellular reprogramming in the ...
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Anastasia Kurzyukova @anastasiaku.bsky.social · 07/08/2025
Curious www.nature.com/articles/d41...
nature.com
The brain fires up immune cells when sick people are nearby
When people viewed virtual avatars with coughs or rashes, their brains triggered an immune response.
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Reposted by Anastasia Kurzyukova
Abby Buchwalter @abbybuch.bsky.social · 22/07/2025
Another paper bluetorial! Today: how does the spatial location of genes influence their function? (1/n) www.nature.com/articles/s41...
nature.com
The nuclear periphery confers repression on H3K9me2-marked genes and transposons to shape cell fate - Nature Cell Biology
Marin et al. report the role of lamin proteins and the lamin B receptor (LBR) in chromatin positioning at the nuclear periphery. Knockout of all lamins and LBR in mouse embryonic stem cells leads to h...
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Reposted by Anastasia Kurzyukova
Epigenome Technologies @epigenometech.bsky.social · 18/06/2025
Epigenetics Update - Bivalent chromatin instructs lineage specification during hematopoiesis bit.ly/3G4GmRv Hanno Hock and Konrad Hochedlinger (Harvard) reporting in Cell #Epigenetics #BivalentDomains #Hematopoiesis --- Gain deeper insights into gene regulation at epigenometech.com
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Reposted by Anastasia Kurzyukova
Josh Brickman @josh-brickman.bsky.social · 25/04/2025
How does metabolism act through generic chromatin modifiers promote specific cellular states? Simultaneous modification of transcription factors and chromatin, enhancing epigenetic signal to noise ratios. www.embopress.org/doi/full/10....
embopress.org
Altering metabolism programs cell identity via NAD+-dependent deacetylation | The EMBO Journal
imageimageHow alterations in cell metabolism translate into specific developmental gene programs remains a major question. This study shows that forcing OXPHOS metabolism reprograms mouse embryonic stem cells (ESCs) to a more inner cell mass (ICM)-...
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Anastasia Kurzyukova @anastasiaku.bsky.social · 22/04/2025
I believe these rules can apply to anyone, not just those doing a PhD.
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Reposted by Anastasia Kurzyukova
Anja Groth @groth-anja.bsky.social · 23/03/2025
Arrived! The Groth lab moved to the Danish Cancer Institute. Beautiful new labs shared with @nilskrietenstein.bsky.social Thanks to everyone at DCI for a warm welcome. We are excited to be here and get experiments going 🧬
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Reposted by Anastasia Kurzyukova
Serge McGraw @sergemcgraw.bsky.social · 27/02/2025
Happy to share the lab's latest publication from @eli-elder.bsky.social and team in @narjournal.bsky.social ! What happens when #DNAmethylation maintenance is transiently interrupted in mouse embryonic stem cells? Let's dive in (1/11). doi.org/10.1093/nar/...
doi.org
Rescuing DNMT1 fails to fully reverse the molecular and functional repercussions of its loss in mouse embryonic stem cells
Abstract. Epigenetic mechanisms are crucial for developmental programming and can be disrupted by environmental stressors, increasing susceptibility to dis
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Reposted by Anastasia Kurzyukova
Active Motif Official @activemotifusa.bsky.social · 06/03/2025
Don't miss this work by Donia Hidaoui at INSERM taking an #epigenetics approach to target heterochromatin in malignant stem cells to further options for CMML. They use a LINE-1 assay to analyze 5-hmC globally. View the research - bit.ly/41Klqr2 See how the assay works - bit.ly/3QK5dfh
bit.ly
Targeting heterochromatin eliminates chronic myelomonocytic leukemia malignant stem cells through reactivation of retroelements and immune pathways - Communications Biology
Chromatin and transcriptome studies in myelomonocytic leukemia stem cells revealed repression of retroelements and immune genes. Restoring these pathways by co-inhibiting DNA methylation and H3K9me2 e...
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Reposted by Anastasia Kurzyukova
The Groth lab @grothlab.bsky.social · 06/03/2025
𝐍𝐞𝐰 𝐦𝐞𝐜𝐡𝐚𝐧𝐢𝐬𝐭𝐢𝐜 𝐢𝐧𝐬𝐢𝐠𝐡𝐭𝐬 𝐢𝐧𝐭𝐨 𝐭𝐡𝐞 𝐫𝐞𝐠𝐮𝐥𝐚𝐭𝐢𝐨𝐧 𝐨𝐟 𝐡𝐢𝐬𝐭𝐨𝐧𝐞 𝐬𝐮𝐩𝐩𝐥𝐲! Excited to share our latest collaboration led by tkjeong.bsky.social and ciaranfrater.bsky.social! Structural determination of the histone chaperone ASF1 and its regulator CODANIN-1 uncovers how CODANIN-1 counters ASF1 activity. 🧵👇
rdcu.be
CODANIN-1 sequesters ASF1 by using a histone H3 mimic helix to regulate the histone supply
Nature Communications - CODANIN-1 negatively regulates the function of ASF1, the key chaperone for histone H3-H4 supply. Here the authors present the cryo-EM structure of the CODANIN-1_ASF1A...
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Reposted by Anastasia Kurzyukova
Magdalena Skipper @magdalenaskipper.bsky.social · 06/03/2025
In an unprecedented move, the US National Institutes of Health (NIH) has begun mass terminations of research grants that fund active scientific projects because they no longer meet “agency priorities”…. 🧪 #AcademicSky www.nature.com/articles/d41...
nature.com
Exclusive: NIH to terminate hundreds of active research grants
Studies that touch on LGBT+ health, gender identity and DEI in the biomedical workforce could be terminated, according to documents obtained by Nature.
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Reposted by Anastasia Kurzyukova
Science News @scinews.bsky.social · 06/03/2025
The ozone hole is healing, thanks to global reduction of CFCs New results show with high statistical confidence that ozone recovery is going strong. www.nature.com/articles/s41...
nature.com
Fingerprinting the recovery of Antarctic ozone - Nature
Pattern-based detection and attribution methods that make use of trend pattern information as a function of month and height provide evidence that reduction of ozone-depleting substances has resulted ...
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Reposted by Anastasia Kurzyukova
Aligning Science Across Parkinson's @asapresearch.parkinsonsroadmap.org · 26/02/2025
In this paper, CRN Team @jacksonlab.bsky.social found that LINE-1 transposable elements contribute to the complexity of the transcriptome in human pluripotent stem cells by acting as alternative promoters for approximately 100 genes. Check out the full #preprint: shorturl.at/TJ9BK
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Anja Groth @groth-anja.bsky.social · 26/02/2025
SAVE THE DATE! The next EMBO | EMBL Symposium on 'DNA replication and genome maintenance: from basic biology to disease' will be held October 20-23, 2026.   Organized by Helle Ulrich (IMB), Johannes Walter (Harvard) and Anja Groth (Danish Cancer Institute). www.embl.org/about/info/c...
embl.org
DNA replication and genome maintenance: from basic biology to disease
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Reposted by Anastasia Kurzyukova
Magdalena Skipper @magdalenaskipper.bsky.social · 25/02/2025
Migraine is more than a headache — a broad phenomenon that originates in the brain & can manifest in many debilitating symptoms, including light sensitivities & aura, brain fog & fatigue. A radical rethink of the condition offers hope to one billion people 🧪 #MedSky www.nature.com/articles/d41...
nature.com
Migraine is more than a headache — a radical rethink offers hope to one billion people
Drugs that can prevent or relieve migraine attacks are only effective for some people. Research is starting to untangle the reasons why.
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Reposted by Anastasia Kurzyukova
Nature @nature.com · 24/02/2025
The Trump administration's efforts to slash research funding have US graduate students, postdocs and other early-career scientists fearing for their careers. Some might leave the country -- or abandon research altogether. go.nature.com/43ao2zq
go.nature.com
Postdocs and PhD students hit hard by Trump’s crackdown on science
As US federal grants remain frozen and budget cuts loom, anxiety and fear grip early-career researchers.
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Reposted by Anastasia Kurzyukova
The Groth lab @grothlab.bsky.social · 19/02/2025
𝐇𝐨𝐰 𝐝𝐨 𝐜𝐞𝐥𝐥𝐬 𝐫𝐞𝐦𝐞𝐦𝐛𝐞𝐫 𝐰𝐡𝐨 𝐭𝐡𝐞𝐲 𝐚𝐫𝐞 𝐚𝐟𝐭𝐞𝐫 𝐃𝐍𝐀 𝐫𝐞𝐩𝐥𝐢𝐜𝐚𝐭𝐢𝐨𝐧? Our new study “Disabling leading and lagging strand histone transmission results in parental histones loss and reduced cell plasticity and viability” is out in 𝘚𝘤𝘪𝘦𝘯𝘤𝘦 𝘈𝘥𝘷𝘢𝘯𝘤𝘦𝘴. Led by @lleonie.bsky.social @biranalva.bsky.social 🧵 More below👇
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Disabling leading and lagging strand histone transmission results in parental histones loss and reduced cell plasticity and viability
Losing parental histones during DNA replication fork passage challenges differentiation competence and cell viability.
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Anastasia Kurzyukova @anastasiaku.bsky.social · 20/02/2025
Amazing work, congratulations!😊
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The Groth lab @grothlab.bsky.social · 12/02/2025
🚨𝐌𝐚𝐣𝐨𝐫 𝐉𝐨𝐛 𝐀𝐥𝐞𝐫𝐭!🚨The Groth @groth-anja.bsky.social, Mailand, Nilsson @nilssonlab.bsky.social & Krietenstein @nilskrietenstein.bsky.social labs are hiring 𝟔 𝐏𝐡𝐃&𝐩𝐨𝐬𝐭𝐝𝐨𝐜𝐬 to join the new Center for Epigenetic Cell Memory (EpiC) in Copenhagen, Denmark. Apply here: tinyurl.com/yvd93na2 & please share!
tinyurl.com
6 Postdoctoral and PhD positions in Center for Epigenetic Cell Memory (EpiC)
The Center for Epigenetic Cell Memory (EpiC) is a new Center of Excellence that will be established based on funding by the Danish National Research Foundation.
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Reposted by Anastasia Kurzyukova
Evan Healy @evhealy.bsky.social · 14/01/2025
🧵 1/ We’re excited to share that our new paper with @adrianbracken.bsky.social lab is out 🎉 In this study (which began over 10 years ago!), we explore the biology of PRC2 and PRC1 in non-dividing cells. We also explore the effects of PRC2 inhibitor drugs on these cells. Here’s what we found👇
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Turner Lab @lab-turner.bsky.social · 24/01/2025
We thrilled to see our latest study led by @jeremie-subrini.bsky.social now out in @science.org 🔬 What are the specific functions of each Y-chromosome gene in fertility ? We generated and studied 13 Y-gene KO mouse models to find out! 🧬 www.science.org/doi/full/10....
science.org
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Anastasia Kurzyukova @anastasiaku.bsky.social · 24/01/2025
Learned the Business Model You framework in the Scientific Project Planning and Management course for PhD students led by Valeska Russo
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Rita Strack @ritastrack.bsky.social · 23/01/2025
Every once in a while we publish a paper that moves a whole field forward. I think that's the case for this one from the Bugaj lab, where they describe proteins for THERMOGENETIC control of cellular behavior. www.nature.com/articles/s41...
nature.com
A temperature-inducible protein module for control of mammalian cell fate - Nature Methods
The Melt (Membrane localization using temperature) protein translocates to the plasma membrane upon temperature shift. Melt variants with a range of switching temperatures enable straightforward therm...
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Reposted by Anastasia Kurzyukova
ASAP Team Jakobsson @jakobssonasap.bsky.social · 18/01/2025
🚨 New pre-print from Team Jakobsson! LINE-1 retrotransposons regulate the exit of human pluripotency and early brain development. This work was led by @anitaada.bsky.social, @raquelgarza.bsky.social and @jakobssonlab.bsky.social from the Jakobsson Lab. www.biorxiv.org/content/10.1...
biorxiv.org
LINE-1 retrotransposons regulate the exit of human pluripotency and early brain development
Long interspersed nuclear element 1 (L1) retrotransposons represent a vast source of divergent genetic information. However, mechanistic analysis of whether and how L1s contribute to human development...
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Reposted by Anastasia Kurzyukova
Genetics Society UK @gensocuk.bsky.social · 17/01/2025
Join us in Belfast for our #epigenetics meeting and hear from fantastic speakers. Submit an abstract until 26 Jan and register until 23 Feb! Don't miss this chance to share your research & network with experts in the field. genetics.org.uk/events/epige...
genetics.org.uk
Epigenetics-2025, from mechanisms to disease | Genetics Society
Meeting background This international conference will bring together leading experts to foster dynamic discussions on the latest breakthroughs in epigenetics. It will cover mechanisms of epigenetic re...
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Reposted by Anastasia Kurzyukova
AlphaFold Unofficial @alphafold.bsky.social · 17/01/2025
OpenAI has created an AI model for longevity science. GPT-4b micro is for protein engineering, re-engineering Yamanaka factors to for stem cell production efficiency by over 50 times. Their first model on biological data and protein design. (OpenAI) www.technologyreview.com/2025/01/17/1...
technologyreview.com
OpenAI has created an AI model for longevity science
The company is making a foray into scientific discovery with an AI built to help manufacture stem cells.
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Reposted by Anastasia Kurzyukova
Hiten Madhani @hitenmadhani.bsky.social · 07/01/2025
Happy New Year, blue-sci-peeps! My piece in Annual Review of Biophysics on chromatin replication is now available online. doi.org/10.1146/annu... If you have paywall issues, try this link: madhanilab.ucsf.edu/s/annurev-bi...
doi.org
Mechanisms of Inheritance of Chromatin States: From Yeast to Human | Annual Reviews
In this article I review mechanisms that underpin epigenetic inheritance of CpG methylation and histone H3 lysine 9 methylation (H3K9me) in chromatin in fungi and mammals. CpG methylation can be faith...
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Reposted by Anastasia Kurzyukova
Centre de Regulació Genòmica (CRG) @crg.eu · 13/01/2025
"The team's ultimate goal is to build a database that's useful for predicting the effect of any mutation on protein stability, Beltran said. Such a tool could theoretically enable scientists to develop better drugs for genetic diseases that target the faults in proteins that drive the conditions."
livescience.com
1st-of-its-kind database reveals how DNA mutations 'destabilize' proteins, triggering genetic disease
A new mega-database of half a million mutations may flag new ways of treating genetic disease, scientists say.
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Reposted by Anastasia Kurzyukova
Vijay Ramani @vram142.bsky.social · 15/11/2024
The latest from our group, led by Megan Ostrowski and @martyyang.bsky.social, is now published in final form (www.cell.com/cell/fulltex...! Many thanks to our excellent peer reviewers for suggesting several experiments (including CAF-1 perturbation) to really improve the study =) #epigenetics
cell.com
The single-molecule accessibility landscape of newly replicated mammalian chromatin
By developing a long-read sequencing method to simultaneously map replication status and protein-DNA contacts in cells, Ostrowski, Yang, et al. show that newly replicated chromatin is enriched for unw...
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Anastasia Kurzyukova @anastasiaku.bsky.social · 08/01/2025
The final takeaway is rather curious!
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