Sign in

Yukiyo Sato

@yukiyosato.bsky.social
184 followers 177 following 2 posts

WTT assistant prof. at IPSR, Okayama Univ., studying plant-microbe interactions, viruses, and fungal genomics

PostsRepliesMedia
Reposted by Yukiyo Sato
bioRxiv Plant Bio @biorxiv-plants.bsky.social · 01/10/2026
Rice blast fungus hijacks a rice RALF peptide to initiate infection www.biorxiv.org/content/10.64898/20…
02213
Reposted by Yukiyo Sato
Fantin Mesny @mesny.bsky.social · 01/10/2026
5 years ago, @hacquardst.bsky.social and I became very interested in 𝑃𝑙𝑒𝑐𝑡𝑜𝑠𝑝ℎ𝑎𝑒𝑟𝑒𝑙𝑙𝑎 𝑐𝑢𝑐𝑢𝑚𝑒𝑟𝑖𝑛𝑎, an emerging fungal pathogen that colonizes the roots of many plants 🌱 🍅 🌾 🆕📝 Final result of a huge team effort to uncover the bases of its multi-host compatibility👇 www.nature.com/articles/s41...
nature.com
Carbohydrate-active enzymes from a core root mycobiota member enable infection of multiple plant hosts - Nature Microbiology
Host-induced fungal CAZymes act as disease determinants and drive multihost compatibility.
16730
Reposted by Yukiyo Sato
Ciaran Kelly @ciarankelly.bsky.social · 08/09/2026
Our new preprint is out! 🍄 Decoupled evolution of antimicrobial repertoires in lichen-forming fungi We compared many lichen-forming fungal genomes to ask how different photobiont associations relate to their antimicrobial repertoires.
13719
Reposted by Yukiyo Sato
Anton Kraege @antonkraege.bsky.social · 29/07/2026
Super proud to see this preprint out! We found that a conserved fungal protein family has ancient antimicrobial activity 🍄‍🟫 I loved working on this evolutionary side of plant pathogenicity together with my coauthors. Preprint: www.biorxiv.org/content/10.6... 👇 or see the 🧵 here
0209
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 28/07/2026
📣 New preprint! 🧵 Fantastic work led by @antonkraege.bsky.social Fact: Cerato-platanins are everywhere in fungi. Found across the fungal kingdom, implicated in everything from development to virulence to immune activation. But what do they *actually* do? We finally found the answer 👇
25343
Reposted by Yukiyo Sato
Rebecca Berrens @rberrens.bsky.social · 10/07/2026
Hi #TEsky, please remember that we have an amazing community in the TransposonsWorldWide slack channel (join.slack.com/t/transposon...), which I encourage you to join. Another great resource is tehub.org. Please share !
join.slack.com
Join TransposonsWorldwide on Slack
Slack is a new way to communicate with your team. It’s faster, better organized, and more secure than email.
13622
Reposted by Yukiyo Sato
Björn Usadel @usadellab.bsky.social · 25/06/2026
1/8 What if the genomic features we associate with fungal pathogens were also used by mutualists? We assembled 41 scale lichen genomes across 11 Peltigera species with 30 chromosome scale and 5 T2T revealing an unexpected genomic toolkit behind lichen symbiosis. doi.org/10.64898/202... #lichen
doi.org
A chromosome-scale super-pangenome of the lichen genus Peltigera reveals genome architecture and expanded interaction repertoires shared across pathogenic and mutualistic fungi
Fungi engage in associations with other organisms across a continuum from pathogenic to mutualistic lifestyles. Hence, they require a compendium of molecular capacities, including partner recognition,...
14630
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 25/06/2026
Thoroughly enjoyed this collaboration with @usadellab.bsky.social & @faltegoer.bsky.social groups in the @mibinet.bsky.social framework to characterize Peltigera lichen symbioses with major contributions from @ciarankelly.bsky.social & @yukiyosato.bsky.social
01611
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 19/06/2026
📣 We are hiring! In the collaborative research center 'Plant Ecological Genetics' @teamthomma.bsky.social searches a PhD candidate to study the role of plant-associated microbiota in plant density responses and inter-plant competition. See project A07. Deadline July 10!
045
Reposted by Yukiyo Sato
Andrea Doddi @adoddi.bsky.social · 22/06/2026
Thrilled to see this work finally out in Nature Communications! @natcomms.nature.com. Thanks again to all the people involved, to @lfaino.bsky.social and @teamthomma.bsky.social .
0185
Reposted by Yukiyo Sato
Isabel saur @izzysaurlab.bsky.social · 04/06/2026
We have an open PhD position in our Mol. Biochemistry of Plant-Microbe Interactions Lab Saurlab.com. Please see details below, share and consider applying. jobportal.uni-koeln.de/ausschreibun...
jobportal.uni-koeln.de
03855
Reposted by Yukiyo Sato
Johana Misas Villamil @jomivi.bsky.social · 03/06/2026
📢 new preprint! How do commensal bacteria establish themselves on plant roots despite plant immunity? We identify Cpi1, a conserved membrane-anchored protease inhibitor in Pseudomonas that promotes early root colonization and modulates microbial community assembly. www.biorxiv.org/cgi/content/...
44824
Reposted by Yukiyo Sato
Muriel Viaud @muriel-viaud.bsky.social · 03/06/2026
Happy to share our work! 🍄🍇 Botrytis cinerea grapevine-specialized strains harbor a specific repertoire of transposons. While retrotransposon-derived small RNAs do not appear to play a significant role in virulence on grapevine, a new giant transposon—a #Starship— confers arsenic resistance.
22715
Reposted by Yukiyo Sato
Marion Clavel @thevirusmc.bsky.social · 29/05/2026
Our work is out now! (www.science.org/doi/10.1126/...). We discover a selective autophagy pathway that protects plants from the mess caused by RNA viruses. Intrigued? Follow the spaghetti trail for a summary of our findings🧵-->
science.org
Selective autophagy fine-tunes plant immunity to promote cell survival during viral infection
RNA viruses co-opt host endomembranes to form replication complexes, often triggering cellular stress and immune responses. Here, we show that Arabidopsis thaliana activates selective autophagy to res...
98140
Reposted by Yukiyo Sato
Gabriella Petti @gabriellapetti.bsky.social · 28/05/2026
Excited to share our latest study with @nicksnelders.bsky.social and @teamthomma.bsky.social! We uncover the mode of action of the V. dahliae antimicrobial effector Ave1 and show that it binds LTA and disrupts bacterial membranes 🦠 www.biorxiv.org/cgi/content/...
biorxiv.org
01713
Reposted by Yukiyo Sato
Lisa Mahdi @lisamahdi.bsky.social · 24/05/2026
So happy to see this Story out!! Thanks to everybody that contributed.
093
Reposted by Yukiyo Sato
Team_Zuccaro @algazuccaro.bsky.social · 24/05/2026
How do beneficial fungi remodel host cell walls without triggering immunity? We identify SiROCX as a basidiomycete-specific regulator activating CAZyme targets, including GH11/GH10/GH43/CE4 and AA9 enzymes, for xylan/cellulose remodeling during symbiosis. www.biorxiv.org/content/10.6...
0209
Reposted by Yukiyo Sato
Zoe Prockl @zoeprockl.bsky.social · 21/05/2026
Very happy to share results from the first year of my PhD: we found that the model alga Chlamydomonas reinhardtii engages in a mutualistic interaction with Verticillium fungi. With @hroevenich.bsky.social and Urs. Graphical abstract: 🟢 + 🍄= 💚 www.biorxiv.org/content/10.6...
biorxiv.org
22613
Reposted by Yukiyo Sato
Ernesto Llamas @eellamas.bsky.social · 20/05/2026
1/ Happy to share our latest work, now on bioRxiv! 🌱🍄 We explore how Serendipita indica effectors target root plastids and modulate plastidial metabolism through prion-like domains. bioRxiv: www.biorxiv.org/content/10.6... #plastids #plantmicrobe #chloroplasts #plants
biorxiv.org
2249
Reposted by Yukiyo Sato
Riccardo Baroncelli @riccardobaroncelli.bsky.social · 15/05/2026
Thrilled to see this finally out!! Our new work suggests #Starships helped #Colletotrichum acquire the genes needed to infect lupin. A glimpse into how fungal pathogens emerge through horizontal transfer and genome reshaping. biorxiv.org/content/10.6... #Fungi #Genomics #Pathogenicity #evolution
25330
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 13/05/2026
📣 New preprint on @biorxivpreprint.bsky.social: Bacteria rewire fungal antimicrobial gene expression in microbial arms races www.biorxiv.org/cgi/content/... This work, led by outstanding @jinyi-zhu.bsky.social, shows that bacteria suppress fungal antimicrobial protein expression to evade antagonism
biorxiv.org
24626
Reposted by Yukiyo Sato
Jinyi Zhu @jinyi-zhu.bsky.social · 10/05/2026
Fungi deploy antimicrobial proteins (AMPs) to compete with microbes, including bacteria. But can bacteria fight back? We @teamthomma.bsky.social found that some AMP-sensitive bacteria can repress AMP deployment, suggesting an unrecognized bacterial–fungal arms race. www.biorxiv.org/content/10.6...
biorxiv.org
03116
Reposted by Yukiyo Sato
Fantin Mesny @mesny.bsky.social · 29/04/2026
🎉 📰 Very happy to share the journal publication of our manuscript "Plant-associated fungi co-opt ancient antimicrobials for host manipulation"! #ScienceAdvancesResearch @science.org @teamthomma.bsky.social www.science.org/doi/10.1126/...
science.org
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Fungal effectors may have evolved from ancient antimicrobials, shaping plant microbiota and immunity during infection.
69649
Reposted by Yukiyo Sato
Cecile Lorrain @ccilelorrain.bsky.social · 15/04/2026
Thrilled to share our paper now out in Nature Plants 🎉 We developed a genome-host association (GHA) approach to study pathogen adaptation directly from field metadata by using the originating host cultivar as phenotype. www.nature.com/articles/s41...
nature.com
Genome–host association mapping reveals wheat pathogen genes involved in host specialization - Nature Plants
This study introduces genome–host association (GHA), leveraging natural epidemics to map the genetic landscape of host adaptation in the pathogen Zymoseptoria tritici. Applied to 832 wheat fungal stra...
35231
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 18/03/2026
🥳 Happy that our manuscript, first published on @biorxivpreprint.bsky.social has been accepted for publication in "Microbiome" and will be part of a collection on "Harnessing plant microbiomes to improve performance and mechanistic understanding" link.springer.com/article/10.1...
link.springer.com
Differential contributions of an antimicrobial effector from Verticillium dahliae to virulence and tomato microbiota assembly across natural soils - Microbiome
Background Throughout their life cycle, plants associate with diverse and complex microbial communities collectively known as their microbiota. These microbiota contribute to plant performance and hea...
02113
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 15/03/2026
🎉 Last week @antonkraege.bsky.social brilliantly defended his PhD thesis @unicologne.bsky.social entitled "Functional and Evolutionary Characterisation of Antimicrobial Effectors Secreted by Verticillium dahliae to Shape Host Microbiota" #proudPI #PhDone
03610
Reposted by Yukiyo Sato
GeminiTeamLab @geminiteamlab.bsky.social · 20/02/2026
RNA splicing generates a functionally specialized Rep protein isoform in geminiviruses — enabling timely control of the viral cycle. Strikingly, similar strategies might have evolved in DNA viruses infecting different kingdoms: www.biorxiv.org/content/10.6... Spearheaded by @delphinem-p.bsky.social!
05435
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 18/02/2026
📣 12 open postdoc positions in @ceplas.bsky.social !! www.ceplas.eu/en/training-... We @teamthomma.bsky.social look for a postdoc on The Secret Lives of Soil-Borne Fungal Pathogens: Spatiotemporal Dynamics of Intermicrobial Interactions in Soils (see project 4)
ceplas.eu
CEPLAS: Call 2026
01920
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 14/02/2026
📣 Our latest story just dropped on bioRxiv:: A structurally unique effector shared between Verticillium dahliae and Fusarium oxysporum is involved in cotton defoliation and virulence on other hosts www.biorxiv.org/content/10.6... 🧵
biorxiv.org
34630
Reposted by Yukiyo Sato
Isabelle Fudal @ifudal.bsky.social · 31/01/2026
A permanent position as a research scientist is opened in our team! We look for a plant physiologist with expertise in plant / microorganism interactions to identify plant susceptibility factors to fungal disease. Please forward!
02335
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 27/01/2026
🎉 Yesterday we enjoyed the glorious defence of @gabriellapetti.bsky.social of her @unicologne.bsky.social PhD thesis on "Homologous antimicrobial proteins in plants and fungi: conserved mechanisms shaping the plant microbiota" #proudPI #PhDone ..mind the crown modeled after the Ave1 NMR structure!😍
2369
Reposted by Yukiyo Sato
Asiya Gusa @asiya-gusa.bsky.social · 17/01/2026
Sharing our lab’s first publication! Probing clinical isolates of Cryptococcus, a disease-causing fungus of the lungs and brain, we found multiple heat-mobile elements that ‘jump’ in the genome at body temperature (!) with the ability to drive adaptive changes. journals.plos.org/plosgenetics...
13115
Reposted by Yukiyo Sato
Isabel saur @izzysaurlab.bsky.social · 10/01/2026
Wei Shi @wshisky.bsky.social & Merle‘s work is online. Wei really pushed this work from scratch and Merle linked it to MLA diversification…3rd (co-)first author paper in her PhD. Very proud PI! And only possible through collaboration with G. Döhlemann, @grandpahiro.bsky.social &, Matt Platre. (1/x)
doi.org
Targeting of the barley cell-surface receptor SRF3 by the Blumeria hordei effector AVRA13 overlaps with AVRA13 recognition by MLA and the induction of NLR-mediated cell death.
Pathogens secrete effector proteins to promote virulence. Despite their recognition by barley Mla resistance genes, the structurally-related Blumeria hordei ( Bh ) AVRA effectors are maintained in the...
44936
Reposted by Yukiyo Sato
Slavica Janevska @slavi-jan.bsky.social · 07/01/2026
Beyond excited to see this work finally out in @narjournal.bsky.social! We show that epigenetic modifiers on fungal accessory chromosomes can contribute to the overall epigenetic profile. Many thanks to @gomezlucia93.bsky.social and our other amazing collaborators 👏🏻 academic.oup.com/nar/article/...
academic.oup.com
Facultative heterochromatin mediated by core and accessory chromosome-encoded H3K27-specific methyltransferases controls virulence in a fungal phytopathogen
Abstract. In many fungal phytopathogens, infection is regulated by accessory genomic regions enriched in facultative heterochromatin, but the precise role
13419
Reposted by Yukiyo Sato
Marion Clavel @thevirusmc.bsky.social · 16/12/2025
We are looking far and wide for this position! So if you are motivated, interested in academia, and want to explore the world of plant-virus interaction, we are ALSO happy to host you for a PhD! More detail below🔽☘️🦠
01721
Reposted by Yukiyo Sato
Marion Clavel @thevirusmc.bsky.social · 16/12/2025
The Clavel Group is recruiting a new postdoc for two possible projects dealing with plant-virus interactions and selective autophagy! More (wordy) details below ⬇️🌱🦠
03338
Reposted by Yukiyo Sato
Tatsuya Nobori @tatsuyanobori.bsky.social · 15/12/2025
🚨We’re hiring! Please help spread the word! Our lab at @TheSainsburyLab is recruiting a pre-doctoral intern to work on plant immunity research. Ideal for those who are planning to pursue a PhD and seeking research experience. tatsuyanobori.com
24653
Reposted by Yukiyo Sato
Team Thomma @teamthomma.bsky.social · 12/12/2025
📣 Major milestone achieved! First @teamthomma.bsky.social @unicologne.bsky.social PhD student graduated 🎉! Congratulations to @wolki95.bsky.social for a stellar defence of a thesis on antimicrobial effectors of Verticillium dahliae that drive niche adaptation #proudPI #PhDone
2449
Reposted by Yukiyo Sato
Josje Romeijn @jromeijn.bsky.social · 09/12/2025
Now officially published in Current Biology 🥳🥳 @mfseidl.bsky.social @binfutrecht.bsky.social www.cell.com/current-biol...
cell.com
Extensive horizontal transfer of transposable elements shapes fungal mobilomes
Romeijn et al. reveal that horizontal transposon transfer is widespread in fungi, contributing up to 70% of transposon content in some taxa. The authors uncover thousands of events across diverse line...
36337
Reposted by Yukiyo Sato
Marco Incarbone @incavirus.bsky.social · 02/12/2025
Preprint alert! It is my great pleasure to announce the first manuscript from the lab, a story that started @gmivienna.bsky.social and was mainly accomplished by the intrepid @gesahoffmann.bsky.social at @mpi-mp-potsdam.bsky.social. A brief thread with our findings www.biorxiv.org/content/10.1...
biorxiv.org
AGO5 restricts virus vertical transmission in plant gametophytes
The propagation of a viral infection from a host parent to its progeny is known as vertical transmission, or seed transmission in plants. It allows viral infections to rapidly spread locally via polle...
27937
Reposted by Yukiyo Sato
Cecile Lorrain @ccilelorrain.bsky.social · 28/11/2025
Our paper on Zymoseptoria tritici 3D genome organization is officially out! @iglavincheska.bsky.social link.springer.com/article/10.1...
link.springer.com
Three-dimensional genome architecture connects chromatin structure and function in a major wheat pathogen - BMC Biology
Background Genome spatial organization plays a fundamental role in biological function across all domains of life. While the principles of nuclear architecture have been well-characterized in animals ...
13524
Reposted by Yukiyo Sato
Gulnara Tagirdzhanova @metalichen.bsky.social · 28/11/2025
New preprint: 🚀🧬 Starship in the genome of the lichen fungus Xanthoria. Discovery of giant transposons Starships challenged what we thought we knew about fungal genomes. But what about Starships in #lichen fungi? Let us present Tangerine! 🖥️ 🧪 🦠 🧫 #SymbioSky doi.org/10.1101/2025...
15621
Reposted by Yukiyo Sato
Nick Dunken @nickdunken.bsky.social · 27/11/2025
My former colleague Patricia Zecua, me and the Zuccaro group published a new story about how autophagy restricts cell death and regulates root colonization by beneficial fungi: academic.oup.com/plphys/advan...
academic.oup.com
Autophagy restricts symbiosis-associated cell death and regulates colonization by Serendipita indica in Arabidopsis
Autophagy acts as a pro-survival mechanism in plant roots during beneficial fungal colonization by restricting fungal proliferation and immunometabolic cel
02416
Reposted by Yukiyo Sato
Megan McDonald @mcdonaldmeganc.bsky.social · 18/11/2025
Our latest pre-print on TE-mediated tandem duplication of the ToxB effector is now online...still a puzzle for us but we think it is in a Helitron! Together with amazing collaborators, Reem Aboukhaddour and Ryan Gourlie #TE #fungi www.biorxiv.org/content/10.1...
biorxiv.org
The virulence gene ToxB is both amplified and disrupted by transposons in the wheat pathogen Pyrenophora tritici-repentis
### Competing Interest Statement The authors have declared no competing interest. Agriculture and Agri-Food Canada, https://ror.org/051dzs374 Alberta Grain Saskatchewan Wheat Development Commissio...
03414
Reposted by Yukiyo Sato
Toby Baril @tobybarilbio.bsky.social · 12/11/2025
TEs aren’t just genomic parasites, they’re also engines of genomic novelty. Our new study with ~2,000 Z. tritici genomes shows repeated TE mobilization waves during global expansion. With @danielcroll.bsky.social & @guidopuccetti.bsky.social 🧬 www.nature.com/articles/s41... #TEworldwide
nature.com
Historic transposon mobilisation waves create distinct pools of adaptive variants in a major crop pathogen - Nature Communications
In this study, the authors analysed a large genomic dataset to trace how jumping genes shaped the global spread of a major wheat pathogen and reveal bursts of activity over decades that drove adaptati...
07338
Reposted by Yukiyo Sato
Gulnara Tagirdzhanova @metalichen.bsky.social · 12/11/2025
Our paper on the #genome of the Trebouxia #photobiont from Xanthoria is now out in @newphyt.bsky.social! Check below for a near-chromosome level assembly, secretome analysis, evidence of ancient HGT, and transcriptomic comparison of the alga in symbiosis and in pure culture doi.org/10.1111/nph.70728
the top half shows two panels with microscopy images. Left is a light-microscopy image of a group of algal cells. The cells are round with different sizes. Two arrows point at sporangia: one looks as if someone stuffed 8 footballs in a thin elastic bag. The other is perfectly round and contains many small spores within. The right panel shows the same group of cells, but in fluorescent microscopy, where green color shows chloroplasts. In each cell the chloroplasts are globular with small lobes sticking out. The bottom half shows a photo of Xanthoria lichen - bright yellow and leafy growing on a tree branch
15920
Reposted by Yukiyo Sato
Zarah Sorger @zarizarah.bsky.social · 10/11/2025
🚨My very first (co-)first author paper got published in @pnas.org 🥳 We describe the tripartite interkingdom interaction between a yeast, the oomycete pathogen Albugo laibachii and a bacterium, mediated by a GH25 lysozyme 🦠 Thanks to everyone involved! www.pnas.org/doi/10.1073/...
pnas.org
GH25 lysozyme mediates tripartite interkingdom interactions and microbial competition on the plant leaf surface | PNAS
Microbial communities inhabiting plants have emerged as crucial factors in regulating plant health and defense against disease-causing pathogens. T...
1189
Reposted by Yukiyo Sato
Leo Castanedo @leocastanedo.bsky.social · 04/11/2025
🛑Exciting update from our work with @pierremarcdelaux.bsky.social team on the ericoid mycorrhizal symbiosis❗❗ 🔥New results support a conserved three-gene module and master regulator for nutrient-responsive intracellular accommodation of fungal symbionts🤯 Check the nice thread below👇🏼 #plantscience
0229
Reposted by Yukiyo Sato
Cristina Barragan @cbarragan.bsky.social · 03/11/2025
My new Emmy Noether Group is recruiting! 🔬 Two PhD positions in plant pathogen evolution 🧬 Start: April 2026 (flexible) 📍 Dept. of Phytopathology & Plant Protection @rstam.bsky.social @uni-kiel.de ⏰ Apply by 15 Dec 2025 🔗 More info: www.uni-kiel.de/personal/de/... Do get in touch or share 😊
uni-kiel.de
Aktuelle Ausschreibungen
Aktuelle Ausschreibungen
05460