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Wilko Punt

@wolki95.bsky.social
95 followers 191 following 0 posts

PhD Student at University of Cologne

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Reposted by Wilko Punt
Ciaran Kelly @ciarankelly.bsky.social · 08/09/2026
Our new preprint is out! 🍄 Decoupled evolution of antimicrobial repertoires in lichen-forming fungi We compared many lichen-forming fungal genomes to ask how different photobiont associations relate to their antimicrobial repertoires.
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Gabriella Petti @gabriellapetti.bsky.social · 28/05/2026
Excited to share our latest study with @nicksnelders.bsky.social and @teamthomma.bsky.social! We uncover the mode of action of the V. dahliae antimicrobial effector Ave1 and show that it binds LTA and disrupts bacterial membranes 🦠 www.biorxiv.org/cgi/content/...
biorxiv.org
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Zoe Prockl @zoeprockl.bsky.social · 21/05/2026
Very happy to share results from the first year of my PhD: we found that the model alga Chlamydomonas reinhardtii engages in a mutualistic interaction with Verticillium fungi. With @hroevenich.bsky.social and Urs. Graphical abstract: 🟢 + 🍄= 💚 www.biorxiv.org/content/10.6...
biorxiv.org
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Team Thomma @teamthomma.bsky.social · 13/05/2026
📣 New preprint on @biorxivpreprint.bsky.social: Bacteria rewire fungal antimicrobial gene expression in microbial arms races www.biorxiv.org/cgi/content/... This work, led by outstanding @jinyi-zhu.bsky.social, shows that bacteria suppress fungal antimicrobial protein expression to evade antagonism
biorxiv.org
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Jinyi Zhu @jinyi-zhu.bsky.social · 10/05/2026
Fungi deploy antimicrobial proteins (AMPs) to compete with microbes, including bacteria. But can bacteria fight back? We @teamthomma.bsky.social found that some AMP-sensitive bacteria can repress AMP deployment, suggesting an unrecognized bacterial–fungal arms race. www.biorxiv.org/content/10.6...
biorxiv.org
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Universität zu Köln @unicologne.bsky.social · 30/04/2026
🍂🌱 An international research team led by @teamthomma.bsky.social has discovered the surprising evolutionary origin of fungal effector proteins: molecules that pathogens use today to infect their hosts appear to have evolved from ancient antimicrobial proteins. More: ➡️ uni.koeln/UCMWQ #UniCologne
uni.koeln
Fungi utilize ancient antimicrobial proteins to attack hosts and their microbiomes
A team of plant researchers at the University of Cologne decodes a key infection strategy of fungal pathogens. Significant findings for disease control, plant protection and food security as well as f...
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Fantin Mesny @mesny.bsky.social · 29/04/2026
🎉 📰 Very happy to share the journal publication of our manuscript "Plant-associated fungi co-opt ancient antimicrobials for host manipulation"! #ScienceAdvancesResearch @science.org @teamthomma.bsky.social www.science.org/doi/10.1126/...
science.org
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Fungal effectors may have evolved from ancient antimicrobials, shaping plant microbiota and immunity during infection.
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Team Thomma @teamthomma.bsky.social · 18/03/2026
🥳 Happy that our manuscript, first published on @biorxivpreprint.bsky.social has been accepted for publication in "Microbiome" and will be part of a collection on "Harnessing plant microbiomes to improve performance and mechanistic understanding" link.springer.com/article/10.1...
link.springer.com
Differential contributions of an antimicrobial effector from Verticillium dahliae to virulence and tomato microbiota assembly across natural soils - Microbiome
Background Throughout their life cycle, plants associate with diverse and complex microbial communities collectively known as their microbiota. These microbiota contribute to plant performance and hea...
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Team Thomma @teamthomma.bsky.social · 15/03/2026
🎉 Last week @antonkraege.bsky.social brilliantly defended his PhD thesis @unicologne.bsky.social entitled "Functional and Evolutionary Characterisation of Antimicrobial Effectors Secreted by Verticillium dahliae to Shape Host Microbiota" #proudPI #PhDone
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Team Thomma @teamthomma.bsky.social · 18/02/2026
📣 12 open postdoc positions in @ceplas.bsky.social !! www.ceplas.eu/en/training-... We @teamthomma.bsky.social look for a postdoc on The Secret Lives of Soil-Borne Fungal Pathogens: Spatiotemporal Dynamics of Intermicrobial Interactions in Soils (see project 4)
ceplas.eu
CEPLAS: Call 2026
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Team Thomma @teamthomma.bsky.social · 14/02/2026
📣 Our latest story just dropped on bioRxiv:: A structurally unique effector shared between Verticillium dahliae and Fusarium oxysporum is involved in cotton defoliation and virulence on other hosts www.biorxiv.org/content/10.6... 🧵
biorxiv.org
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Anton Kraege @antonkraege.bsky.social · 30/10/2025
I’m very happy to see my fist article now officially published 🥳 great work by my partner in crime @wolki95.bsky.social and the rest of @teamthomma.bsky.social! Find it here: doi.org/10.1111/nph.... or have a look at the 🧵⬇️
doi.org
Undermining the cry for help: the phytopathogenic fungus Verticillium dahliae secretes an antimicrobial effector protein to undermine host recruitment of antagonistic Pseudomonas bacteria
During pathogen attack, plants recruit beneficial microbes in a ‘cry for help’ to mitigate disease development. Simultaneously, pathogens secrete effectors to promote host colonisation through vario...
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Team Thomma @teamthomma.bsky.social · 30/10/2025
📣 Now announcing the journal publication 📄 of our work in @newphyt.bsky.social on how Verticillium undermines the plant's 🌱 "cry for help": terrific work by @antonkraege.bsky.social & @wolki95.bsky.social doi.org/10.1111/nph....
doi.org
Undermining the cry for help: the phytopathogenic fungus Verticillium dahliae secretes an antimicrobial effector protein to undermine host recruitment of antagonistic Pseudomonas bacteria
During pathogen attack, plants recruit beneficial microbes in a ‘cry for help’ to mitigate disease development. Simultaneously, pathogens secrete effectors to promote host colonisation through vario...
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Reposted by Wilko Punt
Team Thomma @teamthomma.bsky.social · 14/10/2025
📣 New @biorxiv-microbiol.bsky.social preprint, another joint-venture of @wolki95.bsky.social & @antonkraege.bsky.social, co-directed by @nicksnelders.bsky.social. Here’s a 🧵
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Fantin Mesny @mesny.bsky.social · 15/08/2025
📣 NEW PREPRINT 📝 We identified evolutionary origins of many fungal effectors! We show that fungi secrete lots of antimicrobial proteins, and that some of them were repurposed by plant pathogens for host immune suppression. www.biorxiv.org/content/10.1... cc @teamthomma.bsky.social
biorxiv.org
Plant-associated fungi co-opt ancient antimicrobials for host manipulation
Evolutionary histories of effector proteins secreted by fungal pathogens to mediate plant colonization remain largely elusive. While most functionally characterized effectors modulate plant immunity, ...
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Team Thomma @teamthomma.bsky.social · 24/07/2025
📣 Happy to see the journal publication 📄 of our work on Starships 🚀 in Verticillium fungi: terrific work led by @yukiyosato.bsky.social rdcu.be/exBSp
rdcu.be
Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution
Nature Communications - Giant transposons, known as ‘Starships’, mediate horizontal gene transfer between fungal genomes. Here, Sato et al. show that Starships occupy genome regions...
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Fantin Mesny @mesny.bsky.social · 16/07/2025
My poster is up at #2025ISMPMI. Come by P-372 Thursday afternoon if you are interested in fungal evolution, effectors and microbial competitions! More research by @teamthomma.bsky.social at P-091, P-170, P-299, P-317, P-337 and P-388.
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Team Thomma @teamthomma.bsky.social · 16/06/2025
Last week, our latest @biorxivpreprint.bsky.social preprint was released, a joint-venture of @antonkraege.bsky.social & @wolki95.bsky.social and co-directed by @nicksnelders.bsky.social a 🧵
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bioRxiv Plant Bio @biorxiv-plants.bsky.social · 12/06/2025
Undermining the cry for help: The phytopathogenic fungus Verticillium dahliae secretes an antimicrobial effector protein to undermine host recruitment of antagonistic Pseudomonas bacteria www.biorxiv.org/content/10.1101/202…
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Team Thomma @teamthomma.bsky.social · 04/06/2025
📣 We have a postdoc position in fungus-microbiota interactions! Apply here: jobportal.uni-koeln.de/bewerben/2197 ⁩ For more details, visit: bewerbungsmanagement.uni-koeln.de/ausschreibun...
bewerbungsmanagement.uni-koeln.de
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Team Thomma @teamthomma.bsky.social · 04/04/2025
Last week, our newest @biorxiv-plants.bsky.social‬ preprint saw the light, led by @wolki95.bsky.social and co-directed by Kathrin Wippel (SILS, Amsterdam): A gnotobiotic system reveals multifunctional effector roles in plant-fungal pathogen dynamics www.biorxiv.org/content/10.1...
biorxiv.org
A gnotobiotic system reveals multifunctional effector roles in plant-fungal pathogen dynamics
Plants host diverse microbiota that influence physiological processes and can enhance resilience against invading pathogens that, in turn, evolved effector proteins to manipulate host microbiota in th...
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Reposted by Wilko Punt
Team Thomma @teamthomma.bsky.social · 10/01/2025
📣New year, new preprint @biorxiv-microbiol.bsky.social 🎉! A study led by the brilliant @yukiyosato.bsky.social showing that Starship giant transposons dominate plastic genomic regions in the fungal plant pathogen Verticillium dahliae and drive virulence evolution. 🧵[1/12] doi.org/10.1101/2025...
doi.org
Starship giant transposons dominate plastic genomic regions in a fungal plant pathogen and drive virulence evolution
Starships form a recently discovered superfamily of giant transposons in Pezizomycotina fungi, implicated in mediating horizontal transfer of diverse cargo genes between fungal genomes. Their elusive nature has long obscured their significance, and their impact on genome evolution remains poorly understood. Here, we reveal a surprising abundance and diversity of Starships in the phytopathogenic fungus Verticillium dahliae. Remarkably, Starships dominate the plastic genomic compartments involved in host colonization, are enriched in virulence-associated genes, and exhibit genetic and epigenetic characteristics associated with adaptive genome evolution. We further uncover extensive horizontal transfer of Starships between Verticillium species and, strikingly, from distantly related Fusarium fungi. Finally, we demonstrate how Starship activity facilitated the de novo formation of a novel virulence gene. Our findings illuminate the profound influence of Starship dynamics on fungal genome evolution and the development of virulence. ### Competing Interest Statement The authors have declared no competing interest.
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CEPLAS - Cluster of Excellence on Plant Sciences @ceplas.bsky.social · 12/12/2024
In our new issue of CEPLAS Kompakt Jinyi Zhu from @teamthomma.bsky.social gives us insights into his work on the exciting interplay between fungi, bacteria and plants!
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